Organism Overview: Sodalis pierantonius


 
gidA protein networkhttps://string-db.org/network/2342.SOPEG_0001tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
gidB protein networkhttps://string-db.org/network/2342.SOPEG_0002rRNA small subunit methyltransferase-2C glucose inhibited division protein GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
atpI protein networkhttps://string-db.org/network/2342.SOPEG_0003COG3312 F0F1-type ATP synthase, subunit I.
atpB protein networkhttps://string-db.org/network/2342.SOPEG_0004ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
atpE protein networkhttps://string-db.org/network/2342.SOPEG_0005ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembra [...]
atpF protein networkhttps://string-db.org/network/2342.SOPEG_0006ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
atpH protein networkhttps://string-db.org/network/2342.SOPEG_0007ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extrame [...]
atpA protein networkhttps://string-db.org/network/2342.SOPEG_0008ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
atpG protein networkhttps://string-db.org/network/2342.SOPEG_0009ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of [...]
atpD protein networkhttps://string-db.org/network/2342.SOPEG_0010ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
atpC protein networkhttps://string-db.org/network/2342.SOPEG_0011ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
AHF72820.1 protein networkhttps://string-db.org/network/2342.SOPEG_0012Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
glmU protein networkhttps://string-db.org/network/2342.SOPEG_0016Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catal [...]
glmS protein networkhttps://string-db.org/network/2342.SOPEG_0017Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
SOPEG_0022 protein networkhttps://string-db.org/network/2342.SOPEG_0022Phage transcriptional regulator; ISSoEn1, terminal inverted repeat.
AHF72825.1 protein networkhttps://string-db.org/network/2342.SOPEG_0023COG3617 Prophage antirepressor.
SOPEG_0033 protein networkhttps://string-db.org/network/2342.SOPEG_0033COG1783 Phage terminase large subunit; phage terminase large subunit.
AHF72831.1 protein networkhttps://string-db.org/network/2342.SOPEG_0034Phage protein; COG2369 Uncharacterized protein, homolog of phage Mu protein gp30.
AHF72832.1 protein networkhttps://string-db.org/network/2342.SOPEG_0035Phage protein; COG3566 Uncharacterized protein conserved in bacteria.
AHF72833.1 protein networkhttps://string-db.org/network/2342.SOPEG_0036Phage protein.
SOPEG_0040 protein networkhttps://string-db.org/network/2342.SOPEG_0040Phage protein.
AHF72836.1 protein networkhttps://string-db.org/network/2342.SOPEG_0041Phage protein.
AHF72837.1 protein networkhttps://string-db.org/network/2342.SOPEG_0042Phage protein.
SOPEG_0046 protein networkhttps://string-db.org/network/2342.SOPEG_0046Putative bacteriophage protein.
AHF72840.1 protein networkhttps://string-db.org/network/2342.SOPEG_0047Putative bacteriophage protein.
SOPEG_0060 protein networkhttps://string-db.org/network/2342.SOPEG_0060Lysozyme.
rsmB protein networkhttps://string-db.org/network/2342.SOPEG_0061Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
mscL protein networkhttps://string-db.org/network/2342.SOPEG_0064Uncharacterized protein; COG1970 Large-conductance mechanosensitive channel; Large-conductance mechanosensitive channel.
AHF72846.1 protein networkhttps://string-db.org/network/2342.SOPEG_0065Putative cytoplasmic protein.
rplQ protein networkhttps://string-db.org/network/2342.SOPEG_007050S ribosomal protein L17; COG0666 FOG: Ankyrin repeat; hypothetical protein.
rpoA protein networkhttps://string-db.org/network/2342.SOPEG_0071DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsD protein networkhttps://string-db.org/network/2342.SOPEG_0072SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/2342.SOPEG_0073SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosom [...]
rpsM protein networkhttps://string-db.org/network/2342.SOPEG_0074SSU ribosomal protein S13p (S18e); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and pr [...]
rpmJ1 protein networkhttps://string-db.org/network/2342.SOPEG_0075COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
secY protein networkhttps://string-db.org/network/2342.SOPEG_0076Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...]
rplO protein networkhttps://string-db.org/network/2342.SOPEG_0077LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpmD protein networkhttps://string-db.org/network/2342.SOPEG_0078LSU ribosomal protein L30p (L7e); COG1841 Ribosomal protein L30/L7E.
rpsE protein networkhttps://string-db.org/network/2342.SOPEG_0079SSU ribosomal protein S5p (S2e); Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein [...]
rplR protein networkhttps://string-db.org/network/2342.SOPEG_0080LSU ribosomal protein L18p (L5e); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central pr [...]
rplF protein networkhttps://string-db.org/network/2342.SOPEG_0081LSU ribosomal protein L6p (L9e); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and nea [...]
rpsH protein networkhttps://string-db.org/network/2342.SOPEG_0082SSU ribosomal protein S8p (S15Ae); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Be [...]
rpsN protein networkhttps://string-db.org/network/2342.SOPEG_0083SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs t [...]
rplE protein networkhttps://string-db.org/network/2342.SOPEG_0084LSU ribosomal protein L5p (L11e); This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central prot [...]
rplX protein networkhttps://string-db.org/network/2342.SOPEG_0085LSU ribosomal protein L24p (L26e); One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplN protein networkhttps://string-db.org/network/2342.SOPEG_0086LSU ribosomal protein L14p (L23e); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/2342.SOPEG_0087SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/2342.SOPEG_0088LSU ribosomal protein L29p (L35e); COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/2342.SOPEG_0089LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/2342.SOPEG_0090SSU ribosomal protein S3p (S3e); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 famil [...]
rplV protein networkhttps://string-db.org/network/2342.SOPEG_0091LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines [...]
rpsS protein networkhttps://string-db.org/network/2342.SOPEG_0092SSU ribosomal protein S19p (S15e); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/2342.SOPEG_0093LSU ribosomal protein L2p (L8e); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formati [...]
rplW protein networkhttps://string-db.org/network/2342.SOPEG_0094LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the [...]
rplD protein networkhttps://string-db.org/network/2342.SOPEG_0095LSU ribosomal protein L4p (L1e); Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/2342.SOPEG_0096LSU ribosomal protein L3p (L3e); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rpsJ protein networkhttps://string-db.org/network/2342.SOPEG_0097SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
bfrA protein networkhttps://string-db.org/network/2342.SOPEG_0098Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation wit [...]
bfd protein networkhttps://string-db.org/network/2342.SOPEG_0099COG2906 Bacterioferritin-associated ferredoxin.
SOPEG_0105 protein networkhttps://string-db.org/network/2342.SOPEG_0105Uncharacterized protein; Helper of transposition ISSoEn3, IS21 family.
AHF72878.1 protein networkhttps://string-db.org/network/2342.SOPEG_0106Ner-like regulatory protein; COG3423 Predicted transcriptional regulator.
kdsC protein networkhttps://string-db.org/network/2342.SOPEG_01113-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phos [...]
lptC protein networkhttps://string-db.org/network/2342.SOPEG_0112Uncharacterized protein YrbK; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer o [...]
lptA protein networkhttps://string-db.org/network/2342.SOPEG_0113LptA protein essential for LPS transport across the periplasm; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer mem [...]
lptB protein networkhttps://string-db.org/network/2342.SOPEG_0114Lipopolysaccharide ABC transporter ATP-binding protein LptB; COG1137 ABC-type (unclassified) transport system, ATPase component.
hpf protein networkhttps://string-db.org/network/2342.SOPEG_0116Putative sigma(54) modulation protein; COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54.
ptsN protein networkhttps://string-db.org/network/2342.SOPEG_0117PTS system nitrogen-specific IIA component PtsN; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
yhbJ protein networkhttps://string-db.org/network/2342.SOPEG_0118Putative ATP-binding protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations ar [...]
npr protein networkhttps://string-db.org/network/2342.SOPEG_0119Phosphocarrier protein nitrogen regulation associated; COG1925 Phosphotransferase system, HPr-related proteins.
