Organism Overview: Desulfovibrio alaskensis


 
Dde_0001 protein networkhttps://string-db.org/network/207559.Dde_0001Chromosomal replication initiator DnaA domain-containing protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds [...]
Dde_0002 protein networkhttps://string-db.org/network/207559.Dde_0002SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: dvl:Dvul_0006 subunit beta; PFAM: DNA polymerase III, beta chain.
gyrB protein networkhttps://string-db.org/network/207559.Dde_0003DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
gyrA protein networkhttps://string-db.org/network/207559.Dde_0004DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
Dde_0005 protein networkhttps://string-db.org/network/207559.Dde_0005KEGG: dvm:DvMF_2085 putative lipoprotein.
Dde_0009 protein networkhttps://string-db.org/network/207559.Dde_0009PFAM: Methyltransferase type 11; KEGG: dvl:Dvul_0026 methyltransferase type 11.
hisS protein networkhttps://string-db.org/network/207559.Dde_0011TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: dvm:DvMF_2037 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding.
aspS protein networkhttps://string-db.org/network/207559.Dde_0012aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
def protein networkhttps://string-db.org/network/207559.Dde_0013Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
fmt protein networkhttps://string-db.org/network/207559.Dde_0014methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
Dde_0015 protein networkhttps://string-db.org/network/207559.Dde_0015PFAM: Protein of unknown function DUF116; KEGG: dvl:Dvul_0031 hypothetical protein.
Dde_0016 protein networkhttps://string-db.org/network/207559.Dde_0016PFAM: Protein of unknown function DUF116; KEGG: dvl:Dvul_0031 hypothetical protein.
Dde_0017 protein networkhttps://string-db.org/network/207559.Dde_0017PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; KEGG: dvu:DVU3363 sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
Dde_0019 protein networkhttps://string-db.org/network/207559.Dde_0019PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: drt:Dret_1391 DnaJ-like, subfamily C, member 28.
Dde_0020 protein networkhttps://string-db.org/network/207559.Dde_0020KEGG: dsa:Desal_0010 hypothetical protein.
Dde_0021 protein networkhttps://string-db.org/network/207559.Dde_0021PFAM: Mammalian cell entry related; KEGG: dma:DMR_00200 hypothetical protein.
Dde_0022 protein networkhttps://string-db.org/network/207559.Dde_0022Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dsa:Desal_0008 ABC transporter; SMART: ATPase, AAA+ type, core.
Dde_0023 protein networkhttps://string-db.org/network/207559.Dde_0023PFAM: Protein of unknown function DUF140; KEGG: dsa:Desal_0007 hypothetical protein.
Dde_0024 protein networkhttps://string-db.org/network/207559.Dde_0024KEGG: dsa:Desal_0006 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS.
Dde_0028 protein networkhttps://string-db.org/network/207559.Dde_0028D-glycero-D-manno-heptose-7-phosphate 1-kinase; PFAM: Carbohydrate/purine kinase; KEGG: dvl:Dvul_0034 ribokinase-like domain-containing protein.
Dde_0029 protein networkhttps://string-db.org/network/207559.Dde_0029TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: dvm:DvMF_2045 ParB-like partition protein; SMART: ParB-like nuclease; Belongs to the ParB family.
Dde_0030 protein networkhttps://string-db.org/network/207559.Dde_0030KEGG: dvm:DvMF_2046 hypothetical protein.
Dde_0031 protein networkhttps://string-db.org/network/207559.Dde_0031PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dvm:DvMF_2047 cobyrinic acid ac-diamide synthase.
Dde_0033 protein networkhttps://string-db.org/network/207559.Dde_0033UDP-N-acetylglucosamine 4-epimerase; KEGG: dvm:DvMF_2048 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_0036 protein networkhttps://string-db.org/network/207559.Dde_0036KEGG: dsa:Desal_3833 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
Dde_0037 protein networkhttps://string-db.org/network/207559.Dde_0037Protein of unknown function DUF107; PFAM: Nodulation efficiency, NfeD; KEGG: dma:DMR_00090 hypothetical membrane protein.
Dde_0038 protein networkhttps://string-db.org/network/207559.Dde_0038KEGG: dvu:DVU4021 hypothetical protein.
Dde_0039 protein networkhttps://string-db.org/network/207559.Dde_0039Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantoth [...]
Dde_0040 protein networkhttps://string-db.org/network/207559.Dde_0040KEGG: drt:Dret_2496 putative lipoprotein.
queA protein networkhttps://string-db.org/network/207559.Dde_0042S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (o [...]
Dde_0043 protein networkhttps://string-db.org/network/207559.Dde_0043Ferrodoxin-like protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dsa:Desal_3826 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_0044 protein networkhttps://string-db.org/network/207559.Dde_00442-oxoisovalerate oxidoreductase, beta subunit; KEGG: dvm:DvMF_2055 2-ketoisovalerate ferredoxin reductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal.
Dde_0045 protein networkhttps://string-db.org/network/207559.Dde_00452-oxoglutarate synthase; KEGG: dvl:Dvul_0046 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
Dde_0046 protein networkhttps://string-db.org/network/207559.Dde_0046PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dvm:DvMF_2057 pyruvate ferredoxin/flavodoxin oxidoreductase.
Dde_0047 protein networkhttps://string-db.org/network/207559.Dde_0047Radical SAM domain protein; KEGG: bvu:BVU_0006 putative DNA repair photolyase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_0048 protein networkhttps://string-db.org/network/207559.Dde_0048PFAM: UspA; KEGG: dba:Dbac_0701 UspA domain protein.
Dde_0050 protein networkhttps://string-db.org/network/207559.Dde_0050KEGG: dvl:Dvul_1035 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_0054 protein networkhttps://string-db.org/network/207559.Dde_0054Proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-ter [...]
pyrD protein networkhttps://string-db.org/network/207559.Dde_0056Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
Dde_0057 protein networkhttps://string-db.org/network/207559.Dde_0057PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: dvm:DvMF_2142 dihydroorotate oxidase B, electron transfer subunit.
Dde_0058 protein networkhttps://string-db.org/network/207559.Dde_0058PFAM: Peptidase U32; KEGG: dvl:Dvul_0074 peptidase U32.
Dde_0059 protein networkhttps://string-db.org/network/207559.Dde_0059PFAM: ADP-ribosylation/Crystallin J1; KEGG: dvm:DvMF_2112 ADP-ribosylation/crystallin J1.
Dde_0060 protein networkhttps://string-db.org/network/207559.Dde_0060KEGG: dvm:DvMF_2111 hypothetical protein.
der protein networkhttps://string-db.org/network/207559.Dde_0062GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) G [...]
Dde_0063 protein networkhttps://string-db.org/network/207559.Dde_0063KEGG: dvm:DvMF_2266 putative lipoprotein.
Dde_0064 protein networkhttps://string-db.org/network/207559.Dde_0064PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: dvm:DvMF_2267 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin.
ilvE protein networkhttps://string-db.org/network/207559.Dde_0065Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
dnaX protein networkhttps://string-db.org/network/207559.Dde_0066DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' [...]
Dde_0067 protein networkhttps://string-db.org/network/207559.Dde_0067Uncharacterized protein family UPF0133; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
recR protein networkhttps://string-db.org/network/207559.Dde_0068Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
Dde_0070 protein networkhttps://string-db.org/network/207559.Dde_0070KEGG: das:Daes_0976 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p.
Dde_0071 protein networkhttps://string-db.org/network/207559.Dde_0071KEGG: dal:Dalk_3922 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0073 protein networkhttps://string-db.org/network/207559.Dde_0073PFAM: Protein of unknown function DUF309; KEGG: glo:Glov_2144 protein of unknown function DUF309.
Dde_0074 protein networkhttps://string-db.org/network/207559.Dde_0074KEGG: dvl:Dvul_0185 TatD family hydrolase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related.
Dde_0075 protein networkhttps://string-db.org/network/207559.Dde_0075PFAM: Glycosyl transferase, group 1; KEGG: dvl:Dvul_0186 hypothetical protein.
mtnA protein networkhttps://string-db.org/network/207559.Dde_0076Methylthioribose salvage protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
Dde_0077 protein networkhttps://string-db.org/network/207559.Dde_0077TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: gme:Gmet_0840 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
trpB protein networkhttps://string-db.org/network/207559.Dde_0079Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
Dde_0081 protein networkhttps://string-db.org/network/207559.Dde_0081TIGRFAM: Iron hydrogenase, subset; KEGG: dma:DMR_12960 Fe hydrogenase large subunit; PFAM: Iron hydrogenase, large subunit, C-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
Dde_0082 protein networkhttps://string-db.org/network/207559.Dde_0082PFAM: Iron hydrogenase, small subunit-like; KEGG: dma:DMR_12950 Fe hydrogenase small subunit; SMART: Iron hydrogenase, small subunit-like.
Dde_0084 protein networkhttps://string-db.org/network/207559.Dde_0084Hypothetical protein.
Dde_0085 protein networkhttps://string-db.org/network/207559.Dde_0085Hypothetical protein; KEGG: bfr:BF2780 O-actetyl transferase related protein.
Dde_0086 protein networkhttps://string-db.org/network/207559.Dde_0086KEGG: vpa:VPA1591 dihydropteridine reductase; PFAM: Nitroreductase-like.
Dde_0087 protein networkhttps://string-db.org/network/207559.Dde_0087PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xau:Xaut_2757 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
Dde_0088 protein networkhttps://string-db.org/network/207559.Dde_0088KEGG: dsa:Desal_2654 hypothetical protein.
Dde_0089 protein networkhttps://string-db.org/network/207559.Dde_0089TIGRFAM: CoA enzyme activase; KEGG: dba:Dbac_1928 CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type.
Dde_0090 protein networkhttps://string-db.org/network/207559.Dde_0090PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: dba:Dbac_1927 2-hydroxyglutaryl-CoA dehydratase D-component.
Dde_0092 protein networkhttps://string-db.org/network/207559.Dde_0092Hydantoinaseoxoprolinase domain protein; PFAM: Hydantoinaseoxoprolinase, N-terminal; Hydantoinase/oxoprolinase; KEGG: dvl:Dvul_2933 hydantoinase/oxoprolinase.
Dde_0093 protein networkhttps://string-db.org/network/207559.Dde_0093KEGG: dvm:DvMF_2176 hypothetical protein.
Dde_0095 protein networkhttps://string-db.org/network/207559.Dde_0095PFAM: Putative rRNA methylase; KEGG: dvm:DvMF_2114 putative rRNA methylase.
Dde_0096 protein networkhttps://string-db.org/network/207559.Dde_0096KEGG: dvl:Dvul_0107 hypothetical protein.
Dde_0097 protein networkhttps://string-db.org/network/207559.Dde_0097PFAM: Protein of unknown function DUF939, bacterial; KEGG: dsa:Desal_2701 hypothetical protein.
Dde_0098 protein networkhttps://string-db.org/network/207559.Dde_0098PFAM: UspA; KEGG: dvm:DvMF_1409 UspA domain protein.
asnS protein networkhttps://string-db.org/network/207559.Dde_0099TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; KEGG: dvu:DVU0007 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-typ [...]
Dde_0102 protein networkhttps://string-db.org/network/207559.Dde_0102PFAM: Glutamine synthetase, catalytic region; KEGG: dvm:DvMF_1590 glutamine synthetase catalytic region.
Dde_0104 protein networkhttps://string-db.org/network/207559.Dde_0104TIGRFAM: Glutamine synthetase type I; KEGG: dvm:DvMF_2099 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp.
topA protein networkhttps://string-db.org/network/207559.Dde_0106DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
Dde_0107 protein networkhttps://string-db.org/network/207559.Dde_0107PFAM: Peptidase M48, Ste24p; KEGG: dvl:Dvul_0012 peptidase M48, Ste24p.
Dde_0108 protein networkhttps://string-db.org/network/207559.Dde_0108KEGG: dvm:DvMF_2067 hypothetical protein.
Dde_0109 protein networkhttps://string-db.org/network/207559.Dde_0109Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: dvu:DVU3381 transcriptional regulatory protein ZraR; PFAM: RNA polymerase sigma factor 54, interaction; Signal transd [...]
Dde_0110 protein networkhttps://string-db.org/network/207559.Dde_0110Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: dvm:DvMF_2148 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal tra [...]
Dde_0111 protein networkhttps://string-db.org/network/207559.Dde_0111KEGG: dvm:DvMF_2147 zinc resistance-associated protein.
Dde_0113 protein networkhttps://string-db.org/network/207559.Dde_0113Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precur [...]
ftsE protein networkhttps://string-db.org/network/207559.Dde_0114Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
Dde_0115 protein networkhttps://string-db.org/network/207559.Dde_0115Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
ilvD protein networkhttps://string-db.org/network/207559.Dde_0116TIGRFAM: Dihydroxy-acid dehydratase; KEGG: dvu:DVU3373 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
Dde_0119 protein networkhttps://string-db.org/network/207559.Dde_0119TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: dvm:DvMF_2264 DNA binding domain protein, excisionase family.
Dde_0120 protein networkhttps://string-db.org/network/207559.Dde_0120KEGG: dvm:DvMF_2024 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RluA family.
Dde_0121 protein networkhttps://string-db.org/network/207559.Dde_0121KEGG: dvm:DvMF_2025 hypothetical protein.
Dde_0122 protein networkhttps://string-db.org/network/207559.Dde_0122Putative 23S rRNA m(5)C methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: dvu:DVU3189 NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methy [...]
cysQ protein networkhttps://string-db.org/network/207559.Dde_01233'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
Dde_0124 protein networkhttps://string-db.org/network/207559.Dde_0124PFAM: NLP/P60; KEGG: dsa:Desal_3232 NLP/P60 protein.
Dde_0125 protein networkhttps://string-db.org/network/207559.Dde_0125KEGG: dvl:Dvul_0200 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
Dde_0126 protein networkhttps://string-db.org/network/207559.Dde_0126KEGG: dvm:DvMF_2030 MerR family transcriptional regulator.
Dde_0127 protein networkhttps://string-db.org/network/207559.Dde_0127PdxA-like dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vi [...]
Dde_0128 protein networkhttps://string-db.org/network/207559.Dde_0128PFAM: Protein of unknown function, DUF1537; KEGG: pjd:Pjdr2_3637 type III effector Hrp-dependent outers.
Dde_0129 protein networkhttps://string-db.org/network/207559.Dde_0129PFAM: 2-keto-3-deoxygluconate permease; KEGG: asu:Asuc_0447 2-keto-3-deoxygluconate permease.
Dde_0130 protein networkhttps://string-db.org/network/207559.Dde_0130KEGG: dda:Dd703_2190 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N [...]
Dde_0132 protein networkhttps://string-db.org/network/207559.Dde_0132PFAM: Protein of unknown function DUF318, transmembrane; KEGG: dvu:DVU3386 permease.
Dde_0133 protein networkhttps://string-db.org/network/207559.Dde_0133Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core fo [...]
ade protein networkhttps://string-db.org/network/207559.Dde_0136TIGRFAM: Adenine deaminase; KEGG: dba:Dbac_1063 adenine deaminase; PFAM: Amidohydrolase 1; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
Dde_0137 protein networkhttps://string-db.org/network/207559.Dde_0137ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: drm:Dred_2174 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0138 protein networkhttps://string-db.org/network/207559.Dde_0138ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: mta:Moth_1951 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0139 protein networkhttps://string-db.org/network/207559.Dde_0139Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dsa:Desal_2448 ABC transporter; SMART: ATPase, AAA+ type, core.
Dde_0140 protein networkhttps://string-db.org/network/207559.Dde_0140PFAM: Phosphoribosyltransferase; KEGG: dra:DR_0878 adenine phosphoribosyltransferase.
Dde_0141 protein networkhttps://string-db.org/network/207559.Dde_0141PFAM: Basic membrane lipoprotein; KEGG: ssm:Spirs_2769 basic membrane lipoprotein.
Dde_0145 protein networkhttps://string-db.org/network/207559.Dde_0145PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: drt:Dret_1852 substrate-binding region of ABC-type glycine betaine transport system.
Dde_0146 protein networkhttps://string-db.org/network/207559.Dde_0146PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: drt:Dret_1852 substrate-binding region of ABC-type glycine betaine transport system.
ubiX protein networkhttps://string-db.org/network/207559.Dde_01503-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylas [...]
Dde_0151 protein networkhttps://string-db.org/network/207559.Dde_0151Beta-lactamase domain protein; SMART: Beta-lactamase-like; KEGG: dvl:Dvul_0081 beta-lactamase domain-containing protein; Belongs to the UPF0173 family.
Dde_0152 protein networkhttps://string-db.org/network/207559.Dde_0152KEGG: dvm:DvMF_2125 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-te [...]
Dde_0153 protein networkhttps://string-db.org/network/207559.Dde_0153KEGG: dol:Dole_0215 hypothetical protein.
Dde_0154 protein networkhttps://string-db.org/network/207559.Dde_0154Molybdenum ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0464 molybdenum ABC transporter permease.
Dde_0155 protein networkhttps://string-db.org/network/207559.Dde_0155TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; KEGG: dsa:Desal_0303 molybdenum ABC transporter periplasmic molybdate-binding protein.
Dde_0157 protein networkhttps://string-db.org/network/207559.Dde_0157KEGG: dvm:DvMF_2175 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regula [...]
Dde_0158 protein networkhttps://string-db.org/network/207559.Dde_0158AzlC family protein; PFAM: AzlC-like; KEGG: drt:Dret_1470 AzlC family protein.
Dde_0159 protein networkhttps://string-db.org/network/207559.Dde_0159PFAM: Branched-chain amino acid transport; KEGG: dsa:Desal_3217 branched-chain amino acid ABC transporter.
Dde_0160 protein networkhttps://string-db.org/network/207559.Dde_0160KEGG: dsa:Desal_2219 signal transduction histidine kinase LytS; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane [...]
Dde_0161 protein networkhttps://string-db.org/network/207559.Dde_0161KEGG: dsa:Desal_2218 LytR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: LytTr DNA-binding region; Signal transd [...]
Dde_0163 protein networkhttps://string-db.org/network/207559.Dde_0163PFAM: DSBA oxidoreductase; KEGG: dvl:Dvul_2927 DsbA oxidoreductase.
Dde_0166 protein networkhttps://string-db.org/network/207559.Dde_0166Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvl:Dvul_2857 ABC transporter; SMART: ATPase, AAA+ type, core.
Dde_0167 protein networkhttps://string-db.org/network/207559.Dde_0167KEGG: dvm:DvMF_1919 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
Dde_0168 protein networkhttps://string-db.org/network/207559.Dde_0168ABC-type transporter, periplasmic subunit family 3; KEGG: dvm:DvMF_1918 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular s [...]
Dde_0171 protein networkhttps://string-db.org/network/207559.Dde_0171KEGG: dvl:Dvul_0177 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
plsY protein networkhttps://string-db.org/network/207559.Dde_0172Membrane protein YgiH; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosph [...]
Dde_0173 protein networkhttps://string-db.org/network/207559.Dde_0173PFAM: Ribonuclease II/R; KEGG: dvm:DvMF_1943 ribonuclease II.
Dde_0174 protein networkhttps://string-db.org/network/207559.Dde_0174PFAM: AICARFT/IMPCHase bienzyme, formylation region; KEGG: dvu:DVU3206 phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, formylation region.
Dde_0175 protein networkhttps://string-db.org/network/207559.Dde_0175Transglycosylase, Slt family; PFAM: Lytic transglycosylase-like, catalytic; KEGG: dvl:Dvul_0182 lytic transglycosylase, catalytic.
purA protein networkhttps://string-db.org/network/207559.Dde_0176Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
Dde_0177 protein networkhttps://string-db.org/network/207559.Dde_0177KEGG: dvu:DVU3203 DNA polymerase III subunit delta'.
Dde_0178 protein networkhttps://string-db.org/network/207559.Dde_0178KEGG: dvm:DvMF_1937 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0179 protein networkhttps://string-db.org/network/207559.Dde_0179TIGRFAM: DNA photolyase, class 2; KEGG: dvl:Dvul_2851 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
Dde_0180 protein networkhttps://string-db.org/network/207559.Dde_0180KEGG: dvl:Dvul_2852 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0181 protein networkhttps://string-db.org/network/207559.Dde_0181KEGG: dvu:DVU0297 hypothetical protein.
Dde_0182 protein networkhttps://string-db.org/network/207559.Dde_0182KEGG: dvm:DvMF_1567 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
Dde_0183 protein networkhttps://string-db.org/network/207559.Dde_0183KEGG: dps:DP1028 glutamine ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport [...]
Dde_0184 protein networkhttps://string-db.org/network/207559.Dde_0184Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_1569 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0185 protein networkhttps://string-db.org/network/207559.Dde_0185KEGG: dps:DP1030 amino acid ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport [...]
Dde_0186 protein networkhttps://string-db.org/network/207559.Dde_0186ABC-type transporter, periplasmic subunit family 3; KEGG: dvl:Dvul_2548 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-bin [...]
Dde_0187 protein networkhttps://string-db.org/network/207559.Dde_0187KEGG: dvm:DvMF_1572 flavin reductase domain protein FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding.
Dde_0188 protein networkhttps://string-db.org/network/207559.Dde_0188PFAM: GCN5-related N-acetyltransferase; KEGG: das:Daes_0846 GCN5-like N-acetyltransferase.
Dde_0189 protein networkhttps://string-db.org/network/207559.Dde_0189Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Protein of unknown function DUF160; KEGG: dsa:Desal_3316 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM.
Dde_0193 protein networkhttps://string-db.org/network/207559.Dde_0193KEGG: dvm:DvMF_2243 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
Dde_0194 protein networkhttps://string-db.org/network/207559.Dde_0194KEGG: dvl:Dvul_0264 stress responsive alpha-beta barrel domain-containing protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel.
serS protein networkhttps://string-db.org/network/207559.Dde_0196seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
Dde_0197 protein networkhttps://string-db.org/network/207559.Dde_0197KEGG: dvm:DvMF_2225 hypothetical protein.
Dde_0202 protein networkhttps://string-db.org/network/207559.Dde_0202PFAM: Class I peptide chain release factor; KEGG: dsa:Desal_0067 class I peptide chain release factor.
Dde_0203 protein networkhttps://string-db.org/network/207559.Dde_0203PFAM: Type IV pilus assembly PilZ; KEGG: dvl:Dvul_2738 type IV pilus assembly PilZ.
Dde_0204 protein networkhttps://string-db.org/network/207559.Dde_0204PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dvl:Dvul_2737 dinitrogenase iron-molybdenum cofactor biosynthesis.
Dde_0205 protein networkhttps://string-db.org/network/207559.Dde_0205PFAM: SEC-C motif; KEGG: dvl:Dvul_2736 SecC motif-containing protein.
Dde_0206 protein networkhttps://string-db.org/network/207559.Dde_0206KEGG: dvm:DvMF_2258 hypothetical protein.
Dde_0207 protein networkhttps://string-db.org/network/207559.Dde_0207Hypothetical protein.
Dde_0208 protein networkhttps://string-db.org/network/207559.Dde_0208Lysine transporter from the Na+/H+ antiporter superfamily; PFAM: Na+/H+ antiporter NhaC-like; KEGG: dps:DP1702 hypothetical protein.
Dde_0209 protein networkhttps://string-db.org/network/207559.Dde_0209Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PP [...]
Dde_0210 protein networkhttps://string-db.org/network/207559.Dde_0210KEGG: dvu:DVU0283 AhpF family protein/thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
Dde_0211 protein networkhttps://string-db.org/network/207559.Dde_0211Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; PAS fold-4; KEGG: dvl:Dvul_2629 diguanylate cyclase with PAS [...]
Dde_0212 protein networkhttps://string-db.org/network/207559.Dde_0212TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: NUDIX hydrolase domain; HhH-GPD domain; Helix-hairpin-helix motif; KEGG: dvu:DVU0282 A/G-specific adenine glycosylase; SMART: [...]
Dde_0213 protein networkhttps://string-db.org/network/207559.Dde_0213Polyamine-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: drt:Dret_2121 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC tr [...]
Dde_0214 protein networkhttps://string-db.org/network/207559.Dde_0214PFAM: Aminoglycoside phosphotransferase; KEGG: drt:Dret_2120 hypothetical protein.
Dde_0215 protein networkhttps://string-db.org/network/207559.Dde_0215KEGG: dvm:DvMF_1927 glycosyl transferase family 2.
Dde_0216 protein networkhttps://string-db.org/network/207559.Dde_0216PFAM: Amine oxidase; KEGG: dvu:DVU0295 amine oxidase, flavin-containing.
Dde_0217 protein networkhttps://string-db.org/network/207559.Dde_0217PFAM: Peptidase M24, structural domain; Creatinase; KEGG: dvm:DvMF_1929 peptidase M24.
Dde_0218 protein networkhttps://string-db.org/network/207559.Dde_0218KEGG: dma:DMR_16200 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP [...]
Dde_0220 protein networkhttps://string-db.org/network/207559.Dde_0220KEGG: dvm:DvMF_0627 Sel1 domain protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like.
Dde_0221 protein networkhttps://string-db.org/network/207559.Dde_0221KEGG: dvm:DvMF_0626 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0222 protein networkhttps://string-db.org/network/207559.Dde_0222PFAM: Protein of unknown function DUF1641; KEGG: dvl:Dvul_1202 hypothetical protein.
Dde_0223 protein networkhttps://string-db.org/network/207559.Dde_0223PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: dvm:DvMF_0624 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
Dde_0224 protein networkhttps://string-db.org/network/207559.Dde_0224KEGG: dvl:Dvul_1204 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
Dde_0225 protein networkhttps://string-db.org/network/207559.Dde_0225PFAM: Protein of unknown function DUF748; KEGG: das:Daes_0926 hypothetical protein.
Dde_0227 protein networkhttps://string-db.org/network/207559.Dde_0227PFAM: Carbon starvation protein CstA; KEGG: dba:Dbac_2399 carbon starvation protein CstA.
tyrS protein networkhttps://string-db.org/network/207559.Dde_0228Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
Dde_0229 protein networkhttps://string-db.org/network/207559.Dde_0229TIGRFAM: Conserved hypothetical protein CHP00282; KEGG: dvl:Dvul_2034 metallophosphoesterase.
Dde_0230 protein networkhttps://string-db.org/network/207559.Dde_0230Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Dde_0232 protein networkhttps://string-db.org/network/207559.Dde_0232Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dsa:Desal_2874 ABC transporter; SMART: ATPase, AAA+ type, core.
Dde_0233 protein networkhttps://string-db.org/network/207559.Dde_0233ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_2875 binding-protein-dependent transport systems inner [...]
Dde_0234 protein networkhttps://string-db.org/network/207559.Dde_0234KEGG: das:Daes_1323 ABC transporter periplasmic substrate-binding protein.
Dde_0235 protein networkhttps://string-db.org/network/207559.Dde_0235KEGG: dsa:Desal_0351 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
Dde_0236 protein networkhttps://string-db.org/network/207559.Dde_0236KEGG: dvl:Dvul_2879 NAD-dependent epimerase/dehydratase.
Dde_0237 protein networkhttps://string-db.org/network/207559.Dde_0237GPR1/FUN34/yaaH family protein; PFAM: GPR1/FUN34/yaaH; KEGG: dsa:Desal_0840 GPR1/FUN34/YaaH family protein.
Dde_0239 protein networkhttps://string-db.org/network/207559.Dde_0239Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction response regulator, receiver region; Signal transduction hist [...]
fumC protein networkhttps://string-db.org/network/207559.Dde_0240Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily [...]
Dde_0241 protein networkhttps://string-db.org/network/207559.Dde_0241ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: dvm:DvMF_1101 extracellular solute-binding protein family 3.
Dde_0243 protein networkhttps://string-db.org/network/207559.Dde_0243PFAM: Peptidase M23; KEGG: dvl:Dvul_0148 peptidase M23B.
Dde_0244 protein networkhttps://string-db.org/network/207559.Dde_0244PP-loop domain protein; PFAM: PP-loop; KEGG: dvl:Dvul_0147 PP-loop domain-containing protein.
Dde_0246 protein networkhttps://string-db.org/network/207559.Dde_0246KEGG: dsa:Desal_2589 hypothetical protein.
rpoZ protein networkhttps://string-db.org/network/207559.Dde_0247DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and al [...]
dnaJ protein networkhttps://string-db.org/network/207559.Dde_0248Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
moaC protein networkhttps://string-db.org/network/207559.Dde_0249Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC fami [...]
Dde_0250 protein networkhttps://string-db.org/network/207559.Dde_0250KEGG: dvu:DVU3052 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_0251 protein networkhttps://string-db.org/network/207559.Dde_0251PFAM: NUDIX hydrolase domain; KEGG: dvm:DvMF_2380 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
Dde_0252 protein networkhttps://string-db.org/network/207559.Dde_0252PFAM: Protein of unknown function DUF606; KEGG: dvm:DvMF_2381 protein of unknown function DUF606.
Dde_0253 protein networkhttps://string-db.org/network/207559.Dde_0253Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; KEGG: dvl:Dvul_0327 hemerythrin-like metal-binding protein.
asd protein networkhttps://string-db.org/network/207559.Dde_0254Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
Dde_0255 protein networkhttps://string-db.org/network/207559.Dde_0255PFAM: Aminotransferase, class IV; KEGG: dvm:DvMF_2383 aminotransferase class IV.
Dde_0256 protein networkhttps://string-db.org/network/207559.Dde_0256PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_2384 glycosyl transferase group 1.
Dde_0257 protein networkhttps://string-db.org/network/207559.Dde_0257KEGG: dvl:Dvul_0331 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold- [...]
Dde_0258 protein networkhttps://string-db.org/network/207559.Dde_0258PFAM: Extracellular ligand-binding receptor; KEGG: dvu:DVU0712 amino acid ABC transporter periplasmic-binding protein.
Dde_0259 protein networkhttps://string-db.org/network/207559.Dde_0259ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_3207 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0260 protein networkhttps://string-db.org/network/207559.Dde_0260ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dvl:Dvul_2252 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0261 protein networkhttps://string-db.org/network/207559.Dde_0261Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2753 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0262 protein networkhttps://string-db.org/network/207559.Dde_0262Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2754 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0263 protein networkhttps://string-db.org/network/207559.Dde_0263KEGG: vsp:VS_1816 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; MASE1; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_0264 protein networkhttps://string-db.org/network/207559.Dde_0264KEGG: dvm:DvMF_2397 hypothetical protein.
Dde_0265 protein networkhttps://string-db.org/network/207559.Dde_0265PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dpr:Despr_1763 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein.
Dde_0266 protein networkhttps://string-db.org/network/207559.Dde_0266PFAM: GCN5-related N-acetyltransferase; KEGG: dba:Dbac_3344 GCN5-related N-acetyltransferase.
Dde_0267 protein networkhttps://string-db.org/network/207559.Dde_0267Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich region, CCG; KEGG: dat:HRM2_12820 iron-sulfur cluster-binding protein.
Dde_0269 protein networkhttps://string-db.org/network/207559.Dde_0269Bifunctional transpeptidase/transglycosylase; TIGRFAM: Penicillin-binding protein 1C; KEGG: azl:AZL_011020 penicillin binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding [...]
Dde_0270 protein networkhttps://string-db.org/network/207559.Dde_0270Alpha-2-macroglobulin domain protein; PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; KEGG: azl:AZL_011010 hypothetical protein.
Dde_0271 protein networkhttps://string-db.org/network/207559.Dde_0271SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dvl:Dvul_2803 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: [...]
Dde_0272 protein networkhttps://string-db.org/network/207559.Dde_0272SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dvl:Dvul_2802 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: [...]
Dde_0273 protein networkhttps://string-db.org/network/207559.Dde_0273ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1827 binding-protein-dependent transport systems inner [...]
Dde_0274 protein networkhttps://string-db.org/network/207559.Dde_0274ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1828 binding-protein-dependent transport systems inner [...]
Dde_0275 protein networkhttps://string-db.org/network/207559.Dde_0275ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dsa:Desal_2969 extracellular solute-binding protein family 5.
Dde_0276 protein networkhttps://string-db.org/network/207559.Dde_0276Cystathionine beta-lyase; KEGG: dal:Dalk_4468 aminotransferase class I and II; PFAM: Aminotransferase, class I/II.
Dde_0277 protein networkhttps://string-db.org/network/207559.Dde_0277KEGG: dvl:Dvul_2681 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic.
Dde_0278 protein networkhttps://string-db.org/network/207559.Dde_0278Anaerobic ribonucleoside-triphosphate reductase activating enzyme; PFAM: Radical SAM; KEGG: dvm:DvMF_1818 radical SAM domain protein.
Dde_0281 protein networkhttps://string-db.org/network/207559.Dde_0281PFAM: CheC-like protein; KEGG: dvl:Dvul_2679 chemotaxis protein CheX.
Dde_0282 protein networkhttps://string-db.org/network/207559.Dde_0282KEGG: dvm:DvMF_1816 TPR repeat-containing protein.
Dde_0283 protein networkhttps://string-db.org/network/207559.Dde_0283KEGG: dvl:Dvul_2677 hypothetical protein.
Dde_0284 protein networkhttps://string-db.org/network/207559.Dde_0284PFAM: Protein of unknown function DUF1007; KEGG: dsa:Desal_0127 ABC transporter periplasmic protein.
Dde_0285 protein networkhttps://string-db.org/network/207559.Dde_0285PFAM: Nickel/cobalt transporter, high-affinity; KEGG: das:Daes_0361 hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
Dde_0286 protein networkhttps://string-db.org/network/207559.Dde_0286PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_2676 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_0287 protein networkhttps://string-db.org/network/207559.Dde_0287KEGG: dvm:DvMF_1813 hypothetical protein.
Dde_0288 protein networkhttps://string-db.org/network/207559.Dde_0288KEGG: dvl:Dvul_2661 hypothetical protein.
Dde_0289 protein networkhttps://string-db.org/network/207559.Dde_0289Proprionate catabolism activator, Fis family; KEGG: mta:Moth_0725 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response reg [...]
Dde_0291 protein networkhttps://string-db.org/network/207559.Dde_0291PFAM: Cytochrome c, class I; KEGG: drt:Dret_0454 cytochrome c family protein.
Dde_0292 protein networkhttps://string-db.org/network/207559.Dde_0292KEGG: dvl:Dvul_0758 hypothetical protein.
Dde_0293 protein networkhttps://string-db.org/network/207559.Dde_0293PFAM: Polyketide cyclase/dehydrase; KEGG: afr:AFE_2804 hypothetical protein.
coaX protein networkhttps://string-db.org/network/207559.Dde_0294Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
eno protein networkhttps://string-db.org/network/207559.Dde_0295Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
folD protein networkhttps://string-db.org/network/207559.Dde_0296Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofo [...]
Dde_0298 protein networkhttps://string-db.org/network/207559.Dde_0298Flagellar hook-basal body protein; KEGG: dvm:DvMF_1808 protein of unknown function DUF1078 domain protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function D [...]
Dde_0299 protein networkhttps://string-db.org/network/207559.Dde_0299PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: dal:Dalk_3571 NapC/NirT cytochrome c domain protein.
Dde_0300 protein networkhttps://string-db.org/network/207559.Dde_0300KEGG: dal:Dalk_2563 hypothetical protein.
Dde_0301 protein networkhttps://string-db.org/network/207559.Dde_0301PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvm:DvMF_1807 protein of unknown function DUF6 transmembrane.
Dde_0303 protein networkhttps://string-db.org/network/207559.Dde_0303PFAM: ROSMUCR transcriptional regulator; KEGG: dvm:DvMF_0974 transcriptional regulator, MucR family.
Dde_0304 protein networkhttps://string-db.org/network/207559.Dde_0304PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvm:DvMF_1805 glyoxalase/bleomycin resistance protein/dioxygenase.
Dde_0305 protein networkhttps://string-db.org/network/207559.Dde_0305PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_0285 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
Dde_0306 protein networkhttps://string-db.org/network/207559.Dde_0306Redoxin domain protein; PFAM: Redoxin; KEGG: dvu:DVU3076 hypothetical protein.
Dde_0307 protein networkhttps://string-db.org/network/207559.Dde_0307Predicted 23S rRNA-ribose 2'-O-methyltransferase; KEGG: dvm:DvMF_2347 hypothetical protein.
Dde_0308 protein networkhttps://string-db.org/network/207559.Dde_0308KEGG: dvm:DvMF_2348 binding-protein-dependent transport systems inner membrane component.
Dde_0309 protein networkhttps://string-db.org/network/207559.Dde_0309ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2349 binding-protein-dependent transport systems inner [...]
Dde_0310 protein networkhttps://string-db.org/network/207559.Dde_0310KEGG: mgm:Mmc1_3482 Cl-channel, voltage-gated family protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
Dde_0312 protein networkhttps://string-db.org/network/207559.Dde_0312PFAM: FAD linked oxidase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; FAD-linked oxidase, C-terminal; KEGG: dvl:Dvul_0306 FAD linked oxidase domain-c [...]
Dde_0314 protein networkhttps://string-db.org/network/207559.Dde_0314Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
mltG protein networkhttps://string-db.org/network/207559.Dde_0315Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG fam [...]
Dde_0318 protein networkhttps://string-db.org/network/207559.Dde_0318PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold-4; Helix-turn-helix, Fis-type; KEGG: dvm:DvMF_1213 [...]
Dde_0319 protein networkhttps://string-db.org/network/207559.Dde_0319KEGG: dvm:DvMF_1212 hypothetical protein.
Dde_0320 protein networkhttps://string-db.org/network/207559.Dde_0320KEGG: sfu:Sfum_0651 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacc [...]
Dde_0321 protein networkhttps://string-db.org/network/207559.Dde_0321KEGG: dvm:DvMF_1769 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0322 protein networkhttps://string-db.org/network/207559.Dde_0322SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: sfu:Sfum_0655 hypothetical protein.
Dde_0323 protein networkhttps://string-db.org/network/207559.Dde_0323KEGG: dvm:DvMF_1211 response regulator receiver protein.
Dde_0324 protein networkhttps://string-db.org/network/207559.Dde_0324KEGG: tye:THEYE_A0739 response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0325 protein networkhttps://string-db.org/network/207559.Dde_0325KEGG: dsa:Desal_3507 CBS domain containing protein.
Dde_0326 protein networkhttps://string-db.org/network/207559.Dde_0326PFAM: Sodium/sulphate symporter; KEGG: das:Daes_1093 sodium/sulphate symporter.
Dde_0327 protein networkhttps://string-db.org/network/207559.Dde_0327Response regulator receiver protein; KEGG: dat:HRM2_40310 sigma-54 dependent two component transcriptional regulator (fis family protein); PFAM: Signal transduction response regulator, receiver r [...]
Dde_0328 protein networkhttps://string-db.org/network/207559.Dde_0328KEGG: das:Daes_0066 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0329 protein networkhttps://string-db.org/network/207559.Dde_0329PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0456 acetyltransferase.
hisF protein networkhttps://string-db.org/network/207559.Dde_0331Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that p [...]
hisH protein networkhttps://string-db.org/network/207559.Dde_0332Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydroly [...]
carB protein networkhttps://string-db.org/network/207559.Dde_0333SMART: MGS-like; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: dvm:DvMF_2306 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, [...]
purF protein networkhttps://string-db.org/network/207559.Dde_0334Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
Dde_0335 protein networkhttps://string-db.org/network/207559.Dde_0335KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ; KEGG: dvm:DvMF_2308 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; Belongs to the SIS family. GutQ/KpsF su [...]
Dde_0336 protein networkhttps://string-db.org/network/207559.Dde_0336PFAM: Thioesterase superfamily; KEGG: dvm:DvMF_2309 thioesterase superfamily protein.
Dde_0337 protein networkhttps://string-db.org/network/207559.Dde_0337PFAM: Glycosyl transferase, family 2; KEGG: dvu:DVU3287 glycosyl transferase group 2 family protein.
Dde_0339 protein networkhttps://string-db.org/network/207559.Dde_0339PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: dvm:DvMF_2250 aromatic hydrocarbon degradation membrane protein.
Dde_0340 protein networkhttps://string-db.org/network/207559.Dde_0340KEGG: dvm:DvMF_2251 hypothetical protein.
Dde_0341 protein networkhttps://string-db.org/network/207559.Dde_0341KEGG: dvm:DvMF_2252 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA hel [...]
Dde_0342 protein networkhttps://string-db.org/network/207559.Dde_0342KEGG: dsa:Desal_1524 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core.
cbiA protein networkhttps://string-db.org/network/207559.Dde_0343Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen so [...]
Dde_0344 protein networkhttps://string-db.org/network/207559.Dde_0344KEGG: dvm:DvMF_2255 hypothetical protein.
Dde_0346 protein networkhttps://string-db.org/network/207559.Dde_0346PFAM: ROSMUCR transcriptional regulator; KEGG: dvm:DvMF_2256 transcriptional regulator, MucR family.
Dde_0347 protein networkhttps://string-db.org/network/207559.Dde_0347KEGG: dvl:Dvul_0296 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_0348 protein networkhttps://string-db.org/network/207559.Dde_0348PFAM: Transmembrane pair, bacterial; KEGG: dvl:Dvul_2673 transmembrane pair domain-containing protein.
Dde_0349 protein networkhttps://string-db.org/network/207559.Dde_0349PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: reu:Reut_A0567 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
Dde_0350 protein networkhttps://string-db.org/network/207559.Dde_0350SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; KEGG: dvl:Dvul_2671 flagellar protein export ATPase FliI; PFAM: ATPas [...]
Dde_0351 protein networkhttps://string-db.org/network/207559.Dde_0351KEGG: dvl:Dvul_2670 flagellar assembly protein FliH.
Dde_0352 protein networkhttps://string-db.org/network/207559.Dde_0352KEGG: dvm:DvMF_2288 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; Magnesium transporter, MgtE intracellular region.
Dde_0353 protein networkhttps://string-db.org/network/207559.Dde_0353Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
fliE protein networkhttps://string-db.org/network/207559.Dde_0354KEGG: dvl:Dvul_2667 flagellar hook-basal body complex subunit FliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE.
Dde_0355 protein networkhttps://string-db.org/network/207559.Dde_0355KEGG: dvl:Dvul_2666 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, [...]
Dde_0356 protein networkhttps://string-db.org/network/207559.Dde_0356Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
Dde_0357 protein networkhttps://string-db.org/network/207559.Dde_0357KEGG: dvm:DvMF_2283 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
Dde_0358 protein networkhttps://string-db.org/network/207559.Dde_0358UDP-glucose 4-epimerase; KEGG: dvm:DvMF_2280 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_0359 protein networkhttps://string-db.org/network/207559.Dde_0359TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: gur:Gura_4087 carbonic anhydrase.
Dde_0360 protein networkhttps://string-db.org/network/207559.Dde_0360PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: dsa:Desal_3620 polysaccharide biosynthesis protein CapD.
Dde_0361 protein networkhttps://string-db.org/network/207559.Dde_0361PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dsa:Desal_3619 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
Dde_0362 protein networkhttps://string-db.org/network/207559.Dde_0362PFAM: Bacterial sugar transferase; Glycosyl transferase, group 1; KEGG: dsa:Desal_3614 glycosyl transferase group 1.
Dde_0363 protein networkhttps://string-db.org/network/207559.Dde_0363KEGG: dvm:DvMF_2277 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related pro [...]
Dde_0364 protein networkhttps://string-db.org/network/207559.Dde_0364KEGG: dvl:Dvul_2657 hydrogenase formation HypD protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; Belongs to the HypD family.
Dde_0365 protein networkhttps://string-db.org/network/207559.Dde_0365KEGG: dvl:Dvul_2650 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
ddl protein networkhttps://string-db.org/network/207559.Dde_0366D-alanine/D-alanine ligase; Cell wall formation.
Dde_0367 protein networkhttps://string-db.org/network/207559.Dde_0367Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue [...]
Dde_0369 protein networkhttps://string-db.org/network/207559.Dde_0369KEGG: dma:DMR_12590 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP [...]
Dde_0370 protein networkhttps://string-db.org/network/207559.Dde_0370Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold; HAMP linker domain; Signal transducti [...]
Dde_0371 protein networkhttps://string-db.org/network/207559.Dde_0371ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: chy:CHY_1128 oligopeptide/dipeptide ABC transporter peptide-binding protein.
Dde_0372 protein networkhttps://string-db.org/network/207559.Dde_0372KEGG: dvm:DvMF_2272 hypothetical protein.
Dde_0373 protein networkhttps://string-db.org/network/207559.Dde_0373KEGG: dvl:Dvul_0149 phosphoesterase, PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
Dde_0374 protein networkhttps://string-db.org/network/207559.Dde_0374CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulfide oxidored [...]
hflX protein networkhttps://string-db.org/network/207559.Dde_0376GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPas [...]
Dde_0377 protein networkhttps://string-db.org/network/207559.Dde_0377KEGG: dvm:DvMF_1946 phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: MGS-like; AICARFT/IMPCHase bienzyme, formylation region.
Dde_0378 protein networkhttps://string-db.org/network/207559.Dde_0378Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
flhB protein networkhttps://string-db.org/network/207559.Dde_0379Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of [...]
flhA protein networkhttps://string-db.org/network/207559.Dde_0380Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs [...]
Dde_0381 protein networkhttps://string-db.org/network/207559.Dde_0381PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: dvm:DvMF_2013 flagellar biosynthesis protein FlhF, putative.
Dde_0382 protein networkhttps://string-db.org/network/207559.Dde_0382PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dvm:DvMF_2012 cobyrinic acid ac-diamide synthase.
Dde_0383 protein networkhttps://string-db.org/network/207559.Dde_0383KEGG: dvm:DvMF_2011 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase s [...]
Dde_0384 protein networkhttps://string-db.org/network/207559.Dde_0384KEGG: dvm:DvMF_2010 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0385 protein networkhttps://string-db.org/network/207559.Dde_0385Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
Dde_0386 protein networkhttps://string-db.org/network/207559.Dde_0386KEGG: dvm:DvMF_2008 hypothetical protein.
Dde_0387 protein networkhttps://string-db.org/network/207559.Dde_0387KEGG: dvm:DvMF_2007 hypothetical protein.
Dde_0388 protein networkhttps://string-db.org/network/207559.Dde_0388KEGG: das:Daes_1357 hypothetical protein.
Dde_0389 protein networkhttps://string-db.org/network/207559.Dde_0389Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; B [...]
ispH protein networkhttps://string-db.org/network/207559.Dde_0390Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl [...]
Dde_0391 protein networkhttps://string-db.org/network/207559.Dde_0391KEGG: dvu:DVU0056 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, rece [...]
Dde_0392 protein networkhttps://string-db.org/network/207559.Dde_0392KEGG: dma:DMR_26870 hypothetical protein.
Dde_0393 protein networkhttps://string-db.org/network/207559.Dde_0393KEGG: dsa:Desal_2816 hypothetical protein.
Dde_0394 protein networkhttps://string-db.org/network/207559.Dde_0394PFAM: Glycosyl transferase, group 1; KEGG: ica:Intca_3044 mannose-6-phosphate isomerase, type 2.
Dde_0395 protein networkhttps://string-db.org/network/207559.Dde_0395ABC-type transporter, periplasmic subunit family 3; KEGG: mmw:Mmwyl1_4039 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-b [...]
Dde_0396 protein networkhttps://string-db.org/network/207559.Dde_0396KEGG: mmw:Mmwyl1_4040 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dep [...]
Dde_0398 protein networkhttps://string-db.org/network/207559.Dde_0398TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: dvl:Dvul_2624 acetolactate synthase catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiam [...]
Dde_0399 protein networkhttps://string-db.org/network/207559.Dde_0399PFAM: Amino acid-binding ACT; KEGG: dvu:DVU0361 acetolactate synthase 1 regulatory subunit.
Dde_0400 protein networkhttps://string-db.org/network/207559.Dde_0400KEGG: dbr:Deba_0020 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
Dde_0401 protein networkhttps://string-db.org/network/207559.Dde_0401KEGG: dbr:Deba_0021 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein.
Dde_0402 protein networkhttps://string-db.org/network/207559.Dde_0402KEGG: dbr:Deba_0022 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_0403 protein networkhttps://string-db.org/network/207559.Dde_0403Regulatory protein MarR; KEGG: dal:Dalk_3417 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
Dde_0404 protein networkhttps://string-db.org/network/207559.Dde_0404KEGG: dvl:Dvul_3076 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial.
Dde_0407 protein networkhttps://string-db.org/network/207559.Dde_0407Transcriptional regulator, DeoR family; PFAM: Putative sugar-binding region; KEGG: dvm:DvMF_0812 transcriptional regulator, DeoR family.
Dde_0408 protein networkhttps://string-db.org/network/207559.Dde_0408Glycerol-3-phosphate dehydrogenase; KEGG: dvm:DvMF_0811 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
Dde_0409 protein networkhttps://string-db.org/network/207559.Dde_0409PFAM: Major intrinsic protein; KEGG: dvl:Dvul_0253 major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
glpK protein networkhttps://string-db.org/network/207559.Dde_0410Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
Dde_0411 protein networkhttps://string-db.org/network/207559.Dde_0411PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dvm:DvMF_2222 protein of unknown function DUF214.
Dde_0412 protein networkhttps://string-db.org/network/207559.Dde_0412Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2221 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0413 protein networkhttps://string-db.org/network/207559.Dde_0413Arylesterase; KEGG: dvm:DvMF_2220 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL.
Dde_0414 protein networkhttps://string-db.org/network/207559.Dde_0414KEGG: dvm:DvMF_2065 YbaK/EbsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; PFAM: YbaK/aminoacyl-tRNA synthetase associated region; Belongs to the prolyl-tRNA editing family. YbaK/Eb [...]
Dde_0415 protein networkhttps://string-db.org/network/207559.Dde_0415KEGG: gme:Gmet_0448 glycoside hydrolase family protein.
Dde_0416 protein networkhttps://string-db.org/network/207559.Dde_0416KEGG: dth:DICTH_0482 myo-inositol catabolism protein.
Dde_0417 protein networkhttps://string-db.org/network/207559.Dde_0417Acetylornithine transaminase; KEGG: ret:RHE_CH01979 diaminobutyrate--pyruvate aminotransferase protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent am [...]
Dde_0418 protein networkhttps://string-db.org/network/207559.Dde_0418PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: drt:Dret_0619 phosphoribosylglycinamide synthetase.
Dde_0419 protein networkhttps://string-db.org/network/207559.Dde_0419PFAM: Polysaccharide pyruvyl transferase; KEGG: drt:Dret_0618 hypothetical protein.
Dde_0420 protein networkhttps://string-db.org/network/207559.Dde_0420PFAM: Methyltransferase type 12; KEGG: shl:Shal_1398 type 12 methyltransferase.
Dde_0421 protein networkhttps://string-db.org/network/207559.Dde_0421PFAM: Acylneuraminate cytidylyltransferase; KEGG: drt:Dret_0616 acylneuraminate cytidylyltransferase.
Dde_0422 protein networkhttps://string-db.org/network/207559.Dde_0422PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_0478 acetyltransferase, GNAT family.
Dde_0423 protein networkhttps://string-db.org/network/207559.Dde_0423PFAM: N-acetylneuraminic acid synthase, N-terminal; KEGG: gme:Gmet_0455 N-acetylneuraminate synthase.
fcl protein networkhttps://string-db.org/network/207559.Dde_0425GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
Dde_0426 protein networkhttps://string-db.org/network/207559.Dde_0426PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_1842 glycosyl transferase family 2.
Dde_0427 protein networkhttps://string-db.org/network/207559.Dde_0427UDP-glucose 4-epimerase; KEGG: dvu:DVU2996 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase.
Dde_0428 protein networkhttps://string-db.org/network/207559.Dde_0428PFAM: Glycosyl transferase, group 1; KEGG: dvu:DVU2995 glycosyl transferase group 1 family protein.
Dde_0429 protein networkhttps://string-db.org/network/207559.Dde_0429PFAM: Methyltransferase type 11; KEGG: drm:Dred_1396 ubiquinone/menaquinone biosynthesis methylase-like protein.
Dde_0430 protein networkhttps://string-db.org/network/207559.Dde_0430PFAM: Glycosyl transferase, family 2; KEGG: drm:Dred_1399 cell wall biogenesis glycosyltransferase-like protein.
Dde_0431 protein networkhttps://string-db.org/network/207559.Dde_0431PFAM: CDP-glycerol glycerophosphotransferase; Glycosyl transferase, group 1; Glycosyl transferase, family 2; KEGG: dvu:DVU2993 glycosyl transferase group 1/2 family protein.
gmd protein networkhttps://string-db.org/network/207559.Dde_0432GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
Dde_0434 protein networkhttps://string-db.org/network/207559.Dde_0434TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Chemotaxis methyl-accepting receptor, signalling; Haemerythrin/HHE cation-binding motif; KEGG: dsa:Desal_1474 methyl-accepting chemotaxis sensory [...]
Dde_0435 protein networkhttps://string-db.org/network/207559.Dde_0435PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: dvm:DvMF_2972 glycerophosphodiester phosphodiesterase.
corA protein networkhttps://string-db.org/network/207559.Dde_0436Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
Dde_0437 protein networkhttps://string-db.org/network/207559.Dde_0437PFAM: Antibiotic biosynthesis monooxygenase; KEGG: stp:Strop_4239 antibiotic biosynthesis monooxygenase.
Dde_0438 protein networkhttps://string-db.org/network/207559.Dde_0438KEGG: dba:Dbac_0116 UDP-N-acetylglucosamine pyrophosphorylase related protein.
Dde_0439 protein networkhttps://string-db.org/network/207559.Dde_0439PFAM: CDP-glycerol glycerophosphotransferase; KEGG: dsa:Desal_0581 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
Dde_0441 protein networkhttps://string-db.org/network/207559.Dde_0441PFAM: NADPH-dependent FMN reductase; KEGG: dsa:Desal_0619 NADPH-dependent FMN reductase.
Dde_0444 protein networkhttps://string-db.org/network/207559.Dde_0444PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; KEGG: dvu:DVU2379 M16 family peptidase putative; Belongs to the peptidase M16 family.
Dde_0445 protein networkhttps://string-db.org/network/207559.Dde_0445KEGG: rce:RC1_3838 ABC transporter, ATP binding protein, putative; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_0446 protein networkhttps://string-db.org/network/207559.Dde_0446KEGG: cli:Clim_1572 hypothetical protein.
Dde_0447 protein networkhttps://string-db.org/network/207559.Dde_0447PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dba:Dbac_2599 TonB-dependent receptor plug.
Dde_0448 protein networkhttps://string-db.org/network/207559.Dde_0448ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: drt:Dret_0180 extracellular solute-binding protein family 5.
Dde_0449 protein networkhttps://string-db.org/network/207559.Dde_0449ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: drt:Dret_0179 binding-protein-dependent transport systems inner [...]
Dde_0450 protein networkhttps://string-db.org/network/207559.Dde_0450ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_1540 binding-protein-dependent transport systems inner [...]
Dde_0451 protein networkhttps://string-db.org/network/207559.Dde_0451Nickel-transporting ATPase., Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dvu:DVU2387 ABC transporter ATP-binding protein; SMA [...]
Dde_0452 protein networkhttps://string-db.org/network/207559.Dde_0452KEGG: das:Daes_0573 hypothetical protein.
Dde_0453 protein networkhttps://string-db.org/network/207559.Dde_0453PFAM: MotA/TolQ/ExbB proton channel; KEGG: das:Daes_0574 MotA/TolQ/ExbB proton channel.
Dde_0454 protein networkhttps://string-db.org/network/207559.Dde_0454PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_0847 biopolymer transport protein.
Dde_0455 protein networkhttps://string-db.org/network/207559.Dde_0455PFAM: Biopolymer transport protein ExbD/TolR; KEGG: das:Daes_0576 biopolymer transport protein ExbD/TolR.
Dde_0456 protein networkhttps://string-db.org/network/207559.Dde_0456TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: dps:DP2971 TonB protein.
Dde_0457 protein networkhttps://string-db.org/network/207559.Dde_0457PFAM: Tetratricopeptide TPR2; KEGG: dbr:Deba_2292 hypothetical protein.
Dde_0458 protein networkhttps://string-db.org/network/207559.Dde_0458KEGG: dvl:Dvul_0230 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_0459 protein networkhttps://string-db.org/network/207559.Dde_0459ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: pfo:Pfl01_5282 extracellular solute-binding protein.
Dde_0461 protein networkhttps://string-db.org/network/207559.Dde_0461KEGG: dsa:Desal_1359 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like.
Dde_0462 protein networkhttps://string-db.org/network/207559.Dde_0462PFAM: Sulfatase; KEGG: dsa:Desal_1360 sulfatase.
Dde_0463 protein networkhttps://string-db.org/network/207559.Dde_0463KEGG: dsa:Desal_1361 TrmB family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, GntR; SMART: Cyclic nucleotide-binding.
Dde_0464 protein networkhttps://string-db.org/network/207559.Dde_0464PFAM: Glutaredoxin; KEGG: dvl:Dvul_2555 glutaredoxin.
Dde_0465 protein networkhttps://string-db.org/network/207559.Dde_0465Thioredoxin-disulfide reductase; KEGG: dsa:Desal_1363 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleo [...]
Dde_0466 protein networkhttps://string-db.org/network/207559.Dde_0466Hypothetical protein.
Dde_0467 protein networkhttps://string-db.org/network/207559.Dde_0467PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dba:Dbac_3081 indolepyruvate ferredoxin oxidoreductase.
Dde_0468 protein networkhttps://string-db.org/network/207559.Dde_0468KEGG: dba:Dbac_3164 CoA-binding domain-containing protein.
Dde_0473 protein networkhttps://string-db.org/network/207559.Dde_0473TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: dps:DP0481 formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucle [...]
Dde_0474 protein networkhttps://string-db.org/network/207559.Dde_0474Hydrogenase FeS protein, cytoplasmic; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: sth:STH3294 electron transport protein.
Dde_0475 protein networkhttps://string-db.org/network/207559.Dde_0475Fe-only hydrogenase, large & small subunits, cytoplasmic; SMART: Iron hydrogenase, small subunit-like; TIGRFAM: Iron hydrogenase, subset; KEGG: dps:DP0479 Fe-center hydrogenase, large subunit; PF [...]
Dde_0476 protein networkhttps://string-db.org/network/207559.Dde_0476Hydrogenase FeS protein, cytoplasmic; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: clj:CLJU_c20030 Fe-S-cluster-containing hydrogenase component.
Dde_0477 protein networkhttps://string-db.org/network/207559.Dde_0477Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: yen:YE1694 transposase for IS1541.
Dde_0479 protein networkhttps://string-db.org/network/207559.Dde_0479PFAM: Glycosyl transferase, group 1; KEGG: rce:RC1_2537 glycosyl transferase, group 1 family protein.
Dde_0480 protein networkhttps://string-db.org/network/207559.Dde_0480PFAM: O-antigen ligase-related; KEGG: dvm:DvMF_3018 O-antigen polymerase.
Dde_0481 protein networkhttps://string-db.org/network/207559.Dde_0481TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: cyn:Cyan7425_4214 undecaprenyl-phosphate galactose [...]