SOPEG_0128 protein networkhttps://string-db.org/network/2342.SOPEG_0128TP901 family phage tail tape measure protein.
AHF72891.1 protein networkhttps://string-db.org/network/2342.SOPEG_0129Hypothetical protein; COG3299 Uncharacterized homolog of phage Mu protein gp47.
AHF72892.1 protein networkhttps://string-db.org/network/2342.SOPEG_0130Putative bacteriophage protein.
SOPEG_0134 protein networkhttps://string-db.org/network/2342.SOPEG_0134Uncharacterized protein; Target site duplication generated by insertion of ISSoEn1.
mok1 protein networkhttps://string-db.org/network/2342.SOPEG_0140sok_RNA; Blocks mokB and hokB translation.
hok1 protein networkhttps://string-db.org/network/2342.SOPEG_0141Small toxic membrane protein HokA.
SOPEG_0160 protein networkhttps://string-db.org/network/2342.SOPEG_0160Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
kdsD protein networkhttps://string-db.org/network/2342.SOPEG_0161Arabinose 5-phosphate isomerase; COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
yrbG protein networkhttps://string-db.org/network/2342.SOPEG_0162Inner membrane protein YrbG predicted calcium/sodium:proton antiporter; COG0530 Ca2+/Na+ antiporter.
mlaF protein networkhttps://string-db.org/network/2342.SOPEG_0163Putative ABC transporter ATP-binding protein YrbF; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
mlaE protein networkhttps://string-db.org/network/2342.SOPEG_0164COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
mlaD protein networkhttps://string-db.org/network/2342.SOPEG_0165COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
mlaC protein networkhttps://string-db.org/network/2342.SOPEG_0166COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
mlaB protein networkhttps://string-db.org/network/2342.SOPEG_0167Uncharacterized protein YrbB; COG3113 Predicted NTP binding protein (contains STAS domain).
yrbA protein networkhttps://string-db.org/network/2342.SOPEG_0168YrbA protein; COG5007 Predicted transcriptional regulator, BolA superfamily; Belongs to the BolA/IbaG family.
murA protein networkhttps://string-db.org/network/2342.SOPEG_0169UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
degS protein networkhttps://string-db.org/network/2342.SOPEG_0170Outer membrane stress sensor protease DegS; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
degQ protein networkhttps://string-db.org/network/2342.SOPEG_0171Outer membrane stress sensor protease DegQ serine protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
yhcB protein networkhttps://string-db.org/network/2342.SOPEG_0172Putative cytochrome d ubiquinol oxidase subunit III (Cytochrome bd-I oxidase subunit III); COG3105 Uncharacterized protein conserved in bacteria.
yhcM protein networkhttps://string-db.org/network/2342.SOPEG_0173ATPase AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP.
rplM protein networkhttps://string-db.org/network/2342.SOPEG_0174LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the ear [...]
rpsI protein networkhttps://string-db.org/network/2342.SOPEG_0175SSU ribosomal protein S9p (S16e); COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
sspA protein networkhttps://string-db.org/network/2342.SOPEG_0176Stringent starvation protein A; COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
sspB protein networkhttps://string-db.org/network/2342.SOPEG_0177ClpXP protease specificity-enhancing factor / Stringent starvation protein B; COG2969 Stringent starvation protein B.
gltD protein networkhttps://string-db.org/network/2342.SOPEG_0178COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
arcB protein networkhttps://string-db.org/network/2342.SOPEG_0181Aerobic respiration control sensor protein; COG1242 Predicted Fe-S oxidoreductase; putative Fe-S oxidoreductase.
elbB protein networkhttps://string-db.org/network/2342.SOPEG_0182Sigma cross-reacting protein 27A; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.
mtgA protein networkhttps://string-db.org/network/2342.SOPEG_0183Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 fam [...]
yraP protein networkhttps://string-db.org/network/2342.SOPEG_018421 kDa hemolysin precursor; COG2823 Predicted periplasmic or secreted lipoprotein.
diaA protein networkhttps://string-db.org/network/2342.SOPEG_0185DnaA initiator-associating protein DiaA; COG0279 Phosphoheptose isomerase.
rsmI protein networkhttps://string-db.org/network/2342.SOPEG_0187Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
yhaK protein networkhttps://string-db.org/network/2342.SOPEG_0188Pirin-like protein YhaK; COG1741 Pirin-related protein; Belongs to the pirin family.
yhaJ protein networkhttps://string-db.org/network/2342.SOPEG_0189COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
yqjG protein networkhttps://string-db.org/network/2342.SOPEG_0190COG0435 Predicted glutathione S-transferase.
yqjF protein networkhttps://string-db.org/network/2342.SOPEG_0191COG2259 Predicted membrane protein.
nemR protein networkhttps://string-db.org/network/2342.SOPEG_0192COG1309 Transcriptional regulator.
AHF72934.1 protein networkhttps://string-db.org/network/2342.SOPEG_0193ThiJ/PfpI domain protein; COG0693 Putative intracellular protease/amidase.
yqjK1 protein networkhttps://string-db.org/network/2342.SOPEG_0196YqjK1; ISSoEn3, terminal inverted repeat.
yqjE1 protein networkhttps://string-db.org/network/2342.SOPEG_0197Inner membrane protein YqjE.
yqjD1 protein networkhttps://string-db.org/network/2342.SOPEG_0198Putative membrane protein YqjD.
yqjB1 protein networkhttps://string-db.org/network/2342.SOPEG_0199EnvZ/OmpR regulon moderator; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphory [...]
yqjA1 protein networkhttps://string-db.org/network/2342.SOPEG_0200DedA family inner membrane protein YqjA; COG0586 Uncharacterized membrane-associated protein.
SOPEG_0203 protein networkhttps://string-db.org/network/2342.SOPEG_0203Mutator family transposase; Required for the transposition of the insertion element.
AHF72941.1 protein networkhttps://string-db.org/network/2342.SOPEG_0204Helper of transposition ISSoEn3, IS21 family.
AHF72942.1 protein networkhttps://string-db.org/network/2342.SOPEG_0205Transposase ISSoEn3, IS21 family.
SOPEG_0209 protein networkhttps://string-db.org/network/2342.SOPEG_0209Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF72945.1 protein networkhttps://string-db.org/network/2342.SOPEG_0210Transposase ISSoEn1, IS5 ssgr IS903 family.
AHF72946.1 protein networkhttps://string-db.org/network/2342.SOPEG_0211Transposase ISSoEn1, IS5 ssgr IS903 family.
yhbP protein networkhttps://string-db.org/network/2342.SOPEG_0216UPF0306 protein SOPEG_0216; Belongs to the UPF0306 family.
yaiW protein networkhttps://string-db.org/network/2342.SOPEG_0218DUF2382 domain-containing protein; Potential frameshift: common BLAST hit: gi|291616779|ref|YP_003519521.1| YaiW; Putative outer membrane lipoprotein.
exuT1 protein networkhttps://string-db.org/network/2342.SOPEG_0225Hexuronate transporter; Potential frameshift: common BLAST hit: gi|50119592|ref|YP_048759.1| DNA-binding transcriptional repressor ExuR; DNA-binding transcriptional repressor ExuR.
uxaC1 protein networkhttps://string-db.org/network/2342.SOPEG_0227Putative regulatory protein; COG1904 Glucuronate isomerase; D-glucuronate isomerase / D-galacturonate isomerase.
AHF72952.1 protein networkhttps://string-db.org/network/2342.SOPEG_0228Ner-like regulatory protein; COG3423 Predicted transcriptional regulator.
SOPEG_0230 protein networkhttps://string-db.org/network/2342.SOPEG_0230Mu phage DNA transposition protein B; Mu family.
tufA protein networkhttps://string-db.org/network/2342.SOPEG_0236Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
fusA protein networkhttps://string-db.org/network/2342.SOPEG_0237Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- [...]
rpsG protein networkhttps://string-db.org/network/2342.SOPEG_0238SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subun [...]
rpsL protein networkhttps://string-db.org/network/2342.SOPEG_0239SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of th [...]
tusB protein networkhttps://string-db.org/network/2342.SOPEG_0240tRNA 5-methylaminomethyl-2-thiouridine synthase TusB; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.
tusC protein networkhttps://string-db.org/network/2342.SOPEG_0241tRNA 5-methylaminomethyl-2-thiouridine synthase TusC; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.
tusD protein networkhttps://string-db.org/network/2342.SOPEG_0242tRNA 5-methylaminomethyl-2-thiouridine synthase TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts [...]
fkpA protein networkhttps://string-db.org/network/2342.SOPEG_0244Peptidyl-prolyl cis-trans isomerase; Potential frameshift: common BLAST hit: gi|261823244|ref|YP_003261350.1| YheO domain protein; YheO domain protein.
slyX protein networkhttps://string-db.org/network/2342.SOPEG_0245Protein slyX; COG=COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.
slyD protein networkhttps://string-db.org/network/2342.SOPEG_0246COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2.
yheV protein networkhttps://string-db.org/network/2342.SOPEG_0247Putative cytoplasmic protein probably associated with Glutathione-regulated potassium-efflux; COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
crp protein networkhttps://string-db.org/network/2342.SOPEG_0253Cyclic AMP receptor protein; COG1765 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein.
argD protein networkhttps://string-db.org/network/2342.SOPEG_0257Acetylornithine/succinyldiaminopimelate aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase f [...]
pabA protein networkhttps://string-db.org/network/2342.SOPEG_0258COG0512 Anthranilate/para-aminobenzoate synthases component II.
fic protein networkhttps://string-db.org/network/2342.SOPEG_0260Mutator family transposase; Required for the transposition of the insertion element.
yhfG protein networkhttps://string-db.org/network/2342.SOPEG_0261yhfG.
tsgA protein networkhttps://string-db.org/network/2342.SOPEG_0263Putative transporter; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A (rotamase A).
trpS protein networkhttps://string-db.org/network/2342.SOPEG_0268Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
gph protein networkhttps://string-db.org/network/2342.SOPEG_0269Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA r [...]
rpe protein networkhttps://string-db.org/network/2342.SOPEG_0270COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
dam protein networkhttps://string-db.org/network/2342.SOPEG_0271Methyl-directed repair DNA adenine methylase; COG0338 Site-specific DNA methylase.
damX protein networkhttps://string-db.org/network/2342.SOPEG_0272DamX an inner membrane protein involved in bile resistance; Non-essential cell division protein.
aroB protein networkhttps://string-db.org/network/2342.SOPEG_02733-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
aroK protein networkhttps://string-db.org/network/2342.SOPEG_0274Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
nudE protein networkhttps://string-db.org/network/2342.SOPEG_0281Adenosine nucleotide hydrolase NudE; COG5009 Membrane carboxypeptidase/penicillin-binding protein; Multimodular transpeptidase-transglycosylase.
hslR protein networkhttps://string-db.org/network/2342.SOPEG_0284Heat shock protein 15; COG1011 Predicted hydrolase (HAD superfamily); GMP/IMP nucleotidase; Belongs to the HSP15 family.
hslO protein networkhttps://string-db.org/network/2342.SOPEG_0285Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacter [...]
pck protein networkhttps://string-db.org/network/2342.SOPEG_0286Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucl [...]
envZ protein networkhttps://string-db.org/network/2342.SOPEG_0287Osmolarity sensory histidine kinase EnvZ; COG0642 Signal transduction histidine kinase.
ompR protein networkhttps://string-db.org/network/2342.SOPEG_0288Two-component system response regulator OmpR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
yhgF protein networkhttps://string-db.org/network/2342.SOPEG_0290Transcription accessory protein (S1 RNA-binding domain); COG0782 Transcription elongation factor; transcription elongation factor GreA.
feoA protein networkhttps://string-db.org/network/2342.SOPEG_0291COG1918 Fe2+ transport system protein A.
feoB protein networkhttps://string-db.org/network/2342.SOPEG_0292Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) [...]
feoC protein networkhttps://string-db.org/network/2342.SOPEG_0293Ferrous iron-sensisng transcriptional regulator FeoC; May function as a transcriptional regulator that controls feoABC expression.
nfuA protein networkhttps://string-db.org/network/2342.SOPEG_0297Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S protei [...]
malQ protein networkhttps://string-db.org/network/2342.SOPEG_0298COG1640 4-alpha-glucanotransferase.
malP protein networkhttps://string-db.org/network/2342.SOPEG_0299Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural s [...]
glpR protein networkhttps://string-db.org/network/2342.SOPEG_0300Glycerol-3-phosphate regulon repressor DeoR family; COG1349 Transcriptional regulators of sugar metabolism.
glpG protein networkhttps://string-db.org/network/2342.SOPEG_0301Intramembrane serine protease GlpG; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
glpE protein networkhttps://string-db.org/network/2342.SOPEG_0302Thiosulfate sulfurtransferase GlpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
asd protein networkhttps://string-db.org/network/2342.SOPEG_0311Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
yhgN protein networkhttps://string-db.org/network/2342.SOPEG_0312COG2095 Multiple antibiotic transporter.
gntU protein networkhttps://string-db.org/network/2342.SOPEG_0313High-affinity gluconate transporter; COG2610 H+/gluconate symporter and related permeases.
gntR protein networkhttps://string-db.org/network/2342.SOPEG_0314Gluconate utilization system Gnt-I transcriptional repressor; COG1609 Transcriptional regulators.
pldA protein networkhttps://string-db.org/network/2342.SOPEG_0320Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
yigI protein networkhttps://string-db.org/network/2342.SOPEG_0321COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
rarD protein networkhttps://string-db.org/network/2342.SOPEG_0322Chloramphenicol-sensitive protein RarD; COG2962 Predicted permeases.
uvrD protein networkhttps://string-db.org/network/2342.SOPEG_0325DNA-dependent helicase II; COG0210 Superfamily I DNA and RNA helicases.
AHF73007.1 protein networkhttps://string-db.org/network/2342.SOPEG_0326Transposase ISSoEn4, ISL3 family.
yigB protein networkhttps://string-db.org/network/2342.SOPEG_0327Flavin mononucleotide phosphatase; COG1011 Predicted hydrolase (HAD superfamily).
xerC protein networkhttps://string-db.org/network/2342.SOPEG_0328Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific D [...]
yigA protein networkhttps://string-db.org/network/2342.SOPEG_0329yigA; COG3159 Uncharacterized protein conserved in bacteria.
dapF protein networkhttps://string-db.org/network/2342.SOPEG_0330Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
yifL protein networkhttps://string-db.org/network/2342.SOPEG_0331Putative lipoprotein; COG5567 Predicted small periplasmic lipoprotein.
cyaA protein networkhttps://string-db.org/network/2342.SOPEG_0332COG3072 Adenylate cyclase; Belongs to the adenylyl cyclase class-1 family.
hemC protein networkhttps://string-db.org/network/2342.SOPEG_0333Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
hemD protein networkhttps://string-db.org/network/2342.SOPEG_0334uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
hemX protein networkhttps://string-db.org/network/2342.SOPEG_0335Putative uroporphyrinogen III C-methyltransferase; COG2959 Uncharacterized enzyme of heme biosynthesis.
hemY protein networkhttps://string-db.org/network/2342.SOPEG_0336Putative protoheme IX biogenesis protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
AHF73018.1 protein networkhttps://string-db.org/network/2342.SOPEG_03375-carboxymethyl-2-hydroxymuconate Delta-isomerase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
SOPEG_0342 protein networkhttps://string-db.org/network/2342.SOPEG_0342COG0191 Fructose/tagatose bisphosphate aldolase; hypothetical protein.
bglG protein networkhttps://string-db.org/network/2342.SOPEG_0349Transposase ISSoEn3, IS21 family.