Dde_0483 protein networkhttps://string-db.org/network/207559.Dde_0483KEGG: dsa:Desal_2558 ATPase AAA; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core.
Dde_0484 protein networkhttps://string-db.org/network/207559.Dde_0484PFAM: Protein of unknown function DUF2201, metallopeptidase-related; KEGG: das:Daes_1896 hypothetical protein.
Dde_0485 protein networkhttps://string-db.org/network/207559.Dde_0485KEGG: dsa:Desal_2560 hypothetical protein.
Dde_0486 protein networkhttps://string-db.org/network/207559.Dde_0486KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_0487 protein networkhttps://string-db.org/network/207559.Dde_0487KEGG: dvu:DVU2006 hypothetical protein.
Dde_0488 protein networkhttps://string-db.org/network/207559.Dde_0488Hypothetical protein.
Dde_0489 protein networkhttps://string-db.org/network/207559.Dde_0489TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dsa:Desal_0106 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPas [...]
Dde_0490 protein networkhttps://string-db.org/network/207559.Dde_0490KEGG: dsa:Desal_0105 hypothetical protein.
Dde_0491 protein networkhttps://string-db.org/network/207559.Dde_0491KEGG: dbr:Deba_0548 hypothetical protein.
Dde_0492 protein networkhttps://string-db.org/network/207559.Dde_0492KEGG: dsa:Desal_0107 hypothetical protein.
Dde_0493 protein networkhttps://string-db.org/network/207559.Dde_0493KEGG: dap:Dacet_2133 hypothetical protein.
Dde_0494 protein networkhttps://string-db.org/network/207559.Dde_0494KEGG: dbr:Deba_0551 hypothetical protein.
Dde_0495 protein networkhttps://string-db.org/network/207559.Dde_0495TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dsa:Desal_0101 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPas [...]
Dde_0496 protein networkhttps://string-db.org/network/207559.Dde_0496FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; KEGG: dsa:Desal_0100 FeoA family protein.
fur protein networkhttps://string-db.org/network/207559.Dde_0497Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: das:Daes_1894 ferric-uptake regulator; Belongs to the Fur family.
Dde_0498 protein networkhttps://string-db.org/network/207559.Dde_0498Cation transport ATPase, iron related protein; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dsa:Desal_0101 heavy metal transloca [...]
Dde_0500 protein networkhttps://string-db.org/network/207559.Dde_0500TIGRFAM: Addiction module antidote protein, HI1420; KEGG: dvl:Dvul_1443 transcriptional regulator.
Dde_0501 protein networkhttps://string-db.org/network/207559.Dde_0501KEGG: dvl:Dvul_1444 hypothetical protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891.
glmS protein networkhttps://string-db.org/network/207559.Dde_0502Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
Dde_0503 protein networkhttps://string-db.org/network/207559.Dde_0503HPP family protein; PFAM: HPP; KEGG: dvl:Dvul_0138 HPP family protein+B94.
Dde_0504 protein networkhttps://string-db.org/network/207559.Dde_0504Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...]
Dde_0505 protein networkhttps://string-db.org/network/207559.Dde_0505TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dvm:DvMF_1700 PAS/PAC sensor signal t [...]
rimO protein networkhttps://string-db.org/network/207559.Dde_0506MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
Dde_0507 protein networkhttps://string-db.org/network/207559.Dde_0507Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
Dde_0508 protein networkhttps://string-db.org/network/207559.Dde_0508KEGG: dvl:Dvul_0236 signal peptide peptidase SppA, 36K type; TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49.
Dde_0510 protein networkhttps://string-db.org/network/207559.Dde_05104-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; KEGG: dvm:DvMF_1705 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77.
Dde_0511 protein networkhttps://string-db.org/network/207559.Dde_0511KEGG: dvl:Dvul_0238 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; 6-phosphofructo-2-kinase; SMART: Phosphoglycerate mutase.
Dde_0512 protein networkhttps://string-db.org/network/207559.Dde_0512KEGG: dvu:DVU0391 hypothetical protein.
Dde_0513 protein networkhttps://string-db.org/network/207559.Dde_0513Aspartate transaminase; KEGG: dvl:Dvul_2542 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II.
ung protein networkhttps://string-db.org/network/207559.Dde_0514uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
Dde_0515 protein networkhttps://string-db.org/network/207559.Dde_0515KEGG: das:Daes_0108 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_0517 protein networkhttps://string-db.org/network/207559.Dde_0517Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as i [...]
Dde_0518 protein networkhttps://string-db.org/network/207559.Dde_0518PFAM: Amidase; KEGG: mxa:MXAN_2852 amidase family protein; Belongs to the amidase family.
rlpA protein networkhttps://string-db.org/network/207559.Dde_0519Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
Dde_0520 protein networkhttps://string-db.org/network/207559.Dde_0520Putative cache sensor protein; PFAM: Pyruvate carboxyltransferase; Cache; KEGG: dvm:DvMF_1549 pyruvate carboxyltransferase.
Dde_0521 protein networkhttps://string-db.org/network/207559.Dde_0521KEGG: dvm:DvMF_1550 hypothetical protein.
Dde_0523 protein networkhttps://string-db.org/network/207559.Dde_0523KEGG: dvu:DVU0400 hypothetical protein.
Dde_0524 protein networkhttps://string-db.org/network/207559.Dde_0524KEGG: dvm:DvMF_1552 hypothetical protein.
Dde_0526 protein networkhttps://string-db.org/network/207559.Dde_0526TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type subunit alpha; PFAM: Nitrite/sulphite reductase 4Fe-4S region.
Dde_0527 protein networkhttps://string-db.org/network/207559.Dde_0527TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferred [...]
Dde_0528 protein networkhttps://string-db.org/network/207559.Dde_0528PFAM: Dissimilatory sulphite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B.
cbiA-2 protein networkhttps://string-db.org/network/207559.Dde_0529Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen so [...]
Dde_0530 protein networkhttps://string-db.org/network/207559.Dde_0530PFAM: Protein of unknown function DUF6, transmembrane; KEGG: sfu:Sfum_0926 hypothetical protein.
rlpA-2 protein networkhttps://string-db.org/network/207559.Dde_0531Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
Dde_0532 protein networkhttps://string-db.org/network/207559.Dde_0532Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; P [...]
Dde_0534 protein networkhttps://string-db.org/network/207559.Dde_0534PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_0536 protein networkhttps://string-db.org/network/207559.Dde_0536Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds [...]
Dde_0537 protein networkhttps://string-db.org/network/207559.Dde_0537Ribonuclease, Rne/Rng family; KEGG: dvl:Dvul_0321 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain.
Dde_0538 protein networkhttps://string-db.org/network/207559.Dde_0538KEGG: dvm:DvMF_2377 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_0539 protein networkhttps://string-db.org/network/207559.Dde_0539tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
Dde_0540 protein networkhttps://string-db.org/network/207559.Dde_0540Coenzyme F390 synthetase family; PFAM: AMP-dependent synthetase/ligase; KEGG: dvm:DvMF_2446 phenylacetate-coenzyme A ligase, putative.
Dde_0541 protein networkhttps://string-db.org/network/207559.Dde_0541KEGG: dma:DMR_16980 hypothetical protein; PFAM: Protein of unknown function DUF399; SMART: PDZ/DHR/GLGF.
Dde_0542 protein networkhttps://string-db.org/network/207559.Dde_0542formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...]
murJ protein networkhttps://string-db.org/network/207559.Dde_0543Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
Dde_0544 protein networkhttps://string-db.org/network/207559.Dde_0544KEGG: dsa:Desal_2870 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; HAMP linker domain; Signal transduction hi [...]
murA protein networkhttps://string-db.org/network/207559.Dde_0546UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
Dde_0547 protein networkhttps://string-db.org/network/207559.Dde_0547TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: das:Daes_1194 DNA internalization-like competence protein ComEC/Rec2; SMART: Beta-lactamase-like.
Dde_0548 protein networkhttps://string-db.org/network/207559.Dde_0548PFAM: Acriflavin resistance protein; KEGG: dsa:Desal_0546 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Dde_0549 protein networkhttps://string-db.org/network/207559.Dde_0549KEGG: dsa:Desal_0545 efflux transporter RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_0550 protein networkhttps://string-db.org/network/207559.Dde_0550Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fol [...]
Dde_0551 protein networkhttps://string-db.org/network/207559.Dde_0551Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: dvm:DvMF_2456 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.
Dde_0552 protein networkhttps://string-db.org/network/207559.Dde_0552KEGG: dvm:DvMF_2457 hypothetical protein.
Dde_0553 protein networkhttps://string-db.org/network/207559.Dde_0553AAA-4 family protein; PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: caa:Caka_0849 putative transcriptional regulator.
Dde_0554 protein networkhttps://string-db.org/network/207559.Dde_0554KEGG: dvu:DVU3268 hypothetical protein.
Dde_0555 protein networkhttps://string-db.org/network/207559.Dde_0555(NiFe) hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydr [...]
Dde_0556 protein networkhttps://string-db.org/network/207559.Dde_0556KEGG: dvl:Dvul_0311 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
Dde_0557 protein networkhttps://string-db.org/network/207559.Dde_0557Long-chain-fatty-acid--CoA ligase; KEGG: dvl:Dvul_0312 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase.
Dde_0558 protein networkhttps://string-db.org/network/207559.Dde_0558TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; KEGG: dvm:DvM [...]
ftsY protein networkhttps://string-db.org/network/207559.Dde_0560Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
Dde_0561 protein networkhttps://string-db.org/network/207559.Dde_0561KEGG: drt:Dret_0454 cytochrome c family protein.
Dde_0563 protein networkhttps://string-db.org/network/207559.Dde_0563KEGG: dvm:DvMF_1545 hypothetical protein.
Dde_0564 protein networkhttps://string-db.org/network/207559.Dde_0564KEGG: dvm:DvMF_1546 hypothetical protein.
Dde_0565 protein networkhttps://string-db.org/network/207559.Dde_0565PFAM: Glycosyl transferase, family 9; KEGG: dvl:Dvul_2523 glycosyl transferase family protein.
Dde_0566 protein networkhttps://string-db.org/network/207559.Dde_0566TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: dvl:Dvul_2522 TrkA domain-containing protein.
Dde_0567 protein networkhttps://string-db.org/network/207559.Dde_0567H(+)-transporting two-sector ATPase; KEGG: dvu:DVU0413 TrkH family potassium uptake protein; PFAM: Cation transporter.
pepA protein networkhttps://string-db.org/network/207559.Dde_0568Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
Dde_0569 protein networkhttps://string-db.org/network/207559.Dde_0569SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_1537 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted.
Dde_0571 protein networkhttps://string-db.org/network/207559.Dde_0571Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
Dde_0572 protein networkhttps://string-db.org/network/207559.Dde_0572Carboxynorspermidine synthase; PFAM: Saccharopine dehydrogenase; KEGG: dvl:Dvul_2516 saccharopine dehydrogenase.
Dde_0573 protein networkhttps://string-db.org/network/207559.Dde_0573Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
Dde_0574 protein networkhttps://string-db.org/network/207559.Dde_0574Agmatinase; TIGRFAM: Putative agmatinase; KEGG: dvu:DVU0421 agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
Dde_0575 protein networkhttps://string-db.org/network/207559.Dde_0575KEGG: dvm:DvMF_1208 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
Dde_0576 protein networkhttps://string-db.org/network/207559.Dde_0576PFAM: Protein of unknown function DUF2207, membrane; KEGG: dma:DMR_20450 hypothetical membrane protein.
Dde_0577 protein networkhttps://string-db.org/network/207559.Dde_0577LemA family protein; PFAM: LemA; KEGG: dba:Dbac_2637 LemA family protein.
Dde_0579 protein networkhttps://string-db.org/network/207559.Dde_0579Hypothetical protein.
Dde_0580 protein networkhttps://string-db.org/network/207559.Dde_0580KEGG: dvl:Dvul_0523 cytochrome c.
Dde_0581 protein networkhttps://string-db.org/network/207559.Dde_0581NADH:quinone oxidoreductase subunit RnfC; PFAM: Soluble ligand binding domain; KEGG: dvl:Dvul_0522 electron transport complex protein RnfC.
rnfD protein networkhttps://string-db.org/network/207559.Dde_0582NADH:quinone oxidoreductase subunit RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
rnfG protein networkhttps://string-db.org/network/207559.Dde_0583NADH:quinone oxidoreductase subunit RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
rnfE protein networkhttps://string-db.org/network/207559.Dde_0584NADH:quinone oxidoreductase subunit RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfA protein networkhttps://string-db.org/network/207559.Dde_0585NADH:quinone oxidoreductase subunit RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfB protein networkhttps://string-db.org/network/207559.Dde_0586NADH:quinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferre [...]
Dde_0587 protein networkhttps://string-db.org/network/207559.Dde_0587ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Be [...]
Dde_0589 protein networkhttps://string-db.org/network/207559.Dde_0589PFAM: UspA; KEGG: dvm:DvMF_1529 UspA domain protein.
Dde_0590 protein networkhttps://string-db.org/network/207559.Dde_0590Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and [...]
Dde_0591 protein networkhttps://string-db.org/network/207559.Dde_0591KEGG: dvm:DvMF_1527 hypothetical protein.
Dde_0592 protein networkhttps://string-db.org/network/207559.Dde_0592PFAM: Glycosyl transferase, group 1; KEGG: dap:Dacet_1893 glycosyl transferase group 1.
Dde_0593 protein networkhttps://string-db.org/network/207559.Dde_0593PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_3019 glycosyl transferase group 1.
Dde_0594 protein networkhttps://string-db.org/network/207559.Dde_0594TIGRFAM: Type 1 secretion, target domain, C-terminal; PFAM: von Willebrand factor, type A; Haemolysin-type calcium-binding region; KEGG: pmy:Pmen_1806 hemolysin-type calcium-binding region; SMART [...]
Dde_0597 protein networkhttps://string-db.org/network/207559.Dde_0597PFAM: Protein of unknown function DUF169; KEGG: dvm:DvMF_2193 protein of unknown function DUF169.
Dde_0598 protein networkhttps://string-db.org/network/207559.Dde_0598PFAM: Protein of unknown function DUF81; KEGG: dsa:Desal_2371 hypothetical protein.
Dde_0600 protein networkhttps://string-db.org/network/207559.Dde_0600KEGG: dsa:Desal_2372 hypothetical protein.
Dde_0601 protein networkhttps://string-db.org/network/207559.Dde_0601TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dsa:Desal_2373 phosphonate ABC transporter periplasmic phosphonate-binding protein.
Dde_0602 protein networkhttps://string-db.org/network/207559.Dde_0602Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisat [...]
Dde_0603 protein networkhttps://string-db.org/network/207559.Dde_0603KEGG: dvm:DvMF_2188 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0604 protein networkhttps://string-db.org/network/207559.Dde_0604Pyruvate, water dikinase; KEGG: dvm:DvMF_2187 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region.
Dde_0605 protein networkhttps://string-db.org/network/207559.Dde_0605PFAM: Dual specificity phosphatase, catalytic domain; KEGG: dba:Dbac_1987 dual specificity protein phosphatase.
Dde_0607 protein networkhttps://string-db.org/network/207559.Dde_0607KEGG: dsa:Desal_0961 hypothetical protein.
Dde_0608 protein networkhttps://string-db.org/network/207559.Dde_0608Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_2498 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0609 protein networkhttps://string-db.org/network/207559.Dde_0609Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_2499 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0610 protein networkhttps://string-db.org/network/207559.Dde_0610ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_2500 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0611 protein networkhttps://string-db.org/network/207559.Dde_0611ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_2501 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_0612 protein networkhttps://string-db.org/network/207559.Dde_0612PFAM: Extracellular ligand-binding receptor; KEGG: dvm:DvMF_2607 extracellular ligand-binding receptor.
Dde_0618 protein networkhttps://string-db.org/network/207559.Dde_0618PFAM: Integrase, catalytic core; KEGG: maq:Maqu_4025 integrase catalytic subunit.
Dde_0620 protein networkhttps://string-db.org/network/207559.Dde_0620Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: dpr:Despr_0398 integrase family protein; Belongs to the 'phage' integrase family.
Dde_0621 protein networkhttps://string-db.org/network/207559.Dde_0621PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; KEGG: dvu:DVU2953 GntR family transcriptional regulator; SMART: HTH transcriptional regulator, GntR.
glnS protein networkhttps://string-db.org/network/207559.Dde_0626TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; KEGG: dvm:DvMF_1485 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synt [...]
Dde_0628 protein networkhttps://string-db.org/network/207559.Dde_0628SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dak:DaAHT2_0955 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III.
Dde_0629 protein networkhttps://string-db.org/network/207559.Dde_0629KEGG: dba:Dbac_0554 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synth [...]
Dde_0630 protein networkhttps://string-db.org/network/207559.Dde_0630KEGG: dba:Dbac_0555 Na+/solute symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; PFAM: Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Dde_0631 protein networkhttps://string-db.org/network/207559.Dde_0631TIGRFAM: Probable solute:sodium symporter, small subunit; KEGG: dba:Dbac_0556 hypothetical protein.
Dde_0634 protein networkhttps://string-db.org/network/207559.Dde_0634Extracellular solute-binding protein, family 7; Solute-binding protein that binds indole-3-pyruvate and indole-3-acetate (in vitro). Can also bind D-tryptophan (in vitro), but that is probably no [...]
Dde_0635 protein networkhttps://string-db.org/network/207559.Dde_0635KEGG: das:Daes_2938 tripartite ATP-independent periplasmic transporter DctQ component.
Dde_0636 protein networkhttps://string-db.org/network/207559.Dde_0636KEGG: dsa:Desal_3245 TRAP dicarboxylate transporter DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
Dde_0637 protein networkhttps://string-db.org/network/207559.Dde_0637KEGG: mxa:MXAN_4523 putative lipoprotein.
Dde_0638 protein networkhttps://string-db.org/network/207559.Dde_0638PFAM: Anti-sigma-28 factor, FlgM; KEGG: dvm:DvMF_2585 anti-sigma-28 factor, FlgM.
Dde_0639 protein networkhttps://string-db.org/network/207559.Dde_0639KEGG: dvm:DvMF_2586 hypothetical protein.
Dde_0640 protein networkhttps://string-db.org/network/207559.Dde_0640Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into ce [...]
Dde_0641 protein networkhttps://string-db.org/network/207559.Dde_0641Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
Dde_0642 protein networkhttps://string-db.org/network/207559.Dde_0642KEGG: dvm:DvMF_0907 NADH dehydrogenase (ubiquinone); PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
Dde_0643 protein networkhttps://string-db.org/network/207559.Dde_0643KEGG: dap:Dacet_2731 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_0644 protein networkhttps://string-db.org/network/207559.Dde_0644PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: dma:DMR_34250 fi [...]
Dde_0645 protein networkhttps://string-db.org/network/207559.Dde_0645KEGG: dal:Dalk_2637 hypothetical protein.
Dde_0647 protein networkhttps://string-db.org/network/207559.Dde_0647KEGG: dvl:Dvul_2412 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
Dde_0648 protein networkhttps://string-db.org/network/207559.Dde_0648HmcF, 52.7 kd protein in hmc operon; PFAM: Cysteine-rich region, CCG; KEGG: dvl:Dvul_2410 hypothetical protein.
Dde_0649 protein networkhttps://string-db.org/network/207559.Dde_0649KEGG: dvl:Dvul_2409 hmc operon protein 5.
Dde_0650 protein networkhttps://string-db.org/network/207559.Dde_0650KEGG: dvl:Dvul_2408 hmc operon protein 4.
Dde_0651 protein networkhttps://string-db.org/network/207559.Dde_0651HmcC, 43.2 kd protein in hmc operon; PFAM: Polysulphide reductase, NrfD; KEGG: dvm:DvMF_2596 polysulphide reductase NrfD.
Dde_0652 protein networkhttps://string-db.org/network/207559.Dde_0652HmcB, 40.1 kd protein in hmc operon; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvu:DVU0535 hmc operon protein 2.
Dde_0653 protein networkhttps://string-db.org/network/207559.Dde_0653PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_2405 cytochrome c class III.
Dde_0655 protein networkhttps://string-db.org/network/207559.Dde_0655PFAM: Xylose isomerase, TIM barrel domain; KEGG: dvm:DvMF_2599 xylose isomerase domain protein TIM barrel.
Dde_0656 protein networkhttps://string-db.org/network/207559.Dde_0656KEGG: dvm:DvMF_1693 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_0657 protein networkhttps://string-db.org/network/207559.Dde_0657PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_1693 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_0659 protein networkhttps://string-db.org/network/207559.Dde_0659PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: dvm:DvMF_1692 PA [...]
Dde_0661 protein networkhttps://string-db.org/network/207559.Dde_0661KEGG: neu:NE0256 hypothetical protein.
Dde_0664 protein networkhttps://string-db.org/network/207559.Dde_0664Hypothetical protein.
Dde_0665 protein networkhttps://string-db.org/network/207559.Dde_0665Maltose O-acetyltransferase; KEGG: bae:BATR1942_16910 transferase hexapeptide repeat containing protein.
Dde_0667 protein networkhttps://string-db.org/network/207559.Dde_0667PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ipa:Isop_3201 endonuclease/exonuclease/phosphatase.
Dde_0668 protein networkhttps://string-db.org/network/207559.Dde_0668KEGG: das:Daes_2331 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1.
Dde_0669 protein networkhttps://string-db.org/network/207559.Dde_0669KEGG: cth:Cthe_1449 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
Dde_0670 protein networkhttps://string-db.org/network/207559.Dde_0670PFAM: Acriflavin resistance protein; KEGG: dsa:Desal_0071 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Dde_0671 protein networkhttps://string-db.org/network/207559.Dde_0671KEGG: dsa:Desal_0070 efflux transporter RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_0673 protein networkhttps://string-db.org/network/207559.Dde_0673SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: dvl:Dvul_0956 glycine/betaine ABC transporter ATPase; PF [...]
Dde_0674 protein networkhttps://string-db.org/network/207559.Dde_0674ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0957 glycine/betaine ABC transporter permease.
Dde_0675 protein networkhttps://string-db.org/network/207559.Dde_0675PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: dvm:DvMF_1043 substrate-binding region of ABC-type glycine betaine transport system.
Dde_0676 protein networkhttps://string-db.org/network/207559.Dde_0676PFAM: Protein of unknown function DUF156; KEGG: dsa:Desal_0378 hypothetical protein.
Dde_0677 protein networkhttps://string-db.org/network/207559.Dde_0677KEGG: das:Daes_3185 TorD-like chaperone.
Dde_0678 protein networkhttps://string-db.org/network/207559.Dde_0678KEGG: dsa:Desal_0375 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
Dde_0679 protein networkhttps://string-db.org/network/207559.Dde_0679Rhodanese-like protein; KEGG: dsa:Desal_0374 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
Dde_0680 protein networkhttps://string-db.org/network/207559.Dde_0680KEGG: das:Daes_3181 cytochrome b/b6 domain-containing protein.
Dde_0681 protein networkhttps://string-db.org/network/207559.Dde_0681PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dsa:Desal_0372 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_0682 protein networkhttps://string-db.org/network/207559.Dde_0682Nitrate reductase; KEGG: dsa:Desal_0371 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase Fe4S4 region; Belo [...]
Dde_0683 protein networkhttps://string-db.org/network/207559.Dde_0683KEGG: dsa:Desal_0370 cytochrome c family protein.
Dde_0685 protein networkhttps://string-db.org/network/207559.Dde_0685Formylmethanofuran dehydrogenase subunit E region; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Dde_0692 protein networkhttps://string-db.org/network/207559.Dde_0692KEGG: sfu:Sfum_0648 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0693 protein networkhttps://string-db.org/network/207559.Dde_0693Citrate transporter; PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: dat:HRM2_22850 SLC13A transporter family protein (TrkA domain protein).
Dde_0694 protein networkhttps://string-db.org/network/207559.Dde_0694KEGG: dal:Dalk_2251 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0695 protein networkhttps://string-db.org/network/207559.Dde_0695KEGG: dal:Dalk_2250 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0696 protein networkhttps://string-db.org/network/207559.Dde_0696KEGG: dvl:Dvul_2828 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacc [...]
Dde_0697 protein networkhttps://string-db.org/network/207559.Dde_0697KEGG: dba:Dbac_2039 sigma 54 interacting domain protein; PFAM: RNA polymerase sigma factor 54, interaction; HAMP linker domain; SMART: ATPase, AAA+ type, core; HAMP linker domain.
Dde_0698 protein networkhttps://string-db.org/network/207559.Dde_0698PFAM: ABC-2 type transporter; KEGG: das:Daes_1391 ABC-2 type transporter.
Dde_0699 protein networkhttps://string-db.org/network/207559.Dde_0699Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: das:Daes_1392 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_0700 protein networkhttps://string-db.org/network/207559.Dde_0700PFAM: Secretion protein HlyD; KEGG: das:Daes_1393 secretion protein HlyD family protein.
Dde_0701 protein networkhttps://string-db.org/network/207559.Dde_0701KEGG: cbi:CLJ_B2396 xanthine/uracil permease family protein; TIGRFAM: Xanthine permease; PFAM: Xanthine/uracil/vitamin C permease.
Dde_0702 protein networkhttps://string-db.org/network/207559.Dde_0702S-adenosylhomocysteine deaminase; KEGG: cbh:CLC_2131 amidohydrolase domain-containing protein; PFAM: Amidohydrolase 1.
Dde_0703 protein networkhttps://string-db.org/network/207559.Dde_0703Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; HAMP linker domain; KEGG: das:Daes_0927 PAS sen [...]
msrB protein networkhttps://string-db.org/network/207559.Dde_0704TIGRFAM: Methionine sulphoxide reductase B; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B.
Dde_0706 protein networkhttps://string-db.org/network/207559.Dde_0706Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
Dde_0707 protein networkhttps://string-db.org/network/207559.Dde_0707PFAM: Formate dehydrogenase, subunit FdhD; KEGG: dvm:DvMF_1232 formate dehydrogenase accessory protein FdhD, putative.
mobA protein networkhttps://string-db.org/network/207559.Dde_0708Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine din [...]
moaA protein networkhttps://string-db.org/network/207559.Dde_0709Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
Dde_0710 protein networkhttps://string-db.org/network/207559.Dde_0710KEGG: dba:Dbac_0976 anti-sigma-factor antagonist; PFAM: Signal transduction response regulator, receiver region; Sulphate transporter/antisigma-factor antagonist STAS; SMART: Signal transduction [...]
Dde_0711 protein networkhttps://string-db.org/network/207559.Dde_0711TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dvl:Dvul_2370 multi-sensor signal trans [...]
Dde_0712 protein networkhttps://string-db.org/network/207559.Dde_0712PFAM: Extracellular ligand-binding receptor; KEGG: dvm:DvMF_1221 extracellular ligand-binding receptor.
Dde_0713 protein networkhttps://string-db.org/network/207559.Dde_0713PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvm:DvMF_1220 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
Dde_0714 protein networkhttps://string-db.org/network/207559.Dde_0714KEGG: dvm:DvMF_1219 transposase, putative.
Dde_0715 protein networkhttps://string-db.org/network/207559.Dde_0715Hypothetical protein.
Dde_0717 protein networkhttps://string-db.org/network/207559.Dde_0717TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; KEGG: dvu:DVU0587 formate dehydrogenase subunit alpha, selenocysteine-containing; P [...]
Dde_0718 protein networkhttps://string-db.org/network/207559.Dde_0718KEGG: dvm:DvMF_1216 formate dehydrogenase, beta subunit, putative.
Dde_0719 protein networkhttps://string-db.org/network/207559.Dde_0719PFAM: Putative Fe-S cluster; Molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: dvm:DvMF_1215 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-cont [...]
Dde_0720 protein networkhttps://string-db.org/network/207559.Dde_0720KEGG: das:Daes_0557 anti-anti-sigma factor; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
Dde_0721 protein networkhttps://string-db.org/network/207559.Dde_0721Protein serine/threonine phosphatase with Cache sensor; KEGG: das:Daes_0559 stage II sporulation protein E; PFAM: Sporulation stage II, protein E C-terminal; Cache; HAMP linker domain; SMART: Pro [...]
Dde_0722 protein networkhttps://string-db.org/network/207559.Dde_0722Xenobiotic-transporting ATPase., Beta-glucan-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: sfu:Sfum_4031 ABC transporter-like protein; SMART: ATPas [...]
Dde_0723 protein networkhttps://string-db.org/network/207559.Dde_0723Putative transcriptional regulator, Crp/Fnr family; KEGG: sfu:Sfum_3249 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding.
Dde_0725 protein networkhttps://string-db.org/network/207559.Dde_0725KEGG: dps:DP2379 hydrogenase; PFAM: Iron hydrogenase, large subunit, C-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
Dde_0727 protein networkhttps://string-db.org/network/207559.Dde_0727PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: dvm:DvMF_1119 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton [...]
Dde_0728 protein networkhttps://string-db.org/network/207559.Dde_0728PFAM: Oligopeptide transporter OPT superfamily; KEGG: das:Daes_0608 hypothetical protein.
Dde_0729 protein networkhttps://string-db.org/network/207559.Dde_0729KEGG: das:Daes_0607 hypothetical protein.
Dde_0730 protein networkhttps://string-db.org/network/207559.Dde_0730PFAM: Protein of unknown function DUF214, permase predicted; KEGG: das:Daes_0606 hypothetical protein.
Dde_0731 protein networkhttps://string-db.org/network/207559.Dde_0731Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: das:Daes_0605 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_0732 protein networkhttps://string-db.org/network/207559.Dde_0732Hypothetical protein; KEGG: rlg:Rleg_0452 O-methyltransferase family 3.
Dde_0733 protein networkhttps://string-db.org/network/207559.Dde_0733PFAM: Protein of unknown function DUF214, permase predicted; KEGG: das:Daes_0604 hypothetical protein.
Dde_0734 protein networkhttps://string-db.org/network/207559.Dde_0734PFAM: Polysaccharide deacetylase; KEGG: das:Daes_0603 polysaccharide deacetylase.
Dde_0735 protein networkhttps://string-db.org/network/207559.Dde_0735KEGG: das:Daes_3313 hypothetical protein.
Dde_0736 protein networkhttps://string-db.org/network/207559.Dde_0736PFAM: Phosphoglycerate mutase; KEGG: das:Daes_3314 phosphoglycerate mutase.
Dde_0737 protein networkhttps://string-db.org/network/207559.Dde_0737PFAM: Glycosyl transferase, group 1; KEGG: dma:DMR_34950 putative glycosyltransferase.
Dde_0738 protein networkhttps://string-db.org/network/207559.Dde_0738PFAM: Glycosyl transferase, group 1; KEGG: das:Daes_0311 group 1 glycosyl transferase.
Dde_0739 protein networkhttps://string-db.org/network/207559.Dde_0739PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: das:Daes_0310 glycosyltransferase 28 domain-containing protein.
Dde_0740 protein networkhttps://string-db.org/network/207559.Dde_0740PFAM: Radical SAM; KEGG: das:Daes_0309 radical SAM domain-containing protein.
Dde_0741 protein networkhttps://string-db.org/network/207559.Dde_0741PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_0743 protein networkhttps://string-db.org/network/207559.Dde_0743KEGG: dvm:DvMF_1210 hypothetical protein.
Dde_0745 protein networkhttps://string-db.org/network/207559.Dde_0745PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_0747 protein networkhttps://string-db.org/network/207559.Dde_0747KEGG: dvl:Dvul_0525 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
Dde_0748 protein networkhttps://string-db.org/network/207559.Dde_0748KEGG: dba:Dbac_0543 hypothetical protein.
Dde_0749 protein networkhttps://string-db.org/network/207559.Dde_0749KEGG: dvm:DvMF_1205 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
Dde_0750 protein networkhttps://string-db.org/network/207559.Dde_0750(S)-2-hydroxy-acid oxidase; KEGG: dvm:DvMF_1204 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase.
Dde_0751 protein networkhttps://string-db.org/network/207559.Dde_0751PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_34990 hypothetical protein.
Dde_0752 protein networkhttps://string-db.org/network/207559.Dde_0752Hypothetical protein.
fur-2 protein networkhttps://string-db.org/network/207559.Dde_0753Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: dvl:Dvul_2043 ferric uptake regulator family protein; Belongs to the Fur family.
Dde_0754 protein networkhttps://string-db.org/network/207559.Dde_0754PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dvm:DvMF_1200 TRAP dicarboxylate transporter-DctP subunit.
Dde_0755 protein networkhttps://string-db.org/network/207559.Dde_0755Hypothetical protein.
Dde_0756 protein networkhttps://string-db.org/network/207559.Dde_0756KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_0757 protein networkhttps://string-db.org/network/207559.Dde_0757KEGG: dvu:DVU2006 hypothetical protein.
Dde_0758 protein networkhttps://string-db.org/network/207559.Dde_0758TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dvu:DVU3061 sensory box histidine kin [...]
Dde_0759 protein networkhttps://string-db.org/network/207559.Dde_0759KEGG: dba:Dbac_0791 putative ABC transporter solute-binding protein.
Dde_0760 protein networkhttps://string-db.org/network/207559.Dde_0760PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pao:Pat9b_4202 inosine/uridine-preferring nucleoside hydrolase.
Dde_0761 protein networkhttps://string-db.org/network/207559.Dde_0761Hypothetical protein.
Dde_0762 protein networkhttps://string-db.org/network/207559.Dde_0762Sulfite reductase, dissimilatory-type gamma subunit; TIGRFAM: DsrC-like protein; KEGG: dvl:Dvul_0534 DsrC family protein; PFAM: DsrC-like protein.
Dde_0765 protein networkhttps://string-db.org/network/207559.Dde_0765KEGG: dvm:DvMF_2848 CBS domain containing membrane protein; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core.
Dde_0766 protein networkhttps://string-db.org/network/207559.Dde_0766KEGG: dvu:DVU2772 hypothetical protein; TIGRFAM: Protein of unknown function DUF111; PFAM: Protein of unknown function DUF111.
Dde_0767 protein networkhttps://string-db.org/network/207559.Dde_0767Hypothetical protein.
Dde_0768 protein networkhttps://string-db.org/network/207559.Dde_0768KEGG: dsa:Desal_1754 hypothetical protein.
Dde_0769 protein networkhttps://string-db.org/network/207559.Dde_0769KEGG: dvm:DvMF_2850 hypothetical protein.
Dde_0770 protein networkhttps://string-db.org/network/207559.Dde_0770KEGG: das:Daes_0271 hypothetical protein.
Dde_0772 protein networkhttps://string-db.org/network/207559.Dde_0772Protein serine/threonine phosphatase with extracellular sensor; KEGG: das:Daes_0270 stage II sporulation protein E; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: Pr [...]
Dde_0773 protein networkhttps://string-db.org/network/207559.Dde_0773PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: dvm:DvMF_2861 import inner membrane translocase subunit Tim44.
Dde_0774 protein networkhttps://string-db.org/network/207559.Dde_0774KEGG: dvm:DvMF_2860 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_0779 protein networkhttps://string-db.org/network/207559.Dde_0779KEGG: gwc:GWCH70_2069 SNF2-related protein; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal.
Dde_0780 protein networkhttps://string-db.org/network/207559.Dde_0780KEGG: rsh:Rsph17029_2028 hypothetical protein.
Dde_0781 protein networkhttps://string-db.org/network/207559.Dde_0781Helicase domain-containing protein; SMART: DNA/RNA helicase, C-terminal; KEGG: ddc:Dd586_2684 helicase domain-containing protein.
Dde_0784 protein networkhttps://string-db.org/network/207559.Dde_0784PFAM: Phosphoribosyltransferase; KEGG: dvm:DvMF_2857 phosphoribosyltransferase.
Dde_0785 protein networkhttps://string-db.org/network/207559.Dde_0785PFAM: NADPH-dependent FMN reductase; KEGG: dvm:DvMF_2856 NADPH-dependent FMN reductase.
Dde_0786 protein networkhttps://string-db.org/network/207559.Dde_0786Beta-lactamase domain protein; SMART: Beta-lactamase-like; KEGG: dvm:DvMF_2853 beta-lactamase domain protein.
Dde_0787 protein networkhttps://string-db.org/network/207559.Dde_0787PFAM: Nitroreductase-like; KEGG: drt:Dret_2187 nitroreductase.
Dde_0788 protein networkhttps://string-db.org/network/207559.Dde_0788Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: dvm:DvMF_2851 diguanylate cyclase and serine/threonine protein kinase with TPR repe [...]
Dde_0789 protein networkhttps://string-db.org/network/207559.Dde_07895'-nucleotidase; KEGG: tin:Tint_0959 5'-nucleotidase; PFAM: 5-nucleotidase.
Dde_0791 protein networkhttps://string-db.org/network/207559.Dde_0791PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvl:Dvul_0547 hypothetical protein.
Dde_0792 protein networkhttps://string-db.org/network/207559.Dde_0792PFAM: GCN5-related N-acetyltransferase; KEGG: dsa:Desal_1462 GCN5-related N-acetyltransferase.
Dde_0793 protein networkhttps://string-db.org/network/207559.Dde_0793KEGG: dba:Dbac_2093 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1.
Dde_0795 protein networkhttps://string-db.org/network/207559.Dde_0795KEGG: adn:Alide_0970 hypothetical protein.
mqnA protein networkhttps://string-db.org/network/207559.Dde_0796Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
mqnC protein networkhttps://string-db.org/network/207559.Dde_0797FO synthase, subunit 2; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquin [...]
mqnE protein networkhttps://string-db.org/network/207559.Dde_0798FO synthase, subunit 2; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key [...]
mqnD protein networkhttps://string-db.org/network/207559.Dde_0799Hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belon [...]
Dde_0800 protein networkhttps://string-db.org/network/207559.Dde_0800PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_1487 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_0801 protein networkhttps://string-db.org/network/207559.Dde_0801Precorrin-4 C11-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: dvm:DvMF_1177 precorrin-4 C11-methyltransferase; PFAM: T [...]
Dde_0802 protein networkhttps://string-db.org/network/207559.Dde_0802ABC-type transporter, periplasmic subunit family 3; KEGG: hch:HCH_04060 amino acid ABC transporter periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular [...]
Dde_0803 protein networkhttps://string-db.org/network/207559.Dde_0803Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesi [...]
cbiD protein networkhttps://string-db.org/network/207559.Dde_0804Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
Dde_0805 protein networkhttps://string-db.org/network/207559.Dde_0805DoxX family protein; PFAM: DoxX; KEGG: dvm:DvMF_1173 hypothetical protein.
Dde_0806 protein networkhttps://string-db.org/network/207559.Dde_0806KEGG: dvm:DvMF_1172 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
Dde_0807 protein networkhttps://string-db.org/network/207559.Dde_0807KEGG: dsa:Desal_3495 hypothetical protein; Belongs to the UPF0597 family.
Dde_0808 protein networkhttps://string-db.org/network/207559.Dde_0808PFAM: Sodium:dicarboxylate symporter; KEGG: ctc:CTC02307 serine/threonine sodium symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
Dde_0809 protein networkhttps://string-db.org/network/207559.Dde_0809KEGG: dvl:Dvul_1033 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP.
Dde_0810 protein networkhttps://string-db.org/network/207559.Dde_0810PFAM: YheO-like; KEGG: dvl:Dvul_1030 YheO domain-containing protein.
Dde_0811 protein networkhttps://string-db.org/network/207559.Dde_0811PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: bvu:BVU_2073 Xaa-Pro aminopeptidase.
Dde_0812 protein networkhttps://string-db.org/network/207559.Dde_0812Formate dehydrogenase beta subunit; KEGG: dsa:Desal_2658 FdhB2.
Dde_0813 protein networkhttps://string-db.org/network/207559.Dde_0813TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; KEGG: das:Daes_2804 formate dehydrogenase subunit alpha; PFAM: Molybdopterin oxidor [...]
Dde_0814 protein networkhttps://string-db.org/network/207559.Dde_0814Hypothetical protein.
Dde_0816 protein networkhttps://string-db.org/network/207559.Dde_0816TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: glo:Glov_2955 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted [...]
Dde_0817 protein networkhttps://string-db.org/network/207559.Dde_0817Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Cystathionine beta-synthase, core; KEGG: dar:Daro_3975 GGDEF; SMART: Diguan [...]
Dde_0818 protein networkhttps://string-db.org/network/207559.Dde_0818PFAM: Type IV pilus assembly PilZ.
Dde_0819 protein networkhttps://string-db.org/network/207559.Dde_0819PFAM: Patatin; KEGG: dvm:DvMF_0660 patatin.
Dde_0820 protein networkhttps://string-db.org/network/207559.Dde_0820KEGG: dvm:DvMF_0699 putative two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, rec [...]
Dde_0821 protein networkhttps://string-db.org/network/207559.Dde_0821PFAM: Type IV pilus assembly PilZ; KEGG: dvl:Dvul_3074 hypothetical protein.
Dde_0822 protein networkhttps://string-db.org/network/207559.Dde_0822PFAM: UBA/THIF-type NAD/FAD binding fold; Nitroreductase-like; KEGG: dvm:DvMF_0692 hypothetical protein.
Dde_0823 protein networkhttps://string-db.org/network/207559.Dde_0823PEP motif putative anchor domain protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial.
Dde_0824 protein networkhttps://string-db.org/network/207559.Dde_0824KEGG: dvm:DvMF_0695 CAAX prenyl protease-related protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein.
Dde_0825 protein networkhttps://string-db.org/network/207559.Dde_0825PFAM: Biotin/lipoyl attachment; KEGG: dvm:DvMF_0696 secretion protein HlyD family protein.
Dde_0826 protein networkhttps://string-db.org/network/207559.Dde_0826Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_0697 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_0827 protein networkhttps://string-db.org/network/207559.Dde_0827PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dvl:Dvul_3083 hypothetical protein.
Dde_0828 protein networkhttps://string-db.org/network/207559.Dde_0828KEGG: dvl:Dvul_3073 TPR repeat-containing protein; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, putative; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4.
Dde_0829 protein networkhttps://string-db.org/network/207559.Dde_0829KEGG: dvm:DvMF_0690 sugar transferase, PEP-Cterm system associated; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Sugar transferase, PEP-CTERM system associated; [...]
Dde_0830 protein networkhttps://string-db.org/network/207559.Dde_0830KEGG: dvu:DVUA0038 capsular polysaccharide transport protein; TIGRFAM: PEP-CTERM, putative polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain.
Dde_0831 protein networkhttps://string-db.org/network/207559.Dde_0831KEGG: dvl:Dvul_3070 lipopolysaccharide biosynthesis; TIGRFAM: PEP-CTERM locus polysaccharide chain length determinant; PFAM: Lipopolysaccharide biosynthesis.
Dde_0832 protein networkhttps://string-db.org/network/207559.Dde_0832Non-specific protein-tyrosine kinase; KEGG: dvm:DvMF_0687 exopolysaccharide/PEPCTERM locus tyrosine autokinase.
Dde_0833 protein networkhttps://string-db.org/network/207559.Dde_0833KEGG: dvl:Dvul_3068 AAA ATPase; TIGRFAM: ATPase, secretion system, PEP-CTERM, predicted; SMART: ATPase, AAA+ type, core.
Dde_0834 protein networkhttps://string-db.org/network/207559.Dde_0834TIGRFAM: PEP-CTERM, conserved hypothetical protein CHP03016; KEGG: dvm:DvMF_0685 PEP-Cterm system associated protein.
Dde_0836 protein networkhttps://string-db.org/network/207559.Dde_0836KEGG: gsu:GSU1955 CapK related-protein.
Dde_0837 protein networkhttps://string-db.org/network/207559.Dde_0837PFAM: Glycosyl transferase, family 2; KEGG: sur:STAUR_7881 glycosyl transferase group 2 family protein.
Dde_0838 protein networkhttps://string-db.org/network/207559.Dde_0838PFAM: Glycosyl transferase, group 1; KEGG: tgr:Tgr7_2364 glycosyltransferase-like protein.
Dde_0839 protein networkhttps://string-db.org/network/207559.Dde_0839PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; KEGG: gme:Gmet_2004 glycosyl transferase, group 1.
Dde_0840 protein networkhttps://string-db.org/network/207559.Dde_0840Hypothetical protein; KEGG: sus:Acid_6877 fibronectin, type III domain-containing protein.
Dde_0841 protein networkhttps://string-db.org/network/207559.Dde_0841PFAM: ABC-2 type transporter; KEGG: hau:Haur_1034 ABC-2 type transporter.
Dde_0842 protein networkhttps://string-db.org/network/207559.Dde_0842PFAM: Asparagine synthase; KEGG: eba:ebA4312 hypothetical protein.
Dde_0843 protein networkhttps://string-db.org/network/207559.Dde_0843PFAM: Glycosyl transferase, family 2; KEGG: rmr:Rmar_0575 glycosyl transferase family 2.
Dde_0844 protein networkhttps://string-db.org/network/207559.Dde_0844PFAM: Glycosyl transferase, family 2; KEGG: pab:PAB0772 glycosyl transferase.
Dde_0845 protein networkhttps://string-db.org/network/207559.Dde_0845PFAM: O-antigen ligase-related; KEGG: gsu:GSU1954 hypothetical protein.
Dde_0846 protein networkhttps://string-db.org/network/207559.Dde_0846PFAM: Glycosyl transferase, group 1; KEGG: maq:Maqu_1638 glycosyl transferase, group 1.
Dde_0847 protein networkhttps://string-db.org/network/207559.Dde_0847Eight transmembrane protein EpsH; KEGG: dvu:DVUA0055 hypothetical protein; TIGRFAM: Exosortase, EpsH; PFAM: Exosortase EpsH-related.
Dde_0848 protein networkhttps://string-db.org/network/207559.Dde_0848EpsI family protein; TIGRFAM: Methanolan biosynthesis EpsI; KEGG: gem:GM21_2446 EpsI family protein.
Dde_0849 protein networkhttps://string-db.org/network/207559.Dde_0849TIGRFAM: Signal transduction histidine kinase, PEP-CTERM system, putative; PFAM: ATP-binding region, ATPase-like; KEGG: dvl:Dvul_3043 integral membrane sensor signal transduction histidine kinase [...]
Dde_0850 protein networkhttps://string-db.org/network/207559.Dde_0850Two component, sigma54 specific, transcriptional regulator, Fis family; TIGRFAM: Signal transduction response regulator, PEP-CTERM system, putative; PFAM: RNA polymerase sigma factor 54, interact [...]
Dde_0851 protein networkhttps://string-db.org/network/207559.Dde_0851Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; KEGG: ttr:Tter_2802 ABC transporter related protein; SMART: ATPase, AAA+ type, core.
Dde_0857 protein networkhttps://string-db.org/network/207559.Dde_0857CRISPR-associated protein Cas2; KEGG: gur:Gura_0837 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cas2; PFAM: CRISPR-associated protein, Cas2.
Dde_0860 protein networkhttps://string-db.org/network/207559.Dde_0860KEGG: mpl:Mpal_1603 CRISPR-associated protein, CSE3 family; TIGRFAM: CRISPR-associated protein, CT1974; PFAM: CRISPR-associated protein, CT1974.
Dde_0861 protein networkhttps://string-db.org/network/207559.Dde_0861KEGG: mpl:Mpal_1604 CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein, Cas5e-type; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5e-type.
Dde_0862 protein networkhttps://string-db.org/network/207559.Dde_0862KEGG: mbu:Mbur_0596 CRISPR-associated CSE4 family protein; TIGRFAM: CRISPR-associated protein, CT1975; PFAM: CRISPR-associated protein, CT1975.
Dde_0863 protein networkhttps://string-db.org/network/207559.Dde_0863CRISPR-associated protein, Cse2 family; KEGG: mbu:Mbur_0595 hypothetical protein; TIGRFAM: CRISPR-associated protein Cse2; PFAM: CRISPR-associated protein Cse2.
Dde_0864 protein networkhttps://string-db.org/network/207559.Dde_0864KEGG: rsc:RCFBP_11058 CRISPR-associated protein, CSE1 family; TIGRFAM: CRISPR-associated protein Cse1; PFAM: CRISPR-associated protein Cse1.
Dde_0865 protein networkhttps://string-db.org/network/207559.Dde_0865Metal dependent phosphohydrolase; KEGG: mpl:Mpal_1608 CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; SMART: DNA/RNA helicase, C-terminal; Metal-dependent phosph [...]
Dde_0867 protein networkhttps://string-db.org/network/207559.Dde_0867Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: atm:ANT_28300 putative signaling protein; SMART: Digua [...]
Dde_0868 protein networkhttps://string-db.org/network/207559.Dde_0868PFAM: Cation/H+ exchanger; KEGG: noc:Noc_0521 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
Dde_0869 protein networkhttps://string-db.org/network/207559.Dde_0869PFAM: Integrase, catalytic core; KEGG: swd:Swoo_3827 hypothetical protein.
Dde_0871 protein networkhttps://string-db.org/network/207559.Dde_0871KEGG: dma:DMR_19500 putative molybdenum-pterin binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1.
Dde_0872 protein networkhttps://string-db.org/network/207559.Dde_0872PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: swo:Swol_0117 alginate O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
Dde_0873 protein networkhttps://string-db.org/network/207559.Dde_0873KEGG: abu:Abu_1806 hypothetical protein.
Dde_0876 protein networkhttps://string-db.org/network/207559.Dde_0876PFAM: Uncharacterized protein family UPF0324, prokaryote; KEGG: dba:Dbac_2656 hypothetical protein.
Dde_0877 protein networkhttps://string-db.org/network/207559.Dde_0877KEGG: dba:Dbac_2655 hypothetical protein.
Dde_0878 protein networkhttps://string-db.org/network/207559.Dde_0878KEGG: dba:Dbac_2654 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor regi [...]
Dde_0879 protein networkhttps://string-db.org/network/207559.Dde_0879KEGG: dba:Dbac_2653 putative two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, rec [...]
Dde_0880 protein networkhttps://string-db.org/network/207559.Dde_0880PFAM: Auxin efflux carrier; KEGG: dvl:Dvul_1673 auxin efflux carrier.
Dde_0881 protein networkhttps://string-db.org/network/207559.Dde_0881PFAM: Glycosyl transferase, group 1; KEGG: dol:Dole_2052 glycosyl transferase group 1.
Dde_0882 protein networkhttps://string-db.org/network/207559.Dde_0882Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
Dde_0884 protein networkhttps://string-db.org/network/207559.Dde_0884KEGG: dat:HRM2_02360 hypothetical protein.
Dde_0885 protein networkhttps://string-db.org/network/207559.Dde_0885KEGG: dvm:DvMF_2088 hypothetical protein.
Dde_0886 protein networkhttps://string-db.org/network/207559.Dde_0886SMART: Diguanylate cyclase, predicted; HAMP linker domain; TIGRFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_1014 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; HAMP linker doma [...]
Dde_0888 protein networkhttps://string-db.org/network/207559.Dde_0888PFAM: Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme; KEGG: dvm:DvMF_1152 hypothetical protein.
Dde_0890 protein networkhttps://string-db.org/network/207559.Dde_0890KEGG: vpa:VP1840 hypothetical protein.
Dde_0891 protein networkhttps://string-db.org/network/207559.Dde_0891KEGG: dol:Dole_0435 hypothetical protein.
Dde_0892 protein networkhttps://string-db.org/network/207559.Dde_0892KEGG: dly:Dehly_1699 hypothetical protein.
lexA protein networkhttps://string-db.org/network/207559.Dde_0893SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, R [...]
Dde_0894 protein networkhttps://string-db.org/network/207559.Dde_0894Hypothetical protein.
Dde_0895 protein networkhttps://string-db.org/network/207559.Dde_0895KEGG: dbr:Deba_1843 bacteriophage-related protein.
Dde_0896 protein networkhttps://string-db.org/network/207559.Dde_0896KEGG: dly:Dehly_1703 resolvase domain-containing protein; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal.
Dde_0897 protein networkhttps://string-db.org/network/207559.Dde_0897KEGG: das:Daes_1578 putative phage-like protein.
Dde_0899 protein networkhttps://string-db.org/network/207559.Dde_0899KEGG: sfu:Sfum_3782 hypothetical protein.
Dde_0900 protein networkhttps://string-db.org/network/207559.Dde_0900TIGRFAM: RNA polymerase sigma-70; KEGG: dbr:Deba_1837 RNA polymerase, sigma-24 subunit, ECF subfamily.
Dde_0901 protein networkhttps://string-db.org/network/207559.Dde_0901KEGG: sfu:Sfum_3784 hypothetical protein.
Dde_0902 protein networkhttps://string-db.org/network/207559.Dde_0902KEGG: dly:Dehly_1694 hypothetical protein.
Dde_0903 protein networkhttps://string-db.org/network/207559.Dde_0903KEGG: sfu:Sfum_3786 hypothetical protein.
Dde_0904 protein networkhttps://string-db.org/network/207559.Dde_0904PFAM: Protein of unknown function DUF669; KEGG: das:Daes_1590 hypothetical protein.
Dde_0905 protein networkhttps://string-db.org/network/207559.Dde_0905PFAM: ERCC4 domain; KEGG: dly:Dehly_1691 ERCC4 domain-containing protein.
Dde_0906 protein networkhttps://string-db.org/network/207559.Dde_0906KEGG: dly:Dehly_1690 UvrD/REP helicase.
Dde_0907 protein networkhttps://string-db.org/network/207559.Dde_0907PFAM: DNA primase, catalytic core, N-terminal; KEGG: geb:GM18_2979 DNA primase catalytic core domain-containing protein.
Dde_0908 protein networkhttps://string-db.org/network/207559.Dde_0908PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: geb:GM18_2977 filamentation induced by cAMP protein Fic.
Dde_0910 protein networkhttps://string-db.org/network/207559.Dde_0910KEGG: geb:GM18_2976 hypothetical protein.
Dde_0911 protein networkhttps://string-db.org/network/207559.Dde_0911KEGG: dbr:Deba_1827 hypothetical protein.
Dde_0912 protein networkhttps://string-db.org/network/207559.Dde_0912Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: dbr:Deba_1826 integrase family protein; Belongs to the 'phage' integrase family.
Dde_0913 protein networkhttps://string-db.org/network/207559.Dde_0913KEGG: geb:GM18_2972 hypothetical protein; Belongs to the 'phage' integrase family.
Dde_0914 protein networkhttps://string-db.org/network/207559.Dde_0914KEGG: dly:Dehly_1683 hypothetical protein.
Dde_0915 protein networkhttps://string-db.org/network/207559.Dde_0915KEGG: sfu:Sfum_3799 hypothetical protein.
Dde_0916 protein networkhttps://string-db.org/network/207559.Dde_0916KEGG: sfu:Sfum_3800 hypothetical protein.
Dde_0917 protein networkhttps://string-db.org/network/207559.Dde_0917KEGG: dbr:Deba_1821 hypothetical protein.
Dde_0918 protein networkhttps://string-db.org/network/207559.Dde_0918KEGG: dbr:Deba_1820 hypothetical protein.
Dde_0919 protein networkhttps://string-db.org/network/207559.Dde_0919KEGG: geb:GM18_2966 phage head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage putative head morphogenesis protein, SPP1 gp7.
Dde_0920 protein networkhttps://string-db.org/network/207559.Dde_0920KEGG: sfu:Sfum_3804 hypothetical protein.
Dde_0921 protein networkhttps://string-db.org/network/207559.Dde_0921KEGG: sfu:Sfum_3805 hypothetical protein.
Dde_0922 protein networkhttps://string-db.org/network/207559.Dde_0922Site-specific DNA-methyltransferase (adenine-specific); PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: geb:GM18_2963 adenine-specific DNA-methyltransferase; SMART: Basic-leucine [...]
Dde_0923 protein networkhttps://string-db.org/network/207559.Dde_0923KEGG: dly:Dehly_1674 hypothetical protein.
Dde_0924 protein networkhttps://string-db.org/network/207559.Dde_0924KEGG: dbr:Deba_1814 hypothetical protein.
Dde_0925 protein networkhttps://string-db.org/network/207559.Dde_0925KEGG: dbr:Deba_1813 hypothetical protein.
Dde_0926 protein networkhttps://string-db.org/network/207559.Dde_0926KEGG: geb:GM18_2959 hypothetical protein.
Dde_0927 protein networkhttps://string-db.org/network/207559.Dde_0927KEGG: sfu:Sfum_3811 hypothetical protein.
Dde_0928 protein networkhttps://string-db.org/network/207559.Dde_0928KEGG: das:Daes_1619 hypothetical protein.
Dde_0929 protein networkhttps://string-db.org/network/207559.Dde_0929KEGG: das:Daes_1620 hypothetical protein.
Dde_0930 protein networkhttps://string-db.org/network/207559.Dde_0930KEGG: dly:Dehly_1658 hypothetical protein.
Dde_0931 protein networkhttps://string-db.org/network/207559.Dde_0931KEGG: geb:GM18_2954 phage tail sheath protein.
Dde_0932 protein networkhttps://string-db.org/network/207559.Dde_0932PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; KEGG: sfu:Sfum_3816 hypothetical protein.
Dde_0933 protein networkhttps://string-db.org/network/207559.Dde_0933KEGG: dbr:Deba_1799 hypothetical protein.
Dde_0934 protein networkhttps://string-db.org/network/207559.Dde_0934KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region.
Dde_0935 protein networkhttps://string-db.org/network/207559.Dde_0935KEGG: dly:Dehly_1653 hypothetical protein.
Dde_0936 protein networkhttps://string-db.org/network/207559.Dde_0936KEGG: dly:Dehly_1652 hypothetical protein.
Dde_0937 protein networkhttps://string-db.org/network/207559.Dde_0937KEGG: dbr:Deba_1795 hypothetical protein.
Dde_0938 protein networkhttps://string-db.org/network/207559.Dde_0938KEGG: dly:Dehly_1650 phage protein D-like protein.
Dde_0939 protein networkhttps://string-db.org/network/207559.Dde_0939PFAM: Peptidase M15A, C-terminal; KEGG: sfu:Sfum_3823 peptidase M15A.
Dde_0940 protein networkhttps://string-db.org/network/207559.Dde_0940PFAM: Protein of unknown function DUF1353; KEGG: dly:Dehly_1648 hypothetical protein.
Dde_0941 protein networkhttps://string-db.org/network/207559.Dde_0941KEGG: sfu:Sfum_3825 hypothetical protein.
Dde_0942 protein networkhttps://string-db.org/network/207559.Dde_0942KEGG: dly:Dehly_1646 hypothetical protein.
Dde_0943 protein networkhttps://string-db.org/network/207559.Dde_0943KEGG: dly:Dehly_1645 PaaR repeat-containing protein.
Dde_0944 protein networkhttps://string-db.org/network/207559.Dde_0944KEGG: das:Daes_1636 hypothetical protein.
Dde_0945 protein networkhttps://string-db.org/network/207559.Dde_0945KEGG: sfu:Sfum_3830 hypothetical protein.
Dde_0946 protein networkhttps://string-db.org/network/207559.Dde_0946GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: das:Daes_1638 gpW/GP25 family protein.