AHF73021.1 protein networkhttps://string-db.org/network/2342.SOPEG_0350Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
aroE protein networkhttps://string-db.org/network/2342.SOPEG_0352Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-de [...]
rimN protein networkhttps://string-db.org/network/2342.SOPEG_0353YrdC/Sua5 family protein required for threonylcarbamoyladenosine (t(6)A) formation in tRNA; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs [...]
yrdD protein networkhttps://string-db.org/network/2342.SOPEG_0354Putative DNA topoisomerase; COG0551 Zn-finger domain associated with topoisomerase type I.
smg protein networkhttps://string-db.org/network/2342.SOPEG_0355Protein of unknown function Smg; COG2922 Uncharacterized protein conserved in bacteria; Belongs to the Smg family.
def protein networkhttps://string-db.org/network/2342.SOPEG_0357Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
fmt protein networkhttps://string-db.org/network/2342.SOPEG_0358methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
rffM protein networkhttps://string-db.org/network/2342.SOPEG_0373tRNA-Arg; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.
wecF protein networkhttps://string-db.org/network/2342.SOPEG_0374Putative common antigen polymerase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltra [...]
wzxE protein networkhttps://string-db.org/network/2342.SOPEG_0375O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of ente [...]
rffA protein networkhttps://string-db.org/network/2342.SOPEG_0376TDP-4-oxo-6-deoxy-D-glucose transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
rffC protein networkhttps://string-db.org/network/2342.SOPEG_0377TDP-fucosamine acetyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacteria [...]
rffH protein networkhttps://string-db.org/network/2342.SOPEG_0378Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymid [...]
rffG protein networkhttps://string-db.org/network/2342.SOPEG_0379dTDP-D-glucose-4,6-dehydratase; COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
rffD protein networkhttps://string-db.org/network/2342.SOPEG_0380UDP-glucose dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belon [...]
rffE protein networkhttps://string-db.org/network/2342.SOPEG_0381COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
wzzE protein networkhttps://string-db.org/network/2342.SOPEG_0382Regulator of length of O-antigen component of lipopolysaccharide chains; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
rfe protein networkhttps://string-db.org/network/2342.SOPEG_0383Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C [...]
rho protein networkhttps://string-db.org/network/2342.SOPEG_0384Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
trxA protein networkhttps://string-db.org/network/2342.SOPEG_0385Thioredoxin 1; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
rhlB protein networkhttps://string-db.org/network/2342.SOPEG_0386ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. Rh [...]
gppA protein networkhttps://string-db.org/network/2342.SOPEG_0387Guanosine-5'-triphosphate-3'-diphosphate pyrophosphatase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with pp [...]
rep protein networkhttps://string-db.org/network/2342.SOPEG_0388ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded [...]
ilvC protein networkhttps://string-db.org/network/2342.SOPEG_0389Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...]
ilvY protein networkhttps://string-db.org/network/2342.SOPEG_0390COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
ilvE protein networkhttps://string-db.org/network/2342.SOPEG_0393Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
ilvM protein networkhttps://string-db.org/network/2342.SOPEG_0394COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit.
fliC1 protein networkhttps://string-db.org/network/2342.SOPEG_0399Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
fliC2 protein networkhttps://string-db.org/network/2342.SOPEG_0401ISSoEn1, terminal inverted repeat.
fliF1 protein networkhttps://string-db.org/network/2342.SOPEG_0406Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
fliG1 protein networkhttps://string-db.org/network/2342.SOPEG_0407Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex int [...]
fliH1 protein networkhttps://string-db.org/network/2342.SOPEG_0408Flagellar assembly protein FliH; COG1317 Flagellar biosynthesis/type III secretory pathway protein.
fliI1 protein networkhttps://string-db.org/network/2342.SOPEG_0409Flagellum-specific ATP synthase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
fliK1 protein networkhttps://string-db.org/network/2342.SOPEG_0411Flagellar hook-length control protein FliK; Flagellar biosynthesis protein FliJ.
fliL1 protein networkhttps://string-db.org/network/2342.SOPEG_0412Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
fliM1 protein networkhttps://string-db.org/network/2342.SOPEG_0413Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex int [...]
fliN1 protein networkhttps://string-db.org/network/2342.SOPEG_0414Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex inte [...]
fliO1 protein networkhttps://string-db.org/network/2342.SOPEG_0415COG3190 Flagellar biogenesis protein.
fliP1 protein networkhttps://string-db.org/network/2342.SOPEG_0416Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
fliR1 protein networkhttps://string-db.org/network/2342.SOPEG_0418Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
flgL1 protein networkhttps://string-db.org/network/2342.SOPEG_0419Flagellar biosynthesis; COG1344 Flagellin and related hook-associated proteins.
flgK1 protein networkhttps://string-db.org/network/2342.SOPEG_0420COG1256 Flagellar hook-associated protein.
flgI protein networkhttps://string-db.org/network/2342.SOPEG_0422Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
flgG1 protein networkhttps://string-db.org/network/2342.SOPEG_0424Flagellar basal-body rod protein FlgG; COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein; Belongs to the flagella basal body rod proteins family.
flgF1 protein networkhttps://string-db.org/network/2342.SOPEG_0425COG4787 Flagellar basal body rod protein.
flgE1 protein networkhttps://string-db.org/network/2342.SOPEG_0426COG1749 Flagellar hook protein FlgE.
flgD1 protein networkhttps://string-db.org/network/2342.SOPEG_0427Flagellar biosynthesis, initiation of hook assembly; Required for flagellar hook formation. May act as a scaffolding protein.
flgM1 protein networkhttps://string-db.org/network/2342.SOPEG_0431Anti-sigma factor for FliA (Sigma 28); COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar biosynthesis; assembly of basal-body periplasmic P ring.
flgN1 protein networkhttps://string-db.org/network/2342.SOPEG_0432Flagellar biosynthesis protein FlgN.
flhA1 protein networkhttps://string-db.org/network/2342.SOPEG_0433Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs [...]
motB1 protein networkhttps://string-db.org/network/2342.SOPEG_0435Flagellar motor protein MotB; Potential frameshift: common BLAST hit: gi|85058003|ref|YP_453705.1| flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB.
motA1 protein networkhttps://string-db.org/network/2342.SOPEG_0437ISSoEn1, terminal inverted repeat.
flhC1 protein networkhttps://string-db.org/network/2342.SOPEG_0438Flagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by bind [...]
fliA protein networkhttps://string-db.org/network/2342.SOPEG_0445RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls [...]
dppD protein networkhttps://string-db.org/network/2342.SOPEG_0449Dipeptide transport ATP-binding protein DppD; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Dipeptide transport system permease protein DppC; Belongs to t [...]
bcsA1 protein networkhttps://string-db.org/network/2342.SOPEG_0470ISSoEn1, terminal inverted repeat.
AHF73086.1 protein networkhttps://string-db.org/network/2342.SOPEG_0471Transposase ISSoEn1, IS5 ssgr IS903 family.
SOPEG_0473 protein networkhttps://string-db.org/network/2342.SOPEG_0473ISSoEn1, terminal inverted repeat.
codB1 protein networkhttps://string-db.org/network/2342.SOPEG_0478ISSoEn2, terminal inverted repeat.
AHF73089.1 protein networkhttps://string-db.org/network/2342.SOPEG_0479Transposase ISSoEn1, IS5 ssgr IS903 family.
gpmA protein networkhttps://string-db.org/network/2342.SOPEG_04832,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- depende [...]
galK protein networkhttps://string-db.org/network/2342.SOPEG_0484Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
galE protein networkhttps://string-db.org/network/2342.SOPEG_0486UDP-glucose 4-epimerase; COG1085 Galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
modF protein networkhttps://string-db.org/network/2342.SOPEG_0487COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA.
modE protein networkhttps://string-db.org/network/2342.SOPEG_0489Multidrug efflux pump accessory protein AcrZ; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of som [...]
ddl protein networkhttps://string-db.org/network/2342.SOPEG_0490D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
pgl protein networkhttps://string-db.org/network/2342.SOPEG_04926-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate.
SOPEG_0494 protein networkhttps://string-db.org/network/2342.SOPEG_0494ThiJ/PfpI family protein; COG1881 Phospholipid-binding protein; putative kinase inhibitor protein.
uvrB protein networkhttps://string-db.org/network/2342.SOPEG_0502UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnorm [...]
ybhK protein networkhttps://string-db.org/network/2342.SOPEG_0503Hypothetical protein UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
moaA protein networkhttps://string-db.org/network/2342.SOPEG_0504Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
rhlE protein networkhttps://string-db.org/network/2342.SOPEG_0511ATP-dependent RNA helicase RhlE; COG1126 ABC-type polar amino acid transport system, ATPase component; putative amino-acid ABC transporter ATP-binding protein YecC; Belongs to the DEAD box helica [...]
glnH protein networkhttps://string-db.org/network/2342.SOPEG_0514ABC-type amino acid transport/signal transduction systems periplasmic component/domain protein; COG0500 SAM-dependent methyltransferases; SAM-dependent methyltransferase; Belongs to the bacterial [...]
glnQ protein networkhttps://string-db.org/network/2342.SOPEG_0515Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
AHF73106.1 protein networkhttps://string-db.org/network/2342.SOPEG_0516Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
glnP protein networkhttps://string-db.org/network/2342.SOPEG_0517Glutamate transport membrane-spanning protein; COG0765 ABC-type amino acid transport system, permease component.
AHF73108.1 protein networkhttps://string-db.org/network/2342.SOPEG_0518COG1846 Transcriptional regulators.
AHF73109.1 protein networkhttps://string-db.org/network/2342.SOPEG_0519COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
nodT protein networkhttps://string-db.org/network/2342.SOPEG_0524Outer membrane component of tripartite multidrug resistance system; COG1538 Outer membrane protein.
emrB protein networkhttps://string-db.org/network/2342.SOPEG_0525Inner membrane component of tripartite multidrug resistance system; COG0477 Permeases of the major facilitator superfamily.
dinG protein networkhttps://string-db.org/network/2342.SOPEG_0537ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase.
AHF73116.1 protein networkhttps://string-db.org/network/2342.SOPEG_0538COG2808 Transcriptional regulator.
SOPEG_0540 protein networkhttps://string-db.org/network/2342.SOPEG_0540Putative peptidase; COG0547 Anthranilate phosphoribosyltransferase; glycosyl transferase family protein.
AHF73119.1 protein networkhttps://string-db.org/network/2342.SOPEG_0545COG1734 DnaK suppressor protein.
dps protein networkhttps://string-db.org/network/2342.SOPEG_0546DNA starvation/stationary phase protection protein Dps; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
ompX protein networkhttps://string-db.org/network/2342.SOPEG_0547Outer membrane protein X; COG3637 Opacity protein and related surface antigens.
ybiT protein networkhttps://string-db.org/network/2342.SOPEG_0548COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
iaaA protein networkhttps://string-db.org/network/2342.SOPEG_0552Isoaspartyl aminopeptidase; COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein MoeA.
gsiC protein networkhttps://string-db.org/network/2342.SOPEG_0555Glutathione ABC transporter permease GsiC; COG0747 ABC-type dipeptide transport system, periplasmic component; glutathione ABC transporter substrate-binding protein GsiB.
SOPEG_0559 protein networkhttps://string-db.org/network/2342.SOPEG_0559Outer membrane lipoprotein e (P4); Target site duplication generated by insertion of ISSoEn3.
yliI protein networkhttps://string-db.org/network/2342.SOPEG_0560Soluble aldose sugar dehydrogenase PQQ-dependent; COG2133 Glucose/sorbosone dehydrogenases.
dacC protein networkhttps://string-db.org/network/2342.SOPEG_0563D-alanyl-D-alanine carboxypeptidase; Target site duplication generated by insertion of ISSoEn2; Belongs to the peptidase S11 family.
potF protein networkhttps://string-db.org/network/2342.SOPEG_0570Putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial s [...]
potG protein networkhttps://string-db.org/network/2342.SOPEG_0571Putrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
potH protein networkhttps://string-db.org/network/2342.SOPEG_0572Putrescine transporter subunit: membrane component of ABC superfamily; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
potI protein networkhttps://string-db.org/network/2342.SOPEG_0573Putrescine transporter subunit: membrane component of ABC superfamily; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
SOPEG_0579 protein networkhttps://string-db.org/network/2342.SOPEG_0579Uncharacterized protein.
AHF73136.1 protein networkhttps://string-db.org/network/2342.SOPEG_0580Putative bacteriophage protein; COG3299 Uncharacterized homolog of phage Mu protein gp47.
AHF73137.1 protein networkhttps://string-db.org/network/2342.SOPEG_0581Hypothetical protein.
AHF73138.1 protein networkhttps://string-db.org/network/2342.SOPEG_0582Hypothetical protein.
AHF73139.1 protein networkhttps://string-db.org/network/2342.SOPEG_0583COG0185 Ribosomal protein S19.
AHF73140.1 protein networkhttps://string-db.org/network/2342.SOPEG_0584Hypothetical protein.
AHF73142.1 protein networkhttps://string-db.org/network/2342.SOPEG_0589Hypothetical protein.
AHF73143.1 protein networkhttps://string-db.org/network/2342.SOPEG_0590Hypothetical protein.
AHF73144.1 protein networkhttps://string-db.org/network/2342.SOPEG_0591Hypothetical protein.
SOPEG_0594 protein networkhttps://string-db.org/network/2342.SOPEG_0594Uncharacterized protein.
SOPEG_0596 protein networkhttps://string-db.org/network/2342.SOPEG_0596Uncharacterized protein; Potential frameshift: common BLAST hit: gi|296103897|ref|YP_003614043.1| gp12; gp12.
AHF73147.1 protein networkhttps://string-db.org/network/2342.SOPEG_0597COG3566 Uncharacterized protein conserved in bacteria.
AHF73148.1 protein networkhttps://string-db.org/network/2342.SOPEG_0598Putative phage head morphogenesis protein; COG2369 Uncharacterized protein, homolog of phage Mu protein gp30.
AHF73149.1 protein networkhttps://string-db.org/network/2342.SOPEG_0599COG3567 Uncharacterized protein conserved in bacteria.
AHF73150.1 protein networkhttps://string-db.org/network/2342.SOPEG_0600Hypothetical protein; COG1783 Phage terminase large subunit.
AHF73151.1 protein networkhttps://string-db.org/network/2342.SOPEG_0601COG3728 Phage terminase, small subunit.
SOPEG_0604 protein networkhttps://string-db.org/network/2342.SOPEG_0604Phage 21-like group II holin; COG3772 Phage-related lysozyme (muraminidase); phage lysozyme lysis protein.
AHF73154.1 protein networkhttps://string-db.org/network/2342.SOPEG_0605Hypothetical protein.
AHF73155.1 protein networkhttps://string-db.org/network/2342.SOPEG_0606Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
AHF73156.1 protein networkhttps://string-db.org/network/2342.SOPEG_0608Hypothetical protein.