Dde_0947 protein networkhttps://string-db.org/network/207559.Dde_0947PFAM: Baseplate assembly protein J-like, predicted; KEGG: das:Daes_1639 baseplate J family protein.
Dde_0948 protein networkhttps://string-db.org/network/207559.Dde_0948KEGG: das:Daes_1640 phage tail protein; TIGRFAM: Phage tail protein; PFAM: Phage tail protein I.
Dde_0949 protein networkhttps://string-db.org/network/207559.Dde_0949KEGG: sfu:Sfum_3834 hypothetical protein.
Dde_0950 protein networkhttps://string-db.org/network/207559.Dde_0950KEGG: sfu:Sfum_3835 hypothetical protein.
Dde_0953 protein networkhttps://string-db.org/network/207559.Dde_0953KEGG: sfu:Sfum_3837 hypothetical protein.
Dde_0954 protein networkhttps://string-db.org/network/207559.Dde_0954KEGG: dly:Dehly_1635 BNR repeat-containing glycosyl hydrolase.
Dde_0955 protein networkhttps://string-db.org/network/207559.Dde_0955KEGG: dly:Dehly_1634 hypothetical protein.
Dde_0956 protein networkhttps://string-db.org/network/207559.Dde_0956KEGG: das:Daes_1647 putative amidoligase enzyme.
Dde_0957 protein networkhttps://string-db.org/network/207559.Dde_0957KEGG: sfu:Sfum_3841 hypothetical protein.
Dde_0958 protein networkhttps://string-db.org/network/207559.Dde_0958KEGG: dly:Dehly_1631 glucosamine 6-phosphate synthetase-like protein.
Dde_0959 protein networkhttps://string-db.org/network/207559.Dde_0959AIG2 family protein; PFAM: AIG2-like; KEGG: dly:Dehly_1630 AIG2 family protein.
Dde_0960 protein networkhttps://string-db.org/network/207559.Dde_0960Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dap:Dacet_1489 transcriptional regulator, TetR family.
Dde_0961 protein networkhttps://string-db.org/network/207559.Dde_0961Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
Dde_0962 protein networkhttps://string-db.org/network/207559.Dde_0962KEGG: dau:Daud_2100 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_0963 protein networkhttps://string-db.org/network/207559.Dde_0963PFAM: Patatin; KEGG: tin:Tint_1838 patatin.
Dde_0965 protein networkhttps://string-db.org/network/207559.Dde_0965PFAM: Acriflavin resistance protein; KEGG: aco:Amico_0304 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Dde_0966 protein networkhttps://string-db.org/network/207559.Dde_0966KEGG: glo:Glov_2883 metal dependent phosphohydrolase; PFAM: Protein of unknown function DUF1113; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, H [...]
Dde_0967 protein networkhttps://string-db.org/network/207559.Dde_0967KEGG: dap:Dacet_1487 CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase, BadF/BadG/BcrA/BcrD type.
Dde_0970 protein networkhttps://string-db.org/network/207559.Dde_0970PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic.
Dde_0971 protein networkhttps://string-db.org/network/207559.Dde_0971PFAM: Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme; KEGG: dvl:Dvul_0572 hypothetical protein.
Dde_0972 protein networkhttps://string-db.org/network/207559.Dde_0972Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
Dde_0973 protein networkhttps://string-db.org/network/207559.Dde_0973PFAM: Protein of unknown function DUF456; KEGG: dsa:Desal_2028 hypothetical protein.
trmJ protein networkhttps://string-db.org/network/207559.Dde_0974tRNA/rRNA methyltransferase (SpoU); Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
Dde_0975 protein networkhttps://string-db.org/network/207559.Dde_0975PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: das:Daes_1853 pseudouridine synthase; Belongs to the pseudouridine synthase RluA family.
Dde_0976 protein networkhttps://string-db.org/network/207559.Dde_0976KEGG: dvl:Dvul_0580 hypothetical protein.
Dde_0977 protein networkhttps://string-db.org/network/207559.Dde_0977KEGG: sfu:Sfum_1664 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal tra [...]
rny protein networkhttps://string-db.org/network/207559.Dde_09782,3 cyclic-nucleotide 2-phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
Dde_0979 protein networkhttps://string-db.org/network/207559.Dde_0979KEGG: dvm:DvMF_1183 hypothetical protein.
Dde_0980 protein networkhttps://string-db.org/network/207559.Dde_0980KEGG: dvl:Dvul_0587 hypothetical protein.
glmU protein networkhttps://string-db.org/network/207559.Dde_0981UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyz [...]
atpC protein networkhttps://string-db.org/network/207559.Dde_0984ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
atpD protein networkhttps://string-db.org/network/207559.Dde_0985ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase [...]
atpG protein networkhttps://string-db.org/network/207559.Dde_0986ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...]
atpA protein networkhttps://string-db.org/network/207559.Dde_0987ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains fa [...]
atpH protein networkhttps://string-db.org/network/207559.Dde_0988ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpF protein networkhttps://string-db.org/network/207559.Dde_0989ATP synthase subunit b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramemb [...]
atpF-2 protein networkhttps://string-db.org/network/207559.Dde_0990H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
Dde_0991 protein networkhttps://string-db.org/network/207559.Dde_0991PFAM: Protein of unknown function DUF583; KEGG: dvm:DvMF_2825 protein of unknown function DUF583.
mrdB protein networkhttps://string-db.org/network/207559.Dde_0992Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
Dde_0993 protein networkhttps://string-db.org/network/207559.Dde_0993TIGRFAM: Penicillin-binding protein 2; KEGG: dvl:Dvul_2187 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
Dde_0994 protein networkhttps://string-db.org/network/207559.Dde_0994KEGG: dvl:Dvul_2186 hypothetical protein.
Dde_0995 protein networkhttps://string-db.org/network/207559.Dde_0995Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
Dde_0996 protein networkhttps://string-db.org/network/207559.Dde_0996KEGG: dvm:DvMF_2820 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl.
Dde_0997 protein networkhttps://string-db.org/network/207559.Dde_0997TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM; KEGG: dvm:DvMF_2819 conserved hypothetical radical SAM protein; SMART: Elongator protein 3/MiaB/NifB.
Dde_0998 protein networkhttps://string-db.org/network/207559.Dde_0998KEGG: dvm:DvMF_2818 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methy [...]
Dde_0999 protein networkhttps://string-db.org/network/207559.Dde_0999Malto-oligosyltrehalose trehalohydrolase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: mta:Moth_1809 malto-oligosylt [...]
Dde_1000 protein networkhttps://string-db.org/network/207559.Dde_1000KEGG: dvm:DvMF_2817 hypothetical protein.
Dde_1001 protein networkhttps://string-db.org/network/207559.Dde_1001KEGG: dsa:Desal_3145 hypothetical protein.
msrA protein networkhttps://string-db.org/network/207559.Dde_1002Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methioni [...]
msrB-2 protein networkhttps://string-db.org/network/207559.Dde_1003Peptide methionine sulfoxide reductase msrB; PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB; KEGG: bph:Bph [...]
Dde_1005 protein networkhttps://string-db.org/network/207559.Dde_1005Hypothetical protein.
Dde_1006 protein networkhttps://string-db.org/network/207559.Dde_1006Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: dvm:DvMF_2816 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
purC protein networkhttps://string-db.org/network/207559.Dde_1007TIGRFAM: SAICAR synthetase; KEGG: dvm:DvMF_2815 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.
hisD protein networkhttps://string-db.org/network/207559.Dde_1008Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
Dde_1010 protein networkhttps://string-db.org/network/207559.Dde_1010KEGG: dvm:DvMF_2846 hypothetical protein.
Dde_1011 protein networkhttps://string-db.org/network/207559.Dde_1011KEGG: dvm:DvMF_2846 hypothetical protein.
uvrC protein networkhttps://string-db.org/network/207559.Dde_1014Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
Dde_1015 protein networkhttps://string-db.org/network/207559.Dde_1015Histidine kinase; KEGG: met:M446_5170 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, [...]
Dde_1016 protein networkhttps://string-db.org/network/207559.Dde_1016KEGG: dvm:DvMF_2843 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver reg [...]
Dde_1017 protein networkhttps://string-db.org/network/207559.Dde_1017KEGG: dvm:DvMF_2842 hypothetical protein.
Dde_1018 protein networkhttps://string-db.org/network/207559.Dde_1018KEGG: dvm:DvMF_2841 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
mnmA protein networkhttps://string-db.org/network/207559.Dde_1019tRNA methyl transferase-like protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
gatA protein networkhttps://string-db.org/network/207559.Dde_1020glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl- [...]
gatC protein networkhttps://string-db.org/network/207559.Dde_1021glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
Dde_1022 protein networkhttps://string-db.org/network/207559.Dde_1022KEGG: dvm:DvMF_2836 hypothetical protein.
dnaK protein networkhttps://string-db.org/network/207559.Dde_1023Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
Dde_1024 protein networkhttps://string-db.org/network/207559.Dde_1024KEGG: mma:MM_0051 hypothetical protein.
grpE protein networkhttps://string-db.org/network/207559.Dde_1025GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleot [...]
hrcA protein networkhttps://string-db.org/network/207559.Dde_1026Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
Dde_1027 protein networkhttps://string-db.org/network/207559.Dde_1027PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvl:Dvul_2163 redoxin domain-containing protein.
Dde_1028 protein networkhttps://string-db.org/network/207559.Dde_1028AsmA family protein; PFAM: AsmA; KEGG: dvm:DvMF_2863 AsmA family protein.
Dde_1029 protein networkhttps://string-db.org/network/207559.Dde_1029PFAM: Type IV pilus assembly PilZ; KEGG: gsu:GSU0943 hypothetical protein.
cobQ protein networkhttps://string-db.org/network/207559.Dde_1030Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for eac [...]
Dde_1031 protein networkhttps://string-db.org/network/207559.Dde_1031KEGG: dvl:Dvul_0730 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_1032 protein networkhttps://string-db.org/network/207559.Dde_1032TIGRFAM: Pyruvate kinase; KEGG: dvm:DvMF_0965 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; Belongs to the pyruvate kinase family.
mraZ protein networkhttps://string-db.org/network/207559.Dde_1033TIGRFAM: MraZ; KEGG: dvl:Dvul_0732 cell division protein MraZ; Belongs to the MraZ family.
rsmH protein networkhttps://string-db.org/network/207559.Dde_1034Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
Dde_1035 protein networkhttps://string-db.org/network/207559.Dde_1035KEGG: dvm:DvMF_0962 hypothetical protein.
Dde_1036 protein networkhttps://string-db.org/network/207559.Dde_1036Peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; KEGG: dvm:DvMF_0961 peptidoglycan glycosyltransferase; [...]
murE protein networkhttps://string-db.org/network/207559.Dde_1037UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of b [...]
Dde_1038 protein networkhttps://string-db.org/network/207559.Dde_1038UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptid [...]
mraY protein networkhttps://string-db.org/network/207559.Dde_1039phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murD protein networkhttps://string-db.org/network/207559.Dde_1040UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF f [...]
Dde_1041 protein networkhttps://string-db.org/network/207559.Dde_1041KEGG: dvm:DvMF_0957 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; Belongs to the SEDS family.
murG protein networkhttps://string-db.org/network/207559.Dde_1042Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid interme [...]
murC protein networkhttps://string-db.org/network/207559.Dde_1043UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murB protein networkhttps://string-db.org/network/207559.Dde_1044UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
Dde_1045 protein networkhttps://string-db.org/network/207559.Dde_1045Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
ftsA protein networkhttps://string-db.org/network/207559.Dde_1046Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
ftsZ protein networkhttps://string-db.org/network/207559.Dde_1047Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
Dde_1049 protein networkhttps://string-db.org/network/207559.Dde_1049KEGG: dvm:DvMF_0947 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
ribB protein networkhttps://string-db.org/network/207559.Dde_10503,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
htpX protein networkhttps://string-db.org/network/207559.Dde_1051PFAM: Peptidase M48, Ste24p; KEGG: dvm:DvMF_0946 peptidase M48 Ste24p; Belongs to the peptidase M48B family.
Dde_1052 protein networkhttps://string-db.org/network/207559.Dde_1052PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_0945 4Fe-4S ferredoxin iron-sulfur binding domain protein.
trpF protein networkhttps://string-db.org/network/207559.Dde_1054PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dvu:DVU2492 N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
Dde_1055 protein networkhttps://string-db.org/network/207559.Dde_1055KEGG: dvm:DvMF_0941 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_1057 protein networkhttps://string-db.org/network/207559.Dde_1057KEGG: dvu:DVU2490 histidinol phosphatase; TIGRFAM: Histidinol phosphate phosphatase, HisJ; PFAM: PHP, C-terminal; Belongs to the PHP hydrolase family. HisK subfamily.
Dde_1058 protein networkhttps://string-db.org/network/207559.Dde_1058PFAM: Late competence development protein ComFB; KEGG: dvm:DvMF_0939 hypothetical protein.
Dde_1059 protein networkhttps://string-db.org/network/207559.Dde_1059KEGG: dma:DMR_38850 PhoH-like protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc.
Dde_1060 protein networkhttps://string-db.org/network/207559.Dde_1060Phosphate ABC transporter, inner membrane subunit PstA; KEGG: dvu:DVU2479 phosphate ABC transporter permease; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-depende [...]
Dde_1061 protein networkhttps://string-db.org/network/207559.Dde_1061Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across th [...]
Dde_1062 protein networkhttps://string-db.org/network/207559.Dde_1062KEGG: dvl:Dvul_0765 phosphate binding protein; TIGRFAM: Phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1.
Dde_1065 protein networkhttps://string-db.org/network/207559.Dde_1065KEGG: dvl:Dvul_0655 hypothetical protein.
Dde_1066 protein networkhttps://string-db.org/network/207559.Dde_1066Hypothetical protein.
Dde_1069 protein networkhttps://string-db.org/network/207559.Dde_1069TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: sun:SUN_1205 signal transduction response regulator; SMART: Diguanylate cyclase, predicted.
tal protein networkhttps://string-db.org/network/207559.Dde_1070Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
Dde_1071 protein networkhttps://string-db.org/network/207559.Dde_1071TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dvm:DvMF_1089 PAS/PAC sensor signal t [...]
Dde_1072 protein networkhttps://string-db.org/network/207559.Dde_1072KEGG: dvl:Dvul_0971 hypothetical protein.
Dde_1073 protein networkhttps://string-db.org/network/207559.Dde_1073KEGG: hmo:HM1_1653 eal domain protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
Dde_1074 protein networkhttps://string-db.org/network/207559.Dde_1074L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
Dde_1075 protein networkhttps://string-db.org/network/207559.Dde_1075PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dba:Dbac_2859 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_1076 protein networkhttps://string-db.org/network/207559.Dde_1076Nitrate reductase; KEGG: dvm:DvMF_0320 formate dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing ox [...]
Dde_1077 protein networkhttps://string-db.org/network/207559.Dde_1077KEGG: dma:DMR_29870 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP [...]
Dde_1078 protein networkhttps://string-db.org/network/207559.Dde_1078CheW protein; KEGG: dma:DMR_41440 chemotaxis protein CheW; PFAM: CheW-like protein; SMART: CheW-like protein.
Dde_1079 protein networkhttps://string-db.org/network/207559.Dde_1079KEGG: dvl:Dvul_1537 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs [...]
argJ protein networkhttps://string-db.org/network/207559.Dde_1081Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and [...]
secA protein networkhttps://string-db.org/network/207559.Dde_1082Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
Dde_1085 protein networkhttps://string-db.org/network/207559.Dde_1085PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; KEGG: dvm:DvMF_2874 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_1086 protein networkhttps://string-db.org/network/207559.Dde_1086KEGG: mag:amb4194 hypothetical protein.
Dde_1087 protein networkhttps://string-db.org/network/207559.Dde_1087D-lactate dehydrogenase (cytochrome); KEGG: dvu:DVU0827 glycolate oxidase subunit GlcD; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
smpB protein networkhttps://string-db.org/network/207559.Dde_1088SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
Dde_1089 protein networkhttps://string-db.org/network/207559.Dde_1089Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...]
Dde_1090 protein networkhttps://string-db.org/network/207559.Dde_1090KEGG: dvm:DvMF_2878 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr prot [...]
Dde_1091 protein networkhttps://string-db.org/network/207559.Dde_1091PFAM: Phosphotransferase system, mannose/fructose/sorbose family IID component; KEGG: dvm:DvMF_2879 PTS system mannose/fructose/sorbose family IID component.
rsmI protein networkhttps://string-db.org/network/207559.Dde_1092Protein of unknown function UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
Dde_1093 protein networkhttps://string-db.org/network/207559.Dde_1093PFAM: Uncharacterized protein family UPF0102; KEGG: dvm:DvMF_2881 hypothetical protein; Belongs to the UPF0102 family.
rnhB protein networkhttps://string-db.org/network/207559.Dde_1094Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
rplS protein networkhttps://string-db.org/network/207559.Dde_1095Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
trmD protein networkhttps://string-db.org/network/207559.Dde_1096tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rimM protein networkhttps://string-db.org/network/207559.Dde_109716S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
Dde_1098 protein networkhttps://string-db.org/network/207559.Dde_1098KEGG: dsa:Desal_0196 hypothetical protein; Belongs to the UPF0109 family.
rpsP protein networkhttps://string-db.org/network/207559.Dde_1099KEGG: dvl:Dvul_2142 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
ffh protein networkhttps://string-db.org/network/207559.Dde_1100Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
Dde_1102 protein networkhttps://string-db.org/network/207559.Dde_1102PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dma:DMR_43010 sulfate transporter family protein.
Dde_1103 protein networkhttps://string-db.org/network/207559.Dde_1103KEGG: dvm:DvMF_2889 aspartate aminotransferase; PFAM: Aminotransferase, class I/II.
Dde_1104 protein networkhttps://string-db.org/network/207559.Dde_1104PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dap:Dacet_0115 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
Dde_1105 protein networkhttps://string-db.org/network/207559.Dde_1105KEGG: dvl:Dvul_2139 hypothetical protein.
Dde_1106 protein networkhttps://string-db.org/network/207559.Dde_1106KEGG: dvm:DvMF_2891 5-enolpyruvylshikimate-3-phosphate synthase-like protein.
Dde_1109 protein networkhttps://string-db.org/network/207559.Dde_1109KEGG: dvl:Dvul_2137 adenylylsulfate reductase subunit beta; TIGRFAM: Adenylylsulphate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
Dde_1110 protein networkhttps://string-db.org/network/207559.Dde_1110TIGRFAM: Adenylylsulphate reductase, alpha subunit; KEGG: dvl:Dvul_2136 adenylylsulfate reductase subunit alpha.
Dde_1111 protein networkhttps://string-db.org/network/207559.Dde_1111Quinone-interacting membrane-bound oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: dvl:Dvul_2135 FAD-dependent pyridine nucleotide-disulfide oxido [...]
Dde_1112 protein networkhttps://string-db.org/network/207559.Dde_1112Quinone-interacting membrane-bound oxidoreductase; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Fumarate reductase/succinate dehyd [...]
Dde_1113 protein networkhttps://string-db.org/network/207559.Dde_1113Quinone-interacting membrane-bound oxidoreductase; KEGG: dvl:Dvul_2133 heterodisulfide reductase, transmembrane subunit.
Dde_1114 protein networkhttps://string-db.org/network/207559.Dde_1114KEGG: dvl:Dvul_2132 hypothetical protein.
Dde_1115 protein networkhttps://string-db.org/network/207559.Dde_1115KEGG: dvm:DvMF_2907 hypothetical protein.
Dde_1116 protein networkhttps://string-db.org/network/207559.Dde_1116MJ0042 family finger-like protein; KEGG: dvl:Dvul_2123 hypothetical protein; TIGRFAM: Zinc finger/thioredoxin putative; PFAM: Protein of unknown function DUF2143.
Dde_1117 protein networkhttps://string-db.org/network/207559.Dde_1117PFAM: Glycosyl transferase, family 2; KEGG: dvu:DVU4019 hypothetical protein.
Dde_1118 protein networkhttps://string-db.org/network/207559.Dde_1118PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_2910 glycosyl transferase group 1.
Dde_1119 protein networkhttps://string-db.org/network/207559.Dde_1119KEGG: dvm:DvMF_2911 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS.
Dde_1120 protein networkhttps://string-db.org/network/207559.Dde_1120Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the [...]
Dde_1121 protein networkhttps://string-db.org/network/207559.Dde_1121PFAM: Peptidase M22, glycoprotease; KEGG: dvm:DvMF_2913 peptidase M22 glycoprotease.
Dde_1122 protein networkhttps://string-db.org/network/207559.Dde_1122TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; KEGG: dvm:DvMF_2914 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF.
dxr protein networkhttps://string-db.org/network/207559.Dde_11231-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
Dde_1124 protein networkhttps://string-db.org/network/207559.Dde_1124KEGG: dvm:DvMF_2916 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase.
Dde_1125 protein networkhttps://string-db.org/network/207559.Dde_1125PFAM: Phosphatidate cytidylyltransferase; KEGG: dvl:Dvul_2114 phosphatidate cytidylyltransferase; Belongs to the CDS family.
Dde_1126 protein networkhttps://string-db.org/network/207559.Dde_1126Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
frr protein networkhttps://string-db.org/network/207559.Dde_1128Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/207559.Dde_1129Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
Dde_1130 protein networkhttps://string-db.org/network/207559.Dde_1130PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_2921 glycosyl transferase family 2.
Dde_1131 protein networkhttps://string-db.org/network/207559.Dde_1131KEGG: das:Daes_3071 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
tsf protein networkhttps://string-db.org/network/207559.Dde_1132Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
rpsB protein networkhttps://string-db.org/network/207559.Dde_1133Ribosomal protein S2; KEGG: dvm:DvMF_2924 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal pr [...]
Dde_1135 protein networkhttps://string-db.org/network/207559.Dde_1135PFAM: Asparagine synthase; KEGG: mag:amb0042 asparagine synthase.
Dde_1136 protein networkhttps://string-db.org/network/207559.Dde_1136KEGG: das:Daes_2174 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase.
rnj protein networkhttps://string-db.org/network/207559.Dde_1137RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or d [...]
Dde_1138 protein networkhttps://string-db.org/network/207559.Dde_1138KEGG: dvm:DvMF_2925 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like.
Dde_1140 protein networkhttps://string-db.org/network/207559.Dde_1140PFAM: MgtC/SapB transporter; KEGG: sfu:Sfum_1155 MgtC/SapB transporter.
Dde_1143 protein networkhttps://string-db.org/network/207559.Dde_1143KEGG: dvl:Dvul_2198 hypothetical protein.
Dde_1145 protein networkhttps://string-db.org/network/207559.Dde_1145KEGG: dvl:Dvul_2197 hypothetical protein.
Dde_1146 protein networkhttps://string-db.org/network/207559.Dde_1146PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvm:DvMF_1359 protein of unknown function DUF6 transmembrane.
htpG protein networkhttps://string-db.org/network/207559.Dde_1147ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
Dde_1148 protein networkhttps://string-db.org/network/207559.Dde_1148Hypothetical protein; KEGG: afn:Acfer_0225 biotin and thiamin synthesis associated.
Dde_1149 protein networkhttps://string-db.org/network/207559.Dde_1149KEGG: dvm:DvMF_1110 hypothetical protein.
Dde_1150 protein networkhttps://string-db.org/network/207559.Dde_1150PFAM: Rickettsia 17kDa surface antigen; KEGG: dvl:Dvul_0804 hypothetical protein.
Dde_1151 protein networkhttps://string-db.org/network/207559.Dde_1151KEGG: dvm:DvMF_1513 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_1152 protein networkhttps://string-db.org/network/207559.Dde_1152Hypothetical protein.
Dde_1153 protein networkhttps://string-db.org/network/207559.Dde_1153KEGG: dvl:Dvul_0621 hypothetical protein.
Dde_1154 protein networkhttps://string-db.org/network/207559.Dde_1154KEGG: dal:Dalk_1957 hypothetical protein.
Dde_1155 protein networkhttps://string-db.org/network/207559.Dde_1155KEGG: dvm:DvMF_1091 single-strand binding protein/primosomal replication protein N.
Dde_1156 protein networkhttps://string-db.org/network/207559.Dde_1156KEGG: dvm:DvMF_1092 hypothetical protein.
Dde_1157 protein networkhttps://string-db.org/network/207559.Dde_1157KEGG: dvm:DvMF_1093 hypothetical protein.
Dde_1158 protein networkhttps://string-db.org/network/207559.Dde_1158Putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dvm:DvMF_1094 putative phage repressor.
Dde_1159 protein networkhttps://string-db.org/network/207559.Dde_1159Hypothetical protein.
Dde_1161 protein networkhttps://string-db.org/network/207559.Dde_1161Hypothetical protein.
Dde_1162 protein networkhttps://string-db.org/network/207559.Dde_1162ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: hch:HCH_00143 amino acid ABC transporter periplasmic protein.
Dde_1164 protein networkhttps://string-db.org/network/207559.Dde_1164Alcohol dehydrogenase; KEGG: dvl:Dvul_0702 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_1165 protein networkhttps://string-db.org/network/207559.Dde_1165KEGG: dal:Dalk_0006 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine k [...]
Dde_1166 protein networkhttps://string-db.org/network/207559.Dde_1166Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: pca:Pcar_2558 signal transduction protein; [...]
Dde_1167 protein networkhttps://string-db.org/network/207559.Dde_1167Hypothetical protein.
Dde_1168 protein networkhttps://string-db.org/network/207559.Dde_1168KEGG: dvm:DvMF_1083 TPR repeat-containing protein.
Dde_1169 protein networkhttps://string-db.org/network/207559.Dde_1169KEGG: dvm:DvMF_3031 intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI.
Dde_1170 protein networkhttps://string-db.org/network/207559.Dde_1170PFAM: NADPH-dependent FMN reductase; KEGG: dvu:DVU0819 FMN reductase, NADPH-dependent.
Dde_1171 protein networkhttps://string-db.org/network/207559.Dde_1171Diguanylate cyclase; KEGG: dpr:Despr_1760 PAS/PAC sensor-containing diguanylate cyclase and hemerythrin-like metal-binding domain-containing protein; TIGRFAM: Diguanylate cyclase, predicted; SMAR [...]
Dde_1172 protein networkhttps://string-db.org/network/207559.Dde_1172TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; KEGG: rce:RC1_1438 AT [...]
Dde_1173 protein networkhttps://string-db.org/network/207559.Dde_1173PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: tau:Tola_1319 hypothetical protein.
glcB protein networkhttps://string-db.org/network/207559.Dde_1174Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to [...]
Dde_1175 protein networkhttps://string-db.org/network/207559.Dde_1175KEGG: rba:RB10458 RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1.
Dde_1177 protein networkhttps://string-db.org/network/207559.Dde_1177PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: rde:RD1_1003 hypothetical protein.
Dde_1178 protein networkhttps://string-db.org/network/207559.Dde_1178TIGRFAM: Dihydroxyacetone kinase DhaK, subunit 1; KEGG: dvl:Dvul_2009 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase.
Dde_1179 protein networkhttps://string-db.org/network/207559.Dde_1179KEGG: dvm:DvMF_2583 dihydroxyacetone kinase, L subunit; TIGRFAM: Dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase.
Dde_1180 protein networkhttps://string-db.org/network/207559.Dde_1180TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; Dihydroxyacetone kinase, subunit phosphotransferase; KEGG: dvm:DvMF_2584 phosphoeno [...]
Dde_1181 protein networkhttps://string-db.org/network/207559.Dde_1181SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: sfu:Sfum_3544 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: [...]
Dde_1182 protein networkhttps://string-db.org/network/207559.Dde_1182SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: sfu:Sfum_3545 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: [...]
Dde_1183 protein networkhttps://string-db.org/network/207559.Dde_1183ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ddf:DEFDS_2066 peptide/nickel ABC transporter permease.
Dde_1184 protein networkhttps://string-db.org/network/207559.Dde_1184ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ddf:DEFDS_2067 peptide/nickel ABC transporter permease.
Dde_1185 protein networkhttps://string-db.org/network/207559.Dde_1185ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ddf:DEFDS_2068 peptide/nickel ABC transporter substrate-binding protein.
Dde_1186 protein networkhttps://string-db.org/network/207559.Dde_1186PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: dvu:DVU2575 M20/M25/M40 family peptidase.
Dde_1188 protein networkhttps://string-db.org/network/207559.Dde_1188KEGG: das:Daes_1662 CACA family Na+/Ca+ antiporter; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region.
Dde_1189 protein networkhttps://string-db.org/network/207559.Dde_1189PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dba:Dbac_3139 hypothetical protein.
Dde_1190 protein networkhttps://string-db.org/network/207559.Dde_1190PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: dba:Dbac_3138 cobalt transport protein CbiM.
Dde_1191 protein networkhttps://string-db.org/network/207559.Dde_1191Additional component of nickel ABC transport system; KEGG: dba:Dbac_3137 hypothetical protein.
Dde_1192 protein networkhttps://string-db.org/network/207559.Dde_1192KEGG: dvm:DvMF_3138 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein.
Dde_1193 protein networkhttps://string-db.org/network/207559.Dde_1193Component of nickel ABC transport system; KEGG: dba:Dbac_3135 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_1194 protein networkhttps://string-db.org/network/207559.Dde_1194ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: dvm:DvMF_0301 extracellular solute-binding protein family 3.
Dde_1195 protein networkhttps://string-db.org/network/207559.Dde_1195PFAM: Nitroreductase-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dba:Dbac_0625 nitroreductase.
Dde_1196 protein networkhttps://string-db.org/network/207559.Dde_1196PFAM: CheC-like protein; KEGG: das:Daes_0677 CheC domain-containing protein.
Dde_1197 protein networkhttps://string-db.org/network/207559.Dde_1197KEGG: das:Daes_0046 metal-dependent hydrolase HDOD; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_1198 protein networkhttps://string-db.org/network/207559.Dde_1198MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
Dde_1200 protein networkhttps://string-db.org/network/207559.Dde_1200PFAM: Cyclic nucleotide-binding; KEGG: dsa:Desal_0411 Crp/Fnr family transcriptional regulator.
Dde_1201 protein networkhttps://string-db.org/network/207559.Dde_1201PFAM: Sulfatase; KEGG: dsa:Desal_0410 sulfatase.
Dde_1202 protein networkhttps://string-db.org/network/207559.Dde_1202Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: dsa:Desal_0409 thioredoxin.
Dde_1203 protein networkhttps://string-db.org/network/207559.Dde_1203Thioredoxin-disulfide reductase; KEGG: dsa:Desal_0408 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleo [...]
Dde_1204 protein networkhttps://string-db.org/network/207559.Dde_1204PFAM: Sodium/sulphate symporter; KEGG: dsa:Desal_0407 sodium/sulfate symporter.
Dde_1205 protein networkhttps://string-db.org/network/207559.Dde_1205PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dsa:Desal_0406 hypothetical protein.
Dde_1207 protein networkhttps://string-db.org/network/207559.Dde_1207KEGG: dsa:Desal_0602 heterodisulfide reductase, C subunit.
Dde_1208 protein networkhttps://string-db.org/network/207559.Dde_1208KEGG: dba:Dbac_0849 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich region, CCG.
Dde_1209 protein networkhttps://string-db.org/network/207559.Dde_1209PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: drt:Dret_0196 4Fe-4S ferredoxin iron-sulfur binding domain-cont [...]
Dde_1210 protein networkhttps://string-db.org/network/207559.Dde_1210PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; KEGG: dba:Dbac_0851 methyl-viologen-reducing hydrogenase delta subunit.
Dde_1211 protein networkhttps://string-db.org/network/207559.Dde_1211PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; KEGG: drt:Dret_2313 4Fe-4S ferredoxin iron-sulfur binding domain-contain [...]
Dde_1212 protein networkhttps://string-db.org/network/207559.Dde_1212KEGG: dba:Dbac_0853 hydrogenase, putative.
Dde_1213 protein networkhttps://string-db.org/network/207559.Dde_1213Sulfhydrogenase subunit gamma (sulfur reductase); PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding region; Oxidoreduc [...]
Dde_1214 protein networkhttps://string-db.org/network/207559.Dde_1214PFAM: Rubrerythrin; KEGG: dvl:Dvul_0832 hypothetical protein.
Dde_1215 protein networkhttps://string-db.org/network/207559.Dde_1215KEGG: aap:NT05HA_1013 HNH nuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
Dde_1216 protein networkhttps://string-db.org/network/207559.Dde_1216KEGG: dsa:Desal_1742 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
Dde_1217 protein networkhttps://string-db.org/network/207559.Dde_1217YibE/F family protein; PFAM: YibE/F-like; KEGG: dsa:Desal_1743 YibE/F family protein.
Dde_1218 protein networkhttps://string-db.org/network/207559.Dde_1218KEGG: dvl:Dvul_2289 ferredoxin-dependent glutamate synthase.
Dde_1222 protein networkhttps://string-db.org/network/207559.Dde_1222PFAM: Rubrerythrin; KEGG: dvm:DvMF_2367 rubrerythrin.
Dde_1225 protein networkhttps://string-db.org/network/207559.Dde_1225Formyltetrahydrofolate dehydrogenase; KEGG: azl:AZL_a06020 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal.
Dde_1226 protein networkhttps://string-db.org/network/207559.Dde_1226Hypothetical protein.
Dde_1227 protein networkhttps://string-db.org/network/207559.Dde_1227Hypothetical protein.
Dde_1228 protein networkhttps://string-db.org/network/207559.Dde_1228KEGG: dvm:DvMF_0712 hypothetical protein.
Dde_1229 protein networkhttps://string-db.org/network/207559.Dde_1229KEGG: dvu:DVU1143 hypothetical protein.
Dde_1230 protein networkhttps://string-db.org/network/207559.Dde_1230PFAM: Bacteriophage CI repressor; KEGG: dal:Dalk_4782 CI repressor.
Dde_1237 protein networkhttps://string-db.org/network/207559.Dde_1237Hypothetical protein.
Dde_1239 protein networkhttps://string-db.org/network/207559.Dde_1239Hypothetical protein.
Dde_1241 protein networkhttps://string-db.org/network/207559.Dde_1241PFAM: Acyltransferase 3; KEGG: tfu:Tfu_1701 hypothetical protein.
Dde_1244 protein networkhttps://string-db.org/network/207559.Dde_1244KEGG: das:Daes_2494 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal.
Dde_1245 protein networkhttps://string-db.org/network/207559.Dde_1245PFAM: Protein of unknown function DUF81; KEGG: das:Daes_2492 hypothetical protein.
Dde_1246 protein networkhttps://string-db.org/network/207559.Dde_1246PFAM: Methyltransferase type 11; KEGG: rpd:RPD_0127 methyltransferase type 12.
Dde_1247 protein networkhttps://string-db.org/network/207559.Dde_1247PFAM: Methicillin resistance protein; KEGG: dvu:DVU2294 femAB family protein.
Dde_1248 protein networkhttps://string-db.org/network/207559.Dde_1248KEGG: dba:Dbac_1597 GreA/GreB family elongation factor.
Dde_1250 protein networkhttps://string-db.org/network/207559.Dde_1250TIGRFAM: Glutamate synthase (NADPH), homotetrameric; KEGG: dvm:DvMF_0938 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide o [...]
Dde_1251 protein networkhttps://string-db.org/network/207559.Dde_1251PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: dvl:Dvul_0767 ferredoxin-NADP(+) reductase subunit alp [...]
Dde_1252 protein networkhttps://string-db.org/network/207559.Dde_1252Citrate transporter; PFAM: Divalent ion symporter; KEGG: mmx:MmarC6_0798 citrate transporter.
Dde_1253 protein networkhttps://string-db.org/network/207559.Dde_1253PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: dsa:Desal_0725 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
Dde_1254 protein networkhttps://string-db.org/network/207559.Dde_1254TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: dma:DMR_34310 L-tartrate dehydratase beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region.
Dde_1255 protein networkhttps://string-db.org/network/207559.Dde_1255Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: dma:DMR_34300 fumarate hydratase; PFAM: Fe-S type hydro-l [...]
Dde_1256 protein networkhttps://string-db.org/network/207559.Dde_1256KEGG: drt:Dret_1067 fumarate reductase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
Dde_1257 protein networkhttps://string-db.org/network/207559.Dde_1257TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: dma:DMR_34280 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprote [...]
Dde_1258 protein networkhttps://string-db.org/network/207559.Dde_1258PFAM: Fumarate reductase respiratory complex; KEGG: dma:DMR_05760 fumarate reductase cytochrome b subunit.
Dde_1260 protein networkhttps://string-db.org/network/207559.Dde_1260Putative two component, sigma54 specific, transcriptional regulator; KEGG: gbm:Gbem_0673 sigma-54-dependent transcriptional response regulator; PFAM: RNA polymerase sigma factor 54, interaction; [...]
Dde_1261 protein networkhttps://string-db.org/network/207559.Dde_1261KEGG: gur:Gura_2707 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Cache, type 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor regi [...]
Dde_1263 protein networkhttps://string-db.org/network/207559.Dde_1263PFAM: DSBA oxidoreductase; KEGG: dsa:Desal_3159 DsbA oxidoreductase.
Dde_1264 protein networkhttps://string-db.org/network/207559.Dde_1264PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: cbf:CLI_2945 sigma-54 dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-tur [...]
Dde_1265 protein networkhttps://string-db.org/network/207559.Dde_1265KEGG: ssm:Spirs_2718 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP.
Dde_1266 protein networkhttps://string-db.org/network/207559.Dde_1266TIGRFAM: Diaminopropionate ammonia-lyase; Diaminopropionate ammonia-lyase, subgroup; KEGG: ctc:CTC00071 diaminopropionate ammonia-lyase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
Dde_1267 protein networkhttps://string-db.org/network/207559.Dde_1267PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: drm:Dred_0260 peptidase.
Dde_1268 protein networkhttps://string-db.org/network/207559.Dde_1268PFAM: Sodium/solute symporter; KEGG: vpr:Vpar_1797 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Dde_1269 protein networkhttps://string-db.org/network/207559.Dde_1269KEGG: drm:Dred_0263 N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 3.
Dde_1270 protein networkhttps://string-db.org/network/207559.Dde_1270PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: dvu:DVU2827 sigm [...]
Dde_1272 protein networkhttps://string-db.org/network/207559.Dde_1272SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Glycyl radical enzyme-activating; KEGG: dvl:Dvul_0490 glycyl-radical activating family protein; PFAM: Radical SAM; 4Fe-4S ferredoxin, iron-sulphur b [...]
Dde_1273 protein networkhttps://string-db.org/network/207559.Dde_1273PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; KEGG: dvu:DVU2824 formate acetyltransferase.
Dde_1274 protein networkhttps://string-db.org/network/207559.Dde_1274KEGG: dvl:Dvul_0492 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripar [...]
Dde_1275 protein networkhttps://string-db.org/network/207559.Dde_1275KEGG: dvl:Dvul_0493 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
Dde_1278 protein networkhttps://string-db.org/network/207559.Dde_1278PFAM: Amidohydrolase 2; KEGG: dvl:Dvul_0495 amidohydrolase 2.
Dde_1279 protein networkhttps://string-db.org/network/207559.Dde_1279KEGG: dsa:Desal_0036 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-4; SMART: Chemotaxis methyl-accepting receptor, signalling; P [...]
Dde_1280 protein networkhttps://string-db.org/network/207559.Dde_1280Hypothetical protein.
Dde_1281 protein networkhttps://string-db.org/network/207559.Dde_1281KEGG: dvl:Dvul_0661 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_1283 protein networkhttps://string-db.org/network/207559.Dde_1283PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dvl:Dvul_0665 TetR family transcriptional regulator.
Dde_1285 protein networkhttps://string-db.org/network/207559.Dde_1285Response regulator receiver protein; KEGG: jan:Jann_2988 histidine kinase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver r [...]
Dde_1286 protein networkhttps://string-db.org/network/207559.Dde_1286Integral membrane sensor hybrid histidine kinase; KEGG: dvu:DVU2580 response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal tran [...]
Dde_1288 protein networkhttps://string-db.org/network/207559.Dde_1288KEGG: dvm:DvMF_1051 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
Dde_1289 protein networkhttps://string-db.org/network/207559.Dde_1289PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_1300 protein networkhttps://string-db.org/network/207559.Dde_1300PFAM: DNA methylase N-4/N-6; KEGG: dvu:DVU1098 adenine specific DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
Dde_1301 protein networkhttps://string-db.org/network/207559.Dde_1301Protein-disulfide reductase; KEGG: dvm:DvMF_3036 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region.
Dde_1302 protein networkhttps://string-db.org/network/207559.Dde_1302KEGG: dvm:DvMF_3042 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
Dde_1303 protein networkhttps://string-db.org/network/207559.Dde_1303Protein of unknown function UPF0153; PFAM: Uncharacterized protein family UPF0153; KEGG: dvl:Dvul_1987 hypothetical protein.
Dde_1304 protein networkhttps://string-db.org/network/207559.Dde_1304CoA-binding domain protein; SMART: CoA-binding; KEGG: dvl:Dvul_1988 CoA-binding domain-containing protein.
Dde_1305 protein networkhttps://string-db.org/network/207559.Dde_1305PFAM: Peptidase M24, structural domain; Creatinase; KEGG: dvu:DVU1000 M24 family peptidase.
Dde_1306 protein networkhttps://string-db.org/network/207559.Dde_1306ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Dde_1307 protein networkhttps://string-db.org/network/207559.Dde_1307KEGG: dvl:Dvul_0929 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like.
hypA protein networkhttps://string-db.org/network/207559.Dde_1308Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
Dde_1309 protein networkhttps://string-db.org/network/207559.Dde_1309KEGG: dvm:DvMF_3167 tetratricopeptide TPR_2 repeat protein.
Dde_1310 protein networkhttps://string-db.org/network/207559.Dde_1310KEGG: dvm:DvMF_3168 hypothetical protein.
Dde_1311 protein networkhttps://string-db.org/network/207559.Dde_1311PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: sfr:Sfri_2815 redoxin domain-containing protein.
Dde_1312 protein networkhttps://string-db.org/network/207559.Dde_1312PFAM: Heavy metal transport/detoxification protein; KEGG: dvm:DvMF_3169 heavy metal transport/detoxification protein.
Dde_1313 protein networkhttps://string-db.org/network/207559.Dde_1313TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; Copper ion-binding; ATPase, P-type, heavy metal translocating; KEGG: dvm:DvMF_3170 heavy [...]
Dde_1314 protein networkhttps://string-db.org/network/207559.Dde_1314KEGG: dvm:DvMF_3171 hypothetical protein.
Dde_1315 protein networkhttps://string-db.org/network/207559.Dde_1315KEGG: dvm:DvMF_3172 UTP--glucose-1-phosphate uridylyltransferase; PFAM: UTP--glucose-1-phosphate uridylyltransferase.
Dde_1317 protein networkhttps://string-db.org/network/207559.Dde_1317Protein of unknown function UPF0029; KEGG: dvl:Dvul_0944 hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0029, Impact; PFAM: Uncharacterized protein family UPF0029, Impact, N-ter [...]
Dde_1318 protein networkhttps://string-db.org/network/207559.Dde_1318SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: dvu:DVU2316 DNA topoisomerase [...]
Dde_1320 protein networkhttps://string-db.org/network/207559.Dde_1320PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: dvm:DvMF_3175 rubrerythrin.
Dde_1322 protein networkhttps://string-db.org/network/207559.Dde_1322Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; HAMP linker domain; KEGG: dvm:DvMF_1060 methyl- [...]
Dde_1323 protein networkhttps://string-db.org/network/207559.Dde_1323PFAM: Carboxylyase-related; KEGG: dvl:Dvul_0938 carboxylyase-like protein; Belongs to the UbiD family.
pgl protein networkhttps://string-db.org/network/207559.Dde_13246-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
Dde_1325 protein networkhttps://string-db.org/network/207559.Dde_1325KEGG: das:Daes_0294 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_1326 protein networkhttps://string-db.org/network/207559.Dde_1326KEGG: das:Daes_0293 ABC transporter-like protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core.
Dde_1327 protein networkhttps://string-db.org/network/207559.Dde_1327ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: das:Daes_0292 binding-protein-dependent transporter inner membra [...]
Dde_1328 protein networkhttps://string-db.org/network/207559.Dde_1328ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: das:Daes_0291 binding-protein-dependent transporter inner membra [...]
Dde_1329 protein networkhttps://string-db.org/network/207559.Dde_1329ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: das:Daes_0290 family 5 extracellular solute-binding protein.
Dde_1331 protein networkhttps://string-db.org/network/207559.Dde_1331Beta-lactamase domain protein; SMART: Beta-lactamase-like; KEGG: dvm:DvMF_3180 beta-lactamase domain protein.
Dde_1333 protein networkhttps://string-db.org/network/207559.Dde_1333KEGG: dba:Dbac_3458 hypothetical protein.
Dde_1334 protein networkhttps://string-db.org/network/207559.Dde_1334PFAM: Acyl-ACP thioesterase; KEGG: dvm:DvMF_1428 acyl-ACP thioesterase.
Dde_1335 protein networkhttps://string-db.org/network/207559.Dde_1335PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dvm:DvMF_2953 protein of unknown function DUF214.
Dde_1336 protein networkhttps://string-db.org/network/207559.Dde_1336PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dvm:DvMF_2954 protein of unknown function DUF214.
Dde_1337 protein networkhttps://string-db.org/network/207559.Dde_1337PFAM: Sodium/solute symporter; KEGG: dsa:Desal_1510 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Dde_1338 protein networkhttps://string-db.org/network/207559.Dde_1338KEGG: dsa:Desal_1511 hypothetical protein.
Dde_1339 protein networkhttps://string-db.org/network/207559.Dde_1339Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2955 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_1340 protein networkhttps://string-db.org/network/207559.Dde_1340KEGG: dvl:Dvul_0795 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_1341 protein networkhttps://string-db.org/network/207559.Dde_1341PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2698 acetyltransferase.
Dde_1342 protein networkhttps://string-db.org/network/207559.Dde_1342KEGG: dvm:DvMF_2957 hypothetical protein.
Dde_1343 protein networkhttps://string-db.org/network/207559.Dde_1343PFAM: Heat shock protein Hsp20; KEGG: dvl:Dvul_0793 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_1344 protein networkhttps://string-db.org/network/207559.Dde_1344PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_2959 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_1345 protein networkhttps://string-db.org/network/207559.Dde_1345KEGG: dvl:Dvul_0801 hypothetical protein.
Dde_1346 protein networkhttps://string-db.org/network/207559.Dde_1346KEGG: dvl:Dvul_1097 hypothetical protein.
Dde_1347 protein networkhttps://string-db.org/network/207559.Dde_1347KEGG: dvl:Dvul_3017 hypothetical protein.
Dde_1349 protein networkhttps://string-db.org/network/207559.Dde_1349KEGG: dvm:DvMF_2966 hypothetical protein.
Dde_1350 protein networkhttps://string-db.org/network/207559.Dde_1350KEGG: dvm:DvMF_2967 RarD protein, DMT superfamily transporter; TIGRFAM: RarD protein; PFAM: Protein of unknown function DUF6, transmembrane.
Dde_1351 protein networkhttps://string-db.org/network/207559.Dde_1351Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fol [...]
Dde_1352 protein networkhttps://string-db.org/network/207559.Dde_1352PFAM: Helix-turn-helix, HxlR type; KEGG: drt:Dret_0703 transcriptional regulator, HxlR family.
Dde_1353 protein networkhttps://string-db.org/network/207559.Dde_1353PFAM: Nitroreductase-like; KEGG: dvl:Dvul_0809 nitroreductase.
Dde_1354 protein networkhttps://string-db.org/network/207559.Dde_1354KEGG: dvm:DvMF_2978 hypothetical protein.
Dde_1355 protein networkhttps://string-db.org/network/207559.Dde_1355KEGG: dvm:DvMF_2980 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
slyX protein networkhttps://string-db.org/network/207559.Dde_1356SlyX family protein; PFAM: SlyX; KEGG: dvm:DvMF_2982 SlyX family protein; Belongs to the SlyX family.
Dde_1357 protein networkhttps://string-db.org/network/207559.Dde_1357PFAM: Uncharacterized protein family UPF0310; KEGG: dba:Dbac_3203 protein of unknown function DUF55.
Dde_1358 protein networkhttps://string-db.org/network/207559.Dde_1358KEGG: dvl:Dvul_0817 hypothetical protein.
Dde_1359 protein networkhttps://string-db.org/network/207559.Dde_1359KEGG: dvm:DvMF_2985 radical SAM domain protein; PFAM: Radical SAM N-terminal; SMART: Elongator protein 3/MiaB/NifB.
Dde_1360 protein networkhttps://string-db.org/network/207559.Dde_1360Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; PAS fold-4; [...]
Dde_1361 protein networkhttps://string-db.org/network/207559.Dde_1361PFAM: Protein of unknown function DUF342; KEGG: das:Daes_0742 hypothetical protein.
Dde_1362 protein networkhttps://string-db.org/network/207559.Dde_1362KEGG: dvl:Dvul_0821 calcium-binding EF-hand-containing protein.
lysS protein networkhttps://string-db.org/network/207559.Dde_1365PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: dvu:DVU2376 lys [...]
Dde_1366 protein networkhttps://string-db.org/network/207559.Dde_1366KEGG: dvm:DvMF_2994 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown funct [...]
lolD protein networkhttps://string-db.org/network/207559.Dde_1367Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmi [...]
bamA protein networkhttps://string-db.org/network/207559.Dde_1368Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer memb [...]
Dde_1370 protein networkhttps://string-db.org/network/207559.Dde_1370Cell wall hydrolase/autolysin; KEGG: dsa:Desal_3576 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
Dde_1371 protein networkhttps://string-db.org/network/207559.Dde_1371PFAM: Outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_0893 outer membrane chaperone Skp (OmpH).
lpxD protein networkhttps://string-db.org/network/207559.Dde_1372UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lip [...]
fabZ protein networkhttps://string-db.org/network/207559.Dde_1373Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...]
lpxA protein networkhttps://string-db.org/network/207559.Dde_1374Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
Dde_1375 protein networkhttps://string-db.org/network/207559.Dde_1375PFAM: Protein of unknown function DUF1009; KEGG: dvm:DvMF_3002 protein of unknown function DUF1009.
Dde_1376 protein networkhttps://string-db.org/network/207559.Dde_1376KEGG: dvm:DvMF_3003 putative transcriptional regulator, GntR family; PFAM: Aminotransferase, class I/II.
Dde_1377 protein networkhttps://string-db.org/network/207559.Dde_1377KEGG: dvm:DvMF_3003 putative transcriptional regulator, GntR family.
thiM protein networkhttps://string-db.org/network/207559.Dde_1378Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
thiE protein networkhttps://string-db.org/network/207559.Dde_1379Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
Dde_1380 protein networkhttps://string-db.org/network/207559.Dde_1380PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dvl:Dvul_1569 hypothetical protein.
Dde_1381 protein networkhttps://string-db.org/network/207559.Dde_1381PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: dvm:DvMF_3009 oxidoreductase FAD/NAD(P)-binding domain protein.
Dde_1382 protein networkhttps://string-db.org/network/207559.Dde_1382KEGG: dvl:Dvul_2024 Glu/Leu/Phe/Val dehydrogenase, C terminal; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Bacterial NAD-glutamate dehydrogenase; SMART: Glutamate/phen [...]
Dde_1384 protein networkhttps://string-db.org/network/207559.Dde_1384KEGG: dvl:Dvul_2023 hypothetical protein.
Dde_1385 protein networkhttps://string-db.org/network/207559.Dde_1385ABC-type transporter, periplasmic subunit family 3; KEGG: dvl:Dvul_2022 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-bin [...]
Dde_1386 protein networkhttps://string-db.org/network/207559.Dde_1386KEGG: dvl:Dvul_2021 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depen [...]
Dde_1387 protein networkhttps://string-db.org/network/207559.Dde_1387Phosphate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_1342 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_1388 protein networkhttps://string-db.org/network/207559.Dde_1388PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dvl:Dvul_2019 lysine exporter protein LysE/YggA.
Dde_1389 protein networkhttps://string-db.org/network/207559.Dde_1389KEGG: dvm:DvMF_1340 hypothetical protein.
Dde_1390 protein networkhttps://string-db.org/network/207559.Dde_1390KEGG: dvu:DVU0971 molybdenum cofactor biosynthesis protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding.
Dde_1391 protein networkhttps://string-db.org/network/207559.Dde_1391Metal dependent phosphohydrolase; KEGG: dvu:DVU0972 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_1392 protein networkhttps://string-db.org/network/207559.Dde_1392KEGG: dvl:Dvul_2015 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
Dde_1393 protein networkhttps://string-db.org/network/207559.Dde_1393KEGG: dvl:Dvul_2014 hypothetical protein.
Dde_1394 protein networkhttps://string-db.org/network/207559.Dde_1394Hypothetical protein.
Dde_1395 protein networkhttps://string-db.org/network/207559.Dde_1395PFAM: Uncharacterized protein family UPF0307; KEGG: dvl:Dvul_2013 hypothetical protein; Belongs to the UPF0307 family.
Dde_1400 protein networkhttps://string-db.org/network/207559.Dde_1400Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: dvu:DVU2357 HD domain-containing protein.
Dde_1401 protein networkhttps://string-db.org/network/207559.Dde_1401Histidinol-phosphate transaminase; KEGG: dvl:Dvul_1935 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II.
Dde_1402 protein networkhttps://string-db.org/network/207559.Dde_1402PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_3016 glycosyl transferase group 1.
Dde_1404 protein networkhttps://string-db.org/network/207559.Dde_1404PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dvu:DVU1062 hypothetical protein.
Dde_1405 protein networkhttps://string-db.org/network/207559.Dde_1405KEGG: dvm:DvMF_3020 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver reg [...]
Dde_1406 protein networkhttps://string-db.org/network/207559.Dde_1406KEGG: dvm:DvMF_3021 aconitate hydratase; TIGRFAM: Aconitase, putative; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small [...]
Dde_1407 protein networkhttps://string-db.org/network/207559.Dde_1407PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: dvm:DvMF_3022 PpiC-type peptidyl-prolyl cis-trans isomerase.
Dde_1408 protein networkhttps://string-db.org/network/207559.Dde_1408Hypothetical protein.
Dde_1409 protein networkhttps://string-db.org/network/207559.Dde_1409Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DN [...]
rplI protein networkhttps://string-db.org/network/207559.Dde_141050S ribosomal protein L9; Binds to the 23S rRNA.
rpsR protein networkhttps://string-db.org/network/207559.Dde_1411Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal p [...]
rpsF protein networkhttps://string-db.org/network/207559.Dde_1412Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
lptD protein networkhttps://string-db.org/network/207559.Dde_1413Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
Dde_1415 protein networkhttps://string-db.org/network/207559.Dde_1415KEGG: dvm:DvMF_1494 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein.
Dde_1416 protein networkhttps://string-db.org/network/207559.Dde_1416TIGRFAM: Type 1 secretion, target domain, C-terminal; KEGG: swp:swp_1383 hemolysin-type calcium-binding region.
Dde_1418 protein networkhttps://string-db.org/network/207559.Dde_1418SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system; KEGG: dvm:DvMF_1160 cyclic nucleotide-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region.
Dde_1419 protein networkhttps://string-db.org/network/207559.Dde_1419KEGG: dvl:Dvul_1976 HlyD family type I secretion membrane fusion protein; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD.
Dde_1420 protein networkhttps://string-db.org/network/207559.Dde_1420PFAM: Transglutaminase-like cysteine peptidase, predicted; KEGG: dvm:DvMF_1158 transglutaminase family protein cysteine peptidase BTLCP.
Dde_1421 protein networkhttps://string-db.org/network/207559.Dde_1421Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: PAS fold; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dvm:DvMF_1157 putative PAS/PAC sensor protein; SMART: PAS.
trmFO protein networkhttps://string-db.org/network/207559.Dde_1422Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG famil [...]
Dde_1423 protein networkhttps://string-db.org/network/207559.Dde_1423ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: dvm:DvMF_3146 extracellular solute-binding protein family 3.
Dde_1424 protein networkhttps://string-db.org/network/207559.Dde_1424TIGRFAM: Alpha-glucan phosphorylase; KEGG: dvm:DvMF_3147 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35.
Dde_1425 protein networkhttps://string-db.org/network/207559.Dde_1425Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the int [...]
argD protein networkhttps://string-db.org/network/207559.Dde_1426TIGRFAM: Acetylornithine/succinylornithine aminotransferase; KEGG: dvu:DVU2347 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dep [...]
Dde_1427 protein networkhttps://string-db.org/network/207559.Dde_1427KEGG: dvm:DvMF_3150 hypothetical protein.
Dde_1428 protein networkhttps://string-db.org/network/207559.Dde_1428Phosphate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvl:Dvul_0916 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_1429 protein networkhttps://string-db.org/network/207559.Dde_1429ABC-type transporter, periplasmic subunit family 3; KEGG: dvm:DvMF_3152 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular s [...]
Dde_1430 protein networkhttps://string-db.org/network/207559.Dde_1430KEGG: dvm:DvMF_3153 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
Dde_1431 protein networkhttps://string-db.org/network/207559.Dde_1431KEGG: dvl:Dvul_0919 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
prmA protein networkhttps://string-db.org/network/207559.Dde_1432Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
Dde_1433 protein networkhttps://string-db.org/network/207559.Dde_1433PFAM: Glycosyl transferase, family 9; KEGG: dvm:DvMF_3035 glycosyl transferase family 9.
Dde_1435 protein networkhttps://string-db.org/network/207559.Dde_1435KEGG: dvm:DvMF_3156 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1.
Dde_1436 protein networkhttps://string-db.org/network/207559.Dde_1436PFAM: Peptidase M23; KEGG: dvl:Dvul_0922 peptidase M23B.
Dde_1437 protein networkhttps://string-db.org/network/207559.Dde_1437TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: dvl:Dvul_0923 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A [...]
Dde_1438 protein networkhttps://string-db.org/network/207559.Dde_1438PFAM: Protein of unknown function DUF610, YibQ; KEGG: dvu:DVU2335 hypothetical protein.
ndk protein networkhttps://string-db.org/network/207559.Dde_1439Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...]
proC protein networkhttps://string-db.org/network/207559.Dde_1440Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
Dde_1441 protein networkhttps://string-db.org/network/207559.Dde_1441PFAM: Smr protein/MutS2 C-terminal; KEGG: dvm:DvMF_3162 Smr protein/MutS2.
Dde_1442 protein networkhttps://string-db.org/network/207559.Dde_1442KEGG: dvm:DvMF_3163 signal peptide peptidase SppA, 36K type; TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49.
Dde_1443 protein networkhttps://string-db.org/network/207559.Dde_1443PFAM: Protein of unknown function DUF457, transmembrane; KEGG: dba:Dbac_1809 hypothetical protein.
Dde_1444 protein networkhttps://string-db.org/network/207559.Dde_1444SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: dvm:DvMF_0915 SufBD protein.
Dde_1445 protein networkhttps://string-db.org/network/207559.Dde_1445KEGG: dvl:Dvul_1972 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_1446 protein networkhttps://string-db.org/network/207559.Dde_1446Rhomboid family protein; PFAM: Peptidase S54, rhomboid; KEGG: dvm:DvMF_0913 rhomboid family protein.
coaE protein networkhttps://string-db.org/network/207559.Dde_1447Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
upp protein networkhttps://string-db.org/network/207559.Dde_1448Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
Dde_1449 protein networkhttps://string-db.org/network/207559.Dde_1449KEGG: dvl:Dvul_1967 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease.
Dde_1450 protein networkhttps://string-db.org/network/207559.Dde_1450Hypothetical protein.
cmk protein networkhttps://string-db.org/network/207559.Dde_1452TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: dvm:DvMF_0909 cytidylate kinase; PFAM: Cytidylate kinase region.
hisC protein networkhttps://string-db.org/network/207559.Dde_1453TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: dvl:Dvul_1964 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Belongs to the class-II pyridoxal-phosphate-dependen [...]
Dde_1454 protein networkhttps://string-db.org/network/207559.Dde_1454PFAM: UspA; KEGG: dvl:Dvul_1963 UspA domain-containing protein.
Dde_1455 protein networkhttps://string-db.org/network/207559.Dde_1455KEGG: dvl:Dvul_1962 hypothetical protein.
Dde_1457 protein networkhttps://string-db.org/network/207559.Dde_1457PFAM: Methyltransferase type 11; KEGG: cag:Cagg_2103 methyltransferase type 11.
Dde_1458 protein networkhttps://string-db.org/network/207559.Dde_1458KEGG: dba:Dbac_2477 CinA domain protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; Belongs to the CinA family.
Dde_1459 protein networkhttps://string-db.org/network/207559.Dde_1459ABC-type transporter, periplasmic subunit family 3; KEGG: dbr:Deba_0247 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; Cytidine/deoxycytidyla [...]
Dde_1460 protein networkhttps://string-db.org/network/207559.Dde_1460PFAM: Type IV pilus assembly PilZ; KEGG: dma:DMR_18170 hypothetical protein.
Dde_1461 protein networkhttps://string-db.org/network/207559.Dde_1461Glucokinase; KEGG: das:Daes_1428 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
Dde_1462 protein networkhttps://string-db.org/network/207559.Dde_1462PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_3002 hypothetical protein.
Dde_1463 protein networkhttps://string-db.org/network/207559.Dde_1463Dihydrolipoyl dehydrogenase; KEGG: dsa:Desal_2458 pyridine nucleotide-disulfide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucl [...]
Dde_1464 protein networkhttps://string-db.org/network/207559.Dde_1464KEGG: nhl:Nhal_2875 hypothetical protein.
hisA protein networkhttps://string-db.org/network/207559.Dde_14651-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ri [...]
Dde_1466 protein networkhttps://string-db.org/network/207559.Dde_1466KEGG: dvm:DvMF_3121 putative lipoprotein.
hisB protein networkhttps://string-db.org/network/207559.Dde_1467KEGG: dvl:Dvul_1953 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.
tatC protein networkhttps://string-db.org/network/207559.Dde_1468Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in t [...]
tatB protein networkhttps://string-db.org/network/207559.Dde_1469Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in t [...]
guaA protein networkhttps://string-db.org/network/207559.Dde_1470GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
guaB protein networkhttps://string-db.org/network/207559.Dde_1471Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
Dde_1473 protein networkhttps://string-db.org/network/207559.Dde_1473KEGG: dvm:DvMF_3127 tetratricopeptide TPR_2 repeat protein.
Dde_1474 protein networkhttps://string-db.org/network/207559.Dde_1474PFAM: Cytochrome c assembly protein; KEGG: dvm:DvMF_3129 cytochrome c assembly protein.
Dde_1475 protein networkhttps://string-db.org/network/207559.Dde_1475PFAM: Cytochrome c-type biogenesis protein CcmB; KEGG: dvm:DvMF_3130 cytochrome c-type biogenesis protein CcmB.
Dde_1476 protein networkhttps://string-db.org/network/207559.Dde_1476Heme-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvl:Dvul_1944 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_1477 protein networkhttps://string-db.org/network/207559.Dde_1477PFAM: Cytochrome c assembly protein; KEGG: dvm:DvMF_3132 cytochrome c assembly protein.
Dde_1478 protein networkhttps://string-db.org/network/207559.Dde_1478Cytochrome c biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a pro [...]
Dde_1479 protein networkhttps://string-db.org/network/207559.Dde_1479PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: dvl:Dvul_1941 hypothetical protein.
Dde_1481 protein networkhttps://string-db.org/network/207559.Dde_1481TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; Histidinol-phosphate phosphatase; KEGG: dvu:DVU1054 HAD superfamily hydrolase.
Dde_1482 protein networkhttps://string-db.org/network/207559.Dde_1482PFAM: Glycosyl transferase, family 9; KEGG: dvu:DVU1055 heptosyltransferase family protein.
Dde_1483 protein networkhttps://string-db.org/network/207559.Dde_1483KEGG: dvm:DvMF_3140 citrate transporter.
trmH protein networkhttps://string-db.org/network/207559.Dde_1484tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransf [...]
Dde_1485 protein networkhttps://string-db.org/network/207559.Dde_1485PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_3142 glycosyl transferase family 2.
Dde_1486 protein networkhttps://string-db.org/network/207559.Dde_1486PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_3143 glycosyl transferase family 2.
Dde_1487 protein networkhttps://string-db.org/network/207559.Dde_1487PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_3144 glycosyl transferase family 2.
Dde_1488 protein networkhttps://string-db.org/network/207559.Dde_1488rRNA (guanine-N(2)-)-methyltransferase; KEGG: dsa:Desal_1779 RNA methylase; PFAM: Putative RNA methylase; Belongs to the methyltransferase superfamily.
Dde_1489 protein networkhttps://string-db.org/network/207559.Dde_1489KEGG: dvl:Dvul_2001 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase.
Dde_1490 protein networkhttps://string-db.org/network/207559.Dde_1490PFAM: Divalent ion tolerance protein, CutA1; KEGG: dvm:DvMF_2936 CutA1 divalent ion tolerance protein.
nth protein networkhttps://string-db.org/network/207559.Dde_1491Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...]
Dde_1492 protein networkhttps://string-db.org/network/207559.Dde_1492KEGG: dvl:Dvul_1998 hypothetical protein.
Dde_1493 protein networkhttps://string-db.org/network/207559.Dde_1493KEGG: dvm:DvMF_2939 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: Signal transduction response regul [...]
Dde_1494 protein networkhttps://string-db.org/network/207559.Dde_1494KEGG: fbl:Fbal_2105 chloramphenicol acetyltransferase.
Dde_1495 protein networkhttps://string-db.org/network/207559.Dde_1495KEGG: dvm:DvMF_1913 hypothetical protein.
metK protein networkhttps://string-db.org/network/207559.Dde_1496S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...]
Dde_1497 protein networkhttps://string-db.org/network/207559.Dde_1497PFAM: Protein of unknown function DUF502; KEGG: hna:Hneap_0474 protein of unknown function DUF502.
panC protein networkhttps://string-db.org/network/207559.Dde_1498Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase fa [...]
Dde_1499 protein networkhttps://string-db.org/network/207559.Dde_1499KEGG: dvm:DvMF_2943 hypothetical protein.
panB protein networkhttps://string-db.org/network/207559.Dde_15003-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to [...]
Dde_1501 protein networkhttps://string-db.org/network/207559.Dde_1501Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
Dde_1502 protein networkhttps://string-db.org/network/207559.Dde_1502Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
Dde_1503 protein networkhttps://string-db.org/network/207559.Dde_1503PFAM: Uncharacterized conserved protein UCP020606; KEGG: dvl:Dvul_0791 hypothetical protein.
Dde_1504 protein networkhttps://string-db.org/network/207559.Dde_1504KEGG: dvl:Dvul_0799 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
gpt protein networkhttps://string-db.org/network/207559.Dde_1506Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
Dde_1507 protein networkhttps://string-db.org/network/207559.Dde_1507PFAM: Basic membrane lipoprotein; KEGG: dvl:Dvul_1927 basic membrane lipoprotein.
Dde_1508 protein networkhttps://string-db.org/network/207559.Dde_1508ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dvl:Dvul_1926 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_1509 protein networkhttps://string-db.org/network/207559.Dde_1509ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dvm:DvMF_3028 inner-membrane translocator; Belongs to the binding-protein-dependent transport s [...]
Dde_1510 protein networkhttps://string-db.org/network/207559.Dde_1510Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_3029 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_1511 protein networkhttps://string-db.org/network/207559.Dde_1511KEGG: dol:Dole_0974 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC [...]
Dde_1512 protein networkhttps://string-db.org/network/207559.Dde_1512TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: das:Daes_2834 regulatory protein, FmdB family; SMART: Regulatory protein, FmdB, putative.
ftsH protein networkhttps://string-db.org/network/207559.Dde_1513ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
Dde_1514 protein networkhttps://string-db.org/network/207559.Dde_1514Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
dacA protein networkhttps://string-db.org/network/207559.Dde_1515Conserved hypothetical protein CHP00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteri [...]
Dde_1516 protein networkhttps://string-db.org/network/207559.Dde_1516YbbR family protein; PFAM: YbbR-like; KEGG: dvm:DvMF_0058 YbbR family protein.
glmM protein networkhttps://string-db.org/network/207559.Dde_1517Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
Dde_1518 protein networkhttps://string-db.org/network/207559.Dde_1518TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: dvl:Dvul_1782 UTP-glucose-1-phosphate uridylyltransferase GalU; PFAM: Nucleotidyl transferase.
priA protein networkhttps://string-db.org/network/207559.Dde_1519Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
Dde_1520 protein networkhttps://string-db.org/network/207559.Dde_1520KEGG: dvm:DvMF_0062 hypothetical protein.
Dde_1521 protein networkhttps://string-db.org/network/207559.Dde_1521KEGG: dvl:Dvul_1780 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_1522 protein networkhttps://string-db.org/network/207559.Dde_1522KEGG: dvm:DvMF_0064 histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisatio [...]
Dde_1524 protein networkhttps://string-db.org/network/207559.Dde_1524PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
trmL protein networkhttps://string-db.org/network/207559.Dde_1528tRNA/rRNA methyltransferase (SpoU); Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transf [...]
cobD protein networkhttps://string-db.org/network/207559.Dde_1529Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
Dde_1530 protein networkhttps://string-db.org/network/207559.Dde_1530HI0933 family protein; KEGG: dvu:DVU2234 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein.
Dde_1531 protein networkhttps://string-db.org/network/207559.Dde_1531PFAM: Alpha/beta hydrolase fold-1; KEGG: dvm:DvMF_0829 alpha/beta hydrolase fold protein.
Dde_1532 protein networkhttps://string-db.org/network/207559.Dde_1532KEGG: dvm:DvMF_0828 hypothetical protein.
Dde_1533 protein networkhttps://string-db.org/network/207559.Dde_1533KEGG: dvl:Dvul_1010 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, d [...]
Dde_1534 protein networkhttps://string-db.org/network/207559.Dde_1534PFAM: Protein of unknown function DUF342; KEGG: dsa:Desal_0248 hypothetical protein.
Dde_1536 protein networkhttps://string-db.org/network/207559.Dde_1536Hypothetical protein.
Dde_1537 protein networkhttps://string-db.org/network/207559.Dde_1537Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molec [...]
Dde_1538 protein networkhttps://string-db.org/network/207559.Dde_1538PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_1012 MotA/TolQ/ExbB proton channel.
Dde_1539 protein networkhttps://string-db.org/network/207559.Dde_1539PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dvm:DvMF_0819 OmpA/MotB domain protein.
Dde_1540 protein networkhttps://string-db.org/network/207559.Dde_1540PFAM: Type IV pilus assembly PilZ; KEGG: dvl:Dvul_1014 type IV pilus assembly PilZ.
Dde_1541 protein networkhttps://string-db.org/network/207559.Dde_1541KEGG: dvm:DvMF_0817 biotin carboxylase; PFAM: Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal.
Dde_1542 protein networkhttps://string-db.org/network/207559.Dde_1542KEGG: dvm:DvMF_0816 acetyl-CoA carboxylase; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region.
Dde_1543 protein networkhttps://string-db.org/network/207559.Dde_1543KEGG: dvm:DvMF_0815 hypothetical protein.
Dde_1544 protein networkhttps://string-db.org/network/207559.Dde_1544KEGG: dvm:DvMF_0814 hypothetical protein.
Dde_1545 protein networkhttps://string-db.org/network/207559.Dde_1545KEGG: dvm:DvMF_0813 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding.
Dde_1546 protein networkhttps://string-db.org/network/207559.Dde_1546Transcriptional regulator, IclR family; KEGG: bpa:BPP4398 transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcrip [...]
Dde_1547 protein networkhttps://string-db.org/network/207559.Dde_1547Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
Dde_1548 protein networkhttps://string-db.org/network/207559.Dde_1548TRAP dicarboxylate transporter, DctP subunit; KEGG: ant:Arnit_0951 family 7 extracellular solute-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute [...]
Dde_1549 protein networkhttps://string-db.org/network/207559.Dde_1549PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ant:Arnit_0952 tripartite ATP-independent periplasmic transporter subunit DctQ.
Dde_1550 protein networkhttps://string-db.org/network/207559.Dde_1550KEGG: ant:Arnit_0953 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
ddpX protein networkhttps://string-db.org/network/207559.Dde_1551Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
Dde_1552 protein networkhttps://string-db.org/network/207559.Dde_1552PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold-4; Amino acid-binding ACT; Helix-turn-helix, Fis-ty [...]
Dde_1553 protein networkhttps://string-db.org/network/207559.Dde_1553TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: dvu:DVU0571 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; B [...]
Dde_1554 protein networkhttps://string-db.org/network/207559.Dde_1554KEGG: dvm:DvMF_0801 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS.
thiG protein networkhttps://string-db.org/network/207559.Dde_1555Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarbo [...]
Dde_1556 protein networkhttps://string-db.org/network/207559.Dde_1556KEGG: dsa:Desal_2649 thiamine biosynthesis protein ThiH; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM.
Dde_1557 protein networkhttps://string-db.org/network/207559.Dde_1557PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: dvm:DvMF_0798 thiamine biosynthesis protein ThiF.
thiE-2 protein networkhttps://string-db.org/network/207559.Dde_1558Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
Dde_1559 protein networkhttps://string-db.org/network/207559.Dde_1559KEGG: rhi:NGR_c27290 hypothetical protein.
Dde_1560 protein networkhttps://string-db.org/network/207559.Dde_1560Regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; KEGG: rle:RL3156 MarR family transcriptional regulatory protein.
Dde_1561 protein networkhttps://string-db.org/network/207559.Dde_1561Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: das:Daes_0017 regulatory protein TetR.
Dde_1562 protein networkhttps://string-db.org/network/207559.Dde_1562TIGRFAM: Secretion protein HlyD; KEGG: dsa:Desal_3803 efflux transporter RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_1563 protein networkhttps://string-db.org/network/207559.Dde_1563PFAM: Acriflavin resistance protein; KEGG: dsa:Desal_3804 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Dde_1564 protein networkhttps://string-db.org/network/207559.Dde_1564SNF2-related protein; KEGG: dvm:DvMF_0789 non-specific serine/threonine protein kinase; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; Zinc finger, SWIM-type; SMART: DEAD-like helicase, N-term [...]
Dde_1565 protein networkhttps://string-db.org/network/207559.Dde_1565ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dvm:DvMF_0788 extracellular solute-binding protein family 5.
Dde_1566 protein networkhttps://string-db.org/network/207559.Dde_1566KEGG: dvu:DVU2006 hypothetical protein.
Dde_1567 protein networkhttps://string-db.org/network/207559.Dde_1567KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_1568 protein networkhttps://string-db.org/network/207559.Dde_1568ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dvm:DvMF_0788 extracellular solute-binding protein family 5.
Dde_1569 protein networkhttps://string-db.org/network/207559.Dde_1569(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in respo [...]
Dde_1570 protein networkhttps://string-db.org/network/207559.Dde_1570Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
cheB1 protein networkhttps://string-db.org/network/207559.Dde_1571Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Cataly [...]
Dde_1572 protein networkhttps://string-db.org/network/207559.Dde_1572KEGG: dvm:DvMF_0779 PBS lyase heat domain protein repeat-containing protein.
Dde_1573 protein networkhttps://string-db.org/network/207559.Dde_1573MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
Dde_1574 protein networkhttps://string-db.org/network/207559.Dde_1574PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dvl:Dvul_1153 cobyrinic acid a,c-diamide synthase.
Dde_1575 protein networkhttps://string-db.org/network/207559.Dde_1575KEGG: dvl:Dvul_1154 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
Dde_1576 protein networkhttps://string-db.org/network/207559.Dde_1576KEGG: dvl:Dvul_1155 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_1577 protein networkhttps://string-db.org/network/207559.Dde_1577KEGG: dvm:DvMF_0774 CheA signal transduction histidine kinase; PFAM: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal [...]
Dde_1579 protein networkhttps://string-db.org/network/207559.Dde_1579KEGG: dvu:DVU2071 hypothetical protein.
cpoB protein networkhttps://string-db.org/network/207559.Dde_1580Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
Dde_1581 protein networkhttps://string-db.org/network/207559.Dde_1581KEGG: das:Daes_1865 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A.
Dde_1582 protein networkhttps://string-db.org/network/207559.Dde_1582KEGG: dvm:DvMF_0770 hypothetical protein.
Dde_1583 protein networkhttps://string-db.org/network/207559.Dde_1583Putative signal transduction protein; KEGG: dvm:DvMF_0769 metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD.
Dde_1584 protein networkhttps://string-db.org/network/207559.Dde_1584KEGG: das:Daes_1862 diguanylate cyclase; PFAM: Signal transduction response regulator, receiver region; Diguanylate cyclase, predicted; SMART: Signal transduction response regulator, receiver reg [...]
xerC protein networkhttps://string-db.org/network/207559.Dde_1585Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert d [...]
Dde_1586 protein networkhttps://string-db.org/network/207559.Dde_1586PFAM: 2-nitropropane dioxygenase, NPD; KEGG: dvm:DvMF_0766 2-nitropropane dioxygenase NPD.
Dde_1587 protein networkhttps://string-db.org/network/207559.Dde_1587KEGG: dvl:Dvul_1165 hypothetical protein.
Dde_1588 protein networkhttps://string-db.org/network/207559.Dde_1588PFAM: DNA helicase, UvrD/REP type; KEGG: dvm:DvMF_0764 UvrD/REP helicase.
pfkA protein networkhttps://string-db.org/network/207559.Dde_15896-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase typ [...]
Dde_1590 protein networkhttps://string-db.org/network/207559.Dde_1590PFAM: Glycosyl transferase, family 2; KEGG: dvl:Dvul_1168 glycosyl transferase family protein.
Dde_1591 protein networkhttps://string-db.org/network/207559.Dde_1591KEGG: dvl:Dvul_1169 metal dependent phosphohydrolase; TIGRFAM: HDIG; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_1593 protein networkhttps://string-db.org/network/207559.Dde_1593PSP1 domain protein; PFAM: PSP1, C-terminal; KEGG: dvl:Dvul_1170 PSP1 domain-containing protein.
metG protein networkhttps://string-db.org/network/207559.Dde_1594Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
Dde_1595 protein networkhttps://string-db.org/network/207559.Dde_1595PFAM: SNARE associated Golgi protein; KEGG: dvu:DVU2053 hypothetical protein.
Dde_1596 protein networkhttps://string-db.org/network/207559.Dde_1596PFAM: Glycosyl transferase, family 2; KEGG: dvl:Dvul_1174 glycosyl transferase family protein.
Dde_1598 protein networkhttps://string-db.org/network/207559.Dde_1598GTP-binding protein HSR1-related protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC [...]
Dde_1599 protein networkhttps://string-db.org/network/207559.Dde_1599FeoA family protein; KEGG: tko:TK0715 iron(II) transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit.
Dde_1600 protein networkhttps://string-db.org/network/207559.Dde_1600PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dbr:Deba_1127 TonB-dependent receptor.
Dde_1601 protein networkhttps://string-db.org/network/207559.Dde_1601Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; KEGG: cts:Ctha_0998 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_1602 protein networkhttps://string-db.org/network/207559.Dde_1602Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: gvi:gll0322 HlyB/MsbA family ABC transporter; SMART: ATPase, AAA+ type, core.
Dde_1603 protein networkhttps://string-db.org/network/207559.Dde_1603KEGG: cce:Ccel_3258 hypothetical protein.
Dde_1604 protein networkhttps://string-db.org/network/207559.Dde_1604PFAM: 4'-phosphopantetheinyl transferase; KEGG: msl:Msil_3806 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
Dde_1605 protein networkhttps://string-db.org/network/207559.Dde_1605KEGG: cyh:Cyan8802_3104 oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase.
Dde_1606 protein networkhttps://string-db.org/network/207559.Dde_1606KEGG: dvu:DVU2006 hypothetical protein.
Dde_1607 protein networkhttps://string-db.org/network/207559.Dde_1607KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_1608 protein networkhttps://string-db.org/network/207559.Dde_1608TIGRFAM: Amino acid adenylation; KEGG: ant:Arnit_2213 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, C-terminal; Condensation dom [...]
Dde_1609 protein networkhttps://string-db.org/network/207559.Dde_1609Amino acid adenylation domain protein; SMART: Polyketide synthase, beta-ketoacyl synthase region; TIGRFAM: Amino acid adenylation; KEGG: dae:Dtox_2675 amino acid adenylation domain-containing pro [...]
Dde_1611 protein networkhttps://string-db.org/network/207559.Dde_1611KEGG: gvi:gll0324 AraC family transcription regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain.
Dde_1612 protein networkhttps://string-db.org/network/207559.Dde_1612KEGG: dvu:DVU2801 hypothetical protein.
Dde_1614 protein networkhttps://string-db.org/network/207559.Dde_1614KEGG: dvl:Dvul_0512 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR.
Dde_1615 protein networkhttps://string-db.org/network/207559.Dde_1615KEGG: dvl:Dvul_0510 amino acid transporter, AAT family.
Dde_1616 protein networkhttps://string-db.org/network/207559.Dde_1616KEGG: dvl:Dvul_0509 metallo-beta-lactamase family protein.
Dde_1617 protein networkhttps://string-db.org/network/207559.Dde_1617PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; KEGG: dvu:DVU2805 P47K family cobalamin synthesis protein.
Dde_1618 protein networkhttps://string-db.org/network/207559.Dde_1618NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold; KEGG: dvu:DVU3135 flavodoxin-like fold domain-containing protein.
Dde_1619 protein networkhttps://string-db.org/network/207559.Dde_1619PFAM: Protein of unknown function DUF1566; KEGG: dba:Dbac_0168 protein of unknown function DUF1566.
Dde_1620 protein networkhttps://string-db.org/network/207559.Dde_1620PFAM: Peptidase C26; KEGG: aeh:Mlg_2749 peptidase C26.
Dde_1621 protein networkhttps://string-db.org/network/207559.Dde_1621KEGG: tgr:Tgr7_3160 hypothetical protein.
Dde_1622 protein networkhttps://string-db.org/network/207559.Dde_1622ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: das:Daes_0890 periplasmic-binding protein.
Dde_1623 protein networkhttps://string-db.org/network/207559.Dde_1623ABC-type transporter, integral membrane subunit; PFAM: Bacterial transport system permease protein; KEGG: das:Daes_0889 transporter permease; Belongs to the binding-protein-dependent transport sy [...]
Dde_1624 protein networkhttps://string-db.org/network/207559.Dde_1624Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: das:Daes_0888 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_1625 protein networkhttps://string-db.org/network/207559.Dde_1625PFAM: Formylmethanofuran dehydrogenase, subunit E region; KEGG: das:Daes_0887 formylmethanofuran dehydrogenase subunit E domain-containing protein.
Dde_1627 protein networkhttps://string-db.org/network/207559.Dde_1627KEGG: dvm:DvMF_0621 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_1628 protein networkhttps://string-db.org/network/207559.Dde_1628Diguanylate cyclase/phosphodiesterase with CBS domains; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyc [...]
Dde_1629 protein networkhttps://string-db.org/network/207559.Dde_1629PFAM: Glycosyl transferase, family 9; KEGG: dvu:DVU1956 heptosyltransferase family protein.
Dde_1630 protein networkhttps://string-db.org/network/207559.Dde_1630PFAM: Tetratricopeptide TPR-1; KEGG: dvm:DvMF_0614 tetratricopeptide domain protein.
Dde_1631 protein networkhttps://string-db.org/network/207559.Dde_1631TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold; KEGG: das:Daes_1286 diguanylate cyclase; SMA [...]
nadD protein networkhttps://string-db.org/network/207559.Dde_1632Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
proA protein networkhttps://string-db.org/network/207559.Dde_1633Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclizat [...]
Dde_1634 protein networkhttps://string-db.org/network/207559.Dde_1634KEGG: dvm:DvMF_0611 hypothetical protein.
Dde_1635 protein networkhttps://string-db.org/network/207559.Dde_1635KEGG: dvl:Dvul_1219 NifA family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF.
Dde_1636 protein networkhttps://string-db.org/network/207559.Dde_1636KEGG: dvl:Dvul_1220 hypothetical protein.
Dde_1637 protein networkhttps://string-db.org/network/207559.Dde_16372-oxoglutarate synthase; KEGG: dvl:Dvul_1221 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
Dde_1638 protein networkhttps://string-db.org/network/207559.Dde_1638KEGG: dvl:Dvul_1222 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
Dde_1639 protein networkhttps://string-db.org/network/207559.Dde_1639KEGG: dvm:DvMF_0603 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal.
Dde_1641 protein networkhttps://string-db.org/network/207559.Dde_1641Gamma-glutamyltransferase; KEGG: atm:ANT_05220 putative gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase.
Dde_1642 protein networkhttps://string-db.org/network/207559.Dde_1642KEGG: dvl:Dvul_1225 hypothetical protein.
Dde_1643 protein networkhttps://string-db.org/network/207559.Dde_1643KEGG: drt:Dret_0552 hypothetical protein.
Dde_1644 protein networkhttps://string-db.org/network/207559.Dde_1644KEGG: dvm:DvMF_0600 DegV family protein; TIGRFAM: DegV; PFAM: Dak phosphatase; DegV.
Dde_1646 protein networkhttps://string-db.org/network/207559.Dde_1646KEGG: dvm:DvMF_0594 intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI.
Dde_1647 protein networkhttps://string-db.org/network/207559.Dde_1647PFAM: Major facilitator superfamily MFS-1; KEGG: dvm:DvMF_0592 major facilitator superfamily MFS_1.
Dde_1648 protein networkhttps://string-db.org/network/207559.Dde_1648PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_1650 protein networkhttps://string-db.org/network/207559.Dde_1650Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; HAMP linker domain; KEGG: dvu:DVU1884 methyl-ac [...]
ybeY protein networkhttps://string-db.org/network/207559.Dde_1651Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
Dde_1652 protein networkhttps://string-db.org/network/207559.Dde_1652TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Metal-dependent phosphohydrolase, 7TM intracellular region; KEGG: dvm:DvMF_0576 metal dependent phosphohydrolase; SMAR [...]
Dde_1653 protein networkhttps://string-db.org/network/207559.Dde_1653PFAM: PhoH-like protein; KEGG: dvm:DvMF_0575 PhoH family protein.
Dde_1654 protein networkhttps://string-db.org/network/207559.Dde_1654KEGG: dvm:DvMF_0574 hypothetical protein.
Dde_1656 protein networkhttps://string-db.org/network/207559.Dde_1656PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_0573 glycosyl transferase group 1.
Dde_1657 protein networkhttps://string-db.org/network/207559.Dde_1657KEGG: dvm:DvMF_0572 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase.
Dde_1658 protein networkhttps://string-db.org/network/207559.Dde_1658PFAM: Polysaccharide deacetylase; KEGG: dvm:DvMF_0570 polysaccharide deacetylase.
Dde_1659 protein networkhttps://string-db.org/network/207559.Dde_1659KEGG: dvm:DvMF_0569 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
Dde_1660 protein networkhttps://string-db.org/network/207559.Dde_1660KEGG: dvm:DvMF_0568 hypothetical protein.
clpB protein networkhttps://string-db.org/network/207559.Dde_1661ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belong [...]
Dde_1662 protein networkhttps://string-db.org/network/207559.Dde_1662Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PP [...]
Dde_1663 protein networkhttps://string-db.org/network/207559.Dde_1663KEGG: dvu:DVU1871 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal.
Dde_1664 protein networkhttps://string-db.org/network/207559.Dde_1664Cyclase family protein; PFAM: Putative cyclase; KEGG: dvm:DvMF_0564 cyclase family protein.
Dde_1665 protein networkhttps://string-db.org/network/207559.Dde_1665Methyl-accepting chemotaxis sensory transducer with Cache sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; HAMP linker domain; Cache; KEGG: dvm:DvMF_0563 me [...]
Dde_1667 protein networkhttps://string-db.org/network/207559.Dde_1667PFAM: Tetratricopeptide TPR-1; KEGG: dvm:DvMF_2326 TPR repeat-containing protein.
Dde_1668 protein networkhttps://string-db.org/network/207559.Dde_1668Hpt domain protein; KEGG: cli:Clim_2078 multi-sensor hybrid histidine kinase; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase [...]
Dde_1669 protein networkhttps://string-db.org/network/207559.Dde_1669ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a varie [...]
Dde_1670 protein networkhttps://string-db.org/network/207559.Dde_1670KEGG: drt:Dret_0731 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_1671 protein networkhttps://string-db.org/network/207559.Dde_1671Hypothetical protein.
purM protein networkhttps://string-db.org/network/207559.Dde_1672TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: dvl:Dvul_1668 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein.
Dde_1673 protein networkhttps://string-db.org/network/207559.Dde_1673PFAM: Integrase, catalytic core; KEGG: swd:Swoo_3827 hypothetical protein.
Dde_1676 protein networkhttps://string-db.org/network/207559.Dde_1676KEGG: dvu:DVU1407 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_1677 protein networkhttps://string-db.org/network/207559.Dde_1677KEGG: dvm:DvMF_0204 hypothetical protein.
Dde_1678 protein networkhttps://string-db.org/network/207559.Dde_1678KEGG: dvl:Dvul_1665 hypothetical protein.
Dde_1679 protein networkhttps://string-db.org/network/207559.Dde_1679KEGG: dvl:Dvul_1664 hypothetical protein.
Dde_1680 protein networkhttps://string-db.org/network/207559.Dde_1680KEGG: dvl:Dvul_1663 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC.
Dde_1681 protein networkhttps://string-db.org/network/207559.Dde_1681Phosphoglycerate dehydrogenase; KEGG: dvl:Dvul_1662 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific [...]
Dde_1682 protein networkhttps://string-db.org/network/207559.Dde_1682AsmA family protein; PFAM: AsmA; KEGG: dvm:DvMF_0212 hypothetical protein.
Dde_1684 protein networkhttps://string-db.org/network/207559.Dde_1684Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: dvm:DvMF_0213 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal tra [...]
Dde_1685 protein networkhttps://string-db.org/network/207559.Dde_1685Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: dvl:Dvul_1657 Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transdu [...]
Dde_1686 protein networkhttps://string-db.org/network/207559.Dde_1686Hpt domain protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dvm:DvMF_0217 Hpt protein.
Dde_1687 protein networkhttps://string-db.org/network/207559.Dde_1687KEGG: dvm:DvMF_0218 hypothetical protein.
Dde_1688 protein networkhttps://string-db.org/network/207559.Dde_1688KEGG: dvm:DvMF_0220 hypothetical protein.
Dde_1689 protein networkhttps://string-db.org/network/207559.Dde_1689KEGG: dvl:Dvul_1654 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SMART: von Willebrand factor, type A.
Dde_1690 protein networkhttps://string-db.org/network/207559.Dde_1690Dihydrolipoyl dehydrogenase; KEGG: dvl:Dvul_1653 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide- [...]
Dde_1691 protein networkhttps://string-db.org/network/207559.Dde_1691PFAM: Glycine cleavage system P-protein, N-terminal; KEGG: dvm:DvMF_0223 glycine dehydrogenase subunit 2.
gcvPA protein networkhttps://string-db.org/network/207559.Dde_1692Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cof [...]
gcvH protein networkhttps://string-db.org/network/207559.Dde_1693Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
Dde_1694 protein networkhttps://string-db.org/network/207559.Dde_1694KEGG: dvm:DvMF_0226 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_1695 protein networkhttps://string-db.org/network/207559.Dde_1695TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; KEGG: dvm:DvMF_0227 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/al [...]
Dde_1696 protein networkhttps://string-db.org/network/207559.Dde_1696KEGG: dvm:DvMF_2247 channel protein, hemolysin III family; TIGRFAM: HylII; PFAM: Hly-III related.
Dde_1697 protein networkhttps://string-db.org/network/207559.Dde_1697Multi-sensor hybrid histidine kinase; KEGG: dma:DMR_25470 two-component hybrid sensor and regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region [...]
ychF protein networkhttps://string-db.org/network/207559.Dde_1698GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
Dde_1699 protein networkhttps://string-db.org/network/207559.Dde_1699KEGG: dvl:Dvul_1646 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; Belongs to the peptidase M16 family.
Dde_1700 protein networkhttps://string-db.org/network/207559.Dde_1700Hpt protein; KEGG: dvm:DvMF_0237 putative CheA signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine [...]
Dde_1701 protein networkhttps://string-db.org/network/207559.Dde_1701Protein of unknown function DUF2344; KEGG: dvl:Dvul_1644 radical SAM domain-containing protein; PFAM: Protein of unknown function DUF2344; Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_1702 protein networkhttps://string-db.org/network/207559.Dde_1702KEGG: dvl:Dvul_1643 hypothetical protein.
Dde_1703 protein networkhttps://string-db.org/network/207559.Dde_1703PFAM: Major facilitator superfamily MFS-1; KEGG: dvu:DVU1435 hypothetical protein.
Dde_1704 protein networkhttps://string-db.org/network/207559.Dde_1704Hypothetical protein.
Dde_1705 protein networkhttps://string-db.org/network/207559.Dde_1705DRTGG domain protein; PFAM: DRTGG; KEGG: dvm:DvMF_0242 DRTGG domain protein.
rnc protein networkhttps://string-db.org/network/207559.Dde_1708Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
Dde_1709 protein networkhttps://string-db.org/network/207559.Dde_1709Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
Dde_1710 protein networkhttps://string-db.org/network/207559.Dde_1710Hypothetical protein; KEGG: dvl:Dvul_1637 flagellin FlaG.
Dde_1711 protein networkhttps://string-db.org/network/207559.Dde_1711Flagellar hook-basal body protein; KEGG: dvm:DvMF_0246 protein of unknown function DUF1078 domain protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function D [...]
Dde_1712 protein networkhttps://string-db.org/network/207559.Dde_1712Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
Dde_1713 protein networkhttps://string-db.org/network/207559.Dde_1713PFAM: Flagellar hook-length control protein; KEGG: dvm:DvMF_0248 flagellar hook-length control protein.
Dde_1714 protein networkhttps://string-db.org/network/207559.Dde_1714PFAM: Glycosyl transferase, family 9; KEGG: dvm:DvMF_0249 glycosyl transferase family 9.
Dde_1715 protein networkhttps://string-db.org/network/207559.Dde_1715KEGG: dvm:DvMF_0250 CgeB family protein.
Dde_1716 protein networkhttps://string-db.org/network/207559.Dde_1716PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dsa:Desal_3352 OmpA/MotB domain protein.
Dde_1717 protein networkhttps://string-db.org/network/207559.Dde_1717PFAM: MotA/TolQ/ExbB proton channel; KEGG: das:Daes_1674 MotA/TolQ/ExbB proton channel.
Dde_1718 protein networkhttps://string-db.org/network/207559.Dde_1718PFAM: Protein of unknown function DUF342; KEGG: dvm:DvMF_0251 protein of unknown function DUF342.
Dde_1719 protein networkhttps://string-db.org/network/207559.Dde_1719KEGG: dsa:Desal_3349 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS.
Dde_1720 protein networkhttps://string-db.org/network/207559.Dde_1720KEGG: dvu:DVU2006 hypothetical protein.
Dde_1721 protein networkhttps://string-db.org/network/207559.Dde_1721KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_1722 protein networkhttps://string-db.org/network/207559.Dde_1722Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase-like; KEGG: dvm:DvMF_0253 putative signal transduction histidine kinase.
Dde_1723 protein networkhttps://string-db.org/network/207559.Dde_1723KEGG: dsa:Desal_1148 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Sporulation stage II, protein E C-terminal; SMART: Signal transduction res [...]
dtd protein networkhttps://string-db.org/network/207559.Dde_1724D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
Dde_1725 protein networkhttps://string-db.org/network/207559.Dde_1725KEGG: dvm:DvMF_0256 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
ispDF protein networkhttps://string-db.org/network/207559.Dde_17262-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-p [...]
Dde_1728 protein networkhttps://string-db.org/network/207559.Dde_1728PFAM: Protein of unknown function DUF164; KEGG: dvm:DvMF_0258 protein of unknown function DUF164.
Dde_1729 protein networkhttps://string-db.org/network/207559.Dde_1729KEGG: dvu:DVU1456 NIF3 family protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
Dde_1730 protein networkhttps://string-db.org/network/207559.Dde_1730Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: dma:DMR_18340 site-specific recombinase; Belongs to the 'phage' integrase family.
Dde_1731 protein networkhttps://string-db.org/network/207559.Dde_1731KEGG: dba:Dbac_0897 phage regulatory protein, Rha family; TIGRFAM: Phage regulatory protein, Rha; PFAM: Phage regulatory protein, Rha-like.
Dde_1732 protein networkhttps://string-db.org/network/207559.Dde_1732Prophage antirepressor; PFAM: BRO, N-terminal; KEGG: gka:GK0519 phage associated-antirepressor.
Dde_1734 protein networkhttps://string-db.org/network/207559.Dde_1734Hypothetical protein.
Dde_1735 protein networkhttps://string-db.org/network/207559.Dde_1735Resolvase domain-containing protein; KEGG: dar:Daro_3523 resolvase, N-terminal:resolvase helix-turn-helix region; PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; SMART: Resolvase [...]
Dde_1737 protein networkhttps://string-db.org/network/207559.Dde_1737Phage regulatory protein, Rha family; KEGG: efa:EF2037 antirepressor, putative; TIGRFAM: Phage regulatory protein, Rha; PFAM: Phage regulatory protein, Rha-like.
Dde_1738 protein networkhttps://string-db.org/network/207559.Dde_1738PFAM: Heat shock protein Hsp20; KEGG: sfu:Sfum_2860 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_1739 protein networkhttps://string-db.org/network/207559.Dde_1739PFAM: Phage P22, antirepressor protein, N-terminal; KEGG: lhk:LHK_01530 antirepressor protein.
Dde_1741 protein networkhttps://string-db.org/network/207559.Dde_1741Prophage antirepressor; PFAM: BRO, N-terminal; KEGG: bbp:BBPR_0883 phage antirepressor protein.
Dde_1742 protein networkhttps://string-db.org/network/207559.Dde_1742PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: noc:Noc_2927 type III restriction enzyme, res subunit; SMART: DEAD-like helicase, N-terminal.
Dde_1747 protein networkhttps://string-db.org/network/207559.Dde_1747KEGG: nth:Nther_0363 hypothetical protein.
Dde_1748 protein networkhttps://string-db.org/network/207559.Dde_1748Helicase domain-containing protein; KEGG: dat:HRM2_p00390 putative DNA/RNA-dependent helicase, SNF II family domain protein; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helic [...]
Dde_1752 protein networkhttps://string-db.org/network/207559.Dde_1752Methyl-accepting chemotaxis sensory transducer with HNOB (heme) sensor; KEGG: dma:DMR_25630 putative methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; H [...]
Dde_1753 protein networkhttps://string-db.org/network/207559.Dde_1753Protein of unknown function UPF0057; PFAM: Uncharacterized protein family UPF0057; KEGG: pat:Patl_4140 hypothetical protein.
Dde_1755 protein networkhttps://string-db.org/network/207559.Dde_1755KEGG: dsa:Desal_2566 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting [...]
rsfS protein networkhttps://string-db.org/network/207559.Dde_1756Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S r [...]
gpmI protein networkhttps://string-db.org/network/207559.Dde_1757Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
Dde_1758 protein networkhttps://string-db.org/network/207559.Dde_1758KEGG: dvm:DvMF_0438 hypothetical protein.
Dde_1759 protein networkhttps://string-db.org/network/207559.Dde_1759KEGG: dal:Dalk_4092 hypothetical protein.
Dde_1761 protein networkhttps://string-db.org/network/207559.Dde_1761PFAM: Sodium:neurotransmitter symporter; KEGG: dat:HRM2_44940 Na+-dependent transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
Dde_1762 protein networkhttps://string-db.org/network/207559.Dde_1762Hypothetical protein.
Dde_1763 protein networkhttps://string-db.org/network/207559.Dde_1763KEGG: dvl:Dvul_1513 hypothetical protein.
Dde_1764 protein networkhttps://string-db.org/network/207559.Dde_1764KEGG: dvm:DvMF_0434 phosphoribosylformylglycinamidine synthase.
pyrG protein networkhttps://string-db.org/network/207559.Dde_1765CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
kdsA protein networkhttps://string-db.org/network/207559.Dde_17662-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; KEGG: dvu:DVU1624 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA.
Dde_1767 protein networkhttps://string-db.org/network/207559.Dde_1767TIGRFAM: Phosphatase KdsC; KEGG: dvm:DvMF_0431 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: HAD superfamily hydrolase-like, type 3.
Dde_1768 protein networkhttps://string-db.org/network/207559.Dde_1768KEGG: dvm:DvMF_0430 protein of unknown function DUF1239.
Dde_1769 protein networkhttps://string-db.org/network/207559.Dde_1769PFAM: OstA-like protein; KEGG: dvm:DvMF_0429 OstA family protein.
Dde_1770 protein networkhttps://string-db.org/network/207559.Dde_1770Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_0428 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_1771 protein networkhttps://string-db.org/network/207559.Dde_1771RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
hpf protein networkhttps://string-db.org/network/207559.Dde_1772Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and som [...]
Dde_1773 protein networkhttps://string-db.org/network/207559.Dde_1773Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: das:Daes_1477 phosphoenolpyruvate-dependent sugar phosph [...]
Dde_1774 protein networkhttps://string-db.org/network/207559.Dde_1774UPF0042 nucleotide-binding protein yhbJ; Displays ATPase and GTPase activities.
Dde_1775 protein networkhttps://string-db.org/network/207559.Dde_1775PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: dvl:Dvul_1501 PTS system fructose subfamily IIA component.
Dde_1776 protein networkhttps://string-db.org/network/207559.Dde_1776PFAM: Phosphotransferase system, sorbose subfamily IIB component; KEGG: dvm:DvMF_0422 PTS system sorbose subfamily IIB component.
Dde_1777 protein networkhttps://string-db.org/network/207559.Dde_1777KEGG: dvl:Dvul_1499 hypothetical protein.
Dde_1778 protein networkhttps://string-db.org/network/207559.Dde_1778Inorganic diphosphatase; KEGG: dvm:DvMF_0420 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2; Phosphoesterase, RecJ-like.
tadA protein networkhttps://string-db.org/network/207559.Dde_1779CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
Dde_1780 protein networkhttps://string-db.org/network/207559.Dde_1780KEGG: dvl:Dvul_1602 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; Belongs to the LOG family.
Dde_1781 protein networkhttps://string-db.org/network/207559.Dde_1781RNA-metabolising metallo-beta-lactamase; KEGG: dvl:Dvul_1601 beta-lactamase domain-containing protein; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like.
Dde_1782 protein networkhttps://string-db.org/network/207559.Dde_1782Methyltransferase; KEGG: dvl:Dvul_1600 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase putative.
coaD protein networkhttps://string-db.org/network/207559.Dde_1783Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
miaA protein networkhttps://string-db.org/network/207559.Dde_1784tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(di [...]
Dde_1785 protein networkhttps://string-db.org/network/207559.Dde_1785KEGG: dol:Dole_0035 SpoIID/LytB domain-containing protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
Dde_1786 protein networkhttps://string-db.org/network/207559.Dde_1786PFAM: Lytic transglycosylase-like, catalytic; KEGG: das:Daes_2040 lytic transglycosylase catalytic.
Dde_1787 protein networkhttps://string-db.org/network/207559.Dde_1787PFAM: Outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_1594 outer membrane chaperone Skp (OmpH).
Dde_1788 protein networkhttps://string-db.org/network/207559.Dde_1788PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: sat:SYN_02087 putative cytoplasmic protein.
Dde_1789 protein networkhttps://string-db.org/network/207559.Dde_1789PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: dvm:DvMF_0181 phosphoadenosine phosphosulfate reductase.
Dde_1790 protein networkhttps://string-db.org/network/207559.Dde_1790KEGG: dvu:DVU1567 hypothetical protein.
Dde_1791 protein networkhttps://string-db.org/network/207559.Dde_1791Ferroxidase; Iron-storage protein.
Dde_1792 protein networkhttps://string-db.org/network/207559.Dde_1792TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N [...]
Dde_1793 protein networkhttps://string-db.org/network/207559.Dde_1793TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; KEGG: dvm:DvMF_0185 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate [...]
Dde_1794 protein networkhttps://string-db.org/network/207559.Dde_1794KEGG: dba:Dbac_0540 putative cytoplasmic protein.
Dde_1795 protein networkhttps://string-db.org/network/207559.Dde_1795KEGG: dvm:DvMF_0187 hypothetical protein.
Dde_1796 protein networkhttps://string-db.org/network/207559.Dde_1796Fructose-1,6-bisphosphatase, class II; TIGRFAM: GlpX; KEGG: dvl:Dvul_1592 fructose 1,6-bisphosphatase II; PFAM: GlpX.
dapA protein networkhttps://string-db.org/network/207559.Dde_1797Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
dapF protein networkhttps://string-db.org/network/207559.Dde_1798Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
Dde_1799 protein networkhttps://string-db.org/network/207559.Dde_1799KEGG: dvm:DvMF_0558 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
Dde_1800 protein networkhttps://string-db.org/network/207559.Dde_1800KEGG: dvl:Dvul_1300 flagellar synthesis regulator FleN.
Dde_1801 protein networkhttps://string-db.org/network/207559.Dde_1801TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dvl:Dvul_1301 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_1802 protein networkhttps://string-db.org/network/207559.Dde_1802KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_1803 protein networkhttps://string-db.org/network/207559.Dde_1803KEGG: dvu:DVU2006 hypothetical protein.
Dde_1804 protein networkhttps://string-db.org/network/207559.Dde_1804GGDEF domain containing protein; PFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_0556 diguanylate cyclase.
prfB protein networkhttps://string-db.org/network/207559.Dde_1805Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
lnt protein networkhttps://string-db.org/network/207559.Dde_1806Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
Dde_1807 protein networkhttps://string-db.org/network/207559.Dde_1807KEGG: dvm:DvMF_0553 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core.
Dde_1808 protein networkhttps://string-db.org/network/207559.Dde_1808KEGG: dvu:DVU1830 hypothetical protein.
mnmG protein networkhttps://string-db.org/network/207559.Dde_1809Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
Dde_1810 protein networkhttps://string-db.org/network/207559.Dde_1810KEGG: dvm:DvMF_0550 diaminopimelate aminotransferase; TIGRFAM: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
Dde_1811 protein networkhttps://string-db.org/network/207559.Dde_1811KEGG: dvl:Dvul_1334 hypothetical protein.
mtaD protein networkhttps://string-db.org/network/207559.Dde_1812S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also ab [...]
Dde_1813 protein networkhttps://string-db.org/network/207559.Dde_1813KEGG: dvm:DvMF_0547 putative carboxylesterase.
Dde_1814 protein networkhttps://string-db.org/network/207559.Dde_1814KEGG: dvm:DvMF_0546 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Belongs to the glutamate synthase family.
Dde_1815 protein networkhttps://string-db.org/network/207559.Dde_1815PFAM: Glutamine amidotransferase, class-II; KEGG: dvm:DvMF_0545 glutamine amidotransferase class-II.
Dde_1816 protein networkhttps://string-db.org/network/207559.Dde_1816PFAM: Glutamate synthase, alpha subunit, C-terminal; KEGG: dvm:DvMF_0544 glutamate synthase alpha subunit domain protein.
yajC protein networkhttps://string-db.org/network/207559.Dde_1817Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into mem [...]
secD protein networkhttps://string-db.org/network/207559.Dde_1818Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
secF protein networkhttps://string-db.org/network/207559.Dde_1819Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
Dde_1821 protein networkhttps://string-db.org/network/207559.Dde_1821KEGG: dvm:DvMF_0538 cytochrome c class I.
Dde_1822 protein networkhttps://string-db.org/network/207559.Dde_1822Copper delivery protein (cytochrome c oxidase assembly); KEGG: dvu:DVU1816 hypothetical protein.
Dde_1823 protein networkhttps://string-db.org/network/207559.Dde_1823Cytochrome aa3-type quinol oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the en [...]
Dde_1824 protein networkhttps://string-db.org/network/207559.Dde_1824PFAM: Cytochrome c oxidase, subunit III; KEGG: dvm:DvMF_0535 cytochrome c oxidase subunit III.
Dde_1825 protein networkhttps://string-db.org/network/207559.Dde_1825TIGRFAM: Caa(3)-type oxidase, subunit IV; KEGG: dvl:Dvul_1347 caa(3)-type oxidase, subunit IV.
Dde_1826 protein networkhttps://string-db.org/network/207559.Dde_1826Cytochrome aa3-type quinol oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the [...]
ctaB protein networkhttps://string-db.org/network/207559.Dde_1827Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
Dde_1828 protein networkhttps://string-db.org/network/207559.Dde_1828KEGG: dvm:DvMF_0531 hypothetical protein.
Dde_1829 protein networkhttps://string-db.org/network/207559.Dde_1829L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
Dde_1830 protein networkhttps://string-db.org/network/207559.Dde_1830Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
Dde_1831 protein networkhttps://string-db.org/network/207559.Dde_1831TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: dvl:Dvul_1353 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
Dde_1832 protein networkhttps://string-db.org/network/207559.Dde_1832Magnesium transporter; Acts as a magnesium transporter.
Dde_1833 protein networkhttps://string-db.org/network/207559.Dde_1833Protein of unknown function DUF165; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q [...]
Dde_1834 protein networkhttps://string-db.org/network/207559.Dde_1834TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_0509 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_1835 protein networkhttps://string-db.org/network/207559.Dde_1835PFAM: Glycosyl transferase, group 1; KEGG: dvm:DvMF_0508 glycosyl transferase group 1.
Dde_1836 protein networkhttps://string-db.org/network/207559.Dde_1836PFAM: Glycosyl transferase, group 1; KEGG: dvu:DVU1803 glycosyl transferase group 1 family protein.
Dde_1837 protein networkhttps://string-db.org/network/207559.Dde_1837PFAM: Lipase, class 2; KEGG: dvm:DvMF_0506 PGAP1 family protein.
Dde_1838 protein networkhttps://string-db.org/network/207559.Dde_1838KEGG: dvm:DvMF_0505 hypothetical protein.
Dde_1839 protein networkhttps://string-db.org/network/207559.Dde_1839KEGG: bpe:BP0516 hypothetical protein.
Dde_1840 protein networkhttps://string-db.org/network/207559.Dde_1840KEGG: dvl:Dvul_1373 multiple antibiotic resistance (MarC)-related proteins; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related.
Dde_1841 protein networkhttps://string-db.org/network/207559.Dde_1841Serine 3-dehydrogenase; KEGG: dvl:Dvul_1374 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) fami [...]
Dde_1842 protein networkhttps://string-db.org/network/207559.Dde_1842PFAM: Cysteine-rich region, CCG; KEGG: dvm:DvMF_0397 protein of unknown function DUF224 cysteine-rich region domain protein.
Dde_1843 protein networkhttps://string-db.org/network/207559.Dde_1843KEGG: dvm:DvMF_0396 iron-sulfur cluster binding protein; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Protein of unknown function DUF162.
Dde_1844 protein networkhttps://string-db.org/network/207559.Dde_1844Lactate utilization protein B/C; PFAM: Protein of unknown function DUF162; KEGG: dvm:DvMF_0395 protein of unknown function DUF162.
Dde_1846 protein networkhttps://string-db.org/network/207559.Dde_1846KEGG: drt:Dret_1483 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter.
Dde_1847 protein networkhttps://string-db.org/network/207559.Dde_1847KEGG: dma:DMR_13260 hypothetical membrane protein.
Dde_1849 protein networkhttps://string-db.org/network/207559.Dde_1849PFAM: Type IV pilus assembly PilZ; KEGG: dvl:Dvul_3080 type IV pilus assembly PilZ.
Dde_1852 protein networkhttps://string-db.org/network/207559.Dde_1852PFAM: Glycosyl transferase, group 1; KEGG: das:Daes_1664 group 1 glycosyl transferase.
Dde_1853 protein networkhttps://string-db.org/network/207559.Dde_1853KEGG: das:Daes_1663 hypothetical protein.
Dde_1854 protein networkhttps://string-db.org/network/207559.Dde_1854KEGG: das:Daes_1662 CACA family Na+/Ca+ antiporter; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region.
Dde_1855 protein networkhttps://string-db.org/network/207559.Dde_1855PFAM: Peptidase M48, Ste24p; KEGG: das:Daes_1661 peptidase M48 Ste24p.
Dde_1856 protein networkhttps://string-db.org/network/207559.Dde_1856PFAM: Mechanosensitive ion channel MscS; KEGG: das:Daes_1660 mechanosensitive ion channel protein MscS.
Dde_1857 protein networkhttps://string-db.org/network/207559.Dde_1857Hypothetical protein.
Dde_1858 protein networkhttps://string-db.org/network/207559.Dde_1858PFAM: Restriction endonuclease, type IV-like, Mrr; Protein of unknown function DUF511; KEGG: geb:GM18_2920 restriction endonuclease.
Dde_1859 protein networkhttps://string-db.org/network/207559.Dde_1859KEGG: geb:GM18_2921 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res sub [...]
Dde_1860 protein networkhttps://string-db.org/network/207559.Dde_1860KEGG: geb:GM18_2923 restriction modification system DNA specificity domain-containing protein.
Dde_1861 protein networkhttps://string-db.org/network/207559.Dde_1861PFAM: DNA methylase, adenine-specific; KEGG: geb:GM18_2924 N-6 DNA methylase.
Dde_1862 protein networkhttps://string-db.org/network/207559.Dde_1862KEGG: geb:GM18_2925 excisionase family DNA-binding domain-containing protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory.
Dde_1863 protein networkhttps://string-db.org/network/207559.Dde_1863AIG2 family protein; PFAM: AIG2-like; KEGG: geb:GM18_2926 AIG2 family protein.
Dde_1864 protein networkhttps://string-db.org/network/207559.Dde_1864KEGG: dly:Dehly_1631 glucosamine 6-phosphate synthetase-like protein.
Dde_1865 protein networkhttps://string-db.org/network/207559.Dde_1865KEGG: das:Daes_1648 hypothetical protein.
Dde_1866 protein networkhttps://string-db.org/network/207559.Dde_1866KEGG: das:Daes_1647 putative amidoligase enzyme.
Dde_1867 protein networkhttps://string-db.org/network/207559.Dde_1867KEGG: dly:Dehly_1634 hypothetical protein.
Dde_1868 protein networkhttps://string-db.org/network/207559.Dde_1868KEGG: dly:Dehly_1635 BNR repeat-containing glycosyl hydrolase.
Dde_1869 protein networkhttps://string-db.org/network/207559.Dde_1869KEGG: das:Daes_1644 hypothetical protein.
Dde_1870 protein networkhttps://string-db.org/network/207559.Dde_1870KEGG: sfu:Sfum_3836 hypothetical protein.
Dde_1871 protein networkhttps://string-db.org/network/207559.Dde_1871KEGG: sfu:Sfum_3835 hypothetical protein.
Dde_1872 protein networkhttps://string-db.org/network/207559.Dde_1872KEGG: sfu:Sfum_3834 hypothetical protein.
Dde_1873 protein networkhttps://string-db.org/network/207559.Dde_1873KEGG: sfu:Sfum_3833 phage tail protein; TIGRFAM: Phage tail protein; PFAM: Phage tail protein I.
Dde_1874 protein networkhttps://string-db.org/network/207559.Dde_1874PFAM: Baseplate assembly protein J-like, predicted; KEGG: das:Daes_1639 baseplate J family protein.
Dde_1875 protein networkhttps://string-db.org/network/207559.Dde_1875GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: das:Daes_1638 gpW/GP25 family protein.
Dde_1876 protein networkhttps://string-db.org/network/207559.Dde_1876KEGG: sfu:Sfum_3830 hypothetical protein.
Dde_1877 protein networkhttps://string-db.org/network/207559.Dde_1877KEGG: das:Daes_1636 hypothetical protein.
Dde_1878 protein networkhttps://string-db.org/network/207559.Dde_1878KEGG: dly:Dehly_1645 PaaR repeat-containing protein.
Dde_1879 protein networkhttps://string-db.org/network/207559.Dde_1879KEGG: geb:GM18_2943 hypothetical protein.
Dde_1880 protein networkhttps://string-db.org/network/207559.Dde_1880KEGG: das:Daes_1632 hypothetical protein.
Dde_1881 protein networkhttps://string-db.org/network/207559.Dde_1881PFAM: Protein of unknown function DUF1353; KEGG: das:Daes_1631 hypothetical protein.
Dde_1882 protein networkhttps://string-db.org/network/207559.Dde_1882PFAM: Peptidase M15A, C-terminal; KEGG: dbr:Deba_1793 peptidase M15A.
Dde_1883 protein networkhttps://string-db.org/network/207559.Dde_1883KEGG: das:Daes_1629 phage protein D-like protein.
Dde_1884 protein networkhttps://string-db.org/network/207559.Dde_1884KEGG: dly:Dehly_1652 hypothetical protein.
Dde_1885 protein networkhttps://string-db.org/network/207559.Dde_1885KEGG: dly:Dehly_1653 hypothetical protein.
Dde_1886 protein networkhttps://string-db.org/network/207559.Dde_1886KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region.
Dde_1887 protein networkhttps://string-db.org/network/207559.Dde_1887KEGG: das:Daes_1624 hypothetical protein.
Dde_1888 protein networkhttps://string-db.org/network/207559.Dde_1888PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; KEGG: sfu:Sfum_3816 hypothetical protein.
Dde_1889 protein networkhttps://string-db.org/network/207559.Dde_1889KEGG: geb:GM18_2954 phage tail sheath protein.
Dde_1890 protein networkhttps://string-db.org/network/207559.Dde_1890KEGG: das:Daes_1620 hypothetical protein.
Dde_1891 protein networkhttps://string-db.org/network/207559.Dde_1891PFAM: Metallophosphoesterase; KEGG: dol:Dole_0975 metallophosphoesterase.