AHF73157.1 protein networkhttps://string-db.org/network/2342.SOPEG_0609COG3617 Prophage antirepressor.
AHF73158.1 protein networkhttps://string-db.org/network/2342.SOPEG_0610Phage transcriptional regulator.
dgkA protein networkhttps://string-db.org/network/2342.SOPEG_0616Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
arnT1 protein networkhttps://string-db.org/network/2342.SOPEG_0622Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. Th [...]
SOPEG_0624 protein networkhttps://string-db.org/network/2342.SOPEG_0624Cupin_2 domain-containing protein; Potential frameshift: common BLAST hit: gi|85058268|ref|YP_453970.1| putative glycosyltransferase; putative glycosyltransferase.
AHF73164.1 protein networkhttps://string-db.org/network/2342.SOPEG_0625COG2259 Predicted membrane protein.
AHF73165.1 protein networkhttps://string-db.org/network/2342.SOPEG_0626COG4420 Predicted membrane protein.
AHF73166.1 protein networkhttps://string-db.org/network/2342.SOPEG_0627COG4122 Predicted O-methyltransferase.
AHF73170.1 protein networkhttps://string-db.org/network/2342.SOPEG_0635Helper of transposition ISSoEn3, IS21 family.
AHF73171.1 protein networkhttps://string-db.org/network/2342.SOPEG_0636Transposase ISSoEn3, IS21 family.
AHF73172.1 protein networkhttps://string-db.org/network/2342.SOPEG_0637Dienelactone hydrolase-related enzyme; COG1073 Hydrolases of the alpha/beta superfamily.
ypeR protein networkhttps://string-db.org/network/2342.SOPEG_0641Quorum-sensing transcriptional activator YpeR; Target site duplication generated by insertion of ISSoEn1.
ypeI protein networkhttps://string-db.org/network/2342.SOPEG_0642N-acylhomoserine lactone synthase; COG3916 N-acyl-L-homoserine lactone synthetase.
exbD protein networkhttps://string-db.org/network/2342.SOPEG_0647Biopolymer transport protein ExbD; ISSoEn3, terminal inverted repeat.
exbB protein networkhttps://string-db.org/network/2342.SOPEG_0648COG0811 Biopolymer transport proteins.
plsC protein networkhttps://string-db.org/network/2342.SOPEG_06531-acyl-sn-glycerol-3-phosphate acyltransferase; Potential frameshift: common BLAST hit: gi|85058255|ref|YP_453957.1| repressor protein for FtsI; repressor protein for FtsI; Belongs to the 1-acyl- [...]
parC protein networkhttps://string-db.org/network/2342.SOPEG_0654DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circula [...]
ygiN protein networkhttps://string-db.org/network/2342.SOPEG_0655YgiN protein involved in menadione metabolism.
asnB protein networkhttps://string-db.org/network/2342.SOPEG_0668tRNA-Met; COG5464 Uncharacterized conserved protein; putative phage transposase.
nagC protein networkhttps://string-db.org/network/2342.SOPEG_0669N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family; COG1940 Transcriptional regulator/sugar kinase.
nagA protein networkhttps://string-db.org/network/2342.SOPEG_0670COG1820 N-acetylglucosamine-6-phosphate deacetylase.
nagB protein networkhttps://string-db.org/network/2342.SOPEG_0671Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
nagE protein networkhttps://string-db.org/network/2342.SOPEG_0672COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
glnS protein networkhttps://string-db.org/network/2342.SOPEG_0673COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
fur protein networkhttps://string-db.org/network/2342.SOPEG_0675COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
fldA protein networkhttps://string-db.org/network/2342.SOPEG_0676Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
ybfE protein networkhttps://string-db.org/network/2342.SOPEG_0677Uncharacterized protein ybfE.
seqA protein networkhttps://string-db.org/network/2342.SOPEG_0679Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs ex [...]
ybgA protein networkhttps://string-db.org/network/2342.SOPEG_0681YbgA; COG0033 Phosphoglucomutase; phosphoglucomutase.
phrB protein networkhttps://string-db.org/network/2342.SOPEG_0682COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
ybgI protein networkhttps://string-db.org/network/2342.SOPEG_0683Metal-binding protein.
ybgJ protein networkhttps://string-db.org/network/2342.SOPEG_0684COG2049 Allophanate hydrolase subunit 1.
ybgK protein networkhttps://string-db.org/network/2342.SOPEG_0685COG1984 Allophanate hydrolase subunit 2.
gltA protein networkhttps://string-db.org/network/2342.SOPEG_0686COG0372 Citrate synthase; Belongs to the citrate synthase family.
sdhC protein networkhttps://string-db.org/network/2342.SOPEG_0687COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
sdhD protein networkhttps://string-db.org/network/2342.SOPEG_0688Succinate dehydrogenase cytochrome b556 small membrane subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
sdhA protein networkhttps://string-db.org/network/2342.SOPEG_0689COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
sdhB protein networkhttps://string-db.org/network/2342.SOPEG_0690COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
sucA protein networkhttps://string-db.org/network/2342.SOPEG_0691COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
sucB protein networkhttps://string-db.org/network/2342.SOPEG_0692Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the [...]
sucC protein networkhttps://string-db.org/network/2342.SOPEG_0693Succinyl-CoA synthetase [ADP-forming] beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP a [...]
sucD protein networkhttps://string-db.org/network/2342.SOPEG_0694Succinyl-CoA synthetase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP [...]
cydA protein networkhttps://string-db.org/network/2342.SOPEG_0696Cytochrome d ubiquinol oxidase subunit I; ISSoEn2, terminal inverted repeat.
cydB protein networkhttps://string-db.org/network/2342.SOPEG_0697COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
ybgT protein networkhttps://string-db.org/network/2342.SOPEG_0698ybgT; COG4890 Predicted outer membrane lipoprotein.
ybgE protein networkhttps://string-db.org/network/2342.SOPEG_0699ybgE; COG3790 Predicted membrane protein.
tolQ protein networkhttps://string-db.org/network/2342.SOPEG_0701Tol-Pal system protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required [...]
tolR protein networkhttps://string-db.org/network/2342.SOPEG_0702Tol biopolymer transport system TolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane in [...]
tolA protein networkhttps://string-db.org/network/2342.SOPEG_0703Cell envelope integrity inner membrane protein TolA; COG3064 Membrane protein involved in colicin uptake.
tolB protein networkhttps://string-db.org/network/2342.SOPEG_0704Tol-Pal system protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occ [...]
pal protein networkhttps://string-db.org/network/2342.SOPEG_0705Peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer memb [...]
ybgF protein networkhttps://string-db.org/network/2342.SOPEG_0706Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
nadA protein networkhttps://string-db.org/network/2342.SOPEG_0708Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.