Dde_1892 protein networkhttps://string-db.org/network/207559.Dde_1892Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cwo:Cwoe_4876 transcriptional regulator, TetR family.
Dde_1893 protein networkhttps://string-db.org/network/207559.Dde_1893ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: sat:SYN_02218 cation transport ATPase; PFAM: ATPase, P-type, ATP [...]
Dde_1895 protein networkhttps://string-db.org/network/207559.Dde_1895KEGG: sfu:Sfum_1508 hypothetical protein.
Dde_1896 protein networkhttps://string-db.org/network/207559.Dde_1896PFAM: Dihaem cytochrome c; KEGG: dol:Dole_3094 putative lipoprotein.
Dde_1897 protein networkhttps://string-db.org/network/207559.Dde_1897Protein of unknown function DUF107; PFAM: Nodulation efficiency, NfeD; KEGG: sfu:Sfum_1509 hypothetical protein.
Dde_1899 protein networkhttps://string-db.org/network/207559.Dde_1899KEGG: das:Daes_1619 hypothetical protein.
Dde_1900 protein networkhttps://string-db.org/network/207559.Dde_1900KEGG: geb:GM18_2959 hypothetical protein.
Dde_1901 protein networkhttps://string-db.org/network/207559.Dde_1901KEGG: geb:GM18_2960 hypothetical protein.
Dde_1902 protein networkhttps://string-db.org/network/207559.Dde_1902KEGG: dbr:Deba_1814 hypothetical protein.
Dde_1903 protein networkhttps://string-db.org/network/207559.Dde_1903KEGG: sfu:Sfum_3807 hypothetical protein.
Dde_1904 protein networkhttps://string-db.org/network/207559.Dde_1904KEGG: dbr:Deba_1816 site-specific DNA-methyltransferase (adenine-specific); PFAM: D12 class N6 adenine-specific DNA methyltransferase.
Dde_1905 protein networkhttps://string-db.org/network/207559.Dde_1905KEGG: geb:GM18_2964 hypothetical protein.
Dde_1906 protein networkhttps://string-db.org/network/207559.Dde_1906KEGG: sfu:Sfum_3804 hypothetical protein.
Dde_1907 protein networkhttps://string-db.org/network/207559.Dde_1907KEGG: geb:GM18_2966 phage head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage putative head morphogenesis protein, SPP1 gp7.
Dde_1908 protein networkhttps://string-db.org/network/207559.Dde_1908KEGG: dbr:Deba_1820 hypothetical protein.
Dde_1909 protein networkhttps://string-db.org/network/207559.Dde_1909KEGG: sfu:Sfum_3801 hypothetical protein.
Dde_1910 protein networkhttps://string-db.org/network/207559.Dde_1910KEGG: dbr:Deba_1822 hypothetical protein.
Dde_1911 protein networkhttps://string-db.org/network/207559.Dde_1911KEGG: sfu:Sfum_3799 hypothetical protein.
Dde_1912 protein networkhttps://string-db.org/network/207559.Dde_1912KEGG: dly:Dehly_1683 hypothetical protein.
Dde_1913 protein networkhttps://string-db.org/network/207559.Dde_1913KEGG: dbr:Deba_1825 hypothetical protein; Belongs to the 'phage' integrase family.
Dde_1914 protein networkhttps://string-db.org/network/207559.Dde_1914Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: dbr:Deba_1826 integrase family protein; Belongs to the 'phage' integrase family.
Dde_1915 protein networkhttps://string-db.org/network/207559.Dde_1915KEGG: dbr:Deba_1827 hypothetical protein.
Dde_1916 protein networkhttps://string-db.org/network/207559.Dde_1916KEGG: das:Daes_1595 hypothetical protein.
Dde_1917 protein networkhttps://string-db.org/network/207559.Dde_1917KEGG: das:Daes_1594 hypothetical protein.
Dde_1919 protein networkhttps://string-db.org/network/207559.Dde_1919KEGG: sfu:Sfum_3792 abortive phage resistance protein-like protein.
Dde_1920 protein networkhttps://string-db.org/network/207559.Dde_1920KEGG: sfu:Sfum_3791 abortive phage resistance protein-like protein.
Dde_1921 protein networkhttps://string-db.org/network/207559.Dde_1921PFAM: DNA primase, catalytic core, N-terminal; KEGG: sfu:Sfum_3790 DNA primase catalytic core.
Dde_1922 protein networkhttps://string-db.org/network/207559.Dde_1922KEGG: dly:Dehly_1690 UvrD/REP helicase.
Dde_1923 protein networkhttps://string-db.org/network/207559.Dde_1923PFAM: ERCC4 domain; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein.
Dde_1924 protein networkhttps://string-db.org/network/207559.Dde_1924PFAM: Protein of unknown function DUF669; KEGG: sfu:Sfum_3787 hypothetical protein.
Dde_1925 protein networkhttps://string-db.org/network/207559.Dde_1925KEGG: sfu:Sfum_3786 hypothetical protein.
Dde_1926 protein networkhttps://string-db.org/network/207559.Dde_1926KEGG: dly:Dehly_1694 hypothetical protein.
Dde_1927 protein networkhttps://string-db.org/network/207559.Dde_1927KEGG: geb:GM18_2985 hypothetical protein.
Dde_1928 protein networkhttps://string-db.org/network/207559.Dde_1928KEGG: sfu:Sfum_3783 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2.
Dde_1929 protein networkhttps://string-db.org/network/207559.Dde_1929KEGG: dly:Dehly_1697 hypothetical protein.
Dde_1930 protein networkhttps://string-db.org/network/207559.Dde_1930KEGG: dbr:Deba_1839 hypothetical protein.
Dde_1931 protein networkhttps://string-db.org/network/207559.Dde_1931KEGG: sfu:Sfum_3780 hypothetical protein.
Dde_1932 protein networkhttps://string-db.org/network/207559.Dde_1932SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response).
Dde_1933 protein networkhttps://string-db.org/network/207559.Dde_1933KEGG: das:Daes_1581 hypothetical protein.
Dde_1934 protein networkhttps://string-db.org/network/207559.Dde_1934KEGG: dly:Dehly_1702 putative bacteriophage-like protein.
Dde_1935 protein networkhttps://string-db.org/network/207559.Dde_1935KEGG: das:Daes_1579 resolvase domain-containing protein; PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal.
Dde_1936 protein networkhttps://string-db.org/network/207559.Dde_1936KEGG: dly:Dehly_1704 putative phage-like protein.
Dde_1940 protein networkhttps://string-db.org/network/207559.Dde_1940KEGG: dvm:DvMF_0386 hypothetical protein.
Dde_1941 protein networkhttps://string-db.org/network/207559.Dde_1941KEGG: mgm:Mmc1_3271 PAS/PAC sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, s [...]
Dde_1942 protein networkhttps://string-db.org/network/207559.Dde_1942KEGG: dar:Daro_3553 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction [...]
Dde_1944 protein networkhttps://string-db.org/network/207559.Dde_1944PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
uppP protein networkhttps://string-db.org/network/207559.Dde_1946Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
Dde_1947 protein networkhttps://string-db.org/network/207559.Dde_1947Hypothetical protein.
Dde_1948 protein networkhttps://string-db.org/network/207559.Dde_1948PFAM: Permease YjgP/YjgQ, predicted; KEGG: dvm:DvMF_0376 permease YjgP/YjgQ family protein.
Dde_1949 protein networkhttps://string-db.org/network/207559.Dde_1949PFAM: Permease YjgP/YjgQ, predicted; KEGG: dvl:Dvul_1424 permease YjgP/YjgQ family protein.
engB protein networkhttps://string-db.org/network/207559.Dde_1950Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase sup [...]
aroQ protein networkhttps://string-db.org/network/207559.Dde_19523-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
efp protein networkhttps://string-db.org/network/207559.Dde_1953Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...]
Dde_1955 protein networkhttps://string-db.org/network/207559.Dde_1955PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: dvl:Dvul_1420 cell division FtsK/SpoIIIE.
Dde_1956 protein networkhttps://string-db.org/network/207559.Dde_1956Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the re [...]
Dde_1958 protein networkhttps://string-db.org/network/207559.Dde_1958TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dvm:DvMF_0369 pseudouridine synthase; SMART: RNA-binding S4; Belongs [...]
Dde_1959 protein networkhttps://string-db.org/network/207559.Dde_1959TIGRFAM: SirA-related, selenium metabolism; KEGG: dvm:DvMF_0368 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
Dde_1960 protein networkhttps://string-db.org/network/207559.Dde_1960Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmemb [...]
Dde_1961 protein networkhttps://string-db.org/network/207559.Dde_1961PFAM: Protein of unknown function DUF374; KEGG: dvm:DvMF_0366 protein of unknown function DUF374.
Dde_1962 protein networkhttps://string-db.org/network/207559.Dde_1962PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: dvm:DvMF_0365 lipid A biosynthesis acyltransferase.
Dde_1968 protein networkhttps://string-db.org/network/207559.Dde_1968KEGG: dvm:DvMF_0363 TRASH domain protein.
Dde_1969 protein networkhttps://string-db.org/network/207559.Dde_1969KEGG: dvl:Dvul_1430 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpteri [...]
dapL protein networkhttps://string-db.org/network/207559.Dde_1970LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion [...]
xerC-2 protein networkhttps://string-db.org/network/207559.Dde_1971Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert [...]
Dde_1972 protein networkhttps://string-db.org/network/207559.Dde_1972PFAM: Polynucleotide adenylyltransferase region; Cystathionine beta-synthase, core; Phosphoesterase, DHHA1; Phosphoesterase, RecJ-like; KEGG: dvl:Dvul_1433 polynucleotide adenylyltransferase regi [...]
Dde_1973 protein networkhttps://string-db.org/network/207559.Dde_1973PFAM: Histidine triad (HIT) protein; KEGG: dvl:Dvul_1434 histidine triad (HIT) protein.
Dde_1974 protein networkhttps://string-db.org/network/207559.Dde_1974KEGG: dvm:DvMF_0357 histidine triad (HIT) protein.
Dde_1975 protein networkhttps://string-db.org/network/207559.Dde_1975KEGG: dvm:DvMF_0356 tetratricopeptide TPR_4.
mutS protein networkhttps://string-db.org/network/207559.Dde_1976DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
Dde_1977 protein networkhttps://string-db.org/network/207559.Dde_1977Lipoprotein; KEGG: dvl:Dvul_1438 lipoprotein.
lysA protein networkhttps://string-db.org/network/207559.Dde_1978Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
mgsA protein networkhttps://string-db.org/network/207559.Dde_1979Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
Dde_1980 protein networkhttps://string-db.org/network/207559.Dde_1980KEGG: dvm:DvMF_0352 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Bacteriophage CI repressor; SMART: Helix-turn-helix type 3.
Dde_1981 protein networkhttps://string-db.org/network/207559.Dde_1981Hypothetical protein.
Dde_1982 protein networkhttps://string-db.org/network/207559.Dde_1982PFAM: Protein of unknown function DUF330; KEGG: dvm:DvMF_0041 protein of unknown function DUF330.
Dde_1983 protein networkhttps://string-db.org/network/207559.Dde_1983PFAM: Mammalian cell entry related; KEGG: dma:DMR_32920 hypothetical protein.
Dde_1984 protein networkhttps://string-db.org/network/207559.Dde_1984Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dma:DMR_32930 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_1985 protein networkhttps://string-db.org/network/207559.Dde_1985PFAM: Protein of unknown function DUF140; KEGG: dma:DMR_32940 putative ABC transporter permease protein.
Dde_1987 protein networkhttps://string-db.org/network/207559.Dde_1987PFAM: Glycosyl transferase, family 2; KEGG: lip:LI0929 cell wall biosynthesis glycosyltransferase.
Dde_1988 protein networkhttps://string-db.org/network/207559.Dde_1988Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
tpiA protein networkhttps://string-db.org/network/207559.Dde_1989Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
Dde_1990 protein networkhttps://string-db.org/network/207559.Dde_1990KEGG: dvl:Dvul_1409 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase.
Dde_1991 protein networkhttps://string-db.org/network/207559.Dde_1991PFAM: NUDIX hydrolase domain; KEGG: dvm:DvMF_0346 NUDIX hydrolase.
Dde_1992 protein networkhttps://string-db.org/network/207559.Dde_1992PFAM: Inositol monophosphatase; KEGG: dvm:DvMF_0345 inositol-phosphate phosphatase.
Dde_1993 protein networkhttps://string-db.org/network/207559.Dde_1993KEGG: dvm:DvMF_0344 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl.
Dde_1994 protein networkhttps://string-db.org/network/207559.Dde_1994GAF domain protein; KEGG: dvl:Dvul_1405 GAF sensor protein; PFAM: GAF; SMART: GAF.
Dde_1995 protein networkhttps://string-db.org/network/207559.Dde_1995KEGG: dvm:DvMF_0342 hypothetical protein.
Dde_1996 protein networkhttps://string-db.org/network/207559.Dde_1996TIGRFAM: Glycine cleavage system T protein; KEGG: dvl:Dvul_1403 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel.
Dde_1997 protein networkhttps://string-db.org/network/207559.Dde_1997Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subuni [...]
Dde_1998 protein networkhttps://string-db.org/network/207559.Dde_1998AAA ATPase central domain protein; KEGG: dvm:DvMF_0339 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core.
Dde_1999 protein networkhttps://string-db.org/network/207559.Dde_1999KEGG: dvm:DvMF_0338 glycosyl transferase, group 2 family protein.
Dde_2000 protein networkhttps://string-db.org/network/207559.Dde_2000PFAM: Transport-associated; KEGG: dsa:Desal_2103 transport-associated.
Dde_2001 protein networkhttps://string-db.org/network/207559.Dde_2001KEGG: dvl:Dvul_1399 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase.
Dde_2002 protein networkhttps://string-db.org/network/207559.Dde_2002PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dvm:DvMF_0336 transcriptional regulator, TetR family.
Dde_2003 protein networkhttps://string-db.org/network/207559.Dde_2003KEGG: dvm:DvMF_0335 hypothetical protein.
Dde_2004 protein networkhttps://string-db.org/network/207559.Dde_2004PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: dvu:DVU1693 glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
Dde_2007 protein networkhttps://string-db.org/network/207559.Dde_2007PFAM: Peptidase S16, lon C-terminal; KEGG: dvm:DvMF_0312 peptidase S16 lon domain protein.
Dde_2008 protein networkhttps://string-db.org/network/207559.Dde_2008PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_0311 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_2010 protein networkhttps://string-db.org/network/207559.Dde_2010PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dvm:DvMF_0310 PpiC-type peptidyl-prolyl cis-trans isomerase.
Dde_2011 protein networkhttps://string-db.org/network/207559.Dde_2011PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1.
Dde_2012 protein networkhttps://string-db.org/network/207559.Dde_2012KEGG: bja:bll4284 acetyl hydrolace.
Dde_2013 protein networkhttps://string-db.org/network/207559.Dde_2013Protease Do; SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dvl:Dvul_1611 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
hslU protein networkhttps://string-db.org/network/207559.Dde_2014Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by Hs [...]
argB protein networkhttps://string-db.org/network/207559.Dde_2015Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
pyrR protein networkhttps://string-db.org/network/207559.Dde_2016Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
Dde_2018 protein networkhttps://string-db.org/network/207559.Dde_2018HesB/YadR/YfhF-family protein; PFAM: FeS cluster biogenesis; KEGG: dvl:Dvul_2625 HesB/YadR/YfhF-family protein.
Dde_2020 protein networkhttps://string-db.org/network/207559.Dde_2020HesB/YadR/YfhF-family protein; PFAM: FeS cluster biogenesis; KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
Dde_2021 protein networkhttps://string-db.org/network/207559.Dde_2021KEGG: dvu:DVU1465 CgeB family protein.
Dde_2022 protein networkhttps://string-db.org/network/207559.Dde_2022PFAM: Glycosyl transferase, family 9; KEGG: dvu:DVU1464 heptosyltransferase family protein.
Dde_2023 protein networkhttps://string-db.org/network/207559.Dde_2023TIGRFAM: Sirohaem synthase, N-terminal; KEGG: dvm:DvMF_0298 siroheme synthase.
Dde_2024 protein networkhttps://string-db.org/network/207559.Dde_2024PFAM: Cytochrome c assembly protein; KEGG: dvm:DvMF_0297 cytochrome c assembly protein.
hemA protein networkhttps://string-db.org/network/207559.Dde_2025glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
Dde_2026 protein networkhttps://string-db.org/network/207559.Dde_2026KEGG: dvm:DvMF_0295 hypothetical protein.
tilS protein networkhttps://string-db.org/network/207559.Dde_2027tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
adk protein networkhttps://string-db.org/network/207559.Dde_2028Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
Dde_2029 protein networkhttps://string-db.org/network/207559.Dde_2029Potassium uptake protein, TrkH family; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
Dde_2030 protein networkhttps://string-db.org/network/207559.Dde_2030TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: drt:Dret_1970 potassium transporter peripheral membrane component.
rpsT protein networkhttps://string-db.org/network/207559.Dde_203130S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
Dde_2032 protein networkhttps://string-db.org/network/207559.Dde_2032PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
glyS protein networkhttps://string-db.org/network/207559.Dde_2033TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; KEGG: dvm:DvMF_0291 glycyl-tRNA synthetase, beta subunit.
glyQ protein networkhttps://string-db.org/network/207559.Dde_2034TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: dvm:DvMF_0290 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit.
recO protein networkhttps://string-db.org/network/207559.Dde_2035DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
Dde_2036 protein networkhttps://string-db.org/network/207559.Dde_2036Transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3; KEGG: dvm:DvMF_0288 transcriptional regulator, XRE family.
Dde_2037 protein networkhttps://string-db.org/network/207559.Dde_2037SurA domain-containing protein; PFAM: SurA N-terminal; KEGG: dvm:DvMF_0287 SurA domain protein.
Dde_2038 protein networkhttps://string-db.org/network/207559.Dde_2038SurA domain-containing protein; PFAM: SurA N-terminal; KEGG: dvm:DvMF_0286 hypothetical protein.
mfd protein networkhttps://string-db.org/network/207559.Dde_2039Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
Dde_2040 protein networkhttps://string-db.org/network/207559.Dde_2040KEGG: dvm:DvMF_0284 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
Dde_2041 protein networkhttps://string-db.org/network/207559.Dde_2041KEGG: dvm:DvMF_0283 hypothetical protein.
Dde_2042 protein networkhttps://string-db.org/network/207559.Dde_2042TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: dvm:DvMF_0282 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-term [...]
pdxJ protein networkhttps://string-db.org/network/207559.Dde_2043Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phos [...]
acpS protein networkhttps://string-db.org/network/207559.Dde_2044Phosphopantetheine-protein transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
nnrE protein networkhttps://string-db.org/network/207559.Dde_2045YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converte [...]
Dde_2046 protein networkhttps://string-db.org/network/207559.Dde_2046KEGG: dvm:DvMF_0278 CBS domain containing membrane protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
Dde_2047 protein networkhttps://string-db.org/network/207559.Dde_2047Uncharacterized protein family UPF0079, ATPase; KEGG: dvm:DvMF_0277 protein of unknown function UPF0079; TIGRFAM: Uncharacterized protein family UPF0079, ATPase bacteria; PFAM: Uncharacterized pr [...]
Dde_2048 protein networkhttps://string-db.org/network/207559.Dde_2048KEGG: dvm:DvMF_0276 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Belongs to the [...]
Dde_2049 protein networkhttps://string-db.org/network/207559.Dde_2049TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; KEGG: dvm:DvMF_0275 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: 2-isopropylmalate synthase LeuA [...]
Dde_2050 protein networkhttps://string-db.org/network/207559.Dde_2050TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dvl:Dvul_1372 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_2051 protein networkhttps://string-db.org/network/207559.Dde_2051KEGG: dvl:Dvul_1371 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like).
rpoD protein networkhttps://string-db.org/network/207559.Dde_2052RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma [...]
dnaG protein networkhttps://string-db.org/network/207559.Dde_2053DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
mutS2 protein networkhttps://string-db.org/network/207559.Dde_2054Smr protein/MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA [...]
Dde_2055 protein networkhttps://string-db.org/network/207559.Dde_2055KEGG: dvm:DvMF_0497 GatB/YqeY family protein.
rpsU protein networkhttps://string-db.org/network/207559.Dde_2056TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: dvm:DvMF_0498 30S ribosomal protein S21; PFAM: Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
Dde_2057 protein networkhttps://string-db.org/network/207559.Dde_2057KEGG: dvl:Dvul_1365 hypothetical protein.
Dde_2058 protein networkhttps://string-db.org/network/207559.Dde_2058Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
rsmA protein networkhttps://string-db.org/network/207559.Dde_2059Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
Dde_2060 protein networkhttps://string-db.org/network/207559.Dde_2060Alpha,alpha-trehalose-phosphate synthase (UDP-forming); KEGG: dpr:Despr_1891 trehalose 6-phosphate synthase; PFAM: Glycosyl transferase, family 20.
Dde_2061 protein networkhttps://string-db.org/network/207559.Dde_2061Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
Dde_2062 protein networkhttps://string-db.org/network/207559.Dde_2062PFAM: Protein of unknown function DUF2062; KEGG: dvl:Dvul_1362 hypothetical protein.
Dde_2063 protein networkhttps://string-db.org/network/207559.Dde_2063TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation fa [...]
Dde_2064 protein networkhttps://string-db.org/network/207559.Dde_2064KEGG: das:Daes_1821 hypothetical protein.
bamD protein networkhttps://string-db.org/network/207559.Dde_2065Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
Dde_2066 protein networkhttps://string-db.org/network/207559.Dde_2066TIGRFAM: Thioredoxin reductase; KEGG: dvl:Dvul_1324 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
Dde_2067 protein networkhttps://string-db.org/network/207559.Dde_2067Thioredoxin; KEGG: dvm:DvMF_0402 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
tsaD protein networkhttps://string-db.org/network/207559.Dde_2068Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is invo [...]
fbp protein networkhttps://string-db.org/network/207559.Dde_2069Fructose-bisphosphatase; KEGG: dvl:Dvul_1321 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase.
Dde_2070 protein networkhttps://string-db.org/network/207559.Dde_2070Sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; KEGG: dvm:DvMF_0405 hypothetical protein.
Dde_2071 protein networkhttps://string-db.org/network/207559.Dde_2071KEGG: dvl:Dvul_1319 hypothetical protein.
Dde_2072 protein networkhttps://string-db.org/network/207559.Dde_2072Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins [...]
Dde_2073 protein networkhttps://string-db.org/network/207559.Dde_2073KEGG: dvm:DvMF_0408 hypothetical protein.
Dde_2074 protein networkhttps://string-db.org/network/207559.Dde_2074KEGG: dvl:Dvul_1316 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyl [...]
Dde_2075 protein networkhttps://string-db.org/network/207559.Dde_2075ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Dde_2076 protein networkhttps://string-db.org/network/207559.Dde_2076Hypothetical protein; KEGG: dvm:DvMF_0411 SNARE associated Golgi protein.
pcm protein networkhttps://string-db.org/network/207559.Dde_2077protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl [...]
Dde_2078 protein networkhttps://string-db.org/network/207559.Dde_2078KEGG: dvm:DvMF_0413 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
Dde_2079 protein networkhttps://string-db.org/network/207559.Dde_2079PFAM: Peptidase M23; KEGG: dvu:DVU1851 M24/M37 family peptidase.
Dde_2080 protein networkhttps://string-db.org/network/207559.Dde_2080Pyruvate, water dikinase., Phosphoenolpyruvate--protein phosphotransferase; KEGG: dvm:DvMF_0416 pyruvate phosphate dikinase PEP/pyruvate-binding; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-b [...]
Dde_2081 protein networkhttps://string-db.org/network/207559.Dde_2081Pyruvate carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Pyruvate carboxyltransferase; Biotin carboxylase, C-terminal; Carbamoyl phosphate synthase, large subunit, [...]
Dde_2082 protein networkhttps://string-db.org/network/207559.Dde_2082KEGG: dvm:DvMF_0418 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase.
Dde_2083 protein networkhttps://string-db.org/network/207559.Dde_2083PFAM: Polynucleotide adenylyltransferase region; KEGG: dvl:Dvul_1326 polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
Dde_2084 protein networkhttps://string-db.org/network/207559.Dde_2084Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
Dde_2085 protein networkhttps://string-db.org/network/207559.Dde_2085PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_1520 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_2086 protein networkhttps://string-db.org/network/207559.Dde_2086KEGG: dvl:Dvul_1521 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
Dde_2088 protein networkhttps://string-db.org/network/207559.Dde_2088PFAM: Amino acid-binding ACT; KEGG: dvl:Dvul_1522 amino acid-binding ACT domain-containing protein.
rtcB protein networkhttps://string-db.org/network/207559.Dde_2089Protein of unknown function UPF0027; PFAM: Uncharacterized protein family UPF0027; KEGG: avn:Avin_46150 hypothetical protein; Belongs to the RtcB family.
Dde_2090 protein networkhttps://string-db.org/network/207559.Dde_2090PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; KEGG: dvl:Dvul_1523 molybdopterin oxidoreductase; Belongs to the prokaryot [...]
nadE protein networkhttps://string-db.org/network/207559.Dde_2091NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
dapB protein networkhttps://string-db.org/network/207559.Dde_2092Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
ligA protein networkhttps://string-db.org/network/207559.Dde_2093DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy sourc [...]
Dde_2094 protein networkhttps://string-db.org/network/207559.Dde_2094KEGG: dvm:DvMF_0452 hypothetical protein.
Dde_2095 protein networkhttps://string-db.org/network/207559.Dde_2095TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; Ion transport 2; KEGG: dvm:DvMF_0453 TrkA-N domain protein.
uvrB protein networkhttps://string-db.org/network/207559.Dde_2096Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...]
Dde_2097 protein networkhttps://string-db.org/network/207559.Dde_2097KEGG: dvl:Dvul_1530 hypothetical protein.
aat protein networkhttps://string-db.org/network/207559.Dde_2098leucyl/phenylalanyl-tRNA/protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-ter [...]
Dde_2099 protein networkhttps://string-db.org/network/207559.Dde_2099TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEG [...]
clpS protein networkhttps://string-db.org/network/207559.Dde_2100ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
Dde_2101 protein networkhttps://string-db.org/network/207559.Dde_2101PFAM: Adenylate cyclase; KEGG: dvl:Dvul_1534 adenylate cyclase.
crcB protein networkhttps://string-db.org/network/207559.Dde_2102CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
Dde_2103 protein networkhttps://string-db.org/network/207559.Dde_2103PFAM: Protein of unknown function DUF190; KEGG: nwa:Nwat_2116 hypothetical protein.
cheB2 protein networkhttps://string-db.org/network/207559.Dde_2104Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Cataly [...]
Dde_2105 protein networkhttps://string-db.org/network/207559.Dde_2105MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
Dde_2106 protein networkhttps://string-db.org/network/207559.Dde_2106CheA signal transduction histidine kinase; KEGG: dvu:DVU1594 chemotaxis protein CheA; PFAM: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, hom [...]
Dde_2107 protein networkhttps://string-db.org/network/207559.Dde_2107KEGG: dvl:Dvul_1541 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_2108 protein networkhttps://string-db.org/network/207559.Dde_2108KEGG: dvm:DvMF_0469 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling.
radA protein networkhttps://string-db.org/network/207559.Dde_2110DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
Dde_2111 protein networkhttps://string-db.org/network/207559.Dde_2111MJ0042 family finger-like protein; TIGRFAM: Zinc finger/thioredoxin putative; KEGG: dvl:Dvul_1544 zinc finger-domain-containing protein.
Dde_2112 protein networkhttps://string-db.org/network/207559.Dde_2112TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: dvl:Dvul_1545 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltrans [...]
Dde_2113 protein networkhttps://string-db.org/network/207559.Dde_2113PFAM: GCN5-related N-acetyltransferase; KEGG: dvm:DvMF_0474 acetyltransferase; Belongs to the acetyltransferase family.
Dde_2114 protein networkhttps://string-db.org/network/207559.Dde_2114PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvm:DvMF_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
Dde_2115 protein networkhttps://string-db.org/network/207559.Dde_2115Methionine synthase; KEGG: dvm:DvMF_0476 homocysteine S-methyltransferase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-bin [...]
Dde_2116 protein networkhttps://string-db.org/network/207559.Dde_2116Putative RNA polymerase, sigma 70 family subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
Dde_2117 protein networkhttps://string-db.org/network/207559.Dde_2117Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; KEGG: dvm:DvMF_0478 tetratricopeptide TPR_2 repeat protein.
Dde_2118 protein networkhttps://string-db.org/network/207559.Dde_2118KEGG: dvl:Dvul_1551 hypothetical protein.
Dde_2119 protein networkhttps://string-db.org/network/207559.Dde_2119Hypothetical protein.
Dde_2120 protein networkhttps://string-db.org/network/207559.Dde_2120TIGRFAM: Ribose 5-phosphate isomerase B; Ribose/galactose isomerase; KEGG: dvl:Dvul_1553 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase.
cysS protein networkhttps://string-db.org/network/207559.Dde_2121SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: dvl:Dvul_1554 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-termina [...]
Dde_2122 protein networkhttps://string-db.org/network/207559.Dde_2122KEGG: dvm:DvMF_0483 peptidase M48 Ste24p; PFAM: Peptidase M48, Ste24p; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
Dde_2123 protein networkhttps://string-db.org/network/207559.Dde_2123KEGG: drt:Dret_0554 Appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing.
hslV protein networkhttps://string-db.org/network/207559.Dde_212420S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
ispE protein networkhttps://string-db.org/network/207559.Dde_21254-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
prs protein networkhttps://string-db.org/network/207559.Dde_2126Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
rplY protein networkhttps://string-db.org/network/207559.Dde_2127Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacteria [...]
pth protein networkhttps://string-db.org/network/207559.Dde_2128peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
Dde_2129 protein networkhttps://string-db.org/network/207559.Dde_2129PFAM: Transcription factor CarD; KEGG: dvm:DvMF_0490 transcriptional regulator, CarD family.
rho protein networkhttps://string-db.org/network/207559.Dde_2130Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
Dde_2134 protein networkhttps://string-db.org/network/207559.Dde_2134TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: dvl:Dvul_1249 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase- [...]
Dde_2135 protein networkhttps://string-db.org/network/207559.Dde_2135Periplasmic (NiFeSe) hydrogenase, large subunit, selenocysteine-containing; KEGG: dvm:DvMF_0273 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit.
Dde_2136 protein networkhttps://string-db.org/network/207559.Dde_2136KEGG: dvm:DvMF_0272 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein.
Dde_2137 protein networkhttps://string-db.org/network/207559.Dde_2137Periplasmic (NiFe) hydrogenase, small subunit, isozyme 1; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: dvl:Dvul_1246 hydrogenase (NiFe) [...]
Dde_2138 protein networkhttps://string-db.org/network/207559.Dde_2138KEGG: dvl:Dvul_1245 nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
Dde_2139 protein networkhttps://string-db.org/network/207559.Dde_2139KEGG: dvl:Dvul_1244 hydrogenase expression/formation protein; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrog [...]
Dde_2140 protein networkhttps://string-db.org/network/207559.Dde_2140KEGG: dvl:Dvul_1243 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC.
Dde_2141 protein networkhttps://string-db.org/network/207559.Dde_2141PFAM: Lipase, GDSL; KEGG: dvm:DvMF_0267 lipolytic protein G-D-S-L family.
ileS protein networkhttps://string-db.org/network/207559.Dde_2142isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
lspA protein networkhttps://string-db.org/network/207559.Dde_2143Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
Dde_2144 protein networkhttps://string-db.org/network/207559.Dde_2144Hypothetical protein.
cpoB-2 protein networkhttps://string-db.org/network/207559.Dde_2145Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
Dde_2146 protein networkhttps://string-db.org/network/207559.Dde_2146NIL domain-containing protein; PFAM: NIL domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_1236 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_2147 protein networkhttps://string-db.org/network/207559.Dde_2147PFAM: Type IV pilus assembly PilZ; KEGG: dma:DMR_22220 hypothetical protein.
Dde_2148 protein networkhttps://string-db.org/network/207559.Dde_2148KEGG: dvl:Dvul_1621 chemotaxis phosphatase, CheZ.
Dde_2151 protein networkhttps://string-db.org/network/207559.Dde_2151KEGG: dvl:Dvul_1622 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
Dde_2152 protein networkhttps://string-db.org/network/207559.Dde_2152KEGG: das:Daes_0573 hypothetical protein.
Dde_2153 protein networkhttps://string-db.org/network/207559.Dde_2153PFAM: MotA/TolQ/ExbB proton channel; KEGG: das:Daes_0574 MotA/TolQ/ExbB proton channel.
Dde_2154 protein networkhttps://string-db.org/network/207559.Dde_2154PFAM: MotA/TolQ/ExbB proton channel; KEGG: das:Daes_0575 MotA/TolQ/ExbB proton channel.
Dde_2155 protein networkhttps://string-db.org/network/207559.Dde_2155PFAM: Biopolymer transport protein ExbD/TolR; KEGG: das:Daes_0576 biopolymer transport protein ExbD/TolR.
Dde_2156 protein networkhttps://string-db.org/network/207559.Dde_2156TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could a [...]
Dde_2157 protein networkhttps://string-db.org/network/207559.Dde_2157PFAM: Tetratricopeptide TPR-1; KEGG: dsa:Desal_2086 hypothetical protein.
Dde_2159 protein networkhttps://string-db.org/network/207559.Dde_2159KEGG: dvm:DvMF_2542 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_2160 protein networkhttps://string-db.org/network/207559.Dde_2160PFAM: Protein of unknown function DUF1499; KEGG: dal:Dalk_4690 hypothetical protein.
Dde_2161 protein networkhttps://string-db.org/network/207559.Dde_2161PFAM: Peptidase M48, Ste24p; KEGG: tgr:Tgr7_1109 peptidase M48 Ste24p.
Dde_2162 protein networkhttps://string-db.org/network/207559.Dde_2162KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE.
Dde_2164 protein networkhttps://string-db.org/network/207559.Dde_2164PFAM: Acylphosphatase-like; KEGG: dsa:Desal_0646 acylphosphatase.
Dde_2165 protein networkhttps://string-db.org/network/207559.Dde_2165KEGG: dvl:Dvul_1689 hypothetical protein.
ilvC protein networkhttps://string-db.org/network/207559.Dde_2166Ketol-acid reductoisomerase / Dehydropantoate reductase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)- [...]
Dde_2167 protein networkhttps://string-db.org/network/207559.Dde_2167KEGG: dvm:DvMF_0154 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT.
Dde_2168 protein networkhttps://string-db.org/network/207559.Dde_2168TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: dvm:DvMF_0153 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP bindi [...]
Dde_2169 protein networkhttps://string-db.org/network/207559.Dde_2169KEGG: dvl:Dvul_1693 hypothetical protein.
Dde_2170 protein networkhttps://string-db.org/network/207559.Dde_2170PFAM: Protein of unknown function DUF167; KEGG: dsa:Desal_2400 hypothetical protein; Belongs to the UPF0235 family.
Dde_2171 protein networkhttps://string-db.org/network/207559.Dde_2171KEGG: dvl:Dvul_1695 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA.
Dde_2172 protein networkhttps://string-db.org/network/207559.Dde_2172PFAM: Protein of unknown function YGGT; KEGG: dvm:DvMF_0149 protein of unknown function YGGT.
Dde_2173 protein networkhttps://string-db.org/network/207559.Dde_2173KEGG: dvl:Dvul_1697 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase.
Dde_2174 protein networkhttps://string-db.org/network/207559.Dde_2174KEGG: dvm:DvMF_0147 hypothetical protein.
Dde_2175 protein networkhttps://string-db.org/network/207559.Dde_2175KEGG: dvm:DvMF_0146 hypothetical protein.
Dde_2176 protein networkhttps://string-db.org/network/207559.Dde_2176KEGG: dvu:DVU1368 rhodanese-like domain-containing protein; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SMART: Rhodanese-like.
tatA protein networkhttps://string-db.org/network/207559.Dde_2177Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
Dde_2178 protein networkhttps://string-db.org/network/207559.Dde_2178KEGG: dvm:DvMF_0143 putative lipoprotein.
Dde_2179 protein networkhttps://string-db.org/network/207559.Dde_2179Hypothetical protein; KEGG: dol:Dole_0037 TPR repeat-containing protein.
Dde_2180 protein networkhttps://string-db.org/network/207559.Dde_2180KEGG: dol:Dole_0036 hypothetical protein.
Dde_2181 protein networkhttps://string-db.org/network/207559.Dde_2181Anaerobic cobalt chelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.
Dde_2182 protein networkhttps://string-db.org/network/207559.Dde_2182TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. d [...]
Dde_2183 protein networkhttps://string-db.org/network/207559.Dde_2183dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
Dde_2184 protein networkhttps://string-db.org/network/207559.Dde_2184KEGG: dvm:DvMF_0139 nucleoside recognition domain protein.
Dde_2185 protein networkhttps://string-db.org/network/207559.Dde_2185lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
Dde_2187 protein networkhttps://string-db.org/network/207559.Dde_2187TIGRFAM: UDP-glucose 4-epimerase; KEGG: dvu:DVU1360 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
Dde_2188 protein networkhttps://string-db.org/network/207559.Dde_2188KEGG: dvm:DvMF_0136 hypothetical protein.
Dde_2189 protein networkhttps://string-db.org/network/207559.Dde_2189KEGG: mem:Memar_0387 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
Dde_2190 protein networkhttps://string-db.org/network/207559.Dde_2190KEGG: dsa:Desal_3779 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Hal [...]
Dde_2191 protein networkhttps://string-db.org/network/207559.Dde_2191PFAM: Methyltransferase type 11; KEGG: dvm:DvMF_0133 methyltransferase type 11.
Dde_2192 protein networkhttps://string-db.org/network/207559.Dde_2192KEGG: dal:Dalk_3407 aspartate aminotransferase; PFAM: Aminotransferase, class I/II.
Dde_2193 protein networkhttps://string-db.org/network/207559.Dde_2193KEGG: dvl:Dvul_1712 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_2194 protein networkhttps://string-db.org/network/207559.Dde_2194KEGG: dvl:Dvul_1713 hypothetical protein.
Dde_2196 protein networkhttps://string-db.org/network/207559.Dde_2196DNA polymerase III, alpha subunit; SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dvm:DvMF_0130 DNA polymerase III, alpha subunit; PFAM: B [...]
Dde_2197 protein networkhttps://string-db.org/network/207559.Dde_2197Queuosine biosynthesis protein QueD; KEGG: dvm:DvMF_0129 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropt [...]
Dde_2198 protein networkhttps://string-db.org/network/207559.Dde_2198KEGG: dvl:Dvul_1717 multiple antibiotic resistance (MarC)-related proteins; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related.
Dde_2199 protein networkhttps://string-db.org/network/207559.Dde_2199PFAM: Nitroreductase-like; KEGG: dvu:DVU3136 nitroreductase family protein.
dxs protein networkhttps://string-db.org/network/207559.Dde_2200Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); [...]
Dde_2201 protein networkhttps://string-db.org/network/207559.Dde_2201PFAM: Polyprenyl synthetase; KEGG: dvl:Dvul_1719 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
xseB protein networkhttps://string-db.org/network/207559.Dde_2202Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; [...]
Dde_2203 protein networkhttps://string-db.org/network/207559.Dde_2203PFAM: Peptidase M23; KEGG: dvm:DvMF_0123 peptidase M23.
xseA protein networkhttps://string-db.org/network/207559.Dde_2204Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
proS protein networkhttps://string-db.org/network/207559.Dde_2206prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
ispG protein networkhttps://string-db.org/network/207559.Dde_22071-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG [...]
Dde_2208 protein networkhttps://string-db.org/network/207559.Dde_2208PFAM: ABC transporter metal-binding lipoprotein; KEGG: das:Daes_1016 periplasmic solute-binding protein.
Dde_2209 protein networkhttps://string-db.org/network/207559.Dde_2209ATPase component of zinc ABC transporter; PFAM: ABC transporter-like; KEGG: dvm:DvMF_0118 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_2210 protein networkhttps://string-db.org/network/207559.Dde_2210Permease component of zinc ABC transporter; PFAM: ABC-3; KEGG: dvm:DvMF_0117 ABC-3 protein.
Dde_2211 protein networkhttps://string-db.org/network/207559.Dde_2211PFAM: Ferric-uptake regulator; KEGG: dvm:DvMF_0116 ferric uptake regulator, Fur family; Belongs to the Fur family.
Dde_2212 protein networkhttps://string-db.org/network/207559.Dde_2212KEGG: dvm:DvMF_0115 hypothetical protein.
Dde_2213 protein networkhttps://string-db.org/network/207559.Dde_2213KEGG: dvm:DvMF_0113 hypothetical protein.
Dde_2214 protein networkhttps://string-db.org/network/207559.Dde_2214KEGG: das:Daes_2902 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
Dde_2215 protein networkhttps://string-db.org/network/207559.Dde_2215PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: das:Daes_2901 tripartite ATP-independent periplasmic transporter DctQ component.
Dde_2216 protein networkhttps://string-db.org/network/207559.Dde_2216TRAP-type C4-dicarboxylate transport system, periplasmic component, DctP; PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dba:Dbac_1708 TRAP dicarboxylate transporter-DctP s [...]
Dde_2217 protein networkhttps://string-db.org/network/207559.Dde_2217Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dba:Dbac_1709 transcriptional regulator, TetR family.
lon protein networkhttps://string-db.org/network/207559.Dde_2218Anti-sigma H sporulation factor, LonB; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. R [...]
clpX protein networkhttps://string-db.org/network/207559.Dde_2219ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/207559.Dde_2220ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the d [...]
tig protein networkhttps://string-db.org/network/207559.Dde_2222Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
Dde_2225 protein networkhttps://string-db.org/network/207559.Dde_2225KEGG: dsa:Desal_0640 selenide, water dikinase; TIGRFAM: Selenide water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal.
Dde_2226 protein networkhttps://string-db.org/network/207559.Dde_2226PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dvm:DvMF_0108 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
rplQ protein networkhttps://string-db.org/network/207559.Dde_2230KEGG: das:Daes_2227 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17.
rpoA protein networkhttps://string-db.org/network/207559.Dde_2231DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsD protein networkhttps://string-db.org/network/207559.Dde_2232Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/207559.Dde_223330S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsM protein networkhttps://string-db.org/network/207559.Dde_223430S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpmJ protein networkhttps://string-db.org/network/207559.Dde_2235KEGG: dsa:Desal_1207 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; PFAM: Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
map protein networkhttps://string-db.org/network/207559.Dde_2236Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
secY protein networkhttps://string-db.org/network/207559.Dde_2237Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...]
rplO protein networkhttps://string-db.org/network/207559.Dde_2238Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpmD protein networkhttps://string-db.org/network/207559.Dde_2239KEGG: dvm:DvMF_0097 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region.
rpsE protein networkhttps://string-db.org/network/207559.Dde_2240Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
rplR protein networkhttps://string-db.org/network/207559.Dde_2241Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
rplF protein networkhttps://string-db.org/network/207559.Dde_2242Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...]
rpsH protein networkhttps://string-db.org/network/207559.Dde_2243Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...]
rpsZ protein networkhttps://string-db.org/network/207559.Dde_2244Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
rplE protein networkhttps://string-db.org/network/207559.Dde_2245Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...]
rplX protein networkhttps://string-db.org/network/207559.Dde_2246Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplN protein networkhttps://string-db.org/network/207559.Dde_2247Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/207559.Dde_224830S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/207559.Dde_2249KEGG: dvm:DvMF_0087 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/207559.Dde_2250Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/207559.Dde_2251Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/207559.Dde_2252Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S as [...]
rpsS protein networkhttps://string-db.org/network/207559.Dde_2253Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/207559.Dde_2254Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...]
rplW protein networkhttps://string-db.org/network/207559.Dde_2255Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplD protein networkhttps://string-db.org/network/207559.Dde_2256Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes [...]
rplC protein networkhttps://string-db.org/network/207559.Dde_225750S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rpsJ protein networkhttps://string-db.org/network/207559.Dde_225830S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
fusA protein networkhttps://string-db.org/network/207559.Dde_2261Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/207559.Dde_2262Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...]
rpsL protein networkhttps://string-db.org/network/207559.Dde_2263Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
Dde_2265 protein networkhttps://string-db.org/network/207559.Dde_2265TIGRFAM: Sulphate adenylyltransferase; KEGG: dvm:DvMF_0074 sulfate adenylyltransferase; PFAM: Sulphate adenylyltransferase.
Dde_2267 protein networkhttps://string-db.org/network/207559.Dde_2267PFAM: Protein of unknown function DUF45; KEGG: das:Daes_3063 hypothetical protein.
Dde_2268 protein networkhttps://string-db.org/network/207559.Dde_2268KEGG: dvm:DvMF_0072 hypothetical protein.
Dde_2270 protein networkhttps://string-db.org/network/207559.Dde_2270KEGG: dvm:DvMF_0071 hypothetical protein.
Dde_2271 protein networkhttps://string-db.org/network/207559.Dde_2271Inner membrane protein binds 2 heme b; PFAM: Nitrate reductase, gamma subunit; KEGG: dvm:DvMF_0070 nitrate reductase gamma subunit.
Dde_2272 protein networkhttps://string-db.org/network/207559.Dde_2272Cytoplasmic, binds 2 (4Fe-4S); KEGG: dvl:Dvul_1776 reductase, iron-sulfur binding subunit.
Dde_2273 protein networkhttps://string-db.org/network/207559.Dde_2273Periplasmic (Sec) triheme cytochrome c; KEGG: dvm:DvMF_0068 cytochrome c family protein.
Dde_2274 protein networkhttps://string-db.org/network/207559.Dde_2274Periplasmic (Tat), binds 2(4Fe-4S); PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_0067 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Dde_2275 protein networkhttps://string-db.org/network/207559.Dde_2275Integral membrane protein; PFAM: Polysulphide reductase, NrfD; KEGG: dvu:DVU1286 reductase, transmembrane subunit.
Dde_2276 protein networkhttps://string-db.org/network/207559.Dde_2276KEGG: dsa:Desal_1339 small GTP-binding protein; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related.
Dde_2277 protein networkhttps://string-db.org/network/207559.Dde_2277Radical SAM domain protein; KEGG: dsa:Desal_0368 biotin synthase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_2278 protein networkhttps://string-db.org/network/207559.Dde_2278KEGG: dsa:Desal_0367 thiamine biosynthesis protein ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SMART: Biotin/thiamin synthesis-associated protein.
Dde_2279 protein networkhttps://string-db.org/network/207559.Dde_2279KEGG: das:Daes_0597 transcriptional regulator.
Dde_2280 protein networkhttps://string-db.org/network/207559.Dde_2280KEGG: das:Daes_0598 iron hydrogenase small subunit; PFAM: Iron hydrogenase, small subunit-like; SMART: Iron hydrogenase, small subunit-like.
Dde_2281 protein networkhttps://string-db.org/network/207559.Dde_2281TIGRFAM: Iron hydrogenase, subset; KEGG: das:Daes_0599 hydrogenase, Fe-only; PFAM: Iron hydrogenase, large subunit, C-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
Dde_2282 protein networkhttps://string-db.org/network/207559.Dde_2282PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: dvu:DVU2240 hydantoinase/oxoprolinase family protein.
Dde_2283 protein networkhttps://string-db.org/network/207559.Dde_22834-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: dvm:DvMF_0837 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal [...]
Dde_2284 protein networkhttps://string-db.org/network/207559.Dde_2284Asparaginase; KEGG: dvl:Dvul_1000 peptidase T2, asparaginase 2; PFAM: Peptidase T2, asparaginase 2.
glgB protein networkhttps://string-db.org/network/207559.Dde_22851,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains [...]
glgA protein networkhttps://string-db.org/network/207559.Dde_2286Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
Dde_2287 protein networkhttps://string-db.org/network/207559.Dde_2287PFAM: NUDIX hydrolase domain; KEGG: dsa:Desal_2793 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
Dde_2289 protein networkhttps://string-db.org/network/207559.Dde_2289KEGG: dvm:DvMF_0844 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Belongs to the SUA5 family.
rlmH protein networkhttps://string-db.org/network/207559.Dde_2291SPOUT methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
Dde_2292 protein networkhttps://string-db.org/network/207559.Dde_2292KEGG: dvl:Dvul_1811 hypothetical protein.
rsmG protein networkhttps://string-db.org/network/207559.Dde_2293Glucose inhibited division protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
Dde_2294 protein networkhttps://string-db.org/network/207559.Dde_2294(Acyl-carrier-protein) S-malonyltransferase; KEGG: dvl:Dvul_1813 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
argS protein networkhttps://string-db.org/network/207559.Dde_2295TIGRFAM: Arginyl-tRNA synthetase, class Ic; KEGG: dvm:DvMF_0850 arginyl-tRNA synthetase.
Dde_2296 protein networkhttps://string-db.org/network/207559.Dde_2296Sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; KEGG: drt:Dret_1315 sporulation domain-containing protein.
Dde_2297 protein networkhttps://string-db.org/network/207559.Dde_2297KEGG: dvu:DVU1246 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140.
Dde_2298 protein networkhttps://string-db.org/network/207559.Dde_2298Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_0853 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_2299 protein networkhttps://string-db.org/network/207559.Dde_2299PFAM: Mammalian cell entry related; KEGG: dvm:DvMF_0854 mammalian cell entry related domain protein.
Dde_2300 protein networkhttps://string-db.org/network/207559.Dde_2300PFAM: Toluene tolerance; KEGG: dvm:DvMF_0855 toluene tolerance family protein.
Dde_2301 protein networkhttps://string-db.org/network/207559.Dde_2301PFAM: VacJ-like lipoprotein; KEGG: dvu:DVU1242 VacJ lipoprotein.
Dde_2303 protein networkhttps://string-db.org/network/207559.Dde_2303PFAM: Cupin 2, conserved barrel; KEGG: dma:DMR_35390 hypothetical protein.
Dde_2304 protein networkhttps://string-db.org/network/207559.Dde_2304KEGG: dvm:DvMF_0858 hypothetical protein.
Dde_2305 protein networkhttps://string-db.org/network/207559.Dde_2305PFAM: Protein of unknown function DUF340, prokaryotic membrane; KEGG: dvl:Dvul_1823 hypothetical protein.
Dde_2306 protein networkhttps://string-db.org/network/207559.Dde_2306ABC-type transporter, periplasmic subunit family 3; KEGG: dvl:Dvul_1824 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-bin [...]
Dde_2307 protein networkhttps://string-db.org/network/207559.Dde_2307KEGG: dvm:DvMF_0861 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
Dde_2308 protein networkhttps://string-db.org/network/207559.Dde_2308Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvl:Dvul_1826 amino acid ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
glnD protein networkhttps://string-db.org/network/207559.Dde_2309UTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD sense [...]
Dde_2310 protein networkhttps://string-db.org/network/207559.Dde_2310PFAM: Nitrogen regulatory protein PII; KEGG: dvl:Dvul_1830 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
Dde_2311 protein networkhttps://string-db.org/network/207559.Dde_2311KEGG: dvm:DvMF_0866 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter.
tpx protein networkhttps://string-db.org/network/207559.Dde_2313Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection [...]
Dde_2314 protein networkhttps://string-db.org/network/207559.Dde_2314KEGG: dvu:DVU1225 hypothetical protein.
Dde_2315 protein networkhttps://string-db.org/network/207559.Dde_2315KEGG: dvm:DvMF_0869 hypothetical protein.
Dde_2316 protein networkhttps://string-db.org/network/207559.Dde_2316PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: dvu:DVU2246 S1 RNA-binding domain-containing protein.
Dde_2317 protein networkhttps://string-db.org/network/207559.Dde_2317Butyrate--CoA ligase; KEGG: dvl:Dvul_0993 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
Dde_2318 protein networkhttps://string-db.org/network/207559.Dde_2318Cupin 2 conserved barrel domain protein; KEGG: dvm:DvMF_0002 transcriptional regulator, XRE family; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
dnaA protein networkhttps://string-db.org/network/207559.Dde_2320Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
thyX protein networkhttps://string-db.org/network/207559.Dde_2321Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylene [...]
ruvB protein networkhttps://string-db.org/network/207559.Dde_2322Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvA protein networkhttps://string-db.org/network/207559.Dde_2323Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvC protein networkhttps://string-db.org/network/207559.Dde_2324Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
Dde_2325 protein networkhttps://string-db.org/network/207559.Dde_2325Protein of unknown function DUF28; KEGG: dvm:DvMF_3201 hypothetical protein; TIGRFAM: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28.
rlmE protein networkhttps://string-db.org/network/207559.Dde_2326Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
Dde_2327 protein networkhttps://string-db.org/network/207559.Dde_2327KEGG: dvm:DvMF_3199 hypothetical protein.
metE protein networkhttps://string-db.org/network/207559.Dde_23285- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; [...]
Dde_2330 protein networkhttps://string-db.org/network/207559.Dde_2330PFAM: Methyltransferase type 11; KEGG: dol:Dole_1540 methyltransferase type 11.
Dde_2331 protein networkhttps://string-db.org/network/207559.Dde_2331TIGRFAM: Indolepyruvate/phenylpyruvate decarboxylase; KEGG: dvm:DvMF_0027 indolepyruvate/phenylpyruvate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine [...]
sucD protein networkhttps://string-db.org/network/207559.Dde_2334Succinyl-CoA synthetase, alpha/beta subunit (sucCD); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GT [...]
Dde_2335 protein networkhttps://string-db.org/network/207559.Dde_2335PFAM: Protein of unknown function DUF1121; KEGG: dvu:DVU2138 hypothetical protein.
Dde_2336 protein networkhttps://string-db.org/network/207559.Dde_2336KEGG: psl:Psta_3109 hypothetical protein.
Dde_2337 protein networkhttps://string-db.org/network/207559.Dde_2337PFAM: Histone deacetylase superfamily; KEGG: dvm:DvMF_0024 histone deacetylase superfamily.
tmk protein networkhttps://string-db.org/network/207559.Dde_2338Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
Dde_2339 protein networkhttps://string-db.org/network/207559.Dde_2339TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: dvl:Dvul_1091 metal dependent phosphohydrolase; SMART: Metal- [...]
surE protein networkhttps://string-db.org/network/207559.Dde_2340Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
Dde_2341 protein networkhttps://string-db.org/network/207559.Dde_2341TIGRFAM: Fructose-1,6-bisphosphate aldolase, class II; Ketose-bisphosphate aldolase, class-II; KEGG: dvl:Dvul_1089 fructose-1,6-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase [...]
Dde_2342 protein networkhttps://string-db.org/network/207559.Dde_2342SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dvu:DVU2144 glyceraldehyde 3-phosphate dehydrogenase; PFAM [...]
Dde_2343 protein networkhttps://string-db.org/network/207559.Dde_2343KEGG: dvm:DvMF_0010 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted.
Dde_2344 protein networkhttps://string-db.org/network/207559.Dde_2344PFAM: Protein of unknown function DUF814; Fibronectin-binding A, N-terminal; KEGG: dvm:DvMF_0009 protein of unknown function DUF814.
dksA protein networkhttps://string-db.org/network/207559.Dde_2345Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regu [...]
Dde_2347 protein networkhttps://string-db.org/network/207559.Dde_2347Hypothetical protein.
Dde_2348 protein networkhttps://string-db.org/network/207559.Dde_2348KEGG: dvm:DvMF_0004 protein of unknown function DUF181; TIGRFAM: YcaO-like; PFAM: YcaO-like; Tetratricopeptide TPR-1.
Dde_2349 protein networkhttps://string-db.org/network/207559.Dde_2349Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: atu:Atu2320 TetR family transcriptional regulator.
Dde_2350 protein networkhttps://string-db.org/network/207559.Dde_2350PFAM: Small multidrug resistance protein; KEGG: atu:Atu2319 quaternary ammonium compound-resistance protein.
Dde_2351 protein networkhttps://string-db.org/network/207559.Dde_2351KEGG: dvm:DvMF_0871 hypothetical protein.
Dde_2352 protein networkhttps://string-db.org/network/207559.Dde_2352KEGG: dvm:DvMF_0872 hypothetical protein.
Dde_2353 protein networkhttps://string-db.org/network/207559.Dde_2353Trehalose synthase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; KEGG: tro:trd_1931 alpha amylase, catalytic subdomain [...]
Dde_2354 protein networkhttps://string-db.org/network/207559.Dde_2354PFAM: Staphylococcal nuclease (SNase-like); KEGG: dvm:DvMF_0873 nuclease (SNase domain protein).
Dde_2355 protein networkhttps://string-db.org/network/207559.Dde_2355Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: dvu:DVU2114 sigma-54 dependent transcriptional regulator/response regulator; PFAM: RNA polymerase sigma factor 54, in [...]
Dde_2357 protein networkhttps://string-db.org/network/207559.Dde_2357PFAM: Flp/Fap pilin component; KEGG: dvl:Dvul_1115 Flp/Fap pilin component.
Dde_2358 protein networkhttps://string-db.org/network/207559.Dde_2358PFAM: Peptidase A24A, prepilin type IV; KEGG: dvl:Dvul_1114 peptidase A24A, prepilin type IV.
Dde_2359 protein networkhttps://string-db.org/network/207559.Dde_2359TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain; KEGG: dvm:DvMF_2742 Flp pilus assembly protein CpaB; SMART: SAF domain.
Dde_2360 protein networkhttps://string-db.org/network/207559.Dde_2360PFAM: Type II/III secretion system; Transport-associated; KEGG: dvm:DvMF_2741 type II and III secretion system protein; Belongs to the bacterial secretin family.
Dde_2361 protein networkhttps://string-db.org/network/207559.Dde_2361Hypothetical protein.
Dde_2362 protein networkhttps://string-db.org/network/207559.Dde_2362KEGG: dvm:DvMF_2739 response regulator receiver protein.
Dde_2363 protein networkhttps://string-db.org/network/207559.Dde_2363PFAM: Type II secretion system protein E; KEGG: dvm:DvMF_2738 type II secretion system protein E.
Dde_2364 protein networkhttps://string-db.org/network/207559.Dde_2364PFAM: Type II secretion system F domain; KEGG: dvm:DvMF_2737 type II secretion system protein.
Dde_2365 protein networkhttps://string-db.org/network/207559.Dde_2365PFAM: Type II secretion system F domain; KEGG: dvm:DvMF_2736 type II secretion system protein.
Dde_2366 protein networkhttps://string-db.org/network/207559.Dde_2366Sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; Tetratricopeptide TPR-1; KEGG: dvm:DvMF_2735 TPR repeat-containing protein.
Dde_2367 protein networkhttps://string-db.org/network/207559.Dde_2367TadE family protein; PFAM: TadE-like; KEGG: dvm:DvMF_2734 TadE family protein.
Dde_2368 protein networkhttps://string-db.org/network/207559.Dde_2368KEGG: dvm:DvMF_2733 von Willebrand factor type A; PFAM: Protein of unknown function DUF2134, membrane; von Willebrand factor, type A; SMART: von Willebrand factor, type A.