AHF73223.1 protein networkhttps://string-db.org/network/2342.SOPEG_0720Hypothetical protein.
yjdC1 protein networkhttps://string-db.org/network/2342.SOPEG_0725tRNA-Phe; COG0582 Integrase; phage integrase.
dipZ1 protein networkhttps://string-db.org/network/2342.SOPEG_0726Cytochrome c-type biogenesis protein DsbD protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the per [...]
fxsA1 protein networkhttps://string-db.org/network/2342.SOPEG_0730COG3030 Protein affecting phage T7 exclusion by the F plasmid.
groES1 protein networkhttps://string-db.org/network/2342.SOPEG_0731Heat shock protein 60 family co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groEL1 protein networkhttps://string-db.org/network/2342.SOPEG_0732Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
yjeI1 protein networkhttps://string-db.org/network/2342.SOPEG_0733Putative membrane protein yjeI.
yjeK1 protein networkhttps://string-db.org/network/2342.SOPEG_0734COG1509 Lysine 2,3-aminomutase.
efp1 protein networkhttps://string-db.org/network/2342.SOPEG_0735Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, [...]
aroF protein networkhttps://string-db.org/network/2342.SOPEG_07472-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- [...]
tyrA protein networkhttps://string-db.org/network/2342.SOPEG_0748Bifunctional chorismate mutase/prephenate dehydrogenase; COG1605 Chorismate mutase.
pheA protein networkhttps://string-db.org/network/2342.SOPEG_0749Bifunctional chorismate mutase/prephenate dehydratase; COG1605 Chorismate mutase.
raiA protein networkhttps://string-db.org/network/2342.SOPEG_0750Putative sigma-54 modulation protein; COG1544 Ribosome-associated protein Y (PSrp-1).
bamD protein networkhttps://string-db.org/network/2342.SOPEG_0751Outer membrane biogenesis protein BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitut [...]
rluD protein networkhttps://string-db.org/network/2342.SOPEG_0752Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
yfiH protein networkhttps://string-db.org/network/2342.SOPEG_0753yfiH; Belongs to the multicopper oxidase YfiH/RL5 family.
clpB protein networkhttps://string-db.org/network/2342.SOPEG_0754Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Be [...]
SOPEG_0759 protein networkhttps://string-db.org/network/2342.SOPEG_0759Chain A Carbapenam Synthetase.
mltD protein networkhttps://string-db.org/network/2342.SOPEG_0761Membrane-bound lytic murein transglycosylase D; COG3021 Uncharacterized protein conserved in bacteria; hypothetical protein.
gloB protein networkhttps://string-db.org/network/2342.SOPEG_0762Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
yafS protein networkhttps://string-db.org/network/2342.SOPEG_0763COG0500 SAM-dependent methyltransferases.
rnhA protein networkhttps://string-db.org/network/2342.SOPEG_0764Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
dnaQ protein networkhttps://string-db.org/network/2342.SOPEG_0765DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing funct [...]
gmhA protein networkhttps://string-db.org/network/2342.SOPEG_0774Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
SOPEG_0783 protein networkhttps://string-db.org/network/2342.SOPEG_0783Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73256.1 protein networkhttps://string-db.org/network/2342.SOPEG_0784Helper of transposition ISSoEn3, IS21 family.
AHF73257.1 protein networkhttps://string-db.org/network/2342.SOPEG_0785D-lyxose isomerase.
proA protein networkhttps://string-db.org/network/2342.SOPEG_0796tRNA-Thr; Required for the transposition of the insertion element.
SOPEG_0800 protein networkhttps://string-db.org/network/2342.SOPEG_0800Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF73260.1 protein networkhttps://string-db.org/network/2342.SOPEG_0801Hypothetical protein.
SOPEG_0805 protein networkhttps://string-db.org/network/2342.SOPEG_0805ISSoEn2, terminal inverted repeat.
crl protein networkhttps://string-db.org/network/2342.SOPEG_0807Sigma factor-binding protein Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to [...]
gpt protein networkhttps://string-db.org/network/2342.SOPEG_0809Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
pepD protein networkhttps://string-db.org/network/2342.SOPEG_0810Aminoacyl-histidine dipeptidase (Peptidase D); COG2195 Di- and tripeptidases.
dinB protein networkhttps://string-db.org/network/2342.SOPEG_0811DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misa [...]
queH protein networkhttps://string-db.org/network/2342.SOPEG_0816Epoxyqueuosine reductase QueH; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and [...]
aroL1 protein networkhttps://string-db.org/network/2342.SOPEG_0820Shikimate kinase 2; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
yaiA1 protein networkhttps://string-db.org/network/2342.SOPEG_0821yaiA1.
rdgC1 protein networkhttps://string-db.org/network/2342.SOPEG_0824Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.
phoR protein networkhttps://string-db.org/network/2342.SOPEG_0833Phosphate regulon sensor protein PhoR (SphS); COG0642 Signal transduction histidine kinase.
pstS protein networkhttps://string-db.org/network/2342.SOPEG_0835Methionine synthase II (Cobalamin-independent); COG0226 ABC-type phosphate transport system, periplasmic component; Phosphate ABC transporter periplasmic phosphate-binding protein PstS.
brnQ protein networkhttps://string-db.org/network/2342.SOPEG_0836Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
ahpC protein networkhttps://string-db.org/network/2342.SOPEG_0838Alkyl hydroperoxide reductase subunit C-like protein; COG1113 Gamma-aminobutyrate permease and related permeases; putative proline-specific permease.
SOPEG_0852 protein networkhttps://string-db.org/network/2342.SOPEG_0852GCN5-related N-acetyltransferase; COG1309 Transcriptional regulator; putative transcriptional regulator.
qacE protein networkhttps://string-db.org/network/2342.SOPEG_0855Ethidium bromide-methyl viologen resistance protein EmrE; COG0583 Transcriptional regulator; transcriptional regulator.
speG protein networkhttps://string-db.org/network/2342.SOPEG_0856Spermidine N1-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
tsx protein networkhttps://string-db.org/network/2342.SOPEG_0857Nucleoside-specific channel-forming protein Tsx; COG3248 Nucleoside-binding outer membrane protein.
AHF73287.1 protein networkhttps://string-db.org/network/2342.SOPEG_0862Helper of transposition ISSoEn3, IS21 family.
AHF73288.1 protein networkhttps://string-db.org/network/2342.SOPEG_0863Transposase ISSoEn3, IS21 family.
pyrE protein networkhttps://string-db.org/network/2342.SOPEG_0866Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
slmA protein networkhttps://string-db.org/network/2342.SOPEG_0867Division inhibitor protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor [...]
dut protein networkhttps://string-db.org/network/2342.SOPEG_0868Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intrace [...]
dfp protein networkhttps://string-db.org/network/2342.SOPEG_0869Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphop [...]
rpmB protein networkhttps://string-db.org/network/2342.SOPEG_087150S ribosomal protein L28; COG2003 DNA repair proteins; DNA repair protein RadC; Belongs to the bacterial ribosomal protein bL28 family.
rpmG protein networkhttps://string-db.org/network/2342.SOPEG_0872Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
mutM protein networkhttps://string-db.org/network/2342.SOPEG_0873Formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recogn [...]
coaD protein networkhttps://string-db.org/network/2342.SOPEG_0874Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...]
kdtX protein networkhttps://string-db.org/network/2342.SOPEG_0875Lipopolysaccharide core biosynthesis glycosyl transferase kdtX; COG0463 Glycosyltransferases involved in cell wall biogenesis.
waaG protein networkhttps://string-db.org/network/2342.SOPEG_0877UDP-glucose:(Heptosyl) LPS alpha1-3-glucosyltransferase WaaG; COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase.
waaQ protein networkhttps://string-db.org/network/2342.SOPEG_0879Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73300.1 protein networkhttps://string-db.org/network/2342.SOPEG_0880Helper of transposition ISSoEn3, IS21 family.
yibD protein networkhttps://string-db.org/network/2342.SOPEG_0881COG0463 Glycosyltransferases involved in cell wall biogenesis.
waaB protein networkhttps://string-db.org/network/2342.SOPEG_0882Putative lipopolysaccharide glycosyltransferase; COG0438 Glycosyltransferase.
rfaL protein networkhttps://string-db.org/network/2342.SOPEG_0884Putative lipid A core:surface polymer ligase; Potential frameshift: common BLAST hit: gi|296100505|ref|YP_003610651.1| lipopolysaccharide biosynthesis protein WalW; lipopolysaccharide biosynthesi [...]
rfaZ protein networkhttps://string-db.org/network/2342.SOPEG_0885Lipopolysaccharide core biosynthesis protein RfaZ.
waaC protein networkhttps://string-db.org/network/2342.SOPEG_0887ADP-heptose:LPS heptosyl transferase I.