Dde_2369 protein networkhttps://string-db.org/network/207559.Dde_2369TadE family protein; PFAM: TadE-like; KEGG: dvl:Dvul_1103 TadE family protein.
Dde_2370 protein networkhttps://string-db.org/network/207559.Dde_2370PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS [...]
Dde_2371 protein networkhttps://string-db.org/network/207559.Dde_2371PFAM: Sodium:neurotransmitter symporter; KEGG: dvm:DvMF_0874 sodium:neurotransmitter symporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
Dde_2372 protein networkhttps://string-db.org/network/207559.Dde_2372KEGG: dvl:Dvul_1904 thiamine biosynthesis protein.
recA protein networkhttps://string-db.org/network/207559.Dde_2373recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
alaS protein networkhttps://string-db.org/network/207559.Dde_2374alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
Dde_2375 protein networkhttps://string-db.org/network/207559.Dde_2375KEGG: dvm:DvMF_1328 heavy metal-binding domain-containing protein.
Dde_2377 protein networkhttps://string-db.org/network/207559.Dde_2377Hypothetical protein.
miaB protein networkhttps://string-db.org/network/207559.Dde_2378RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at [...]
Dde_2379 protein networkhttps://string-db.org/network/207559.Dde_2379PFAM: Protein of unknown function DUF151; KEGG: dvl:Dvul_2005 hypothetical protein.
Dde_2380 protein networkhttps://string-db.org/network/207559.Dde_2380KEGG: dvm:DvMF_1332 hypothetical protein.
Dde_2381 protein networkhttps://string-db.org/network/207559.Dde_2381PFAM: Acriflavin resistance protein; KEGG: dsa:Desal_1096 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Dde_2382 protein networkhttps://string-db.org/network/207559.Dde_2382KEGG: dvl:Dvul_2011 hypothetical protein.
Dde_2384 protein networkhttps://string-db.org/network/207559.Dde_2384KEGG: dvm:DvMF_1334 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_2385 protein networkhttps://string-db.org/network/207559.Dde_2385Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
pstB protein networkhttps://string-db.org/network/207559.Dde_2386Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC tr [...]
Dde_2387 protein networkhttps://string-db.org/network/207559.Dde_2387KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal [...]
Dde_2388 protein networkhttps://string-db.org/network/207559.Dde_2388KEGG: dvl:Dvul_1912 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease.
Dde_2389 protein networkhttps://string-db.org/network/207559.Dde_2389PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_1913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_2390 protein networkhttps://string-db.org/network/207559.Dde_2390PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_0885 nitrite and sulphite reductase 4Fe-4S region.
mnmE protein networkhttps://string-db.org/network/207559.Dde_2392tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
Dde_2393 protein networkhttps://string-db.org/network/207559.Dde_2393PFAM: Single-stranded nucleic acid binding R3H; KEGG: dvm:DvMF_0887 single-stranded nucleic acid binding R3H domain protein.
yidC protein networkhttps://string-db.org/network/207559.Dde_2394Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of [...]
Dde_2395 protein networkhttps://string-db.org/network/207559.Dde_2395Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
rnpA protein networkhttps://string-db.org/network/207559.Dde_2396Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
Dde_2398 protein networkhttps://string-db.org/network/207559.Dde_2398KEGG: dvm:DvMF_0892 hypothetical protein.
Dde_2399 protein networkhttps://string-db.org/network/207559.Dde_2399KEGG: csa:Csal_2510 hypothetical protein.
Dde_2400 protein networkhttps://string-db.org/network/207559.Dde_2400Hpt domain protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region.
Dde_2401 protein networkhttps://string-db.org/network/207559.Dde_2401KEGG: dvm:DvMF_0896 hypothetical protein.
nfo protein networkhttps://string-db.org/network/207559.Dde_2402Apurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal su [...]
Dde_2403 protein networkhttps://string-db.org/network/207559.Dde_2403Hypothetical protein.
Dde_2405 protein networkhttps://string-db.org/network/207559.Dde_2405PFAM: Small multidrug resistance protein; KEGG: dvl:Dvul_0064 small multidrug resistance protein.
Dde_2406 protein networkhttps://string-db.org/network/207559.Dde_2406PFAM: Small multidrug resistance protein; KEGG: lip:LI0925 membrane transporters of cations and cationic drugs.
Dde_2408 protein networkhttps://string-db.org/network/207559.Dde_2408YcaO-domain protein; PFAM: YcaO-like; KEGG: dvm:DvMF_3119 protein of unknown function DUF181.
Dde_2409 protein networkhttps://string-db.org/network/207559.Dde_2409KEGG: dsa:Desal_3119 Na+/Ca+ antiporter, CaCA family; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region.
Dde_2410 protein networkhttps://string-db.org/network/207559.Dde_2410KEGG: dvm:DvMF_3117 hypothetical protein.
Dde_2411 protein networkhttps://string-db.org/network/207559.Dde_2411KEGG: dvm:DvMF_3116 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; HAMP linker domain; Cache; SMART: Chemotaxi [...]
Dde_2412 protein networkhttps://string-db.org/network/207559.Dde_2412PFAM: Metallophosphoesterase; KEGG: bpa:BPP1023 putative phosphoesterase.
Dde_2413 protein networkhttps://string-db.org/network/207559.Dde_2413PFAM: Nitroreductase-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_1838 nitroreductase.
Dde_2414 protein networkhttps://string-db.org/network/207559.Dde_2414KEGG: dvm:DvMF_3114 hypothetical protein.
Dde_2415 protein networkhttps://string-db.org/network/207559.Dde_2415PFAM: Protein of unknown function DUF115; KEGG: dvm:DvMF_3113 protein of unknown function DUF115.
Dde_2417 protein networkhttps://string-db.org/network/207559.Dde_2417Protein of unknown function DUF77; KEGG: dvl:Dvul_1840 hypothetical protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Protein of unknown function DUF77.
Dde_2418 protein networkhttps://string-db.org/network/207559.Dde_2418KEGG: dvl:Dvul_1841 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE.
Dde_2419 protein networkhttps://string-db.org/network/207559.Dde_2419KEGG: dvl:Dvul_1842 phosphoesterase, PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
Dde_2420 protein networkhttps://string-db.org/network/207559.Dde_2420KEGG: dvl:Dvul_1843 glycosyl transferase family protein.
Dde_2421 protein networkhttps://string-db.org/network/207559.Dde_2421Rhomboid family protein; PFAM: Peptidase S54, rhomboid; KEGG: dvm:DvMF_3108 rhomboid family protein.
Dde_2422 protein networkhttps://string-db.org/network/207559.Dde_2422PFAM: FxsA cytoplasmic membrane protein; KEGG: dvl:Dvul_1845 FxsA cytoplasmic membrane protein.
Dde_2424 protein networkhttps://string-db.org/network/207559.Dde_2424PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvm:DvMF_3106 protein of unknown function DUF6 transmembrane.
rpmB protein networkhttps://string-db.org/network/207559.Dde_2425KEGG: dvl:Dvul_1846 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
Dde_2426 protein networkhttps://string-db.org/network/207559.Dde_2426PFAM: Protein of unknown function DUF177; KEGG: dvl:Dvul_1847 hypothetical protein.
plsX protein networkhttps://string-db.org/network/207559.Dde_2427Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...]
fabH protein networkhttps://string-db.org/network/207559.Dde_24283-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
Dde_2429 protein networkhttps://string-db.org/network/207559.Dde_24293-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
acpP protein networkhttps://string-db.org/network/207559.Dde_2430Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
Dde_2431 protein networkhttps://string-db.org/network/207559.Dde_24313-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
glyA protein networkhttps://string-db.org/network/207559.Dde_2432Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major s [...]
Dde_2433 protein networkhttps://string-db.org/network/207559.Dde_2433PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dvl:Dvul_1855 CMP/dCMP deaminase, zinc-binding.
Dde_2434 protein networkhttps://string-db.org/network/207559.Dde_2434Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...]
Dde_2435 protein networkhttps://string-db.org/network/207559.Dde_2435Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; KEGG: dvu:DVU1200 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein.
ribBA protein networkhttps://string-db.org/network/207559.Dde_2436GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II fami [...]
ribH protein networkhttps://string-db.org/network/207559.Dde_24376,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
nusB protein networkhttps://string-db.org/network/207559.Dde_2438NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the rib [...]
leuS protein networkhttps://string-db.org/network/207559.Dde_2439TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: dvl:Dvul_1861 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
Dde_2440 protein networkhttps://string-db.org/network/207559.Dde_2440KEGG: dvm:DvMF_3089 putative lipoprotein.
Dde_2441 protein networkhttps://string-db.org/network/207559.Dde_2441KEGG: dvm:DvMF_3088 hypothetical protein.
Dde_2442 protein networkhttps://string-db.org/network/207559.Dde_2442KEGG: dvl:Dvul_1864 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; Belongs to the UPF0758 family.
acyP protein networkhttps://string-db.org/network/207559.Dde_2443PFAM: Acylphosphatase-like; KEGG: bts:Btus_1137 acylphosphatase.
lon-2 protein networkhttps://string-db.org/network/207559.Dde_2444Anti-sigma H sporulation factor, LonB; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. R [...]
Dde_2445 protein networkhttps://string-db.org/network/207559.Dde_2445KEGG: dma:DMR_39120 hypothetical protein.
Dde_2446 protein networkhttps://string-db.org/network/207559.Dde_2446TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicas [...]
Dde_2447 protein networkhttps://string-db.org/network/207559.Dde_2447Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; PAS fold; Diguanylate cyclase, [...]
Dde_2448 protein networkhttps://string-db.org/network/207559.Dde_2448Protein of unknown function UPF0118; PFAM: Uncharacterized protein family UPF0118; KEGG: dvm:DvMF_3082 protein of unknown function UPF0118.
Dde_2449 protein networkhttps://string-db.org/network/207559.Dde_2449KEGG: dvm:DvMF_3081 hypothetical protein.
Dde_2450 protein networkhttps://string-db.org/network/207559.Dde_2450Hypothetical protein.
Dde_2451 protein networkhttps://string-db.org/network/207559.Dde_2451KEGG: dvm:DvMF_3080 hypothetical protein.
Dde_2452 protein networkhttps://string-db.org/network/207559.Dde_2452KEGG: dvm:DvMF_3079 hypothetical protein.
Dde_2453 protein networkhttps://string-db.org/network/207559.Dde_2453MazG family protein; KEGG: dvu:DVU1186 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic cor [...]
Dde_2454 protein networkhttps://string-db.org/network/207559.Dde_2454PFAM: Colicin V production protein; KEGG: dvl:Dvul_1872 colicin V production protein.
Dde_2455 protein networkhttps://string-db.org/network/207559.Dde_2455KEGG: dvm:DvMF_3076 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_2456 protein networkhttps://string-db.org/network/207559.Dde_2456PAS domain containing protein; SMART: PAS; GAF; KEGG: dvm:DvMF_3075 signal transduction histidine kinase regulating citrate/malate metabolism.
Dde_2457 protein networkhttps://string-db.org/network/207559.Dde_2457TIGRFAM: HDIG; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dvl:Dvul_1875 response regulator receiver modulated met [...]
Dde_2458 protein networkhttps://string-db.org/network/207559.Dde_2458PFAM: ThiamineS; KEGG: dvl:Dvul_1876 thiamineS protein.
Dde_2459 protein networkhttps://string-db.org/network/207559.Dde_2459PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: dvl:Dvul_2316 UBA/ThiF-type NAD/FAD binding protein.
Dde_2460 protein networkhttps://string-db.org/network/207559.Dde_2460PFAM: Aldehyde ferredoxin oxidoreductase, C-terminal; Aldehyde ferredoxin oxidoreductase, N-terminal; KEGG: dvl:Dvul_1877 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreduc [...]
Dde_2461 protein networkhttps://string-db.org/network/207559.Dde_2461KEGG: dvl:Dvul_1878 hypothetical protein.
Dde_2462 protein networkhttps://string-db.org/network/207559.Dde_2462KEGG: dvm:DvMF_3070 hypothetical protein.
Dde_2463 protein networkhttps://string-db.org/network/207559.Dde_2463Hypothetical protein.
Dde_2464 protein networkhttps://string-db.org/network/207559.Dde_2464KEGG: dvl:Dvul_1881 hypothetical protein.
murJ-2 protein networkhttps://string-db.org/network/207559.Dde_2468Virulence factor MVIN family protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
Dde_2471 protein networkhttps://string-db.org/network/207559.Dde_2471KEGG: dvl:Dvul_1902 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
groL protein networkhttps://string-db.org/network/207559.Dde_2473Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
groS protein networkhttps://string-db.org/network/207559.Dde_2474Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
Dde_2476 protein networkhttps://string-db.org/network/207559.Dde_2476Methionine transporter from the Na+/H+ antiporter superfamily; PFAM: Na+/H+ antiporter NhaC-like; KEGG: dsa:Desal_2013 Na+/H+ antiporter NhaC.
Dde_2477 protein networkhttps://string-db.org/network/207559.Dde_2477KEGG: dvm:DvMF_3061 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_2478 protein networkhttps://string-db.org/network/207559.Dde_2478KEGG: dvu:DVU1980 hypothetical protein.
Dde_2479 protein networkhttps://string-db.org/network/207559.Dde_2479PFAM: Protein of unknown function DUF520; KEGG: dvm:DvMF_3058 putative nucleotide-binding protein; Belongs to the UPF0234 family.
Dde_2480 protein networkhttps://string-db.org/network/207559.Dde_2480DEAD/DEAH box helicase domain protein; KEGG: dvu:DVU1982 ATP-dependent RNA helicase RhlE; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like he [...]
Dde_2481 protein networkhttps://string-db.org/network/207559.Dde_2481PFAM: Aminoglycoside phosphotransferase; KEGG: dvm:DvMF_3056 aminoglycoside phosphotransferase.
msrA-2 protein networkhttps://string-db.org/network/207559.Dde_2482Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methioni [...]
Dde_2483 protein networkhttps://string-db.org/network/207559.Dde_2483Hypothetical protein.
Dde_2484 protein networkhttps://string-db.org/network/207559.Dde_2484PFAM: Protein of unknown function DUF88; KEGG: dvm:DvMF_3051 protein of unknown function DUF88.
Dde_2486 protein networkhttps://string-db.org/network/207559.Dde_2486Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
Dde_2488 protein networkhttps://string-db.org/network/207559.Dde_2488PFAM: Protein of unknown function DUF554; KEGG: dvm:DvMF_3049 protein of unknown function DUF554.
Dde_2490 protein networkhttps://string-db.org/network/207559.Dde_2490PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dsa:Desal_3556 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
Dde_2491 protein networkhttps://string-db.org/network/207559.Dde_2491KEGG: dsa:Desal_3555 hypothetical protein.
Dde_2492 protein networkhttps://string-db.org/network/207559.Dde_2492KEGG: din:Selin_1699 AAA family ATPase.
Dde_2493 protein networkhttps://string-db.org/network/207559.Dde_2493KEGG: din:Selin_1700 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA primase, small subunit; SMART: DEAD-like helicase, N-te [...]
Dde_2494 protein networkhttps://string-db.org/network/207559.Dde_2494PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: gpb:HDN1F_07100 hypothetical protein.
Dde_2495 protein networkhttps://string-db.org/network/207559.Dde_2495KEGG: cpc:Cpar_0962 hypothetical protein.
Dde_2496 protein networkhttps://string-db.org/network/207559.Dde_2496PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: cph:Cpha266_1398 restriction modification system DNA specificity subunit.
Dde_2497 protein networkhttps://string-db.org/network/207559.Dde_2497KEGG: plt:Plut_0640 hypothetical protein.
Dde_2498 protein networkhttps://string-db.org/network/207559.Dde_2498Site-specific DNA-methyltransferase (adenine-specific); KEGG: ppd:Ppro_0353 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific.
Dde_2499 protein networkhttps://string-db.org/network/207559.Dde_2499PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, Ec [...]
Dde_2500 protein networkhttps://string-db.org/network/207559.Dde_2500KEGG: din:Selin_1711 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
Dde_2501 protein networkhttps://string-db.org/network/207559.Dde_2501KEGG: din:Selin_1712 hypothetical protein.
Dde_2506 protein networkhttps://string-db.org/network/207559.Dde_2506KEGG: dvm:DvMF_1575 sulfate transporter; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS.
Dde_2507 protein networkhttps://string-db.org/network/207559.Dde_2507PEP motif putative anchor domain protein; KEGG: dba:Dbac_2235 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial.
Dde_2509 protein networkhttps://string-db.org/network/207559.Dde_2509PEP motif putative anchor domain protein; KEGG: dvm:DvMF_0694 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial.
Dde_2510 protein networkhttps://string-db.org/network/207559.Dde_2510PEP motif putative anchor domain protein; KEGG: dvm:DvMF_0694 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial.
greA protein networkhttps://string-db.org/network/207559.Dde_2512Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
Dde_2513 protein networkhttps://string-db.org/network/207559.Dde_2513PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_2515 protein networkhttps://string-db.org/network/207559.Dde_2515PFAM: Protein of unknown function DUF401; KEGG: das:Daes_1056 hypothetical protein.
mtgA protein networkhttps://string-db.org/network/207559.Dde_2516Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 fam [...]
Dde_2518 protein networkhttps://string-db.org/network/207559.Dde_2518Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: dvl:Dvul_0418 diguanylate cyclase with PAS/PAC senso [...]
Dde_2519 protein networkhttps://string-db.org/network/207559.Dde_2519TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dvl:Dvul_1677 TraR/DksA family transcriptional regulator.
Dde_2520 protein networkhttps://string-db.org/network/207559.Dde_2520PFAM: Protein of unknown function DUF2179; Protein of unknown function DUF161; KEGG: dba:Dbac_0209 protein of unknown function DUF161.
Dde_2521 protein networkhttps://string-db.org/network/207559.Dde_2521PFAM: Protein of unknown function DUF1498; KEGG: dsa:Desal_0499 hypothetical protein.
Dde_2522 protein networkhttps://string-db.org/network/207559.Dde_2522PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: dsa:Desal_0500 PfkB domain protein.
Dde_2523 protein networkhttps://string-db.org/network/207559.Dde_2523KEGG: tte:TTE1983 phosphatase/phosphohexomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like [...]
Dde_2524 protein networkhttps://string-db.org/network/207559.Dde_2524PFAM: Nitroreductase-like; KEGG: dat:HRM2_10320 NfnB1.
Dde_2525 protein networkhttps://string-db.org/network/207559.Dde_2525TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: dvm:DvMF_3034 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolat [...]
Dde_2527 protein networkhttps://string-db.org/network/207559.Dde_2527Hypothetical protein.
Dde_2528 protein networkhttps://string-db.org/network/207559.Dde_2528KEGG: dvm:DvMF_3033 hypothetical protein.
argH protein networkhttps://string-db.org/network/207559.Dde_2530TIGRFAM: Argininosuccinate lyase; KEGG: dvl:Dvul_1901 argininosuccinate lyase; PFAM: Fumarate lyase.
argG protein networkhttps://string-db.org/network/207559.Dde_2531TIGRFAM: Argininosuccinate synthase; KEGG: dvm:DvMF_0047 argininosuccinate synthase; PFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
argF protein networkhttps://string-db.org/network/207559.Dde_2532Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...]
Dde_2533 protein networkhttps://string-db.org/network/207559.Dde_2533KEGG: azl:AZL_008920 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_2534 protein networkhttps://string-db.org/network/207559.Dde_2534PFAM: Glycosyl transferase, family 2; KEGG: ret:RHE_CH01521 putative glucosyltransferase protein.
Dde_2535 protein networkhttps://string-db.org/network/207559.Dde_2535PFAM: ApbE-like lipoprotein; KEGG: dvm:DvMF_0044 hypothetical protein.
Dde_2536 protein networkhttps://string-db.org/network/207559.Dde_2536KEGG: das:Daes_1846 hypothetical protein.
Dde_2537 protein networkhttps://string-db.org/network/207559.Dde_2537PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dsa:Desal_1343 TetR family transcriptional regulator.
Dde_2538 protein networkhttps://string-db.org/network/207559.Dde_2538Hypothetical protein; KEGG: dsa:Desal_1343 TetR family transcriptional regulator.
Dde_2542 protein networkhttps://string-db.org/network/207559.Dde_2542KEGG: tpr:Tpau_0881 hypothetical protein.
Dde_2543 protein networkhttps://string-db.org/network/207559.Dde_2543KEGG: dvu:DVU1713 hypothetical protein.
Dde_2544 protein networkhttps://string-db.org/network/207559.Dde_2544Hypothetical protein.
Dde_2545 protein networkhttps://string-db.org/network/207559.Dde_2545KEGG: dvm:DvMF_1065 hypothetical protein.
Dde_2546 protein networkhttps://string-db.org/network/207559.Dde_2546KEGG: dvm:DvMF_1066 hypothetical protein.
Dde_2547 protein networkhttps://string-db.org/network/207559.Dde_2547KEGG: dvl:Dvul_0649 hypothetical protein.
Dde_2548 protein networkhttps://string-db.org/network/207559.Dde_2548KEGG: dvm:DvMF_1070 hypothetical protein.
Dde_2549 protein networkhttps://string-db.org/network/207559.Dde_2549KEGG: dvl:Dvul_0647 hypothetical protein.
Dde_2550 protein networkhttps://string-db.org/network/207559.Dde_2550KEGG: dvm:DvMF_1072 hypothetical protein.
Dde_2551 protein networkhttps://string-db.org/network/207559.Dde_2551KEGG: dvm:DvMF_1073 hypothetical protein.
Dde_2552 protein networkhttps://string-db.org/network/207559.Dde_2552PFAM: Lytic transglycosylase-like, catalytic; KEGG: bph:Bphy_6050 lytic transglycosylase catalytic.
Dde_2556 protein networkhttps://string-db.org/network/207559.Dde_2556TIGRFAM: Phage uncharacterised protein, C-terminal; KEGG: dvl:Dvul_0639 hypothetical protein.
Dde_2557 protein networkhttps://string-db.org/network/207559.Dde_2557KEGG: dvm:DvMF_1107 hypothetical protein.
Dde_2558 protein networkhttps://string-db.org/network/207559.Dde_2558Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; PAS fold; CHASE4; Diguanylate cyclase, [...]
Dde_2559 protein networkhttps://string-db.org/network/207559.Dde_2559PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: das:Daes_2674 glycoside hydrolase family 3 domain-containing protein.
Dde_2560 protein networkhttps://string-db.org/network/207559.Dde_2560Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against [...]
Dde_2561 protein networkhttps://string-db.org/network/207559.Dde_2561Rhodanese-like protein; KEGG: dvl:Dvul_1199 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
Dde_2562 protein networkhttps://string-db.org/network/207559.Dde_2562KEGG: dvu:DVU1974 pyridine nucleotide-disulfide oxidoreductase; TIGRFAM: Pyridine nucleotide-disulfide oxidoreductase family protein, N-terminal; PFAM: Pyridine nucleotide-disulfide oxidoreductas [...]
Dde_2563 protein networkhttps://string-db.org/network/207559.Dde_2563PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dap:Dacet_1213 metal dependent phosphohydrolase.
Dde_2564 protein networkhttps://string-db.org/network/207559.Dde_2564KEGG: dvl:Dvul_0626 hypothetical protein.
Dde_2565 protein networkhttps://string-db.org/network/207559.Dde_2565PFAM: Mechanosensitive ion channel MscS; KEGG: tgr:Tgr7_1533 MscS mechanosensitive ion channel.
Dde_2566 protein networkhttps://string-db.org/network/207559.Dde_2566KEGG: dvm:DvMF_1076 dienelactone hydrolase-like protein.
Dde_2567 protein networkhttps://string-db.org/network/207559.Dde_2567KEGG: hau:Haur_1275 hypothetical protein.
Dde_2568 protein networkhttps://string-db.org/network/207559.Dde_2568KEGG: dvl:Dvul_0627 hypothetical protein.
Dde_2569 protein networkhttps://string-db.org/network/207559.Dde_2569KEGG: dvm:DvMF_1078 hypothetical protein.
Dde_2573 protein networkhttps://string-db.org/network/207559.Dde_2573Lipoprotein; KEGG: dvl:Dvul_2125 lipoprotein.
Dde_2575 protein networkhttps://string-db.org/network/207559.Dde_2575KEGG: dvm:DvMF_2903 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_2576 protein networkhttps://string-db.org/network/207559.Dde_2576Porphobilinogen synthase; KEGG: dvu:DVU0856 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; Belongs to the ALAD family.
Dde_2577 protein networkhttps://string-db.org/network/207559.Dde_2577KEGG: dvl:Dvul_2128 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_2578 protein networkhttps://string-db.org/network/207559.Dde_2578Putative heme biosynthesis protein; SMART: Transcription regulator, AsnC-type; KEGG: dvl:Dvul_2129 AsnC family transcriptional regulator.
Dde_2579 protein networkhttps://string-db.org/network/207559.Dde_2579KEGG: dsa:Desal_1386 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR.
Dde_2580 protein networkhttps://string-db.org/network/207559.Dde_2580PFAM: Na+/H+ antiporter NhaC-like; KEGG: dvl:Dvul_0605 Na+/H+ antiporter NhaC.
Dde_2581 protein networkhttps://string-db.org/network/207559.Dde_2581TIGRFAM: Pyridoxal phosphate-dependent deaminase; KEGG: dsa:Desal_1391 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
Dde_2582 protein networkhttps://string-db.org/network/207559.Dde_2582KEGG: dvl:Dvul_0603 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP.
Dde_2584 protein networkhttps://string-db.org/network/207559.Dde_2584ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: swd:Swoo_1419 hypothetical protein.
Dde_2585 protein networkhttps://string-db.org/network/207559.Dde_2585KEGG: dvl:Dvul_0949 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_2591 protein networkhttps://string-db.org/network/207559.Dde_2591KEGG: dvm:DvMF_0918 hypothetical protein.
Dde_2592 protein networkhttps://string-db.org/network/207559.Dde_2592KEGG: dvl:Dvul_0780 hypothetical protein.
Dde_2593 protein networkhttps://string-db.org/network/207559.Dde_2593ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0920 binding-protein-dependent transport systems inner [...]
Dde_2594 protein networkhttps://string-db.org/network/207559.Dde_2594ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0921 binding-protein-dependent transport systems inner [...]
Dde_2596 protein networkhttps://string-db.org/network/207559.Dde_2596SMC domain protein; May be involved in recombinational repair of damaged DNA.
Dde_2597 protein networkhttps://string-db.org/network/207559.Dde_2597KEGG: dvm:DvMF_0924 hypothetical protein.
rnr protein networkhttps://string-db.org/network/207559.Dde_2598Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
lpxK protein networkhttps://string-db.org/network/207559.Dde_2600Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...]
Dde_2601 protein networkhttps://string-db.org/network/207559.Dde_2601Protein of unknown function UPF0005; PFAM: Uncharacterized protein family UPF0005; KEGG: dvm:DvMF_0927 protein of unknown function UPF0005; Belongs to the BI1 family.
Dde_2602 protein networkhttps://string-db.org/network/207559.Dde_2602KEGG: dvl:Dvul_2357 hypothetical protein.
Dde_2603 protein networkhttps://string-db.org/network/207559.Dde_2603KEGG: dvl:Dvul_0769 glycoside hydrolase family protein.
Dde_2604 protein networkhttps://string-db.org/network/207559.Dde_2604CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; KEGG: dvl:Dvul_0728 XRE family transcriptional regulator.
Dde_2605 protein networkhttps://string-db.org/network/207559.Dde_2605KEGG: dvl:Dvul_0727 hypothetical protein.
rplM protein networkhttps://string-db.org/network/207559.Dde_2607Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...]
rpsI protein networkhttps://string-db.org/network/207559.Dde_2608PFAM: Ribosomal protein S9; KEGG: dvm:DvMF_0970 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
aroK protein networkhttps://string-db.org/network/207559.Dde_2609Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
Dde_2610 protein networkhttps://string-db.org/network/207559.Dde_2610KEGG: dvm:DvMF_0972 hypothetical protein.
Dde_2611 protein networkhttps://string-db.org/network/207559.Dde_2611KEGG: dvm:DvMF_0973 putative lipoprotein.
Dde_2613 protein networkhttps://string-db.org/network/207559.Dde_2613KEGG: dvm:DvMF_0974 transcriptional regulator, MucR family.
gatB protein networkhttps://string-db.org/network/207559.Dde_2615glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
Dde_2616 protein networkhttps://string-db.org/network/207559.Dde_2616KEGG: dvm:DvMF_0579 hypothetical protein.
Dde_2617 protein networkhttps://string-db.org/network/207559.Dde_2617KEGG: dvl:Dvul_1277 hypothetical protein.
nadK protein networkhttps://string-db.org/network/207559.Dde_2618ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hyd [...]
gmhA protein networkhttps://string-db.org/network/207559.Dde_2619Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
Dde_2620 protein networkhttps://string-db.org/network/207559.Dde_2620TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: drt:Dret_0687 regulatory protein, FmdB family; SMART: Regulatory protein, FmdB, putative.
hemC protein networkhttps://string-db.org/network/207559.Dde_2621Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
Dde_2622 protein networkhttps://string-db.org/network/207559.Dde_2622KEGG: aha:AHA_1230 ABC-type sugar transport system, ATPase component.
Dde_2623 protein networkhttps://string-db.org/network/207559.Dde_2623PFAM: Protein of unknown function DUF2219; KEGG: dvm:DvMF_0587 hypothetical protein.
Dde_2624 protein networkhttps://string-db.org/network/207559.Dde_2624PFAM: Protein of unknown function DUF2064; KEGG: dvu:DVU1891 hypothetical protein.
Dde_2625 protein networkhttps://string-db.org/network/207559.Dde_2625PFAM: Glycosyl transferase, family 2; KEGG: dvu:DVU1892 glycosyl transferase group 2 family protein.
Dde_2626 protein networkhttps://string-db.org/network/207559.Dde_2626KEGG: dvl:Dvul_1270 peptidase S16, lon domain-containing protein.
Dde_2627 protein networkhttps://string-db.org/network/207559.Dde_2627KEGG: dvu:DVU0064 hypothetical protein.
Dde_2628 protein networkhttps://string-db.org/network/207559.Dde_2628Hypothetical protein.
pgk protein networkhttps://string-db.org/network/207559.Dde_2630HAMAP: Phosphoglycerate kinase; KEGG: dvl:Dvul_0716 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
Dde_2631 protein networkhttps://string-db.org/network/207559.Dde_2631Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
Dde_2632 protein networkhttps://string-db.org/network/207559.Dde_2632TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: dvl:Dvul_0714 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
Dde_2633 protein networkhttps://string-db.org/network/207559.Dde_2633KEGG: dvl:Dvul_0713 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
pheT protein networkhttps://string-db.org/network/207559.Dde_2634TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: dvl:Dvul_0712 phenylalanyl-tRNA synthetase subunit beta.
pheS protein networkhttps://string-db.org/network/207559.Dde_2635KEGG: dvl:Dvul_0711 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA [...]
rplT protein networkhttps://string-db.org/network/207559.Dde_2636Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...]
rpmI protein networkhttps://string-db.org/network/207559.Dde_2637KEGG: dvl:Dvul_0709 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; PFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
infC protein networkhttps://string-db.org/network/207559.Dde_2638Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
thrS protein networkhttps://string-db.org/network/207559.Dde_2639threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor en [...]
hcp protein networkhttps://string-db.org/network/207559.Dde_2641Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
Dde_2642 protein networkhttps://string-db.org/network/207559.Dde_2642PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0703 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_2643 protein networkhttps://string-db.org/network/207559.Dde_2643UspA domain-containing protein; PFAM: UspA; KEGG: drt:Dret_1199 bile acid:sodium symporter.
Dde_2644 protein networkhttps://string-db.org/network/207559.Dde_2644KEGG: dvm:DvMF_0993 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator [...]
Dde_2645 protein networkhttps://string-db.org/network/207559.Dde_2645KEGG: dvm:DvMF_0994 hypothetical protein.
Dde_2646 protein networkhttps://string-db.org/network/207559.Dde_2646KEGG: drt:Dret_2266 hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0066; PFAM: Uncharacterized protein family UPF0066.
Dde_2647 protein networkhttps://string-db.org/network/207559.Dde_2647KEGG: dvm:DvMF_1115 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
gltX protein networkhttps://string-db.org/network/207559.Dde_2648glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
Dde_2650 protein networkhttps://string-db.org/network/207559.Dde_2650PFAM: Uncharacterized conserved protein UCP018688; KEGG: dvl:Dvul_0694 hypothetical protein.
Dde_2651 protein networkhttps://string-db.org/network/207559.Dde_2651KEGG: dvu:DVU2555 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE.
Dde_2652 protein networkhttps://string-db.org/network/207559.Dde_2652Hypothetical protein.
Dde_2653 protein networkhttps://string-db.org/network/207559.Dde_2653Hypothetical protein.
birA protein networkhttps://string-db.org/network/207559.Dde_2654biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
bioB protein networkhttps://string-db.org/network/207559.Dde_2655Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...]
bioA protein networkhttps://string-db.org/network/207559.Dde_2656Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8 [...]
Dde_2657 protein networkhttps://string-db.org/network/207559.Dde_2657PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: din:Selin_0491 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ.
Dde_2658 protein networkhttps://string-db.org/network/207559.Dde_2658PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dvm:DvMF_1004 short-chain dehydrogenase/reductase SDR.
Dde_2659 protein networkhttps://string-db.org/network/207559.Dde_2659PFAM: Phosphopantetheine-binding; KEGG: dvl:Dvul_0686 acyl carrier protein.
Dde_2660 protein networkhttps://string-db.org/network/207559.Dde_2660KEGG: dvm:DvMF_1006 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases fam [...]
Dde_2661 protein networkhttps://string-db.org/network/207559.Dde_2661KEGG: dvm:DvMF_1007 hypothetical protein.
Dde_2662 protein networkhttps://string-db.org/network/207559.Dde_26628-amino-7-oxononanoate synthase; KEGG: dvm:DvMF_1008 aminotransferase class I and II; PFAM: Aminotransferase, class I/II.
bioD protein networkhttps://string-db.org/network/207559.Dde_2663Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an urei [...]
lysA-2 protein networkhttps://string-db.org/network/207559.Dde_2664Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
Dde_2665 protein networkhttps://string-db.org/network/207559.Dde_2665Putative transcriptional regulator for lysine biosynthesis and transport; PFAM: Transcriptional regulator TrmB; KEGG: dvl:Dvul_0680 TrmB family transcriptional regulator.
Dde_2667 protein networkhttps://string-db.org/network/207559.Dde_2667Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dvm:DvMF_1012 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
Dde_2668 protein networkhttps://string-db.org/network/207559.Dde_2668PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: dvm:DvMF_1013 peptidylprolyl isomerase FKBP-type.
Dde_2669 protein networkhttps://string-db.org/network/207559.Dde_2669Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) [...]
Dde_2670 protein networkhttps://string-db.org/network/207559.Dde_2670KEGG: dvm:DvMF_1016 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit.
Dde_2672 protein networkhttps://string-db.org/network/207559.Dde_2672KEGG: dvm:DvMF_1017 hypothetical protein.
Dde_2673 protein networkhttps://string-db.org/network/207559.Dde_2673KEGG: dvl:Dvul_0673 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit.
Dde_2674 protein networkhttps://string-db.org/network/207559.Dde_2674KEGG: dvl:Dvul_0670 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal tra [...]
Dde_2675 protein networkhttps://string-db.org/network/207559.Dde_2675Hpt domain protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region.
fur-3 protein networkhttps://string-db.org/network/207559.Dde_2676PFAM: Ferric-uptake regulator; KEGG: dvl:Dvul_2043 ferric uptake regulator family protein; Belongs to the Fur family.
Dde_2677 protein networkhttps://string-db.org/network/207559.Dde_2677Metalloprotease, iron regulated; PFAM: Peptidase M16C associated; Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: dvm:DvMF_1365 peptidase M16C associated domain protein.
Dde_2679 protein networkhttps://string-db.org/network/207559.Dde_2679Hypothetical protein.
Dde_2680 protein networkhttps://string-db.org/network/207559.Dde_2680TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_1366 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_2681 protein networkhttps://string-db.org/network/207559.Dde_2681KEGG: dvl:Dvul_2046 hypothetical protein.
Dde_2682 protein networkhttps://string-db.org/network/207559.Dde_2682PFAM: Glycoside hydrolase, family 13, N-terminal; KEGG: dvl:Dvul_2047 isoamylase N-terminal domain-containing protein.
Dde_2684 protein networkhttps://string-db.org/network/207559.Dde_2684TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: dvl:Dvul_2049 DNA binding domain-containing protein.
Dde_2685 protein networkhttps://string-db.org/network/207559.Dde_2685KEGG: dvm:DvMF_1369 hypothetical protein.
Dde_2687 protein networkhttps://string-db.org/network/207559.Dde_2687PAS/PAC sensor signal transduction histidine kinase; KEGG: dvm:DvMF_1375 histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; SMART: ATP-binding region, ATPase-like; PAS.
Dde_2688 protein networkhttps://string-db.org/network/207559.Dde_2688TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: dvl:Dvul_2054 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.
proB protein networkhttps://string-db.org/network/207559.Dde_2689Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
obg protein networkhttps://string-db.org/network/207559.Dde_2690GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in contro [...]
rpmA protein networkhttps://string-db.org/network/207559.Dde_2691KEGG: drt:Dret_2181 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
rplU protein networkhttps://string-db.org/network/207559.Dde_2692Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
Dde_2693 protein networkhttps://string-db.org/network/207559.Dde_2693Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymid [...]
Dde_2695 protein networkhttps://string-db.org/network/207559.Dde_2695KEGG: dvm:DvMF_1383 RNA methyltransferase, TrmA family; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; Belongs to the clas [...]
Dde_2698 protein networkhttps://string-db.org/network/207559.Dde_2698KEGG: dvl:Dvul_2064 ATP synthase protein I.
Dde_2699 protein networkhttps://string-db.org/network/207559.Dde_2699KEGG: dvl:Dvul_2065 hypothetical protein.
atpB protein networkhttps://string-db.org/network/207559.Dde_2700ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
atpE protein networkhttps://string-db.org/network/207559.Dde_2701ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramemb [...]
rex protein networkhttps://string-db.org/network/207559.Dde_2702CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
Dde_2703 protein networkhttps://string-db.org/network/207559.Dde_2703PFAM: Protein of unknown function DUF62; KEGG: dvm:DvMF_1391 protein of unknown function DUF62.
cobS protein networkhttps://string-db.org/network/207559.Dde_2704Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylco [...]
Dde_2705 protein networkhttps://string-db.org/network/207559.Dde_2705TIGRFAM: Flagellar export FliJ; KEGG: dvm:DvMF_1393 flagellar export protein FliJ.
Dde_2706 protein networkhttps://string-db.org/network/207559.Dde_2706KEGG: dvl:Dvul_2072 hypothetical protein.
truA protein networkhttps://string-db.org/network/207559.Dde_2707tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
Dde_2708 protein networkhttps://string-db.org/network/207559.Dde_2708KEGG: dvm:DvMF_1396 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA).
Dde_2710 protein networkhttps://string-db.org/network/207559.Dde_2710Hypothetical protein.
Dde_2711 protein networkhttps://string-db.org/network/207559.Dde_2711KEGG: dvu:DVU0908 iron-sulfur cluster-binding protein.
Dde_2712 protein networkhttps://string-db.org/network/207559.Dde_2712PFAM: Ribosomal protein Rsm22, bacterial-type; KEGG: dvm:DvMF_1399 ribosomal small subunit Rsm22.
lipB protein networkhttps://string-db.org/network/207559.Dde_2713Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
lipA protein networkhttps://string-db.org/network/207559.Dde_2714Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...]
Dde_2715 protein networkhttps://string-db.org/network/207559.Dde_2715KEGG: dvm:DvMF_1134 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1.
Dde_2716 protein networkhttps://string-db.org/network/207559.Dde_2716Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: dvl:Dvul_2081 metal dependent phosphohydrolase.
Dde_2717 protein networkhttps://string-db.org/network/207559.Dde_2717PFAM: Tetratricopeptide TPR-1; KEGG: dvm:DvMF_1136 tetratricopeptide domain protein.
pyrF protein networkhttps://string-db.org/network/207559.Dde_2718Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
gmk protein networkhttps://string-db.org/network/207559.Dde_2719Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
Dde_2720 protein networkhttps://string-db.org/network/207559.Dde_2720PFAM: Protein of unknown function DUF370; KEGG: das:Daes_2314 hypothetical protein; Belongs to the RemA family.
Dde_2721 protein networkhttps://string-db.org/network/207559.Dde_2721YicC-like domain-containing protein; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; KEGG: dvl:Dvul_2086 hypothetical protein.
Dde_2722 protein networkhttps://string-db.org/network/207559.Dde_2722RNA modification enzyme, MiaB family; TIGRFAM: Methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; KEGG: dvl:Dvul_2087 RNA modification protein; SMART: Elongator protein [...]
Dde_2724 protein networkhttps://string-db.org/network/207559.Dde_2724PFAM: NLP/P60; KEGG: dvl:Dvul_2088 NLP/P60 protein.
recD2 protein networkhttps://string-db.org/network/207559.Dde_2725Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase a [...]
aroC protein networkhttps://string-db.org/network/207559.Dde_2726Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
Dde_2727 protein networkhttps://string-db.org/network/207559.Dde_2727PFAM: UspA; KEGG: dvm:DvMF_1409 UspA domain protein.
aroK-2 protein networkhttps://string-db.org/network/207559.Dde_2728HAMAP: Shikimate kinase; KEGG: dvl:Dvul_2092 shikimate kinase II; PFAM: Shikimate kinase.
Dde_2729 protein networkhttps://string-db.org/network/207559.Dde_2729PFAM: Major facilitator superfamily MFS-1; KEGG: dsa:Desal_3720 major facilitator superfamily MFS_1.
Dde_2730 protein networkhttps://string-db.org/network/207559.Dde_2730KEGG: dvl:Dvul_2093 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II.
Dde_2731 protein networkhttps://string-db.org/network/207559.Dde_2731PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: dvm:DvMF_1412 homoserine dehydrogenase.
Dde_2732 protein networkhttps://string-db.org/network/207559.Dde_2732KEGG: dvm:DvMF_1414 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme.
Dde_2733 protein networkhttps://string-db.org/network/207559.Dde_2733MltA domain protein; PFAM: MltA; 3D; KEGG: dvu:DVU0887 transglycosylase.
Dde_2734 protein networkhttps://string-db.org/network/207559.Dde_2734KEGG: dvl:Dvul_2947 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting r [...]
Dde_2735 protein networkhttps://string-db.org/network/207559.Dde_2735KEGG: dvm:DvMF_1421 thioesterase superfamily protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily.
Dde_2736 protein networkhttps://string-db.org/network/207559.Dde_2736PFAM: Amidohydrolase 2; KEGG: dvm:DvMF_1422 amidohydrolase 2.
Dde_2738 protein networkhttps://string-db.org/network/207559.Dde_2738PFAM: Ferredoxin thioredoxin reductase, beta subunit; KEGG: dvm:DvMF_2934 hypothetical protein.
Dde_2739 protein networkhttps://string-db.org/network/207559.Dde_2739PFAM: Glutaredoxin; KEGG: dvm:DvMF_2933 glutaredoxin.
Dde_2740 protein networkhttps://string-db.org/network/207559.Dde_2740KEGG: dvm:DvMF_2932 hypothetical protein.
Dde_2741 protein networkhttps://string-db.org/network/207559.Dde_2741TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFTu/EF1A, domain 2; Protein synthesis factor, GTP-binding; Translation e [...]
Dde_2742 protein networkhttps://string-db.org/network/207559.Dde_2742PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dvu:DVU0769 pyridoxamine kinase; Belongs to the pyridoxine kinase family.
murI protein networkhttps://string-db.org/network/207559.Dde_2743Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
Dde_2744 protein networkhttps://string-db.org/network/207559.Dde_2744Serine--pyruvate transaminase; KEGG: dvm:DvMF_2809 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase.
Dde_2747 protein networkhttps://string-db.org/network/207559.Dde_2747Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Protein of unknown function DUF160; KEGG: kol:Kole_1669 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM.
Dde_2749 protein networkhttps://string-db.org/network/207559.Dde_2749PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dat:HRM2_41980 Hbr3.
Dde_2750 protein networkhttps://string-db.org/network/207559.Dde_2750PFAM: Transport-associated; KEGG: dal:Dalk_2148 transport-associated protein.
Dde_2751 protein networkhttps://string-db.org/network/207559.Dde_2751Glycerate kinase; KEGG: dvm:DvMF_2801 hydroxypyruvate reductase; PFAM: MOFRL.
Dde_2752 protein networkhttps://string-db.org/network/207559.Dde_2752Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
Dde_2753 protein networkhttps://string-db.org/network/207559.Dde_2753KEGG: dvm:DvMF_2798 transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.
Dde_2754 protein networkhttps://string-db.org/network/207559.Dde_2754KEGG: dvm:DvMF_2797 hypothetical protein.
Dde_2755 protein networkhttps://string-db.org/network/207559.Dde_2755PFAM: Tetratricopeptide TPR-1; KEGG: dvl:Dvul_2211 tetratricopeptide domain-containing protein.
Dde_2758 protein networkhttps://string-db.org/network/207559.Dde_2758PFAM: Peptidase M29, aminopeptidase II; KEGG: dvm:DvMF_2795 peptidase M29 aminopeptidase II.
Dde_2759 protein networkhttps://string-db.org/network/207559.Dde_2759KEGG: dvl:Dvul_2213 hypothetical protein.
Dde_2760 protein networkhttps://string-db.org/network/207559.Dde_2760PFAM: Type IV pilus assembly PilZ; KEGG: dvl:Dvul_2214 type IV pilus assembly PilZ.
Dde_2761 protein networkhttps://string-db.org/network/207559.Dde_2761PFAM: Tetratricopeptide TPR-1; KEGG: dvm:DvMF_2790 tetratricopeptide TPR_2 repeat protein.
Dde_2762 protein networkhttps://string-db.org/network/207559.Dde_2762KEGG: dvm:DvMF_2789 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
Dde_2763 protein networkhttps://string-db.org/network/207559.Dde_2763Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2788 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_2764 protein networkhttps://string-db.org/network/207559.Dde_2764ABC-type transporter, periplasmic subunit family 3; KEGG: dvm:DvMF_2787 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular s [...]
Dde_2765 protein networkhttps://string-db.org/network/207559.Dde_2765KEGG: dvu:DVU0751 His/Glu/Gln/Arg/opine ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transp [...]
Dde_2766 protein networkhttps://string-db.org/network/207559.Dde_2766PFAM: Glycosyl transferase, group 1; KEGG: das:Daes_2652 group 1 glycosyl transferase.
purT protein networkhttps://string-db.org/network/207559.Dde_2767Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N [...]
Dde_2768 protein networkhttps://string-db.org/network/207559.Dde_2768PFAM: Extracellular ligand-binding receptor; KEGG: sfu:Sfum_2306 extracellular ligand-binding receptor.
Dde_2769 protein networkhttps://string-db.org/network/207559.Dde_2769Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold-3; HAMP linker domain; Signal transduc [...]
Dde_2770 protein networkhttps://string-db.org/network/207559.Dde_2770KEGG: dvm:DvMF_2749 hypothetical protein.
nhaA protein networkhttps://string-db.org/network/207559.Dde_2771Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
Dde_2772 protein networkhttps://string-db.org/network/207559.Dde_2772PFAM: Protein of unknown function DUF23; KEGG: dba:Dbac_0115 protein of unknown function DUF23.
Dde_2773 protein networkhttps://string-db.org/network/207559.Dde_2773PFAM: Magnesium chelatase, ChlI subunit; KEGG: dvl:Dvul_2256 Mg chelatase, subunit ChlI.
Dde_2774 protein networkhttps://string-db.org/network/207559.Dde_2774PFAM: Recombinase; Resolvase, N-terminal; KEGG: dvm:DvMF_2727 recombinase.
Dde_2776 protein networkhttps://string-db.org/network/207559.Dde_2776KEGG: das:Daes_0503 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
Dde_2777 protein networkhttps://string-db.org/network/207559.Dde_2777PFAM: Protein of unknown function DUF318, transmembrane; KEGG: pca:Pcar_0049 permease.
Dde_2778 protein networkhttps://string-db.org/network/207559.Dde_2778TIGRFAM: Redox-active disulfide protein 2; KEGG: dsa:Desal_2205 redox-active disulfide protein 2.
Dde_2781 protein networkhttps://string-db.org/network/207559.Dde_2781Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: das:Daes_0507 thioredoxin domain-containing protein.
Dde_2782 protein networkhttps://string-db.org/network/207559.Dde_2782PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: dba:Dbac_1909 cytochrome c biogenesis protein transmembrane region.
Dde_2783 protein networkhttps://string-db.org/network/207559.Dde_2783KEGG: das:Daes_0509 rhodanese domain-containing protein.
Dde_2786 protein networkhttps://string-db.org/network/207559.Dde_2786SMART: Rhodanese-like; KEGG: dat:HRM2_16100 rhodanese-like domain family protein.
Dde_2787 protein networkhttps://string-db.org/network/207559.Dde_2787PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease.
Dde_2791 protein networkhttps://string-db.org/network/207559.Dde_2791KEGG: dsa:Desal_2201 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter.
Dde_2792 protein networkhttps://string-db.org/network/207559.Dde_2792Arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: das:Daes_1099 protein-tyrosine phosphatase, low molecular weight.
Dde_2793 protein networkhttps://string-db.org/network/207559.Dde_2793Arsenate reductase; KEGG: dsa:Desal_2313 protein-tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
Dde_2795 protein networkhttps://string-db.org/network/207559.Dde_2795Prophage antirepressor; PFAM: BRO, N-terminal; KEGG: bbp:BBPR_0883 phage antirepressor protein.
Dde_2796 protein networkhttps://string-db.org/network/207559.Dde_2796PFAM: Phage P22, antirepressor protein, N-terminal; KEGG: lhk:LHK_01530 antirepressor protein.
Dde_2798 protein networkhttps://string-db.org/network/207559.Dde_2798PFAM: Heat shock protein Hsp20; KEGG: sfu:Sfum_2860 heat shock protein HSP20.
Dde_2799 protein networkhttps://string-db.org/network/207559.Dde_2799Phage regulatory protein, Rha family; KEGG: efa:EF2037 antirepressor, putative; TIGRFAM: Phage regulatory protein, Rha; PFAM: Phage regulatory protein, Rha-like.
Dde_2800 protein networkhttps://string-db.org/network/207559.Dde_2800PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: bpb:bpr_IV096 restriction endonuclease family protein.
Dde_2803 protein networkhttps://string-db.org/network/207559.Dde_2803Resolvase domain-containing protein; KEGG: dar:Daro_3523 resolvase, N-terminal:resolvase helix-turn-helix region; PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; SMART: Resolvase [...]
Dde_2804 protein networkhttps://string-db.org/network/207559.Dde_2804Hypothetical protein.
Dde_2805 protein networkhttps://string-db.org/network/207559.Dde_2805Prophage antirepressor; PFAM: BRO, N-terminal; KEGG: amu:Amuc_1367 prophage antirepressor.
Dde_2806 protein networkhttps://string-db.org/network/207559.Dde_2806KEGG: dba:Dbac_0897 phage regulatory protein, Rha family; TIGRFAM: Phage regulatory protein, Rha; PFAM: Phage regulatory protein, Rha-like.
Dde_2807 protein networkhttps://string-db.org/network/207559.Dde_2807PFAM: Staphylococcal nuclease (SNase-like); KEGG: vok:COSY_0067 nuclease.
Dde_2808 protein networkhttps://string-db.org/network/207559.Dde_2808PFAM: Magnesium chelatase, ChlI subunit; KEGG: dvm:DvMF_2719 competence protein ComM, putative.
Dde_2809 protein networkhttps://string-db.org/network/207559.Dde_2809KEGG: dap:Dacet_1948 hypothetical protein.
Dde_2810 protein networkhttps://string-db.org/network/207559.Dde_2810Hypothetical protein.
Dde_2811 protein networkhttps://string-db.org/network/207559.Dde_2811Hypothetical protein.
Dde_2814 protein networkhttps://string-db.org/network/207559.Dde_2814TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Haemerythrin/HHE cation-binding motif; KEGG: das:Daes_1051 hemerythrin-like [...]
Dde_2816 protein networkhttps://string-db.org/network/207559.Dde_2816TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: dvl:Dvul_2260 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family.
lepA protein networkhttps://string-db.org/network/207559.Dde_2817GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
Dde_2820 protein networkhttps://string-db.org/network/207559.Dde_2820PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: dma:DMR_01870 putative arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight.
Dde_2822 protein networkhttps://string-db.org/network/207559.Dde_2822Two component transcriptional regulator, LytTR family; KEGG: dvl:Dvul_2221 response regulator receiver protein; PFAM: LytTr DNA-binding region; SMART: LytTr DNA-binding region; Signal transductio [...]
Dde_2823 protein networkhttps://string-db.org/network/207559.Dde_2823TIGRFAM: Acetate--CoA ligase; KEGG: dvm:DvMF_2783 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase.
Dde_2825 protein networkhttps://string-db.org/network/207559.Dde_2825PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: dvl:Dvul_2226 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold [...]
Dde_2826 protein networkhttps://string-db.org/network/207559.Dde_2826TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; KEGG: dvm:DvMF_2778 PAS/PAC senso [...]
Dde_2827 protein networkhttps://string-db.org/network/207559.Dde_2827KEGG: dvl:Dvul_2228 UspA domain-containing protein.
Dde_2828 protein networkhttps://string-db.org/network/207559.Dde_2828KEGG: dvm:DvMF_2776 hypothetical protein.
Dde_2829 protein networkhttps://string-db.org/network/207559.Dde_2829PFAM: Major facilitator superfamily MFS-1; KEGG: dvl:Dvul_2230 major facilitator superfamily transporter.
Dde_2830 protein networkhttps://string-db.org/network/207559.Dde_2830AMMECR1 domain protein; KEGG: dma:DMR_28890 hypothetical protein; TIGRFAM: AMMECR1; PFAM: AMMECR1.
Dde_2831 protein networkhttps://string-db.org/network/207559.Dde_2831PFAM: Extracellular ligand-binding receptor; KEGG: dvm:DvMF_2773 extracellular ligand-binding receptor.
Dde_2832 protein networkhttps://string-db.org/network/207559.Dde_2832TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dvm:DvMF_2772 signal transduction his [...]
Dde_2833 protein networkhttps://string-db.org/network/207559.Dde_2833PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dvm:DvMF_2771 lysine exporter protein (LysE/YggA).
Dde_2834 protein networkhttps://string-db.org/network/207559.Dde_2834PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ppr:PBPRA2834 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
purN protein networkhttps://string-db.org/network/207559.Dde_2835Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
Dde_2836 protein networkhttps://string-db.org/network/207559.Dde_2836MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: dvm:DvMF_2768 MOSC domain containing protein.
Dde_2837 protein networkhttps://string-db.org/network/207559.Dde_2837TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: dvl:Dvul_2236 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III [...]
valS protein networkhttps://string-db.org/network/207559.Dde_2839valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
Dde_2840 protein networkhttps://string-db.org/network/207559.Dde_2840KEGG: dvm:DvMF_2764 hypothetical protein.
Dde_2841 protein networkhttps://string-db.org/network/207559.Dde_2841PFAM: Protein of unknown function DUF1848; KEGG: dvl:Dvul_2240 hypothetical protein.
Dde_2842 protein networkhttps://string-db.org/network/207559.Dde_2842KEGG: das:Daes_2194 hypothetical protein.
Dde_2843 protein networkhttps://string-db.org/network/207559.Dde_2843KEGG: dvl:Dvul_2241 hypothetical protein.
tgt protein networkhttps://string-db.org/network/207559.Dde_2844Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...]
Dde_2846 protein networkhttps://string-db.org/network/207559.Dde_2846PFAM: Protein of unknown function DUF218; KEGG: dsa:Desal_2506 hypothetical protein.
Dde_2848 protein networkhttps://string-db.org/network/207559.Dde_2848KEGG: dvm:DvMF_2759 protein of unknown function DUF255.
Dde_2849 protein networkhttps://string-db.org/network/207559.Dde_2849PFAM: Transposase, IS4-like; KEGG: pgi:PG0461 ISPg7, transposase.
Dde_2850 protein networkhttps://string-db.org/network/207559.Dde_2850KEGG: dvm:DvMF_2759 protein of unknown function DUF255.
Dde_2852 protein networkhttps://string-db.org/network/207559.Dde_2852KEGG: dvl:Dvul_2245 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter.
Dde_2853 protein networkhttps://string-db.org/network/207559.Dde_2853KEGG: dvl:Dvul_0612 hypothetical protein.
Dde_2854 protein networkhttps://string-db.org/network/207559.Dde_2854KEGG: dvm:DvMF_3044 hypothetical protein.
Dde_2855 protein networkhttps://string-db.org/network/207559.Dde_2855PFAM: Sulphate transporter; KEGG: dat:HRM2_13280 SulP1.
Dde_2856 protein networkhttps://string-db.org/network/207559.Dde_2856PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvm:DvMF_3043 protein of unknown function DUF6 transmembrane.
Dde_2857 protein networkhttps://string-db.org/network/207559.Dde_2857Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-4; HAMP linker domain; KEGG: dvm:DvMF_2712 methy [...]
Dde_2858 protein networkhttps://string-db.org/network/207559.Dde_2858KEGG: dvm:DvMF_2711 cytochrome c family protein.
Dde_2859 protein networkhttps://string-db.org/network/207559.Dde_2859PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_2862 protein networkhttps://string-db.org/network/207559.Dde_2862KEGG: das:Daes_2747 hypothetical protein.
Dde_2865 protein networkhttps://string-db.org/network/207559.Dde_2865Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: dma:DMR_07170 site-specific recombinase; Belongs to the 'phage' integrase family.
Dde_2866 protein networkhttps://string-db.org/network/207559.Dde_2866KEGG: pin:Ping_1894 hypothetical protein.
Dde_2867 protein networkhttps://string-db.org/network/207559.Dde_2867PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: glo:Glov_2140 filamentation induced by cAMP protein Fic.
Dde_2868 protein networkhttps://string-db.org/network/207559.Dde_2868PFAM: DNA methylase, adenine-specific; KEGG: kpn:KPN_pKPN4p07086 putative type I restriction-modification system DNA methylase.
Dde_2869 protein networkhttps://string-db.org/network/207559.Dde_2869Restriction modification system DNA specificity domain-containing protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: pap:PSPA7_0076 type I restriction-modification system su [...]
Dde_2870 protein networkhttps://string-db.org/network/207559.Dde_2870KEGG: kpn:KPN_pKPN4p07084 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, R [...]
Dde_2871 protein networkhttps://string-db.org/network/207559.Dde_2871PFAM: Transposase, IS204/IS1001/IS1096/IS1165; KEGG: kpn:KPN_pKPN4p07083 putative transposase.
Dde_2875 protein networkhttps://string-db.org/network/207559.Dde_2875KEGG: dvm:DvMF_2698 methyltransferase FkbM family.
Dde_2876 protein networkhttps://string-db.org/network/207559.Dde_2876PFAM: Glycosyl transferase, family 2; KEGG: rpt:Rpal_4471 glycosyl transferase family 2.
Dde_2877 protein networkhttps://string-db.org/network/207559.Dde_2877PFAM: Glycosyl transferase, family 11; KEGG: dvm:DvMF_2699 glycosyl transferase family 11.
Dde_2878 protein networkhttps://string-db.org/network/207559.Dde_2878PFAM: Protein of unknown function DUF268, Caenorhabditis species; KEGG: glo:Glov_2749 protein of unknown function DUF268.
Dde_2879 protein networkhttps://string-db.org/network/207559.Dde_2879PFAM: Glycosyl transferase, family 2; KEGG: sus:Acid_0612 glycosyl transferase family protein.
Dde_2880 protein networkhttps://string-db.org/network/207559.Dde_2880PFAM: Methyltransferase type 11; KEGG: dba:Dbac_3286 methyltransferase type 11.
Dde_2881 protein networkhttps://string-db.org/network/207559.Dde_2881KEGG: plt:Plut_1849 putative acetyltransferase.
Dde_2882 protein networkhttps://string-db.org/network/207559.Dde_2882KEGG: plt:Plut_1850 hypothetical protein.
Dde_2883 protein networkhttps://string-db.org/network/207559.Dde_2883KEGG: dba:Dbac_3282 sugar transferase.
Dde_2885 protein networkhttps://string-db.org/network/207559.Dde_2885PFAM: Glycosyl transferase, group 1; KEGG: sus:Acid_6620 glycosyl transferase, group 1.
Dde_2886 protein networkhttps://string-db.org/network/207559.Dde_2886TIGRFAM: Methyltransferase FkbM; KEGG: hhe:HH0182 hypothetical protein.
Dde_2887 protein networkhttps://string-db.org/network/207559.Dde_2887PFAM: Glycosyl transferase, group 1; KEGG: dba:Dbac_3288 glycosyl transferase group 1.
Dde_2888 protein networkhttps://string-db.org/network/207559.Dde_2888UDP-glucose 4-epimerase; KEGG: dba:Dbac_3287 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_2889 protein networkhttps://string-db.org/network/207559.Dde_2889PFAM: Glycosyl transferase, family 2; KEGG: dba:Dbac_3281 glycosyl transferase family 2.
Dde_2890 protein networkhttps://string-db.org/network/207559.Dde_2890PFAM: Glycosyl transferase, group 1; KEGG: gbm:Gbem_3442 group glycosyltransferase.
Dde_2891 protein networkhttps://string-db.org/network/207559.Dde_2891TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: nhl:Nhal_3235 exosortase 1 system-associated amidotransferase 1; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II.
Dde_2892 protein networkhttps://string-db.org/network/207559.Dde_2892PFAM: Methyltransferase type 11; KEGG: ppd:Ppro_1423 methyltransferase type 11.
Dde_2893 protein networkhttps://string-db.org/network/207559.Dde_2893Hypothetical protein; KEGG: dfe:Dfer_1961 O-methyltransferase family 3.
Dde_2894 protein networkhttps://string-db.org/network/207559.Dde_2894Methyltransferase FkbM family; KEGG: ret:RHE_CH00769 lipolysaccharide tri-O-methyl-fucosylation protein (SAM-dependent methyltransferase protein); TIGRFAM: Methyltransferase FkbM; PFAM: Protein-L [...]
Dde_2895 protein networkhttps://string-db.org/network/207559.Dde_2895Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; KEGG: geb:GM18_2481 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_2896 protein networkhttps://string-db.org/network/207559.Dde_2896PFAM: ABC-2 type transporter; KEGG: cyj:Cyan7822_5719 ABC-2 type transporter.
fcl-2 protein networkhttps://string-db.org/network/207559.Dde_2900GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
gmd-2 protein networkhttps://string-db.org/network/207559.Dde_2901GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
Dde_2903 protein networkhttps://string-db.org/network/207559.Dde_2903PFAM: Plasmid stabilisation system; KEGG: alv:Alvin_3289 plasmid stabilization system.
Dde_2904 protein networkhttps://string-db.org/network/207559.Dde_2904KEGG: rlg:Rleg_6360 transcriptional regulator, CopG family.
Dde_2906 protein networkhttps://string-db.org/network/207559.Dde_2906PFAM: Transposase IS3/IS911; KEGG: dsa:Desal_3639 transposase IS3/IS911 family protein.
Dde_2908 protein networkhttps://string-db.org/network/207559.Dde_2908KEGG: gme:Gmet_3281 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_2909 protein networkhttps://string-db.org/network/207559.Dde_2909PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix region; KEGG: gme:Gmet_3282 integrase catalytic subunit.
Dde_2910 protein networkhttps://string-db.org/network/207559.Dde_2910KEGG: dak:DaAHT2_1799 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote prote [...]
Dde_2911 protein networkhttps://string-db.org/network/207559.Dde_2911PFAM: Plasmid stabilisation system; KEGG: vsp:VS_1444 putative addiction module toxin; Belongs to the RelE toxin family.
Dde_2915 protein networkhttps://string-db.org/network/207559.Dde_2915PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: dhd:Dhaf_0086 filamentation induced by cAMP protein Fic.
Dde_2919 protein networkhttps://string-db.org/network/207559.Dde_2919Hypothetical protein.
Dde_2920 protein networkhttps://string-db.org/network/207559.Dde_2920SMART: von Willebrand factor, type A; KEGG: dvl:Dvul_2614 von Willebrand factor type A.
Dde_2921 protein networkhttps://string-db.org/network/207559.Dde_2921KEGG: dvl:Dvul_2612 hypothetical protein.
Dde_2922 protein networkhttps://string-db.org/network/207559.Dde_2922KEGG: dvl:Dvul_2608 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core.
Dde_2923 protein networkhttps://string-db.org/network/207559.Dde_2923KEGG: dvu:DVU2033 hypothetical protein.
Dde_2924 protein networkhttps://string-db.org/network/207559.Dde_2924ERF family protein; PFAM: ERF; KEGG: dvu:DVU2032 ERF family protein.
Dde_2926 protein networkhttps://string-db.org/network/207559.Dde_2926Hypothetical protein.
Dde_2927 protein networkhttps://string-db.org/network/207559.Dde_2927Hypothetical protein.
Dde_2928 protein networkhttps://string-db.org/network/207559.Dde_2928Hypothetical protein.
Dde_2929 protein networkhttps://string-db.org/network/207559.Dde_2929KEGG: dvm:DvMF_2693 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response re [...]
Dde_2930 protein networkhttps://string-db.org/network/207559.Dde_2930dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehy [...]
Dde_2931 protein networkhttps://string-db.org/network/207559.Dde_2931TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dvm:DvMF_2691 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphat [...]
Dde_2932 protein networkhttps://string-db.org/network/207559.Dde_2932KEGG: dvm:DvMF_2690 hypothetical protein.
Dde_2933 protein networkhttps://string-db.org/network/207559.Dde_2933PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; KEGG: dvl:Dvul_2269 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase [...]
Dde_2934 protein networkhttps://string-db.org/network/207559.Dde_2934PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_2270 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_2935 protein networkhttps://string-db.org/network/207559.Dde_2935KEGG: dvm:DvMF_2687 polysulphide reductase NrfD.
Dde_2939 protein networkhttps://string-db.org/network/207559.Dde_2939KEGG: dvl:Dvul_2272 hypothetical protein.
Dde_2940 protein networkhttps://string-db.org/network/207559.Dde_2940PFAM: Type IV pilus assembly PilZ; KEGG: dvm:DvMF_2668 type IV pilus assembly PilZ.
rnhA protein networkhttps://string-db.org/network/207559.Dde_2941Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
Dde_2942 protein networkhttps://string-db.org/network/207559.Dde_2942KEGG: dvm:DvMF_2670 hypothetical protein.
Dde_2943 protein networkhttps://string-db.org/network/207559.Dde_2943PFAM: Aldehyde ferredoxin oxidoreductase, C-terminal; Aldehyde ferredoxin oxidoreductase, N-terminal; KEGG: dvl:Dvul_2276 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreduc [...]
Dde_2944 protein networkhttps://string-db.org/network/207559.Dde_29444Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
Dde_2945 protein networkhttps://string-db.org/network/207559.Dde_2945PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutas [...]
Dde_2946 protein networkhttps://string-db.org/network/207559.Dde_2946HflK protein; HflC and HflK could encode or regulate a protease.
Dde_2947 protein networkhttps://string-db.org/network/207559.Dde_2947HflC protein; HflC and HflK could regulate a protease.
Dde_2949 protein networkhttps://string-db.org/network/207559.Dde_2949PFAM: Bacteriophage CI repressor; KEGG: dvm:DvMF_2676 putative phage repressor.
Dde_2950 protein networkhttps://string-db.org/network/207559.Dde_2950Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS; PFAM: Extracellular solute-binding protein, family 3; PAS fold; ATP-binding region, ATPase-like; Signal transduction h [...]
Dde_2951 protein networkhttps://string-db.org/network/207559.Dde_2951KEGG: dvm:DvMF_2678 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisatio [...]
Dde_2952 protein networkhttps://string-db.org/network/207559.Dde_2952KEGG: dvm:DvMF_2679 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver reg [...]
Dde_2953 protein networkhttps://string-db.org/network/207559.Dde_2953KEGG: dvm:DvMF_1317 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
Dde_2954 protein networkhttps://string-db.org/network/207559.Dde_2954PFAM: BioY protein; KEGG: dvl:Dvul_0476 BioY protein.
Dde_2955 protein networkhttps://string-db.org/network/207559.Dde_2955PFAM: Methyltransferase-16, putative; KEGG: dvl:Dvul_0475 hypothetical protein.
Dde_2956 protein networkhttps://string-db.org/network/207559.Dde_2956Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
folE2 protein networkhttps://string-db.org/network/207559.Dde_2957GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
Dde_2958 protein networkhttps://string-db.org/network/207559.Dde_2958PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; KEGG: dvl:Dvul_0472 hypothetical protein.
Dde_2959 protein networkhttps://string-db.org/network/207559.Dde_2959KEGG: dvm:DvMF_1324 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
Dde_2960 protein networkhttps://string-db.org/network/207559.Dde_2960Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; KEGG: dvm:DvMF_1325 TPR repeat-containing protein.
Dde_2961 protein networkhttps://string-db.org/network/207559.Dde_2961PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: dma:DMR_31670 hypothetical protein; Belongs to the MEMO1 family.
Dde_2963 protein networkhttps://string-db.org/network/207559.Dde_2963S-adenosylhomocysteine deaminase; KEGG: dvu:DVU2900 amidohydrolase family protein; PFAM: Amidohydrolase 1.
pyrB protein networkhttps://string-db.org/network/207559.Dde_2964TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: dvm:DvMF_1425 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Asp [...]
pyrC protein networkhttps://string-db.org/network/207559.Dde_2965Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family [...]
Dde_2966 protein networkhttps://string-db.org/network/207559.Dde_2966PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dvm:DvMF_1427 metal dependent phosphohydrolase.
rlmN protein networkhttps://string-db.org/network/207559.Dde_2967Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proo [...]
Dde_2968 protein networkhttps://string-db.org/network/207559.Dde_2968KEGG: dvm:DvMF_1501 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-a [...]
Dde_2972 protein networkhttps://string-db.org/network/207559.Dde_2972KEGG: dvm:DvMF_1432 hypothetical protein.
Dde_2973 protein networkhttps://string-db.org/network/207559.Dde_2973DNA-directed DNA polymerase; KEGG: dvu:DVU2906 UmuC protein; PFAM: DNA-repair protein, UmuC-like.
Dde_2974 protein networkhttps://string-db.org/network/207559.Dde_2974PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dvl:Dvul_0458 prophage repressor; Belongs to the peptidase S24 family.
Dde_2975 protein networkhttps://string-db.org/network/207559.Dde_2975KEGG: dvm:DvMF_1436 hypothetical protein.
Dde_2976 protein networkhttps://string-db.org/network/207559.Dde_2976KEGG: dsa:Desal_3517 hypothetical protein.
Dde_2977 protein networkhttps://string-db.org/network/207559.Dde_2977KEGG: dsa:Desal_3516 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
mntP protein networkhttps://string-db.org/network/207559.Dde_2978Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
Dde_2979 protein networkhttps://string-db.org/network/207559.Dde_2979PFAM: Carbonic anhydrase; KEGG: pca:Pcar_2939 carbonic anhydrase.
Dde_2980 protein networkhttps://string-db.org/network/207559.Dde_2980Hypothetical protein.
Dde_2981 protein networkhttps://string-db.org/network/207559.Dde_2981Hemolysin A; KEGG: dvl:Dvul_0454 hemolysin A; TIGRFAM: Haemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4.
rpmE protein networkhttps://string-db.org/network/207559.Dde_2982Ribosomal protein L31; Binds the 23S rRNA.
Dde_2983 protein networkhttps://string-db.org/network/207559.Dde_2983PFAM: Protein of unknown function DUF1385; KEGG: dvl:Dvul_0452 lipoprotein.
prfA protein networkhttps://string-db.org/network/207559.Dde_2984Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
prmC protein networkhttps://string-db.org/network/207559.Dde_2985protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally [...]
lpxC protein networkhttps://string-db.org/network/207559.Dde_2986UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A bi [...]
Dde_2988 protein networkhttps://string-db.org/network/207559.Dde_2988PFAM: Integrase, catalytic core; KEGG: swd:Swoo_3827 hypothetical protein.
tuf protein networkhttps://string-db.org/network/207559.Dde_2989Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
secE protein networkhttps://string-db.org/network/207559.Dde_2990Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
nusG protein networkhttps://string-db.org/network/207559.Dde_2991NusG antitermination factor; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/207559.Dde_2992Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/207559.Dde_2993Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplJ protein networkhttps://string-db.org/network/207559.Dde_2994Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein [...]
rplL protein networkhttps://string-db.org/network/207559.Dde_2995Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...]
rpoB protein networkhttps://string-db.org/network/207559.Dde_2997DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoC protein networkhttps://string-db.org/network/207559.Dde_2998DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
Dde_2999 protein networkhttps://string-db.org/network/207559.Dde_2999KEGG: dvm:DvMF_1457 hypothetical protein.
Dde_3000 protein networkhttps://string-db.org/network/207559.Dde_3000Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisat [...]
Dde_3001 protein networkhttps://string-db.org/network/207559.Dde_3001PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: dvl:Dvul_0435 hypothetical protein.
Dde_3002 protein networkhttps://string-db.org/network/207559.Dde_3002Putative PAS/PAC sensor protein; TIGRFAM: PAS; HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; PAS fold-4; KEGG: dvl:D [...]
Dde_3003 protein networkhttps://string-db.org/network/207559.Dde_3003KEGG: dvm:DvMF_1461 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver reg [...]
gpmA protein networkhttps://string-db.org/network/207559.Dde_3004Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
Dde_3005 protein networkhttps://string-db.org/network/207559.Dde_3005PFAM: Ion transport; KEGG: pca:Pcar_0515 ion transport protein.
Dde_3006 protein networkhttps://string-db.org/network/207559.Dde_3006KEGG: dvm:DvMF_1463 response regulator receiver protein; PFAM: Tetratricopeptide TPR2; Signal transduction response regulator, receiver region; Tetratricopeptide TPR-1; SMART: Signal transduction [...]
Dde_3007 protein networkhttps://string-db.org/network/207559.Dde_3007PFAM: Protein of unknown function DUF39; KEGG: dvm:DvMF_1464 protein of unknown function DUF39.
Dde_3008 protein networkhttps://string-db.org/network/207559.Dde_3008KEGG: dvu:DVU2939 hypothetical protein.
Dde_3010 protein networkhttps://string-db.org/network/207559.Dde_3010TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: drt:Dret_2465 regulatory protein, FmdB family; SMART: Regulatory protein, FmdB, putative.
Dde_3011 protein networkhttps://string-db.org/network/207559.Dde_3011KEGG: dvm:DvMF_1468 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal; Belongs to the lyase 1 family. Adenylosuccinate lyase subfam [...]
pyrE protein networkhttps://string-db.org/network/207559.Dde_3012Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
Dde_3013 protein networkhttps://string-db.org/network/207559.Dde_3013PFAM: YkuD domain; KEGG: dvm:DvMF_1470 ErfK/YbiS/YcfS/YnhG family protein.
Dde_3014 protein networkhttps://string-db.org/network/207559.Dde_3014KEGG: dsa:Desal_3226 hypothetical protein.
Dde_3015 protein networkhttps://string-db.org/network/207559.Dde_3015KEGG: dvm:DvMF_1472 hypothetical protein.
Dde_3016 protein networkhttps://string-db.org/network/207559.Dde_3016TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; KEGG: dvl:Dvul_0421 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone.
Dde_3018 protein networkhttps://string-db.org/network/207559.Dde_3018Flagellin domain protein; PFAM: Flagellin, N-terminal; KEGG: dvm:DvMF_1474 flagellin domain protein.
Dde_3019 protein networkhttps://string-db.org/network/207559.Dde_3019PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dvu:DVU3081 hypothetical protein.
Dde_3020 protein networkhttps://string-db.org/network/207559.Dde_3020Methyl-accepting chemotaxis sensory transducer with Cache sensor; KEGG: dvu:DVU2309 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker [...]
Dde_3021 protein networkhttps://string-db.org/network/207559.Dde_3021PFAM: Nitroreductase-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_1631 nitroreductase.
Dde_3022 protein networkhttps://string-db.org/network/207559.Dde_3022TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: dsa:Desal_0927 diguanylate cyclase/phosphodiesterase; SMART: Diguany [...]
Dde_3023 protein networkhttps://string-db.org/network/207559.Dde_3023PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dae:Dtox_2803 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_3024 protein networkhttps://string-db.org/network/207559.Dde_3024PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_04843 histone acetyltransferase HPA2-like acetyltransferase.
Dde_3025 protein networkhttps://string-db.org/network/207559.Dde_3025KEGG: dvm:DvMF_1577 hypothetical protein.
Dde_3026 protein networkhttps://string-db.org/network/207559.Dde_3026Hypothetical protein.
Dde_3027 protein networkhttps://string-db.org/network/207559.Dde_3027KEGG: dsa:Desal_2509 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding.
Dde_3028 protein networkhttps://string-db.org/network/207559.Dde_3028TIGRFAM: Carbon-monoxide dehydrogenase, catalytic subunit; KEGG: das:Daes_0529 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
Dde_3029 protein networkhttps://string-db.org/network/207559.Dde_3029KEGG: das:Daes_0528 cobyrinic acid ac-diamide synthase.
Dde_3030 protein networkhttps://string-db.org/network/207559.Dde_3030KEGG: das:Daes_0632 hypothetical protein.
Dde_3031 protein networkhttps://string-db.org/network/207559.Dde_3031KEGG: das:Daes_0633 hypothetical protein.
Dde_3032 protein networkhttps://string-db.org/network/207559.Dde_3032KEGG: das:Daes_0634 hypothetical protein.
Dde_3033 protein networkhttps://string-db.org/network/207559.Dde_3033Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: das:Daes_0635 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
Dde_3034 protein networkhttps://string-db.org/network/207559.Dde_3034KEGG: das:Daes_0636 L-serine ammonia-lyase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain.
Dde_3035 protein networkhttps://string-db.org/network/207559.Dde_3035TIGRFAM: Methyltransferase FkbM; KEGG: aeh:Mlg_0699 FkbM family methyltransferase.
Dde_3036 protein networkhttps://string-db.org/network/207559.Dde_3036PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: dba:Dbac_0902 protein of unknown function DUF21.
Dde_3038 protein networkhttps://string-db.org/network/207559.Dde_3038TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dal:Dalk_0185 signal transd [...]
Dde_3039 protein networkhttps://string-db.org/network/207559.Dde_3039PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; KEGG: pca:Pcar_0937 pyruvate-formate lyase.
Dde_3040 protein networkhttps://string-db.org/network/207559.Dde_3040KEGG: dap:Dacet_0801 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; Signal transduction [...]
Dde_3041 protein networkhttps://string-db.org/network/207559.Dde_3041Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Protein of unknown function DUF160; KEGG: sfu:Sfum_0711 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM.
Dde_3042 protein networkhttps://string-db.org/network/207559.Dde_3042D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
Dde_3043 protein networkhttps://string-db.org/network/207559.Dde_3043KEGG: sfu:Sfum_0713 D-alanine--D-alanine ligase domain-containing protein.
Dde_3044 protein networkhttps://string-db.org/network/207559.Dde_3044PFAM: GCN5-related N-acetyltransferase; KEGG: psl:Psta_3376 GCN5-like N-acetyltransferase.
Dde_3045 protein networkhttps://string-db.org/network/207559.Dde_3045PFAM: Domain of unknown function DUF1987; KEGG: das:Daes_1898 hypothetical protein.
Dde_3046 protein networkhttps://string-db.org/network/207559.Dde_3046KEGG: das:Daes_1899 hypothetical protein.
Dde_3047 protein networkhttps://string-db.org/network/207559.Dde_3047Protein serine/threonine phosphatase; KEGG: das:Daes_1900 stage II sporulation protein E; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related.
Dde_3048 protein networkhttps://string-db.org/network/207559.Dde_3048Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; KEGG: das:Daes_1901 diguanylate cyclase; SMART: Diguanylate cyclase, p [...]
Dde_3051 protein networkhttps://string-db.org/network/207559.Dde_3051KEGG: aoe:Clos_0085 PAS modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; PAS.
Dde_3053 protein networkhttps://string-db.org/network/207559.Dde_3053PFAM: Major facilitator superfamily MFS-1; KEGG: cbt:CLH_1870 transporter, major facilitator family.
Dde_3054 protein networkhttps://string-db.org/network/207559.Dde_3054Glycyl-radical enzyme activating protein family; TIGRFAM: Glycyl radical enzyme-activating; KEGG: pth:PTH_2421 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM; 4Fe-4S ferredoxin, iron [...]
Dde_3055 protein networkhttps://string-db.org/network/207559.Dde_3055PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; KEGG: cno:NT01CX_1220 pyruvate formate-lyase.
Dde_3058 protein networkhttps://string-db.org/network/207559.Dde_3058KEGG: dvm:DvMF_1310 FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; Belongs to the folylpolyglutamate synthase family.
selA protein networkhttps://string-db.org/network/207559.Dde_3059L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
Dde_3060 protein networkhttps://string-db.org/network/207559.Dde_3060UDP-glucuronate decarboxylase; KEGG: dvm:DvMF_1312 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_3061 protein networkhttps://string-db.org/network/207559.Dde_3061KEGG: dvl:Dvul_0481 aminopeptidase 1; PFAM: Peptidase M18, aminopeptidase I.
Dde_3062 protein networkhttps://string-db.org/network/207559.Dde_3062Alcohol dehydrogenase; KEGG: dvm:DvMF_1315 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_3063 protein networkhttps://string-db.org/network/207559.Dde_3063KEGG: dvl:Dvul_0123 hypothetical protein.
Dde_3064 protein networkhttps://string-db.org/network/207559.Dde_3064Ribonuclease BN; KEGG: dvm:DvMF_2681 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related.
Dde_3065 protein networkhttps://string-db.org/network/207559.Dde_3065KEGG: dvm:DvMF_2682 membrane-bound lytic murein transglycosylase B-like protein.
Dde_3068 protein networkhttps://string-db.org/network/207559.Dde_3068KEGG: dsa:Desal_1163 response regulator receiver modulated CheW protein; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; SMART: Signal transduction response regu [...]
Dde_3069 protein networkhttps://string-db.org/network/207559.Dde_3069KEGG: dvl:Dvul_2286 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
Dde_3070 protein networkhttps://string-db.org/network/207559.Dde_3070ABC-type transporter, periplasmic subunit family 3; KEGG: dvm:DvMF_2685 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular s [...]
Dde_3071 protein networkhttps://string-db.org/network/207559.Dde_3071KEGG: dvm:DvMF_2686 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depe [...]
Dde_3072 protein networkhttps://string-db.org/network/207559.Dde_3072Protein of unknown function UPF0047; KEGG: dma:DMR_26240 hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0047; PFAM: Uncharacterized protein family UPF0047.
Dde_3074 protein networkhttps://string-db.org/network/207559.Dde_3074Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-4; HAMP linker domain; KEGG: dvm:DvMF_2663 methy [...]
Dde_3076 protein networkhttps://string-db.org/network/207559.Dde_3076KEGG: dvl:Dvul_2294 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_3077 protein networkhttps://string-db.org/network/207559.Dde_3077KEGG: dvm:DvMF_2661 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_3078 protein networkhttps://string-db.org/network/207559.Dde_3078Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
Dde_3079 protein networkhttps://string-db.org/network/207559.Dde_3079Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
Dde_3080 protein networkhttps://string-db.org/network/207559.Dde_3080TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: dvm:DvMF_2658 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Belongs to the cysteine synthase/cystathionin [...]
Dde_3081 protein networkhttps://string-db.org/network/207559.Dde_3081KEGG: dvm:DvMF_2657 serine O-acetyltransferase.
Dde_3083 protein networkhttps://string-db.org/network/207559.Dde_3083PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvm:DvMF_2656 glyoxalase/bleomycin resistance protein/dioxygenase.
Dde_3084 protein networkhttps://string-db.org/network/207559.Dde_3084PFAM: Metal-dependent hydrolase HDOD; Diguanylate phosphodiesterase, predicted; KEGG: dma:DMR_45880 hypothetical protein.
Dde_3085 protein networkhttps://string-db.org/network/207559.Dde_3085KEGG: din:Selin_1790 hypothetical protein.
Dde_3086 protein networkhttps://string-db.org/network/207559.Dde_3086Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; KEGG: drt:Dret_0673 cobalamin B12-binding domain-containing protein.
Dde_3087 protein networkhttps://string-db.org/network/207559.Dde_3087TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: drt:Dret_0674 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_3088 protein networkhttps://string-db.org/network/207559.Dde_3088Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in [...]
Dde_3089 protein networkhttps://string-db.org/network/207559.Dde_3089Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; B [...]
Dde_3090 protein networkhttps://string-db.org/network/207559.Dde_3090KEGG: shi:Shel_06370 phosphoesterase, MJ0936 family; TIGRFAM: Uncharacterized protein family UPF0025; PFAM: Metallophosphoesterase.
Dde_3091 protein networkhttps://string-db.org/network/207559.Dde_3091PFAM: Heat shock protein Hsp20; KEGG: dvl:Dvul_2302 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_3092 protein networkhttps://string-db.org/network/207559.Dde_3092PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_2648 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_3093 protein networkhttps://string-db.org/network/207559.Dde_3093PFAM: Protein of unknown function DUF343; KEGG: dvm:DvMF_2647 protein of unknown function DUF343; Belongs to the UPF0434 family.
Dde_3094 protein networkhttps://string-db.org/network/207559.Dde_3094PHP domain protein; KEGG: dvl:Dvul_2305 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal.
Dde_3095 protein networkhttps://string-db.org/network/207559.Dde_3095PFAM: Peptidase U32; KEGG: dvm:DvMF_2645 peptidase U32.
Dde_3096 protein networkhttps://string-db.org/network/207559.Dde_3096PAS sensor protein; TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; PAS fold; KEGG: sfu:Sfum_2379 multi-sensor hybrid histidine kinase; SMART: Signal transduction res [...]
Dde_3097 protein networkhttps://string-db.org/network/207559.Dde_3097Putative two component, sigma54 specific, transcriptional regulator; KEGG: dvu:DVU0653 sigma-54 dependent transcriptional regulator/response regulator; PFAM: RNA polymerase sigma factor 54, inter [...]
Dde_3100 protein networkhttps://string-db.org/network/207559.Dde_3100KEGG: dvl:Dvul_2308 CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver regi [...]
Dde_3101 protein networkhttps://string-db.org/network/207559.Dde_3101PFAM: PAS fold; KEGG: ppd:Ppro_1622 putative PAS/PAC sensor protein.
Dde_3102 protein networkhttps://string-db.org/network/207559.Dde_3102PFAM: Nucleoside recognition; KEGG: dvu:DVU0651 hypothetical protein.
Dde_3103 protein networkhttps://string-db.org/network/207559.Dde_3103Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.
Dde_3104 protein networkhttps://string-db.org/network/207559.Dde_3104ABC-type transporter, integral membrane subunit; PFAM: Bacterial transport system permease protein; KEGG: dsa:Desal_2306 ABC transporter permease; Belongs to the binding-protein-dependent transpo [...]
Dde_3105 protein networkhttps://string-db.org/network/207559.Dde_3105Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvu:DVU0648 iron compound ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_3106 protein networkhttps://string-db.org/network/207559.Dde_3106ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: dvm:DvMF_1499 periplasmic binding protein.
Dde_3107 protein networkhttps://string-db.org/network/207559.Dde_3107Precorrin-2 C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; KEGG: dvl:Dvul_2314 precorrin-2 C20-methyltransferase; PFAM: T [...]
Dde_3108 protein networkhttps://string-db.org/network/207559.Dde_3108KEGG: acd:AOLE_16005 hypothetical protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein.
Dde_3109 protein networkhttps://string-db.org/network/207559.Dde_3109Protein of unknown function DUF124; KEGG: sfr:Sfri_2324 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124.
Dde_3111 protein networkhttps://string-db.org/network/207559.Dde_3111L-serine ammonia-lyase; KEGG: dsa:Desal_2312 serine dehydratase alpha chain; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine deh [...]
Dde_3112 protein networkhttps://string-db.org/network/207559.Dde_3112KEGG: dsa:Desal_0351 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
Dde_3113 protein networkhttps://string-db.org/network/207559.Dde_3113PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; PAS fold-3; KEGG: dvl:Dvul_2248 multi-sensor signal transduction histidine ki [...]
Dde_3114 protein networkhttps://string-db.org/network/207559.Dde_3114KEGG: dsa:Desal_1454 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, [...]
Dde_3115 protein networkhttps://string-db.org/network/207559.Dde_3115PFAM: Carboxymuconolactone decarboxylase; KEGG: mca:MCA0351 carboxymuconolactone decarboxylase domain-containing protein.
mobA-2 protein networkhttps://string-db.org/network/207559.Dde_3116Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine din [...]
Dde_3117 protein networkhttps://string-db.org/network/207559.Dde_3117KEGG: dvl:Dvul_2321 hypothetical protein.
Dde_3118 protein networkhttps://string-db.org/network/207559.Dde_3118KEGG: dvm:DvMF_2635 hypothetical protein.
Dde_3119 protein networkhttps://string-db.org/network/207559.Dde_3119PFAM: Thiamine biosynthesis Thi4 protein; FAD dependent oxidoreductase; KEGG: dvm:DvMF_2634 FAD dependent oxidoreductase.
Dde_3121 protein networkhttps://string-db.org/network/207559.Dde_3121KEGG: bsu:BSU37960 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
Dde_3122 protein networkhttps://string-db.org/network/207559.Dde_3122PFAM: Glycosyl transferase, family 39; KEGG: dvm:DvMF_2632 dolichyl-phosphate-mannose-protein mannosyltransferase family protein.
Dde_3123 protein networkhttps://string-db.org/network/207559.Dde_3123KEGG: dvm:DvMF_2631 hypothetical protein.
Dde_3124 protein networkhttps://string-db.org/network/207559.Dde_3124TIGRFAM: Penicillin-binding protein 1A; KEGG: dvm:DvMF_2630 penicillin-binding protein, 1A family; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
Dde_3125 protein networkhttps://string-db.org/network/207559.Dde_3125TIGRFAM: Conserved hypothetical protein CHP02231; KEGG: dvm:DvMF_2628 hypothetical protein.
Dde_3126 protein networkhttps://string-db.org/network/207559.Dde_3126Alcohol dehydrogenase; KEGG: cpo:COPRO5265_1098 NADH-dependent butanol dehydrogenase A (bdh i); PFAM: Alcohol dehydrogenase, iron-type.
Dde_3127 protein networkhttps://string-db.org/network/207559.Dde_3127Regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dvm:DvMF_2627 transcriptional regulator, TetR family.
buk protein networkhttps://string-db.org/network/207559.Dde_3128TIGRFAM: Butyrate kinase; KEGG: dvl:Dvul_2330 butyrate kinase; PFAM: Acetate/butyrate kinase; Belongs to the acetokinase family.
Dde_3129 protein networkhttps://string-db.org/network/207559.Dde_3129KEGG: dvm:DvMF_2625 phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase.
Dde_3130 protein networkhttps://string-db.org/network/207559.Dde_3130KEGG: dvm:DvMF_2624 acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT.
Dde_3132 protein networkhttps://string-db.org/network/207559.Dde_3132Hypothetical protein.
Dde_3133 protein networkhttps://string-db.org/network/207559.Dde_3133Rhodanese-like protein; KEGG: ica:Intca_0161 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
ahcY protein networkhttps://string-db.org/network/207559.Dde_3134Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
Dde_3135 protein networkhttps://string-db.org/network/207559.Dde_3135KEGG: dvm:DvMF_2579 transcriptional regulator, ArsR family; PFAM: Methyltransferase type 11; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
Dde_3136 protein networkhttps://string-db.org/network/207559.Dde_3136PFAM: Protein of unknown function DUF721; KEGG: dvl:Dvul_2350 hypothetical protein.
Dde_3137 protein networkhttps://string-db.org/network/207559.Dde_3137KEGG: dsa:Desal_3558 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator, N-terminal; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain.
Dde_3138 protein networkhttps://string-db.org/network/207559.Dde_3138KEGG: dsa:Desal_3560 membrane protein.
Dde_3139 protein networkhttps://string-db.org/network/207559.Dde_3139KEGG: ddc:Dd586_2070 cupin 2 conserved barrel domain-containing protein.
Dde_3140 protein networkhttps://string-db.org/network/207559.Dde_3140PFAM: Carboxymuconolactone decarboxylase; KEGG: dsa:Desal_3563 carboxymuconolactone decarboxylase.
Dde_3141 protein networkhttps://string-db.org/network/207559.Dde_3141PFAM: NADPH-dependent FMN reductase; KEGG: mac:MA0418 iron-sulfur flavoprotein.
Dde_3142 protein networkhttps://string-db.org/network/207559.Dde_3142KEGG: dsa:Desal_3565 hypothetical protein.
Dde_3144 protein networkhttps://string-db.org/network/207559.Dde_3144Hypothetical protein.
Dde_3146 protein networkhttps://string-db.org/network/207559.Dde_3146Hypothetical protein.
Dde_3148 protein networkhttps://string-db.org/network/207559.Dde_3148ABC-type transporter, periplasmic subunit family 3; PFAM: Extracellular solute-binding protein, family 3; KEGG: asa:ASA_4264 hypothetical protein.
fliW protein networkhttps://string-db.org/network/207559.Dde_3149Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and partici [...]
csrA protein networkhttps://string-db.org/network/207559.Dde_3150Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequ [...]
Dde_3151 protein networkhttps://string-db.org/network/207559.Dde_3151KEGG: dvm:DvMF_2525 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal.
Dde_3152 protein networkhttps://string-db.org/network/207559.Dde_3152KEGG: dvm:DvMF_2524 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod prote [...]
Dde_3153 protein networkhttps://string-db.org/network/207559.Dde_3153FlgN family protein; PFAM: FlgN; KEGG: dvm:DvMF_2523 FlgN family protein.
Dde_3154 protein networkhttps://string-db.org/network/207559.Dde_3154PFAM: Peptidase M23; Flagellar protein FlgJ, N-terminal; KEGG: dma:DMR_31520 peptidase M23B family protein.
flgI protein networkhttps://string-db.org/network/207559.Dde_3155Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
flgH protein networkhttps://string-db.org/network/207559.Dde_3156Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
Dde_3157 protein networkhttps://string-db.org/network/207559.Dde_3157KEGG: dvm:DvMF_2519 flagella basal body P-ring formation protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain.
Dde_3158 protein networkhttps://string-db.org/network/207559.Dde_3158KEGG: dvl:Dvul_2428 flagellar basal body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-termina [...]
Dde_3159 protein networkhttps://string-db.org/network/207559.Dde_3159KEGG: dvl:Dvul_2429 hypothetical protein; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknow [...]
rimP protein networkhttps://string-db.org/network/207559.Dde_3160Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
nusA protein networkhttps://string-db.org/network/207559.Dde_3161NusA antitermination factor; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/207559.Dde_3162Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
Dde_3163 protein networkhttps://string-db.org/network/207559.Dde_3163PFAM: Protein of unknown function DUF503; KEGG: dvm:DvMF_2512 protein of unknown function DUF503.
Dde_3164 protein networkhttps://string-db.org/network/207559.Dde_3164PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: dvu:DVU0506 DHH family protein.
truB protein networkhttps://string-db.org/network/207559.Dde_3165tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
rpsO protein networkhttps://string-db.org/network/207559.Dde_3166Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several [...]
pnp protein networkhttps://string-db.org/network/207559.Dde_3167Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rsgA protein networkhttps://string-db.org/network/207559.Dde_3170Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May [...]
Dde_3171 protein networkhttps://string-db.org/network/207559.Dde_3171PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_2795 acetyltransferase.
Dde_3173 protein networkhttps://string-db.org/network/207559.Dde_3173TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; KEGG: dvm:DvMF_2506 selenocysteine-specific translation elongation factor; PFAM: Protein synthesis fact [...]
Dde_3174 protein networkhttps://string-db.org/network/207559.Dde_3174ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: chy:CHY_1128 oligopeptide/dipeptide ABC transporter peptide-binding protein.
Dde_3175 protein networkhttps://string-db.org/network/207559.Dde_3175Protein of unknown function UPF0047; KEGG: das:Daes_3009 hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0047; PFAM: Uncharacterized protein family UPF0047.
Dde_3176 protein networkhttps://string-db.org/network/207559.Dde_3176AzlC family protein; PFAM: AzlC-like; KEGG: geb:GM18_0371 AzlC family protein.
Dde_3177 protein networkhttps://string-db.org/network/207559.Dde_3177PFAM: Branched-chain amino acid transport; KEGG: geb:GM18_0372 branched-chain amino acid transport.
gpsA protein networkhttps://string-db.org/network/207559.Dde_3178PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; KEGG: dvl:Dvul_0226 NAD(P)H-dependent glycerol-3-phosphate dehydr [...]
Dde_3179 protein networkhttps://string-db.org/network/207559.Dde_3179Putative heme biosynthesis protein; SMART: Transcription regulator, AsnC-type; KEGG: dvm:DvMF_2503 putative transcriptional regulator, AsnC family.
hemL protein networkhttps://string-db.org/network/207559.Dde_3180Glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: dvl:Dvul_0218 glutamate-1-semialdehyde aminotransferase; PFAM: Amino [...]
Dde_3181 protein networkhttps://string-db.org/network/207559.Dde_3181precorrin-3B C17-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: cag:Cagg_1264 precorrin-3B C17-methyltransferase; PFAM [...]
Dde_3182 protein networkhttps://string-db.org/network/207559.Dde_3182PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_0215 cytochrome c class III.
Dde_3183 protein networkhttps://string-db.org/network/207559.Dde_3183KEGG: dvu:DVU3172 hypothetical protein.
Dde_3184 protein networkhttps://string-db.org/network/207559.Dde_3184KEGG: dvl:Dvul_0213 hypothetical protein.
ubiE protein networkhttps://string-db.org/network/207559.Dde_3185Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methox [...]
Dde_3186 protein networkhttps://string-db.org/network/207559.Dde_3186PFAM: Protein of unknown function DUF2065.
Dde_3187 protein networkhttps://string-db.org/network/207559.Dde_3187TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, [...]
mqnB protein networkhttps://string-db.org/network/207559.Dde_3188Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
Dde_3189 protein networkhttps://string-db.org/network/207559.Dde_3189Trans-hexaprenyltranstransferase; KEGG: dvu:DVU3179 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
Dde_3190 protein networkhttps://string-db.org/network/207559.Dde_3190Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Metal-dependent hydrolase HDOD; Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: dvm:DvMF_2489 d [...]
purL protein networkhttps://string-db.org/network/207559.Dde_3191Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of [...]
dfx protein networkhttps://string-db.org/network/207559.Dde_3193Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via [...]
Dde_3194 protein networkhttps://string-db.org/network/207559.Dde_3194PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvm:DvMF_2480 rubredoxin-type Fe(Cys)4 protein.
Dde_3195 protein networkhttps://string-db.org/network/207559.Dde_3195PFAM: Flavodoxin/nitric oxide synthase; KEGG: dvm:DvMF_2479 beta-lactamase domain protein.
Dde_3196 protein networkhttps://string-db.org/network/207559.Dde_3196PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: drt:Dret_0447 pu [...]
Dde_3197 protein networkhttps://string-db.org/network/207559.Dde_3197KEGG: dsa:Desal_0622 hypothetical protein.
Dde_3198 protein networkhttps://string-db.org/network/207559.Dde_3198PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: drt:Dret_0445 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
Dde_3199 protein networkhttps://string-db.org/network/207559.Dde_3199Hypothetical protein.
Dde_3200 protein networkhttps://string-db.org/network/207559.Dde_3200PFAM: Cobyrinic acid a,c-diamide synthase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_0442 cobyrinic acid ac-diamide synthase.
Dde_3201 protein networkhttps://string-db.org/network/207559.Dde_3201PFAM: Cobyrinic acid a,c-diamide synthase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_0441 cobyrinic acid ac-diamide synthase.
Dde_3202 protein networkhttps://string-db.org/network/207559.Dde_3202ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Dde_3204 protein networkhttps://string-db.org/network/207559.Dde_3204PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: dvu:DVU3271 cytochrome d ubiquinol oxidase subunit I.
Dde_3205 protein networkhttps://string-db.org/network/207559.Dde_3205KEGG: dvm:DvMF_2472 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II.
Dde_3206 protein networkhttps://string-db.org/network/207559.Dde_3206TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; KEGG: das:Daes_2438 PAS sensor protein; SMA [...]
acsA protein networkhttps://string-db.org/network/207559.Dde_3207acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. [...]
Dde_3208 protein networkhttps://string-db.org/network/207559.Dde_3208PFAM: GCN5-related N-acetyltransferase; CoA-binding; KEGG: dvm:DvMF_1776 GCN5-related N-acetyltransferase.
Dde_3209 protein networkhttps://string-db.org/network/207559.Dde_3209KEGG: dbr:Deba_1105 hypothetical protein.
Dde_3211 protein networkhttps://string-db.org/network/207559.Dde_3211KEGG: dvm:DvMF_0305 split soret cytochrome c precursor.
cheD protein networkhttps://string-db.org/network/207559.Dde_3212CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
Dde_3213 protein networkhttps://string-db.org/network/207559.Dde_3213KEGG: dvl:Dvul_0397 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
Dde_3214 protein networkhttps://string-db.org/network/207559.Dde_3214PFAM: Protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: dvl:Dvul_0395 hypothetical protein.
Dde_3215 protein networkhttps://string-db.org/network/207559.Dde_3215PFAM: Haloacid dehalogenase-like hydrolase; KEGG: dvm:DvMF_1787 haloacid dehalogenase domain protein hydrolase.
psd protein networkhttps://string-db.org/network/207559.Dde_3216Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
Dde_3217 protein networkhttps://string-db.org/network/207559.Dde_3217KEGG: dvm:DvMF_1790 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the C [...]
leuA protein networkhttps://string-db.org/network/207559.Dde_32182-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...]
leuC protein networkhttps://string-db.org/network/207559.Dde_3219Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
leuD protein networkhttps://string-db.org/network/207559.Dde_32203-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
Dde_3221 protein networkhttps://string-db.org/network/207559.Dde_3221PFAM: Domain of unknown function DUF89; KEGG: dvl:Dvul_0388 hypothetical protein.
leuB protein networkhttps://string-db.org/network/207559.Dde_32223-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
Dde_3223 protein networkhttps://string-db.org/network/207559.Dde_3223PFAM: Extracellular solute-binding protein, family 3; KEGG: asa:ASA_2076 ABC-type amino acid transporter, periplasmic binding protein.
Dde_3224 protein networkhttps://string-db.org/network/207559.Dde_3224KEGG: dvm:DvMF_1801 phage shock protein C, PspC; TIGRFAM: Phage shock protein C; PFAM: PspC.
Dde_3225 protein networkhttps://string-db.org/network/207559.Dde_3225TIGRFAM: Phage shock B; KEGG: dvm:DvMF_1800 phage shock protein B.
Dde_3226 protein networkhttps://string-db.org/network/207559.Dde_3226KEGG: dvm:DvMF_1799 phage shock protein A, PspA; TIGRFAM: Phage shock protein A; PFAM: PspA/IM30.
Dde_3227 protein networkhttps://string-db.org/network/207559.Dde_3227Sigma54 specific transcriptional activator, PspF, Fis family; TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: dbr:Deba_ [...]
Dde_3228 protein networkhttps://string-db.org/network/207559.Dde_3228Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Dde_3229 protein networkhttps://string-db.org/network/207559.Dde_3229YbhB YbcL family protein; KEGG: rci:RCIX127 hypothetical protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP.
Dde_3230 protein networkhttps://string-db.org/network/207559.Dde_3230KEGG: dvm:DvMF_1856 hypothetical protein.
Dde_3231 protein networkhttps://string-db.org/network/207559.Dde_3231Putative signal transduction protein; KEGG: dsa:Desal_0673 metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD.
Dde_3232 protein networkhttps://string-db.org/network/207559.Dde_3232KEGG: dvm:DvMF_1857 hypothetical protein.
Dde_3233 protein networkhttps://string-db.org/network/207559.Dde_3233Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold-4; PAS fold; Signal transduction histi [...]
Dde_3234 protein networkhttps://string-db.org/network/207559.Dde_3234KEGG: dvm:DvMF_1859 putative two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, rec [...]
Dde_3237 protein networkhttps://string-db.org/network/207559.Dde_3237SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PF [...]
Dde_3238 protein networkhttps://string-db.org/network/207559.Dde_3238L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
Dde_3239 protein networkhttps://string-db.org/network/207559.Dde_3239D-lactate dehydrogenase (cytochrome); KEGG: dvm:DvMF_1862 FAD linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
Dde_3240 protein networkhttps://string-db.org/network/207559.Dde_3240Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0345 hypothetical protei [...]
Dde_3241 protein networkhttps://string-db.org/network/207559.Dde_3241Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
ackA protein networkhttps://string-db.org/network/207559.Dde_3242Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
Dde_3243 protein networkhttps://string-db.org/network/207559.Dde_3243DRTGG domain protein; PFAM: DRTGG; KEGG: dvm:DvMF_1866 DRTGG domain protein.
Dde_3244 protein networkhttps://string-db.org/network/207559.Dde_3244Lactate utilization protein B/C; PFAM: Protein of unknown function DUF162; KEGG: dvl:Dvul_0341 hypothetical protein.
Dde_3245 protein networkhttps://string-db.org/network/207559.Dde_3245Lactate utilization protein B/C; PFAM: Protein of unknown function DUF162; Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0340 hypothetical protein.
Dde_3246 protein networkhttps://string-db.org/network/207559.Dde_3246KEGG: dvl:Dvul_0339 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting r [...]
Dde_3247 protein networkhttps://string-db.org/network/207559.Dde_3247PFAM: Protein of unknown function DUF362; KEGG: dvm:DvMF_1870 protein of unknown function DUF362.
Dde_3248 protein networkhttps://string-db.org/network/207559.Dde_3248Rhodanese-like protein; KEGG: dvl:Dvul_0337 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
Dde_3249 protein networkhttps://string-db.org/network/207559.Dde_3249Acetyltransferase; KEGG: dvm:DvMF_1843 acetyltransferase.
Dde_3250 protein networkhttps://string-db.org/network/207559.Dde_3250PFAM: Polysaccharide deacetylase; KEGG: dvm:DvMF_1847 polysaccharide deacetylase.
Dde_3251 protein networkhttps://string-db.org/network/207559.Dde_3251KEGG: dvm:DvMF_1848 hypothetical protein.
Dde_3252 protein networkhttps://string-db.org/network/207559.Dde_3252KEGG: dvm:DvMF_1849 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_3253 protein networkhttps://string-db.org/network/207559.Dde_3253KEGG: dvm:DvMF_1850 capsule polysaccharide biosynthesis protein.
Dde_3254 protein networkhttps://string-db.org/network/207559.Dde_3254PFAM: Methyltransferase type 11; KEGG: dvm:DvMF_1851 methyltransferase type 11.
Dde_3255 protein networkhttps://string-db.org/network/207559.Dde_3255TIGRFAM: UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; KEGG: dvm:DvMF_1846 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase.
Dde_3256 protein networkhttps://string-db.org/network/207559.Dde_3256PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain; KEGG: dvm:DvMF_1845 N-acylneuraminate-9-phosphate synthase; SMART: SAF domain.
Dde_3257 protein networkhttps://string-db.org/network/207559.Dde_3257KEGG: dvm:DvMF_1844 acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase.
Dde_3261 protein networkhttps://string-db.org/network/207559.Dde_3261KEGG: dvm:DvMF_1869 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache, type 2; SMART: Chemotaxis [...]
Dde_3263 protein networkhttps://string-db.org/network/207559.Dde_3263Sigma 54 interacting domain protein; PFAM: Ethanolamine/propanediol utilisation protein, EutP/PduV, C-terminal; MIRO-like; KEGG: dsa:Desal_0484 ethanolamine utilization protein, EutP; Belongs to [...]
Dde_3264 protein networkhttps://string-db.org/network/207559.Dde_3264KEGG: dsa:Desal_0483 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
Dde_3265 protein networkhttps://string-db.org/network/207559.Dde_3265KEGG: dsa:Desal_0482 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
Dde_3266 protein networkhttps://string-db.org/network/207559.Dde_3266PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; KEGG: dsa:Desal_0481 respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
Dde_3267 protein networkhttps://string-db.org/network/207559.Dde_3267Alcohol dehydrogenase; KEGG: dsa:Desal_0480 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_3268 protein networkhttps://string-db.org/network/207559.Dde_3268Hypothetical protein.
Dde_3270 protein networkhttps://string-db.org/network/207559.Dde_3270KEGG: cts:Ctha_1877 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
Dde_3271 protein networkhttps://string-db.org/network/207559.Dde_3271KEGG: dps:DP1826 hypothetical protein.
Dde_3272 protein networkhttps://string-db.org/network/207559.Dde_3272PFAM: Microcompartment protein, bacteria; KEGG: dsa:Desal_0477 microcompartments protein.
Dde_3273 protein networkhttps://string-db.org/network/207559.Dde_3273PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dsa:Desal_0476 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.
Dde_3274 protein networkhttps://string-db.org/network/207559.Dde_3274KEGG: dsa:Desal_0475 hypothetical protein.
Dde_3275 protein networkhttps://string-db.org/network/207559.Dde_3275Putative shell protein; TIGRFAM: Ethanolamine utilisation EutJ; KEGG: dsa:Desal_0474 ethanolamine utilization protein EutJ.
Dde_3276 protein networkhttps://string-db.org/network/207559.Dde_3276Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
Dde_3278 protein networkhttps://string-db.org/network/207559.Dde_3278KEGG: dsa:Desal_0472 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
Dde_3279 protein networkhttps://string-db.org/network/207559.Dde_3279KEGG: dsa:Desal_0471 acetaldehyde dehydrogenase (acetylating); TIGRFAM: Acetaldehyde dehydrogenase, acetylating.
Dde_3280 protein networkhttps://string-db.org/network/207559.Dde_3280KEGG: dsa:Desal_0470 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
cutD protein networkhttps://string-db.org/network/207559.Dde_3281Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine res [...]
cutC protein networkhttps://string-db.org/network/207559.Dde_3282Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Is involved in the anaerobic choline uti [...]
Dde_3283 protein networkhttps://string-db.org/network/207559.Dde_3283KEGG: dsa:Desal_0467 acetaldehyde dehydrogenase-like protein.
Dde_3284 protein networkhttps://string-db.org/network/207559.Dde_3284KEGG: dsa:Desal_0466 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
Dde_3288 protein networkhttps://string-db.org/network/207559.Dde_3288PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dsa:Desal_0465 hypothetical protein.
Dde_3289 protein networkhttps://string-db.org/network/207559.Dde_3289KEGG: dsa:Desal_0464 hypothetical protein.
Dde_3291 protein networkhttps://string-db.org/network/207559.Dde_3291KEGG: dsa:Desal_0463 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
Dde_3292 protein networkhttps://string-db.org/network/207559.Dde_3292Hypothetical protein.
Dde_3293 protein networkhttps://string-db.org/network/207559.Dde_3293KEGG: dsa:Desal_2758 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl- [...]
Dde_3295 protein networkhttps://string-db.org/network/207559.Dde_3295KEGG: dsa:Desal_2758 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl- [...]
Dde_3297 protein networkhttps://string-db.org/network/207559.Dde_3297KEGG: ppd:Ppro_3001 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; Belongs to the UPF0312 family.
Dde_3298 protein networkhttps://string-db.org/network/207559.Dde_3298PFAM: Tryptophan/tyrosine permease; KEGG: dsa:Desal_1639 aromatic amino acid permease.
Dde_3299 protein networkhttps://string-db.org/network/207559.Dde_3299Hypothetical protein.
Dde_3303 protein networkhttps://string-db.org/network/207559.Dde_3303PFAM: Protein of unknown function DUF81; KEGG: aeh:Mlg_0416 hypothetical protein.
Dde_3305 protein networkhttps://string-db.org/network/207559.Dde_3305KEGG: drt:Dret_1055 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
Dde_3306 protein networkhttps://string-db.org/network/207559.Dde_3306PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: drt:Dret_1056 substrate-binding region of ABC-type glycine betaine transport system.
Dde_3307 protein networkhttps://string-db.org/network/207559.Dde_3307KEGG: nde:NIDE1115 hypothetical protein.
Dde_3308 protein networkhttps://string-db.org/network/207559.Dde_3308TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: das:Daes_0609 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
Dde_3309 protein networkhttps://string-db.org/network/207559.Dde_3309KEGG: dvl:Dvul_2010 ABC transporter substrate-binding protein.
Dde_3311 protein networkhttps://string-db.org/network/207559.Dde_3311KEGG: vex:VEA_000537 autoinducer 2-binding periplasmic protein LuxP precursor.
Dde_3313 protein networkhttps://string-db.org/network/207559.Dde_3313KEGG: ipa:Isop_1170 hypothetical protein.
Dde_3314 protein networkhttps://string-db.org/network/207559.Dde_3314KEGG: son:SO_A0180 hypothetical protein.
Dde_3315 protein networkhttps://string-db.org/network/207559.Dde_3315KEGG: das:Daes_1981 hypothetical protein.
Dde_3316 protein networkhttps://string-db.org/network/207559.Dde_3316PFAM: Glycosyl transferase, group 1; KEGG: mgm:Mmc1_0391 glycosyl transferase, group 1.
Dde_3317 protein networkhttps://string-db.org/network/207559.Dde_3317KEGG: eba:ebA4265 amidotransferase, asparagine synthase (glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class- [...]
Dde_3318 protein networkhttps://string-db.org/network/207559.Dde_3318PFAM: Methyltransferase type 11; KEGG: azl:AZL_f01090 methyltransferase.
Dde_3319 protein networkhttps://string-db.org/network/207559.Dde_3319KEGG: sat:SYN_00361 hypothetical protein.
Dde_3320 protein networkhttps://string-db.org/network/207559.Dde_3320PFAM: Glycosyl transferase, family 2; KEGG: atm:ANT_27690 putative glycosyltransferase.
Dde_3321 protein networkhttps://string-db.org/network/207559.Dde_3321KEGG: dvu:DVU0088 sodium/panthothenate symporter; TIGRFAM: Sodium/pantothenate symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; Belongs to the sodium:solute symporter [...]
Dde_3322 protein networkhttps://string-db.org/network/207559.Dde_3322PFAM: Protein of unknown function DUF997; KEGG: dsa:Desal_2644 hypothetical protein.
phnC protein networkhttps://string-db.org/network/207559.Dde_3324Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the AB [...]
Dde_3325 protein networkhttps://string-db.org/network/207559.Dde_3325TIGRFAM: ABC transporter, phosphonate, periplasmic substrate-binding protein; Phosphonate-binding periplasmic protein; KEGG: das:Daes_1171 phosphonate ABC transporter periplasmic phosphonate-bind [...]
Dde_3326 protein networkhttps://string-db.org/network/207559.Dde_3326KEGG: das:Daes_1172 phosphonate ABC transporter inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
Dde_3327 protein networkhttps://string-db.org/network/207559.Dde_3327Transcriptional regulator, GntR family with UTRA sensor domain-containing protein; TIGRFAM: Phosphonate C-P lyase system, transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associ [...]
Dde_3328 protein networkhttps://string-db.org/network/207559.Dde_3328KEGG: das:Daes_1163 phosphonate C-P lyase system protein PhnG; TIGRFAM: Phosphonate metabolism PhnG; PFAM: Phosphonate metabolism PhnG.
Dde_3329 protein networkhttps://string-db.org/network/207559.Dde_3329KEGG: das:Daes_1164 phosphonate C-P lyase system protein PhnH; TIGRFAM: Bacterial phosphonate metabolism; PFAM: Bacterial phosphonate metabolism.
Dde_3330 protein networkhttps://string-db.org/network/207559.Dde_3330PFAM: Phosphonate metabolism; KEGG: dba:Dbac_0815 phosphonate metabolism.
Dde_3331 protein networkhttps://string-db.org/network/207559.Dde_3331Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
Dde_3332 protein networkhttps://string-db.org/network/207559.Dde_3332SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphonate C-P lyase system, PhnK; KEGG: atu:Atu0177 phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC tr [...]
Dde_3333 protein networkhttps://string-db.org/network/207559.Dde_3333SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphonate C-P lyase system, PhnL; KEGG: das:Daes_1168 phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter-like.
Dde_3334 protein networkhttps://string-db.org/network/207559.Dde_3334KEGG: das:Daes_1169 phosphonate metabolism protein PhnM; TIGRFAM: Phosphonate metabolism PhnM; PFAM: Amidohydrolase 1.
Dde_3335 protein networkhttps://string-db.org/network/207559.Dde_3335Phosphonate metabolism protein; KEGG: rce:RC1_0524 hypothetical protein; TIGRFAM: Protein of unknown function DUF1045; PFAM: Protein of unknown function DUF1045.
phnN protein networkhttps://string-db.org/network/207559.Dde_3336Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
Dde_3337 protein networkhttps://string-db.org/network/207559.Dde_3337PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: dvl:Dvul_2946 rubrerythrin.
Dde_3339 protein networkhttps://string-db.org/network/207559.Dde_3339PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: dba:Dbac_0450 glutathione-dependent formaldehyde-activating GFA.
Dde_3344 protein networkhttps://string-db.org/network/207559.Dde_3344Hypothetical protein.
Dde_3345 protein networkhttps://string-db.org/network/207559.Dde_3345Helix-turn-helix domain protein; KEGG: dvm:DvMF_0710 putative phage repressor; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
Dde_3347 protein networkhttps://string-db.org/network/207559.Dde_3347KEGG: dvu:DVU1143 hypothetical protein.
Dde_3348 protein networkhttps://string-db.org/network/207559.Dde_3348KEGG: dvm:DvMF_0712 hypothetical protein.
Dde_3349 protein networkhttps://string-db.org/network/207559.Dde_3349Hypothetical protein.
Dde_3350 protein networkhttps://string-db.org/network/207559.Dde_3350PFAM: Transposase-like, Mu, C-terminal; Integrase, catalytic core; Transposase MuA/Repressor CI, DNA-binding; KEGG: dma:DMR_14490 hypothetical protein.
Dde_3351 protein networkhttps://string-db.org/network/207559.Dde_3351KEGG: dma:DMR_14500 hypothetical protein.
Dde_3352 protein networkhttps://string-db.org/network/207559.Dde_3352KEGG: dma:DMR_14510 hypothetical protein.
Dde_3353 protein networkhttps://string-db.org/network/207559.Dde_3353Hypothetical protein.
Dde_3354 protein networkhttps://string-db.org/network/207559.Dde_3354KEGG: dvu:DVU1136 host-nuclease inhibitor protein Gam.
Dde_3355 protein networkhttps://string-db.org/network/207559.Dde_3355KEGG: dvu:DVU1754 hypothetical protein.
Dde_3356 protein networkhttps://string-db.org/network/207559.Dde_3356Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
Dde_3357 protein networkhttps://string-db.org/network/207559.Dde_3357KEGG: dvm:DvMF_1270 hypothetical protein.
Dde_3358 protein networkhttps://string-db.org/network/207559.Dde_3358PFAM: Protein of unknown function DUF1018; KEGG: dbr:Deba_1602 hypothetical protein.
Dde_3359 protein networkhttps://string-db.org/network/207559.Dde_3359KEGG: dbr:Deba_1601 hypothetical protein.
Dde_3360 protein networkhttps://string-db.org/network/207559.Dde_3360KEGG: dvu:DVU1130 DNA-binding protein.
Dde_3361 protein networkhttps://string-db.org/network/207559.Dde_3361PFAM: Integrase, catalytic core; KEGG: das:Daes_2540 integrase catalytic subunit.
Dde_3362 protein networkhttps://string-db.org/network/207559.Dde_3362PFAM: Transposase IS3/IS911; KEGG: das:Daes_2541 transposase IS3/IS911 family protein.
Dde_3367 protein networkhttps://string-db.org/network/207559.Dde_3367PFAM: Peptidase M15A, C-terminal; KEGG: bvi:Bcep1808_3253 peptidase M15A.
Dde_3368 protein networkhttps://string-db.org/network/207559.Dde_3368Hypothetical protein.
Dde_3369 protein networkhttps://string-db.org/network/207559.Dde_3369Hypothetical protein.
Dde_3370 protein networkhttps://string-db.org/network/207559.Dde_3370KEGG: dbr:Deba_1593 hypothetical protein.
Dde_3371 protein networkhttps://string-db.org/network/207559.Dde_3371KEGG: dbr:Deba_1594 hypothetical protein.
Dde_3372 protein networkhttps://string-db.org/network/207559.Dde_3372KEGG: dvm:DvMF_1282 portal protein, putative.
Dde_3373 protein networkhttps://string-db.org/network/207559.Dde_3373PFAM: Protein of unknown function DUF935; KEGG: dbr:Deba_1596 hypothetical protein.
Dde_3374 protein networkhttps://string-db.org/network/207559.Dde_3374KEGG: dbr:Deba_1597 phage head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage putative head morphogenesis protein, SPP1 gp7.
Dde_3375 protein networkhttps://string-db.org/network/207559.Dde_3375KEGG: dvm:DvMF_1286 hypothetical protein.
Dde_3376 protein networkhttps://string-db.org/network/207559.Dde_3376KEGG: dbr:Deba_1590 hypothetical protein.
Dde_3377 protein networkhttps://string-db.org/network/207559.Dde_3377KEGG: dbr:Deba_1589 hypothetical protein.
Dde_3378 protein networkhttps://string-db.org/network/207559.Dde_3378PFAM: Protein of unknown function DUF1320; KEGG: dvm:DvMF_1289 protein of unknown function DUF1320.
Dde_3379 protein networkhttps://string-db.org/network/207559.Dde_3379TIGRFAM: Phage virion morphogenesis (putative tail completion) protein; KEGG: dvu:DVU1114 virion morphogenesis protein.
Dde_3380 protein networkhttps://string-db.org/network/207559.Dde_3380KEGG: dvm:DvMF_1291 hypothetical protein.
Dde_3381 protein networkhttps://string-db.org/network/207559.Dde_3381Hypothetical protein.
Dde_3382 protein networkhttps://string-db.org/network/207559.Dde_3382KEGG: gem:GM21_3662 hypothetical protein.
Dde_3383 protein networkhttps://string-db.org/network/207559.Dde_3383KEGG: gem:GM21_3661 hypothetical protein.
Dde_3384 protein networkhttps://string-db.org/network/207559.Dde_3384Hypothetical protein.
Dde_3385 protein networkhttps://string-db.org/network/207559.Dde_3385Hypothetical protein.
Dde_3386 protein networkhttps://string-db.org/network/207559.Dde_3386KEGG: aco:Amico_1111 phage tail tape measure protein, TP901 family; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region.
Dde_3387 protein networkhttps://string-db.org/network/207559.Dde_3387KEGG: dvu:DVU1106 hypothetical protein.
Dde_3388 protein networkhttps://string-db.org/network/207559.Dde_3388KEGG: dvu:DVU1105 hypothetical protein.
Dde_3389 protein networkhttps://string-db.org/network/207559.Dde_3389KEGG: dvu:DVU1104 baseplate assembly protein.
Dde_3390 protein networkhttps://string-db.org/network/207559.Dde_3390KEGG: dvu:DVU1103 baseplate assembly protein.
Dde_3391 protein networkhttps://string-db.org/network/207559.Dde_3391PFAM: Baseplate assembly protein J-like, predicted; KEGG: dvm:DvMF_1303 baseplate assembly protein, putative.
Dde_3392 protein networkhttps://string-db.org/network/207559.Dde_3392KEGG: dvm:DvMF_1304 hypothetical protein.
Dde_3393 protein networkhttps://string-db.org/network/207559.Dde_3393KEGG: dvm:DvMF_1305 tail fiber protein, putative.
Dde_3394 protein networkhttps://string-db.org/network/207559.Dde_3394KEGG: tcx:Tcr_0692 hypothetical protein.
Dde_3396 protein networkhttps://string-db.org/network/207559.Dde_3396KEGG: dal:Dalk_3540 hypothetical protein.
Dde_3397 protein networkhttps://string-db.org/network/207559.Dde_3397Formyltetrahydrofolate dehydrogenase; KEGG: azl:AZL_a06020 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal.
Dde_3398 protein networkhttps://string-db.org/network/207559.Dde_3398Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: dma:DMR_34440 site-specific recombinase; Belongs to the 'phage' integrase family.
Dde_3399 protein networkhttps://string-db.org/network/207559.Dde_3399Hypothetical protein.
Dde_3403 protein networkhttps://string-db.org/network/207559.Dde_3403KEGG: sfu:Sfum_2425 hypothetical protein.
Dde_3404 protein networkhttps://string-db.org/network/207559.Dde_3404KEGG: elm:ELI_1642 hypothetical protein.
Dde_3406 protein networkhttps://string-db.org/network/207559.Dde_3406KEGG: gme:Gmet_3281 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_3407 protein networkhttps://string-db.org/network/207559.Dde_3407PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix region; KEGG: gme:Gmet_3282 integrase catalytic subunit.
Dde_3412 protein networkhttps://string-db.org/network/207559.Dde_3412PFAM: Heat shock protein Hsp20; KEGG: rpf:Rpic12D_0629 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
Dde_3413 protein networkhttps://string-db.org/network/207559.Dde_3413KEGG: mfa:Mfla_1170 ATPase AAA-2; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; [...]
Dde_3414 protein networkhttps://string-db.org/network/207559.Dde_3414Hypothetical protein; KEGG: rpf:Rpic12D_0625 phospholipase D/transphosphatidylase.
ftsH-2 protein networkhttps://string-db.org/network/207559.Dde_3415ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
Dde_3416 protein networkhttps://string-db.org/network/207559.Dde_3416TIGRFAM: Thioredoxin; KEGG: mfa:Mfla_1161 thioredoxin; PFAM: Thioredoxin domain.
Dde_3417 protein networkhttps://string-db.org/network/207559.Dde_3417Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fol [...]
Dde_3418 protein networkhttps://string-db.org/network/207559.Dde_3418KEGG: rpf:Rpic12D_0616 hypothetical protein.
Dde_3419 protein networkhttps://string-db.org/network/207559.Dde_3419PFAM: Peptidase M48, Ste24p; KEGG: bmj:BMULJ_00933 heat shock protein.
Dde_3420 protein networkhttps://string-db.org/network/207559.Dde_3420Peptidase S1 and S6 chymotrypsin/Hap; KEGG: bmj:BMULJ_00932 putative trypsin-like serine protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
Dde_3421 protein networkhttps://string-db.org/network/207559.Dde_3421PFAM: Glycoside hydrolase, family 24; KEGG: bmj:BMULJ_00931 lysozyme.
Dde_3424 protein networkhttps://string-db.org/network/207559.Dde_3424Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
Dde_3425 protein networkhttps://string-db.org/network/207559.Dde_3425PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: dbr:Deba_2538 restriction modification system DNA specificity domain protein.
Dde_3426 protein networkhttps://string-db.org/network/207559.Dde_3426AAA-4 family protein; PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: tme:Tmel_1088 putative transcriptional regulator.
Dde_3427 protein networkhttps://string-db.org/network/207559.Dde_3427KEGG: dbr:Deba_2540 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase, adenine-specific.
Dde_3428 protein networkhttps://string-db.org/network/207559.Dde_3428KEGG: sun:SUN_1095 hypothetical protein.
Dde_3429 protein networkhttps://string-db.org/network/207559.Dde_3429TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; KEGG: dbr:Deba_2542 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific.
Dde_3430 protein networkhttps://string-db.org/network/207559.Dde_3430KEGG: sat:SYN_01828 putative cytoplasmic protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Prophage CP4-57 regulatory.
Dde_3431 protein networkhttps://string-db.org/network/207559.Dde_3431ERF family protein; PFAM: ERF; KEGG: dvu:DVU2032 ERF family protein.
Dde_3432 protein networkhttps://string-db.org/network/207559.Dde_3432KEGG: dvu:DVU2033 hypothetical protein.
Dde_3433 protein networkhttps://string-db.org/network/207559.Dde_3433KEGG: dvl:Dvul_2608 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core.
Dde_3434 protein networkhttps://string-db.org/network/207559.Dde_3434KEGG: dvl:Dvul_2612 hypothetical protein.
Dde_3435 protein networkhttps://string-db.org/network/207559.Dde_3435SMART: von Willebrand factor, type A; KEGG: dvl:Dvul_2614 von Willebrand factor type A.
Dde_3436 protein networkhttps://string-db.org/network/207559.Dde_3436Hypothetical protein.
Dde_3441 protein networkhttps://string-db.org/network/207559.Dde_3441PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: dhd:Dhaf_0086 filamentation induced by cAMP protein Fic.
Dde_3444 protein networkhttps://string-db.org/network/207559.Dde_3444KEGG: sfu:Sfum_2425 hypothetical protein.
Dde_3447 protein networkhttps://string-db.org/network/207559.Dde_3447PFAM: Mechanosensitive ion channel MscS; KEGG: dsa:Desal_2909 MscS mechanosensitive ion channel.
Dde_3449 protein networkhttps://string-db.org/network/207559.Dde_3449KEGG: dvm:DvMF_1712 hypothetical protein.
polA protein networkhttps://string-db.org/network/207559.Dde_3450DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
Dde_3451 protein networkhttps://string-db.org/network/207559.Dde_3451KEGG: dvl:Dvul_2446 hypothetical protein.
Dde_3452 protein networkhttps://string-db.org/network/207559.Dde_3452KEGG: dvl:Dvul_2447 serine--glyoxylate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
Dde_3453 protein networkhttps://string-db.org/network/207559.Dde_3453PFAM: Protein of unknown function DUF1844; KEGG: dvm:DvMF_1716 hypothetical protein.
argC protein networkhttps://string-db.org/network/207559.Dde_3455N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
Dde_3456 protein networkhttps://string-db.org/network/207559.Dde_3456KEGG: dvm:DvMF_1719 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_3457 protein networkhttps://string-db.org/network/207559.Dde_3457KEGG: dvu:DVU0489 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase/ligase.
purD protein networkhttps://string-db.org/network/207559.Dde_3458Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-doma [...]
purE protein networkhttps://string-db.org/network/207559.Dde_3459Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
Dde_3460 protein networkhttps://string-db.org/network/207559.Dde_3460KEGG: dvm:DvMF_1726 hypothetical protein.
Dde_3461 protein networkhttps://string-db.org/network/207559.Dde_3461KEGG: dvm:DvMF_1727 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00245; PFAM: Conserved hypothetical protein CHP00245.
mutL protein networkhttps://string-db.org/network/207559.Dde_3464DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
Dde_3465 protein networkhttps://string-db.org/network/207559.Dde_3465Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kina [...]
hldD protein networkhttps://string-db.org/network/207559.Dde_3466ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the [...]
Dde_3467 protein networkhttps://string-db.org/network/207559.Dde_3467KEGG: dvl:Dvul_2461 hypothetical protein.
Dde_3468 protein networkhttps://string-db.org/network/207559.Dde_3468PFAM: Serine/threonine-protein kinase-like domain; Protein of unknown function DUF1566; KEGG: dvl:Dvul_2462 protein kinase.
Dde_3469 protein networkhttps://string-db.org/network/207559.Dde_3469PFAM: Metallophosphoesterase; KEGG: dvm:DvMF_1737 metallophosphoesterase.
Dde_3470 protein networkhttps://string-db.org/network/207559.Dde_34706-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; KEGG: tro:trd_1142 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluc [...]
zwf protein networkhttps://string-db.org/network/207559.Dde_3471Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
Dde_3472 protein networkhttps://string-db.org/network/207559.Dde_3472PFAM: GCN5-related N-acetyltransferase; KEGG: dsa:Desal_2276 MarR family transcriptional regulator.
Dde_3473 protein networkhttps://string-db.org/network/207559.Dde_3473KEGG: axy:AXYL_06108 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; Belongs to the LOG family.
Dde_3474 protein networkhttps://string-db.org/network/207559.Dde_3474Transcriptional regulator, ArgP, LysR family; KEGG: dvm:DvMF_2123 chromosome replication initiation inhibitor protein; TIGRFAM: Transcriptional regulator, ArgP; PFAM: HTH transcriptional regulato [...]
Dde_3475 protein networkhttps://string-db.org/network/207559.Dde_3475PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: das:Daes_0054 lysine exporter protein LysE/YggA.
Dde_3476 protein networkhttps://string-db.org/network/207559.Dde_3476KEGG: dvm:DvMF_1739 isocitrate/isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase.
trpA protein networkhttps://string-db.org/network/207559.Dde_3478Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
trpB-2 protein networkhttps://string-db.org/network/207559.Dde_3479Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
trpF-2 protein networkhttps://string-db.org/network/207559.Dde_3480KEGG: dvm:DvMF_1742 phosphoribosylanthranilate isomerase; PFAM: N-5'phosphoribosylanthranilate isomerase (PRAI); Belongs to the TrpF family.
Dde_3481 protein networkhttps://string-db.org/network/207559.Dde_3481KEGG: dma:DMR_05280 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase.
trpD protein networkhttps://string-db.org/network/207559.Dde_3482Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...]
Dde_3483 protein networkhttps://string-db.org/network/207559.Dde_3483TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: dvl:Dvul_2471 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal.
Dde_3484 protein networkhttps://string-db.org/network/207559.Dde_3484KEGG: dvm:DvMF_1746 anthranilate synthase; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal.
Dde_3485 protein networkhttps://string-db.org/network/207559.Dde_3485PFAM: Prephenate dehydrogenase; KEGG: dvm:DvMF_1747 prephenate dehydrogenase.
aroA protein networkhttps://string-db.org/network/207559.Dde_34863-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
Dde_3487 protein networkhttps://string-db.org/network/207559.Dde_3487KEGG: dvm:DvMF_1749 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II; SMART: Chorismate mutase.
Dde_3488 protein networkhttps://string-db.org/network/207559.Dde_3488PFAM: 3-dehydroquinate synthase, prokaryotic-type; KEGG: dvl:Dvul_2476 3-dehydroquinate synthase.
aroA-2 protein networkhttps://string-db.org/network/207559.Dde_3489Phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypy [...]
aroA-3 protein networkhttps://string-db.org/network/207559.Dde_3490Phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypy [...]
Dde_3492 protein networkhttps://string-db.org/network/207559.Dde_3492KEGG: drt:Dret_0113 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter.
Dde_3493 protein networkhttps://string-db.org/network/207559.Dde_3493PFAM: Nitrogen regulatory protein PII; KEGG: dsa:Desal_3067 nitrogen regulatory protein P-II.
Dde_3494 protein networkhttps://string-db.org/network/207559.Dde_3494PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: dvl:Dvul_2480 phosphoesterase domain-containing protein.
Dde_3495 protein networkhttps://string-db.org/network/207559.Dde_3495Cobalbumin biosynthesis protein; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
Dde_3496 protein networkhttps://string-db.org/network/207559.Dde_3496KEGG: dvu:DVU0455 hypothetical protein.
Dde_3499 protein networkhttps://string-db.org/network/207559.Dde_3499PFAM: DNA helicase, UvrD/REP type; PHP, C-terminal; KEGG: dvl:Dvul_2483 UvrD/REP helicase.
Dde_3501 protein networkhttps://string-db.org/network/207559.Dde_3501PFAM: Methyltransferase small; KEGG: dma:DMR_28910 hypothetical protein.
Dde_3502 protein networkhttps://string-db.org/network/207559.Dde_3502KEGG: dba:Dbac_3110 fructose-bisphosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
Dde_3503 protein networkhttps://string-db.org/network/207559.Dde_3503Hypothetical protein.
Dde_3504 protein networkhttps://string-db.org/network/207559.Dde_3504KEGG: dvu:DVU0451 chloride channel family protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
Dde_3505 protein networkhttps://string-db.org/network/207559.Dde_3505Riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: dvm:DvMF_1762 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflav [...]
Dde_3506 protein networkhttps://string-db.org/network/207559.Dde_3506KEGG: dvm:DvMF_2730 hypothetical protein.
Dde_3508 protein networkhttps://string-db.org/network/207559.Dde_3508KEGG: dma:DMR_01390 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling.
Dde_3509 protein networkhttps://string-db.org/network/207559.Dde_3509PFAM: Protein of unknown function DUF898, transmembrane bacterial; KEGG: gbe:GbCGDNIH1_1250 hypothetical protein.
Dde_3510 protein networkhttps://string-db.org/network/207559.Dde_3510PFAM: Peptidase M48, Ste24p; KEGG: rce:RC1_3147 peptidase M48 family, putative.
Dde_3511 protein networkhttps://string-db.org/network/207559.Dde_3511PFAM: HTH transcriptional regulator, LysR; KEGG: dsa:Desal_2665 ModE family transcriptional regulator.
Dde_3512 protein networkhttps://string-db.org/network/207559.Dde_3512PFAM: Molybdopterin oxidoreductase Fe4S4 region; KEGG: dvl:Dvul_0501 formate dehydrogenase, subunit alpha.
Dde_3513 protein networkhttps://string-db.org/network/207559.Dde_3513TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; KEGG: dvl:Dvul_0501 formate dehydrogenase, subunit alpha; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; B [...]
Dde_3514 protein networkhttps://string-db.org/network/207559.Dde_3514Formate dehydrogenase beta subunit; KEGG: dsa:Desal_2658 FdhB2.
Dde_3515 protein networkhttps://string-db.org/network/207559.Dde_3515Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
fdhD protein networkhttps://string-db.org/network/207559.Dde_3516Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor [...]
Dde_3517 protein networkhttps://string-db.org/network/207559.Dde_3517Molybdenum-pterin binding protein; KEGG: dsa:Desal_0307 TOBE domain protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; Integrase, catalytic core, phage.
Dde_3518 protein networkhttps://string-db.org/network/207559.Dde_3518KEGG: dsa:Desal_0306 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-bindi [...]
Dde_3519 protein networkhttps://string-db.org/network/207559.Dde_3519Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the me [...]
Dde_3520 protein networkhttps://string-db.org/network/207559.Dde_3520Molybdate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dma:DMR_19520 putative molybdenum ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
Dde_3521 protein networkhttps://string-db.org/network/207559.Dde_3521PFAM: HTH transcriptional regulator, LysR; KEGG: dvl:Dvul_1572 ModE family transcriptional regulator.
Dde_3523 protein networkhttps://string-db.org/network/207559.Dde_3523Alcohol dehydrogenase; KEGG: drt:Dret_0199 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_3524 protein networkhttps://string-db.org/network/207559.Dde_3524KEGG: dsa:Desal_0602 heterodisulfide reductase, C subunit.
Dde_3525 protein networkhttps://string-db.org/network/207559.Dde_3525KEGG: dsa:Desal_0601 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich region, CCG.
Dde_3526 protein networkhttps://string-db.org/network/207559.Dde_3526PFAM: FAD dependent oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0828 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_3527 protein networkhttps://string-db.org/network/207559.Dde_3527PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; KEGG: dma:DMR_01930 methyl-viologen-reducing hydrogenase delta subunit family protein.
Dde_3528 protein networkhttps://string-db.org/network/207559.Dde_3528PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_2313 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_3529 protein networkhttps://string-db.org/network/207559.Dde_3529KEGG: drt:Dret_2312 iron-sulfur binding protein.
Dde_3530 protein networkhttps://string-db.org/network/207559.Dde_3530PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding region; KEGG: dsa:Desal_0596 oxid [...]
Dde_3531 protein networkhttps://string-db.org/network/207559.Dde_3531KEGG: dvm:DvMF_0329 hypothetical protein.
Dde_3534 protein networkhttps://string-db.org/network/207559.Dde_3534Alcohol dehydrogenase; KEGG: dvl:Dvul_0834 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
Dde_3535 protein networkhttps://string-db.org/network/207559.Dde_3535KEGG: dsa:Desal_0288 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor reg [...]
Dde_3536 protein networkhttps://string-db.org/network/207559.Dde_3536Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: dsa:Desal_0287 fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transd [...]
Dde_3538 protein networkhttps://string-db.org/network/207559.Dde_3538Molybdopterin binding domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Dde_3539 protein networkhttps://string-db.org/network/207559.Dde_3539KEGG: dvl:Dvul_1574 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Ferredoxin; [2Fe-2S]-binding; Aldehyd [...]
Dde_3540 protein networkhttps://string-db.org/network/207559.Dde_3540PFAM: Amine oxidase; Cysteine-rich region, CCG; KEGG: dvu:DVU1558 hypothetical protein.
Dde_3541 protein networkhttps://string-db.org/network/207559.Dde_3541KEGG: dsa:Desal_0297 hypothetical protein.
Dde_3542 protein networkhttps://string-db.org/network/207559.Dde_3542PFAM: Methyltransferase type 11; KEGG: dvu:DVU1556 hypothetical protein.
Dde_3543 protein networkhttps://string-db.org/network/207559.Dde_3543C_GCAxxG_C_C family protein; PFAM: CGCAxxGCC motif; KEGG: dvl:Dvul_1578 hypothetical protein.
Dde_3544 protein networkhttps://string-db.org/network/207559.Dde_3544KEGG: dsa:Desal_0294 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
Dde_3545 protein networkhttps://string-db.org/network/207559.Dde_3545Coenzyme F390 synthetase family, putatively involved in CO dehydrogenase maturation; PFAM: AMP-dependent synthetase/ligase; KEGG: dvu:DVU1553 AMP-binding protein.
Dde_3546 protein networkhttps://string-db.org/network/207559.Dde_3546XshC-Cox1-family protein; PFAM: XdhC- CoxI; KEGG: dvl:Dvul_1581 hypothetical protein.
Dde_3547 protein networkhttps://string-db.org/network/207559.Dde_3547KEGG: dsa:Desal_0291 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
Dde_3548 protein networkhttps://string-db.org/network/207559.Dde_3548KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_3549 protein networkhttps://string-db.org/network/207559.Dde_3549KEGG: dvu:DVU2006 hypothetical protein.
Dde_3550 protein networkhttps://string-db.org/network/207559.Dde_3550PFAM: Phosphoglycerate mutase; KEGG: dvl:Dvul_1583 phosphoglycerate mutase.
Dde_3551 protein networkhttps://string-db.org/network/207559.Dde_3551PFAM: Protein of unknown function DUF1045; KEGG: rru:Rru_A1036 hypothetical protein.
Dde_3552 protein networkhttps://string-db.org/network/207559.Dde_3552Aspartate ammonia-lyase; KEGG: das:Daes_0595 fumarate lyase; PFAM: Fumarate lyase.
Dde_3553 protein networkhttps://string-db.org/network/207559.Dde_3553KEGG: dvm:DvMF_2443 hypothetical protein.
zupT protein networkhttps://string-db.org/network/207559.Dde_3555Zinc/iron permease; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
Dde_3556 protein networkhttps://string-db.org/network/207559.Dde_3556PFAM: Acyltransferase 3; KEGG: pap:PSPA7_5981 putative O-antigen acetylase.
Dde_3561 protein networkhttps://string-db.org/network/207559.Dde_3561KEGG: dvl:Dvul_2346 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signal [...]
Dde_3562 protein networkhttps://string-db.org/network/207559.Dde_3562PFAM: Protein of unknown function DUF302; KEGG: dvm:DvMF_0007 protein of unknown function DUF302.
Dde_3563 protein networkhttps://string-db.org/network/207559.Dde_3563PFAM: Copper resistance lipoprotein NlpE; KEGG: axy:AXYL_04242 lipoprotein NlpE involved in copper resistance family protein.
aroE protein networkhttps://string-db.org/network/207559.Dde_3564Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshi [...]
hisG protein networkhttps://string-db.org/network/207559.Dde_3566ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...]
hisI protein networkhttps://string-db.org/network/207559.Dde_3567Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
Dde_3569 protein networkhttps://string-db.org/network/207559.Dde_3569KEGG: dvl:Dvul_2810 class II aldolase/adducin family protein; TIGRFAM: Uncharacterized protein family UPF0066; PFAM: Class II aldolase/adducin, N-terminal; Uncharacterized protein family UPF0066.
thiL protein networkhttps://string-db.org/network/207559.Dde_3570Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thi [...]
Dde_3571 protein networkhttps://string-db.org/network/207559.Dde_3571PFAM: DNA helicase, UvrD/REP type; KEGG: dvm:DvMF_1967 UvrD/REP helicase.
Dde_3572 protein networkhttps://string-db.org/network/207559.Dde_3572PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: dvl:Dvul_2813 type I phosphodiesterase/nucleotide pyrophosphatase.
Dde_3573 protein networkhttps://string-db.org/network/207559.Dde_3573KEGG: dvm:DvMF_1970 hypothetical protein.
Dde_3580 protein networkhttps://string-db.org/network/207559.Dde_3580KEGG: dvm:DvMF_2218 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
Dde_3581 protein networkhttps://string-db.org/network/207559.Dde_3581KEGG: dvu:DVU0042 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; Belongs to the [...]
fliQ protein networkhttps://string-db.org/network/207559.Dde_3582Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
fliP protein networkhttps://string-db.org/network/207559.Dde_3583Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
Dde_3584 protein networkhttps://string-db.org/network/207559.Dde_3584KEGG: dvm:DvMF_2214 flagellar biosynthesis protein FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO.
Dde_3585 protein networkhttps://string-db.org/network/207559.Dde_3585KEGG: dvm:DvMF_2213 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA).
Dde_3586 protein networkhttps://string-db.org/network/207559.Dde_3586Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
Dde_3587 protein networkhttps://string-db.org/network/207559.Dde_3587PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dsa:Desal_3813 OmpA/MotB domain protein.
Dde_3588 protein networkhttps://string-db.org/network/207559.Dde_3588PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dvm:DvMF_2210 OmpA/MotB domain protein.
Dde_3589 protein networkhttps://string-db.org/network/207559.Dde_3589PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_3811 MotA/TolQ/ExbB proton channel.
Dde_3590 protein networkhttps://string-db.org/network/207559.Dde_3590Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
era protein networkhttps://string-db.org/network/207559.Dde_3591GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
Dde_3592 protein networkhttps://string-db.org/network/207559.Dde_3592PFAM: Integrase, catalytic core; KEGG: dau:Daud_0321 integrase catalytic subunit.
Dde_3593 protein networkhttps://string-db.org/network/207559.Dde_3593KEGG: dvm:DvMF_2206 hypothetical protein.
sfsA protein networkhttps://string-db.org/network/207559.Dde_3594KEGG: dvm:DvMF_2205 sugar fermentation stimulation protein; TIGRFAM: Sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; Belongs to the SfsA family.
Dde_3596 protein networkhttps://string-db.org/network/207559.Dde_3596Aspartate transaminase; KEGG: dvl:Dvul_0165 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II.
Dde_3597 protein networkhttps://string-db.org/network/207559.Dde_3597PFAM: Phosphoglucose isomerase (PGI); KEGG: dvm:DvMF_2202 glucose-6-phosphate isomerase.
Dde_3598 protein networkhttps://string-db.org/network/207559.Dde_3598KEGG: dvm:DvMF_2201 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacc [...]
Dde_3599 protein networkhttps://string-db.org/network/207559.Dde_3599Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: dvu:DVU3220 sigma-54 dependent transcriptional regulator/response regulator; PFAM: RNA polymerase sigma factor 54, in [...]
Dde_3600 protein networkhttps://string-db.org/network/207559.Dde_3600Protein of unknown function UPF0052 and CofD; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052; KEGG: das:Daes_1179 hypothetical protein.
Dde_3601 protein networkhttps://string-db.org/network/207559.Dde_3601KEGG: dba:Dbac_2697 hypothetical protein.
Dde_3602 protein networkhttps://string-db.org/network/207559.Dde_3602KEGG: sse:Ssed_2385 hypothetical protein.
Dde_3603 protein networkhttps://string-db.org/network/207559.Dde_3603Protein of unknown function DUF1998; KEGG: dvu:DVU0256 DEAD-box ATP dependent DNA helicase; PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA he [...]
Dde_3604 protein networkhttps://string-db.org/network/207559.Dde_3604D-lactate dehydrogenase (cytochrome); KEGG: dvm:DvMF_2196 FAD linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur [...]
Dde_3605 protein networkhttps://string-db.org/network/207559.Dde_3605rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
Dde_3606 protein networkhttps://string-db.org/network/207559.Dde_3606Protein of unknown function UPF0153; PFAM: Uncharacterized protein family UPF0153; KEGG: dvl:Dvul_2824 hypothetical protein.
Dde_3607 protein networkhttps://string-db.org/network/207559.Dde_3607TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: dvl:Dvul_2825 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib.
Dde_3608 protein networkhttps://string-db.org/network/207559.Dde_3608PFAM: Peptidase M50; KEGG: dvl:Dvul_2826 peptidase M50.
Dde_3609 protein networkhttps://string-db.org/network/207559.Dde_3609KEGG: dvm:DvMF_2332 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_3610 protein networkhttps://string-db.org/network/207559.Dde_3610KEGG: dvu:DVU0136 hypothetical protein.
Dde_3611 protein networkhttps://string-db.org/network/207559.Dde_3611Protein of unknown function UPF0021; KEGG: dvm:DvMF_2330 PP-loop domain protein; TIGRFAM: Uncharacterized protein family UPF0021, C-terminal; PFAM: PP-loop; Belongs to the TtcA family.
Dde_3612 protein networkhttps://string-db.org/network/207559.Dde_3612PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_2329 glycosyl transferase family 2.
Dde_3613 protein networkhttps://string-db.org/network/207559.Dde_3613PFAM: Glycosyl transferase, group 1; PHP, C-terminal; KEGG: dvm:DvMF_2328 glycosyl transferase group 1.
infA1 protein networkhttps://string-db.org/network/207559.Dde_3614Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
Dde_3615 protein networkhttps://string-db.org/network/207559.Dde_3615KEGG: dma:DMR_23200 hypothetical protein.
Dde_3616 protein networkhttps://string-db.org/network/207559.Dde_3616KEGG: dvu:DVU0365 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase.
Dde_3617 protein networkhttps://string-db.org/network/207559.Dde_3617Anthranilate synthase; KEGG: dvl:Dvul_2620 glutamine amidotransferase class-I; PFAM: Glutamine amidotransferase class-I, C-terminal.
Dde_3618 protein networkhttps://string-db.org/network/207559.Dde_3618Anthranilate synthase; KEGG: dvm:DvMF_2315 chorismate binding-like protein; PFAM: Chorismate binding, C-terminal.
Dde_3619 protein networkhttps://string-db.org/network/207559.Dde_3619PFAM: Aminotransferase, class IV; KEGG: das:Daes_3323 class IV aminotransferase.
Dde_3620 protein networkhttps://string-db.org/network/207559.Dde_3620KEGG: dvm:DvMF_3196 hypothetical protein.
dinB protein networkhttps://string-db.org/network/207559.Dde_3621DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatch [...]
Dde_3622 protein networkhttps://string-db.org/network/207559.Dde_3622Hypothetical protein.
Dde_3623 protein networkhttps://string-db.org/network/207559.Dde_3623PFAM: Metallophosphoesterase; KEGG: dvm:DvMF_2312 metallophosphoesterase.
Dde_3624 protein networkhttps://string-db.org/network/207559.Dde_3624KEGG: dvm:DvMF_2311 hypothetical protein.
Dde_3625 protein networkhttps://string-db.org/network/207559.Dde_3625KEGG: dvm:DvMF_2310 hypothetical protein.
Dde_3627 protein networkhttps://string-db.org/network/207559.Dde_3627Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
Dde_3628 protein networkhttps://string-db.org/network/207559.Dde_3628KEGG: dsa:Desal_1095 efflux transporter RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Dde_3629 protein networkhttps://string-db.org/network/207559.Dde_3629Protein TolQ; KEGG: dvl:Dvul_0282 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel.
Dde_3630 protein networkhttps://string-db.org/network/207559.Dde_3630Protein TolR; KEGG: dvl:Dvul_0281 biopolymer transport protein ExbD/TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR.
Dde_3631 protein networkhttps://string-db.org/network/207559.Dde_3631Protein TolA; TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal; KEGG: dvm:DvMF_2362 protein TolA.
Dde_3632 protein networkhttps://string-db.org/network/207559.Dde_3632KEGG: dvm:DvMF_2360 Tol-Pal system beta propeller repeat protein TolB.
pal protein networkhttps://string-db.org/network/207559.Dde_3633Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
Dde_3635 protein networkhttps://string-db.org/network/207559.Dde_3635TIGRFAM: Glutamate synthase (NADPH), homotetrameric; KEGG: dvl:Dvul_0766 oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreduc [...]
Dde_3636 protein networkhttps://string-db.org/network/207559.Dde_3636PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: dvm:DvMF_0937 ferredoxin-NADP(+) reductase subunit alp [...]
Dde_3637 protein networkhttps://string-db.org/network/207559.Dde_3637PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: drt:Dret_0778 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
Dde_3638 protein networkhttps://string-db.org/network/207559.Dde_3638TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: dvm:DvMF_2462 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarat [...]
Dde_3639 protein networkhttps://string-db.org/network/207559.Dde_3639TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: das:Daes_2064 hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha; PFAM: Fe-S type hydro-lyases tartrate/fumara [...]
Dde_3640 protein networkhttps://string-db.org/network/207559.Dde_3640KEGG: dbr:Deba_3065 hexapaptide repeat-containing transferase.
Dde_3641 protein networkhttps://string-db.org/network/207559.Dde_3641KEGG: das:Daes_0067 sulfate transporter; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS.
Dde_3645 protein networkhttps://string-db.org/network/207559.Dde_3645KEGG: dvm:DvMF_2369 TPR repeat-containing protein.
carA protein networkhttps://string-db.org/network/207559.Dde_3646TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: dvl:Dvul_0268 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amid [...]
kdsB protein networkhttps://string-db.org/network/207559.Dde_36473-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
prfC protein networkhttps://string-db.org/network/207559.Dde_3649Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...]
Dde_3650 protein networkhttps://string-db.org/network/207559.Dde_3650Hypothetical protein.
Dde_3652 protein networkhttps://string-db.org/network/207559.Dde_3652TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; KEGG: dsa:Desal_0508 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal; Galactose-1 [...]
Dde_3653 protein networkhttps://string-db.org/network/207559.Dde_3653Galactokinase; KEGG: dsa:Desal_0507 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase.
Dde_3654 protein networkhttps://string-db.org/network/207559.Dde_3654KEGG: dsa:Desal_0506 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regul [...]
Dde_3655 protein networkhttps://string-db.org/network/207559.Dde_3655Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
Dde_3656 protein networkhttps://string-db.org/network/207559.Dde_3656Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dsa:Desal_0504 ABC transporter; SMART: ATPase, AAA+ type, core; Belongs to the ABC tra [...]
Dde_3657 protein networkhttps://string-db.org/network/207559.Dde_3657PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dsa:Desal_0503 extracellular solute-binding protein family 1.
Dde_3658 protein networkhttps://string-db.org/network/207559.Dde_3658ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0502 binding-protein-dependent transport systems inner [...]
Dde_3659 protein networkhttps://string-db.org/network/207559.Dde_3659ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0501 binding-protein-dependent transport systems inner [...]
Dde_3660 protein networkhttps://string-db.org/network/207559.Dde_3660KEGG: dvl:Dvul_2922 TraR/DksA family transcriptional regulator.
Dde_3661 protein networkhttps://string-db.org/network/207559.Dde_3661KEGG: dvm:DvMF_2169 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase.
Dde_3662 protein networkhttps://string-db.org/network/207559.Dde_3662PFAM: Protein of unknown function DUF523; KEGG: dvl:Dvul_2924 hypothetical protein.
Dde_3666 protein networkhttps://string-db.org/network/207559.Dde_3666Hypothetical protein.
Dde_3667 protein networkhttps://string-db.org/network/207559.Dde_3667Flavodoxin; KEGG: dvm:DvMF_1143 flavodoxin; TIGRFAM: Flavodoxin, short chain; PFAM: Flavodoxin/nitric oxide synthase.
potA protein networkhttps://string-db.org/network/207559.Dde_3670Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [...]
Dde_3671 protein networkhttps://string-db.org/network/207559.Dde_3671ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1959 binding-protein-dependent transport systems inner [...]
Dde_3672 protein networkhttps://string-db.org/network/207559.Dde_3672ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1958 spermidine/putrescine ABC transporter membrane pro [...]
Dde_3673 protein networkhttps://string-db.org/network/207559.Dde_3673Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF fam [...]
fur-4 protein networkhttps://string-db.org/network/207559.Dde_3674Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: dvl:Dvul_0284 ferric uptake regulator family protein; Belongs to the Fur family.
Dde_3675 protein networkhttps://string-db.org/network/207559.Dde_3675KEGG: sku:Sulku_2387 hypothetical protein.
Dde_3676 protein networkhttps://string-db.org/network/207559.Dde_3676Acetyltransferase; KEGG: sku:Sulku_2385 acetyltransferase.
Dde_3677 protein networkhttps://string-db.org/network/207559.Dde_3677KEGG: mau:Micau_1844 asparagine synthase; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II.
Dde_3678 protein networkhttps://string-db.org/network/207559.Dde_3678PFAM: Glycosyl transferase, family 2; KEGG: npu:Npun_R1218 filamentous haemagglutinin outer membrane protein.
Dde_3679 protein networkhttps://string-db.org/network/207559.Dde_3679PFAM: Acylneuraminate cytidylyltransferase; KEGG: pcu:pc1566 hypothetical protein.
Dde_3680 protein networkhttps://string-db.org/network/207559.Dde_3680Hypothetical protein; KEGG: mja:MJ_1064 galactoside acetyltransferase LacA.
Dde_3681 protein networkhttps://string-db.org/network/207559.Dde_3681KEGG: mta:Moth_0756 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain.
Dde_3683 protein networkhttps://string-db.org/network/207559.Dde_3683Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_3273 ABC transporter related; SMART: ATPase, AAA+ type, core.
Dde_3684 protein networkhttps://string-db.org/network/207559.Dde_3684KEGG: dsa:Desal_3624 hypothetical protein.
Dde_3685 protein networkhttps://string-db.org/network/207559.Dde_3685PFAM: HpcH/HpaI aldolase; KEGG: dvl:Dvul_2640 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
Dde_3686 protein networkhttps://string-db.org/network/207559.Dde_3686PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvl:Dvul_2641 NAD-dependent epimerase/dehydratase.
Dde_3687 protein networkhttps://string-db.org/network/207559.Dde_3687TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: dvm:DvMF_1900 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; Belongs to the KdsB fa [...]
Dde_3688 protein networkhttps://string-db.org/network/207559.Dde_3688KEGG: dvl:Dvul_2643 hexapaptide repeat-containing transferase.
Dde_3689 protein networkhttps://string-db.org/network/207559.Dde_3689Phosphoglycerate dehydrogenase; KEGG: dvl:Dvul_2644 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific [...]
Dde_3690 protein networkhttps://string-db.org/network/207559.Dde_3690PFAM: Haloacid dehalogenase-like hydrolase; KEGG: dvm:DvMF_1903 haloacid dehalogenase domain protein hydrolase.
Dde_3691 protein networkhttps://string-db.org/network/207559.Dde_3691dTDP-glucose 4,6-dehydratase; KEGG: sku:Sulku_2396 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_3692 protein networkhttps://string-db.org/network/207559.Dde_3692Hypothetical protein; KEGG: das:Daes_1161 phosphonate metabolim protein, transferase hexapeptide repeat family.
Dde_3693 protein networkhttps://string-db.org/network/207559.Dde_3693PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVU0336 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
Dde_3694 protein networkhttps://string-db.org/network/207559.Dde_3694TIGRFAM: Glucose-1-phosphate cytidylyltransferase; KEGG: dvl:Dvul_2889 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase.
Dde_3695 protein networkhttps://string-db.org/network/207559.Dde_3695TIGRFAM: CDP-glucose 4,6-dehydratase; KEGG: dvl:Dvul_2888 CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
Dde_3696 protein networkhttps://string-db.org/network/207559.Dde_3696KEGG: dvm:DvMF_1910 polysaccharide biosynthesis domain-containing protein.
Dde_3697 protein networkhttps://string-db.org/network/207559.Dde_3697PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvm:DvMF_1911 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
Dde_3698 protein networkhttps://string-db.org/network/207559.Dde_3698PFAM: Glycosyl transferase, family 2; KEGG: dvu:DVU0076 glycosyl transferase group 2 family protein.
Dde_3699 protein networkhttps://string-db.org/network/207559.Dde_3699PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: dvm:DvMF_0846 hypothetical protein.
Dde_3700 protein networkhttps://string-db.org/network/207559.Dde_3700KEGG: vpe:Varpa_0123 hypothetical protein.
Dde_3701 protein networkhttps://string-db.org/network/207559.Dde_3701KEGG: dvm:DvMF_1888 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase.
Dde_3702 protein networkhttps://string-db.org/network/207559.Dde_3702KEGG: dma:DMR_26460 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type; SMART: Bacterial transcription activator, effect [...]
Dde_3703 protein networkhttps://string-db.org/network/207559.Dde_3703PFAM: Amino acid-binding ACT; KEGG: sfu:Sfum_2949 amino acid-binding ACT domain-containing protein.
Dde_3704 protein networkhttps://string-db.org/network/207559.Dde_3704PFAM: Protein of unknown function DUF711; KEGG: drt:Dret_0480 hypothetical protein.
Dde_3705 protein networkhttps://string-db.org/network/207559.Dde_3705KEGG: das:Daes_2035 export-like chaperone CsaA; TIGRFAM: Secretion chaperone CsaA; PFAM: tRNA-binding region.
Dde_3707 protein networkhttps://string-db.org/network/207559.Dde_3707KEGG: dvl:Dvul_2712 hypothetical protein.
Dde_3708 protein networkhttps://string-db.org/network/207559.Dde_3708Transmembrane complex, integral membrane protein; KEGG: dvm:DvMF_2556 hypothetical protein.
Dde_3709 protein networkhttps://string-db.org/network/207559.Dde_3709Transmembrane complex, ferredoxin, 2 (4Fe-4S); KEGG: dvl:Dvul_2714 hypothetical protein.
Dde_3710 protein networkhttps://string-db.org/network/207559.Dde_3710Transmembrane complex, tetraheme cytochrome c3; PFAM: Cytochrome c, class III; KEGG: dma:DMR_42490 cytochrome c3.
Dde_3711 protein networkhttps://string-db.org/network/207559.Dde_3711KEGG: dvm:DvMF_2553 hypothetical protein.
Dde_3712 protein networkhttps://string-db.org/network/207559.Dde_3712PFAM: UspA; KEGG: dvl:Dvul_2717 UspA domain-containing protein.
Dde_3713 protein networkhttps://string-db.org/network/207559.Dde_3713KEGG: dvl:Dvul_2718 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_3714 protein networkhttps://string-db.org/network/207559.Dde_3714KEGG: dvm:DvMF_2551 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
Dde_3715 protein networkhttps://string-db.org/network/207559.Dde_3715KEGG: dvl:Dvul_2720 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; PAS fold-4; ATP-binding region, ATPase-like; SMART: Signal tr [...]
Dde_3717 protein networkhttps://string-db.org/network/207559.Dde_3717KEGG: dvm:DvMF_2549 response regulator receiver sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; SMART: [...]
Dde_3718 protein networkhttps://string-db.org/network/207559.Dde_3718Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold-4; PAS fold; Signal transduction histidine kinase, subgroup 1, [...]
Dde_3719 protein networkhttps://string-db.org/network/207559.Dde_3719KEGG: dvm:DvMF_2547 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
Dde_3721 protein networkhttps://string-db.org/network/207559.Dde_3721KEGG: dvl:Dvul_1441 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
Dde_3722 protein networkhttps://string-db.org/network/207559.Dde_3722PFAM: Protein of unknown function DUF318, transmembrane; KEGG: dvm:DvMF_2282 permease.
Dde_3724 protein networkhttps://string-db.org/network/207559.Dde_3724KEGG: dvm:DvMF_0595 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
Dde_3725 protein networkhttps://string-db.org/network/207559.Dde_3725KEGG: dvl:Dvul_1232 phosphonate ABC transporter inner membrane protein; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
Dde_3726 protein networkhttps://string-db.org/network/207559.Dde_3726KEGG: dvm:DvMF_0597 phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter-like.
Dde_3727 protein networkhttps://string-db.org/network/207559.Dde_3727KEGG: dma:DMR_p1_00100 putative transposase for insertion sequence element.
Dde_3728 protein networkhttps://string-db.org/network/207559.Dde_3728KEGG: dvu:DVU2006 hypothetical protein.
Dde_3729 protein networkhttps://string-db.org/network/207559.Dde_3729PFAM: ABC transporter-like; KEGG: dvl:Dvul_1231 phosphonate ABC transporter ATPase.
Dde_3730 protein networkhttps://string-db.org/network/207559.Dde_3730TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dvl:Dvul_1230 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
Dde_3731 protein networkhttps://string-db.org/network/207559.Dde_3731Transcriptional regulator, DeoR family; KEGG: lip:LI0060 transcriptional regulators of sugar metabolism; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; [...]
Dde_3732 protein networkhttps://string-db.org/network/207559.Dde_3732KEGG: dvm:DvMF_0599 HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase.
Dde_3733 protein networkhttps://string-db.org/network/207559.Dde_3733KEGG: azl:AZL_e03080 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
Dde_3735 protein networkhttps://string-db.org/network/207559.Dde_3735PFAM: Alpha/beta hydrolase fold-1; KEGG: mac:MA1857 hypothetical protein.
Dde_3736 protein networkhttps://string-db.org/network/207559.Dde_3736SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dsa:Desal_3742 glyceraldehyde-3-phosphate dehydrogenase, t [...]
Dde_3737 protein networkhttps://string-db.org/network/207559.Dde_3737KEGG: dsa:Desal_3743 GAF sensor protein; PFAM: GAF; SMART: GAF.
Dde_3739 protein networkhttps://string-db.org/network/207559.Dde_3739KEGG: drt:Dret_1630 hypothetical protein.
Dde_3740 protein networkhttps://string-db.org/network/207559.Dde_3740PAS sensor protein; TIGRFAM: PAS; PFAM: Transcription regulator LuxR, C-terminal; PAS fold; KEGG: das:Daes_0841 regulatory protein LuxR; SMART: Transcription regulator LuxR, C-terminal.
Dde_3742 protein networkhttps://string-db.org/network/207559.Dde_3742ABC-type transporter, periplasmic subunit family 3; KEGG: das:Daes_0842 family 3 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular s [...]
Dde_3743 protein networkhttps://string-db.org/network/207559.Dde_3743KEGG: das:Daes_0843 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-depen [...]
Dde_3744 protein networkhttps://string-db.org/network/207559.Dde_3744Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: das:Daes_0844 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
Dde_3749 protein networkhttps://string-db.org/network/207559.Dde_3749KEGG: epy:EpC_06760 ATPase domain protein.
Dde_3752 protein networkhttps://string-db.org/network/207559.Dde_3752TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: azo:azo2622 hypothetical protein; SMART: Diguanylate cyclase, predicted.
Dde_3754 protein networkhttps://string-db.org/network/207559.Dde_3754PFAM: Cytochrome c, class III; KEGG: dvm:DvMF_1731 cytochrome c class III.
Dde_3755 protein networkhttps://string-db.org/network/207559.Dde_3755TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: dvl:Dvul_0719 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase- [...]
Dde_3756 protein networkhttps://string-db.org/network/207559.Dde_3756KEGG: dvm:DvMF_1733 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
Dde_3758 protein networkhttps://string-db.org/network/207559.Dde_3758KEGG: dvl:Dvul_2627 hypothetical protein.
Dde_3759 protein networkhttps://string-db.org/network/207559.Dde_3759Hypothetical protein.
Dde_3760 protein networkhttps://string-db.org/network/207559.Dde_3760PFAM: Uncharacterized protein family UPF0150; KEGG: dvu:DVU4002 hypothetical protein.
Dde_3766 protein networkhttps://string-db.org/network/207559.Dde_3766Glutaredoxin; KEGG: dsa:Desal_0889 glutaredoxin.
lgt protein networkhttps://string-db.org/network/207559.Dde_3768Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
infA2 protein networkhttps://string-db.org/network/207559.Dde_3769Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
Dde_3772 protein networkhttps://string-db.org/network/207559.Dde_3772KEGG: dvm:DvMF_2117 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
Dde_3773 protein networkhttps://string-db.org/network/207559.Dde_3773KEGG: dvl:Dvul_0115 hypothetical protein.
Dde_3774 protein networkhttps://string-db.org/network/207559.Dde_3774Protein of unknown function UPF0153; PFAM: Uncharacterized protein family UPF0153; KEGG: dvl:Dvul_0114 hypothetical protein.
Dde_3775 protein networkhttps://string-db.org/network/207559.Dde_3775PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: das:Daes_2030 ferredoxin I.
Dde_3776 protein networkhttps://string-db.org/network/207559.Dde_3776PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: dvm:DvMF_2121 2-alkenal reductase; SMART: PDZ/DHR/GLGF.
cobT protein networkhttps://string-db.org/network/207559.Dde_3777Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole ( [...]
Dde_3778 protein networkhttps://string-db.org/network/207559.Dde_3778SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dvm:DvMF_2110 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: [...]
Dde_3779 protein networkhttps://string-db.org/network/207559.Dde_3779KEGG: dvm:DvMF_2134 MerR family transcriptional regulator.
Dde_3780 protein networkhttps://string-db.org/network/207559.Dde_3780PFAM: Putitive phosphate transport regulator; KEGG: das:Daes_0822 putative phosphate transport regulator.
Dde_3781 protein networkhttps://string-db.org/network/207559.Dde_3781PFAM: Phosphate transporter; KEGG: das:Daes_0821 phosphate transporter.
Dde_3782 protein networkhttps://string-db.org/network/207559.Dde_3782Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisat [...]
Dde_3784 protein networkhttps://string-db.org/network/207559.Dde_3784PFAM: Peptidase M23; KEGG: dvm:DvMF_2080 peptidase M23.
Dde_4000 protein networkhttps://string-db.org/network/207559.Dde_4000PFAM: Glycosyl transferase, group 1; KEGG: drt:Dret_2032 glycosyl transferase group 1.
Dde_4001 protein networkhttps://string-db.org/network/207559.Dde_4001KEGG: das:Daes_1665 hypothetical protein.
queH protein networkhttps://string-db.org/network/207559.Dde_4002Protein of unknown function DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His [...]
Dde_4003 protein networkhttps://string-db.org/network/207559.Dde_4003KEGG: dvm:DvMF_1068 hypothetical protein.
Dde_4004 protein networkhttps://string-db.org/network/207559.Dde_4004PFAM: Protein of unknown function DUF2188; KEGG: dly:Dehly_1615 hypothetical protein.
Dde_4005 protein networkhttps://string-db.org/network/207559.Dde_4005Hypothetical protein.
Dde_4006 protein networkhttps://string-db.org/network/207559.Dde_4006KEGG: dvu:DVU0366 5-formyltetrahydrofolate cyclo-ligase family protein; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahy [...]
rpmF protein networkhttps://string-db.org/network/207559.Dde_4007TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: dvl:Dvul_1848 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family [...]
Dde_4008 protein networkhttps://string-db.org/network/207559.Dde_4008KEGG: dvm:DvMF_1941 hypothetical protein.
Dde_4009 protein networkhttps://string-db.org/network/207559.Dde_4009Hypothetical protein.
rpmG protein networkhttps://string-db.org/network/207559.Dde_4010TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: dvl:Dvul_0446 50S ribosomal protein L33; PFAM: Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
Dde_4011 protein networkhttps://string-db.org/network/207559.Dde_4011PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: dvm:DvMF_2126 excinuclease ABC C subunit domain protein.
Dde_4012 protein networkhttps://string-db.org/network/207559.Dde_4012KEGG: gbm:Gbem_3849 hypothetical protein.
Dde_4013 protein networkhttps://string-db.org/network/207559.Dde_4013KEGG: neu:NE0256 hypothetical protein.
Dde_4015 protein networkhttps://string-db.org/network/207559.Dde_4015KEGG: dly:Dehly_1687 hypothetical protein.
Dde_4016 protein networkhttps://string-db.org/network/207559.Dde_4016KEGG: dbr:Deba_1788 hypothetical protein.
Dde_4018 protein networkhttps://string-db.org/network/207559.Dde_4018KEGG: das:Daes_1643 hypothetical protein.
Dde_4019 protein networkhttps://string-db.org/network/207559.Dde_4019Hypothetical protein.
Dde_4020 protein networkhttps://string-db.org/network/207559.Dde_4020Hypothetical protein.
Dde_4021 protein networkhttps://string-db.org/network/207559.Dde_4021KEGG: dba:Dbac_1387 hypothetical protein.
Dde_4023 protein networkhttps://string-db.org/network/207559.Dde_4023Hypothetical protein.
Dde_4024 protein networkhttps://string-db.org/network/207559.Dde_4024Hypothetical protein.
Dde_4025 protein networkhttps://string-db.org/network/207559.Dde_4025KEGG: dvl:Dvul_0511 hypothetical protein.
Dde_4026 protein networkhttps://string-db.org/network/207559.Dde_4026PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_1224 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
Dde_4027 protein networkhttps://string-db.org/network/207559.Dde_4027KEGG: dvm:DvMF_0591 hypothetical protein.
Dde_4028 protein networkhttps://string-db.org/network/207559.Dde_4028Hypothetical protein.
Dde_4030 protein networkhttps://string-db.org/network/207559.Dde_4030KEGG: das:Daes_1635 hypothetical protein.
Dde_4031 protein networkhttps://string-db.org/network/207559.Dde_4031KEGG: dbr:Deba_1795 hypothetical protein.
Dde_4032 protein networkhttps://string-db.org/network/207559.Dde_4032KEGG: dly:Dehly_1658 hypothetical protein.
Dde_4033 protein networkhttps://string-db.org/network/207559.Dde_4033Hypothetical protein.
Dde_4034 protein networkhttps://string-db.org/network/207559.Dde_4034KEGG: geb:GM18_2958 hypothetical protein.
Dde_4036 protein networkhttps://string-db.org/network/207559.Dde_4036KEGG: dvm:DvMF_0264 hypothetical protein.
Dde_4037 protein networkhttps://string-db.org/network/207559.Dde_4037KEGG: dvm:DvMF_0114 hypothetical protein.
Dde_4038 protein networkhttps://string-db.org/network/207559.Dde_4038Hypothetical protein.
Dde_4040 protein networkhttps://string-db.org/network/207559.Dde_4040Hypothetical protein.
Dde_4041 protein networkhttps://string-db.org/network/207559.Dde_4041KEGG: dvm:DvMF_1079 hypothetical protein.
Dde_4042 protein networkhttps://string-db.org/network/207559.Dde_4042KEGG: dvm:DvMF_1382 hypothetical protein.
Dde_4043 protein networkhttps://string-db.org/network/207559.Dde_4043DGC domain protein; PFAM: DGC; KEGG: das:Daes_0506 DGC domain-containing protein.
Dde_4044 protein networkhttps://string-db.org/network/207559.Dde_4044KEGG: dsa:Desal_1109 hypothetical protein.
Dde_4046 protein networkhttps://string-db.org/network/207559.Dde_4046KEGG: dvm:DvMF_1466 hypothetical protein.
Dde_4047 protein networkhttps://string-db.org/network/207559.Dde_4047Hypothetical protein.
Dde_4050 protein networkhttps://string-db.org/network/207559.Dde_4050Hypothetical protein.
Dde_4052 protein networkhttps://string-db.org/network/207559.Dde_4052Hypothetical protein.
Dde_4053 protein networkhttps://string-db.org/network/207559.Dde_4053Hypothetical protein.
Dde_4054 protein networkhttps://string-db.org/network/207559.Dde_4054Hypothetical protein.
Dde_4055 protein networkhttps://string-db.org/network/207559.Dde_4055KEGG: dsa:Desal_2202 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
Dde_4056 protein networkhttps://string-db.org/network/207559.Dde_4056PFAM: Protein of unknown function DUF448; KEGG: dvm:DvMF_2514 hypothetical protein.
Dde_4057 protein networkhttps://string-db.org/network/207559.Dde_4057TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: rpf:Rpic12D_0630 excisionase family DNA binding domain-containing protein.