waaF protein networkhttps://string-db.org/network/2342.SOPEG_0888COG0859 ADP-heptose:LPS heptosyltransferase.
rfaD protein networkhttps://string-db.org/network/2342.SOPEG_0889ADP-L-glycero-D-mannoheptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the [...]
lpsE protein networkhttps://string-db.org/network/2342.SOPEG_0891Glycosyl transferase, group 1.
envC protein networkhttps://string-db.org/network/2342.SOPEG_0893Cell wall endopeptidase family M23/M37; COG2861 Uncharacterized protein conserved in bacteria; hypothetical protein.
yibN protein networkhttps://string-db.org/network/2342.SOPEG_0894COG0607 Rhodanese-related sulfurtransferase.
grxC protein networkhttps://string-db.org/network/2342.SOPEG_0895Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
secB protein networkhttps://string-db.org/network/2342.SOPEG_0896Protein export cytoplasm chaperone protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of [...]
gpsA protein networkhttps://string-db.org/network/2342.SOPEG_0897COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
cysE protein networkhttps://string-db.org/network/2342.SOPEG_0898COG1045 Serine acetyltransferase.
trmL protein networkhttps://string-db.org/network/2342.SOPEG_0899tRNA (cytosine34-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl [...]
cpxA protein networkhttps://string-db.org/network/2342.SOPEG_0900Copper sensory histidine kinase CpxA; COG0642 Signal transduction histidine kinase.
cpxR protein networkhttps://string-db.org/network/2342.SOPEG_0901Copper-sensing two-component system response regulator CpxR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
cpxP protein networkhttps://string-db.org/network/2342.SOPEG_0902COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein.
AHF73319.1 protein networkhttps://string-db.org/network/2342.SOPEG_0903Nudix hydrolase family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
AHF73320.1 protein networkhttps://string-db.org/network/2342.SOPEG_0904Lysine decarboxylase family; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
psiE protein networkhttps://string-db.org/network/2342.SOPEG_0908Phosphate-starvation-inducible protein PsiE; COG2513 PEP phosphonomutase and related enzymes; phosphoenolpyruvate phosphomutase; Belongs to the PsiE family.
pfkA protein networkhttps://string-db.org/network/2342.SOPEG_09096-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
sbp protein networkhttps://string-db.org/network/2342.SOPEG_0910Sulfate-binding protein Sbp; COG1613 ABC-type sulfate transport system, periplasmic component.
tpiA protein networkhttps://string-db.org/network/2342.SOPEG_0911Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
yiiQ protein networkhttps://string-db.org/network/2342.SOPEG_0912Putative exported protein precursor.
fpr protein networkhttps://string-db.org/network/2342.SOPEG_0913COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
emrD protein networkhttps://string-db.org/network/2342.SOPEG_0914Multidrug resistance protein D; COG0477 Permeases of the major facilitator superfamily.
zapB protein networkhttps://string-db.org/network/2342.SOPEG_0918Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimu [...]
hslU protein networkhttps://string-db.org/network/2342.SOPEG_0921ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU [...]
hslV protein networkhttps://string-db.org/network/2342.SOPEG_0922ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
ftsN protein networkhttps://string-db.org/network/2342.SOPEG_0923Cell division protein FtsN; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with Ft [...]
priA protein networkhttps://string-db.org/network/2342.SOPEG_0925Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
rpmE1 protein networkhttps://string-db.org/network/2342.SOPEG_0926LSU ribosomal protein L31p; Binds the 23S rRNA.
SOPEG_0929 protein networkhttps://string-db.org/network/2342.SOPEG_0929Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73336.1 protein networkhttps://string-db.org/network/2342.SOPEG_0930Transposase ISSoEn3, IS21 family.
hpt protein networkhttps://string-db.org/network/2342.SOPEG_0940Hypoxanthine phosphoribosyltransferase; Potential frameshift: common BLAST hit: gi|90423981|ref|YP_532351.1| glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase; Belo [...]
panD protein networkhttps://string-db.org/network/2342.SOPEG_0946Aspartate 1-decarboxylase alpha chain; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
panC protein networkhttps://string-db.org/network/2342.SOPEG_0947Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase f [...]
panB protein networkhttps://string-db.org/network/2342.SOPEG_09483-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to [...]
folK protein networkhttps://string-db.org/network/2342.SOPEG_09502-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Target site duplication generated by insertion of ISSoEn1.
pcnB protein networkhttps://string-db.org/network/2342.SOPEG_0951poly(A) polymerase I; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influenc [...]
yadB protein networkhttps://string-db.org/network/2342.SOPEG_0952glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on t [...]
dksA protein networkhttps://string-db.org/network/2342.SOPEG_0953RNA polymerase-binding transcription factor; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regu [...]
sfsA protein networkhttps://string-db.org/network/2342.SOPEG_0954Sugar/maltose fermentation stimulation protein-like protein; COG1489 DNA-binding protein, stimulates sugar fermentation; Belongs to the SfsA family.
mrcB protein networkhttps://string-db.org/network/2342.SOPEG_0957Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domai [...]
AHF73349.1 protein networkhttps://string-db.org/network/2342.SOPEG_0958COG1309 Transcriptional regulator.
AHF73350.1 protein networkhttps://string-db.org/network/2342.SOPEG_0959Putative MaoC-like protein; COG2030 Acyl dehydratase.
SOPEG_0967 protein networkhttps://string-db.org/network/2342.SOPEG_0967Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
caiD protein networkhttps://string-db.org/network/2342.SOPEG_0968COG1024 Enoyl-CoA hydratase/carnithine racemase.
SOPEG_0970 protein networkhttps://string-db.org/network/2342.SOPEG_0970Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73355.1 protein networkhttps://string-db.org/network/2342.SOPEG_0971Helper of transposition ISSoEn3, IS21 family.
fhuC protein networkhttps://string-db.org/network/2342.SOPEG_0983Ferric hydroxamate ABC transporter ATP-binding protein FhuC; ISSoEn2, terminal inverted repeat.
hemL protein networkhttps://string-db.org/network/2342.SOPEG_0986Glutamate-1-semialdehyde 2,1-aminomutase; Potential frameshift: common BLAST hit: gi|294505096|ref|YP_003569158.1| ferrichrome transport system permease protein FhuB; ferrichrome transport system [...]
erpA protein networkhttps://string-db.org/network/2342.SOPEG_0990Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.
dgt protein networkhttps://string-db.org/network/2342.SOPEG_0994Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs; Belongs to the dGTPase family. Type 1 subfamily.
degP protein networkhttps://string-db.org/network/2342.SOPEG_0995HtrA protease/chaperone protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
garD protein networkhttps://string-db.org/network/2342.SOPEG_1002Galactarate dehydratase (L-threo-forming); Catalyzes the dehydration of galactarate to form 5-dehydro-4- deoxy-D-glucarate.
garP protein networkhttps://string-db.org/network/2342.SOPEG_1003COG0477 Permeases of the major facilitator superfamily.
garR protein networkhttps://string-db.org/network/2342.SOPEG_10052-hydroxy-3-oxopropionate reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily.
barA protein networkhttps://string-db.org/network/2342.SOPEG_1007Histidine kinase; Potential frameshift: common BLAST hit: gi|261822788|ref|YP_003260894.1| glycerate kinase; glycerate kinase.
relA protein networkhttps://string-db.org/network/2342.SOPEG_1009GTP pyrophosphokinase (P)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activiti [...]
mazG protein networkhttps://string-db.org/network/2342.SOPEG_1010Nucleoside triphosphate pyrophosphohydrolase MazG; COG1694 Predicted pyrophosphatase.
pyrG protein networkhttps://string-db.org/network/2342.SOPEG_1011CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the [...]
eno protein networkhttps://string-db.org/network/2342.SOPEG_1012Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
ygcF protein networkhttps://string-db.org/network/2342.SOPEG_1013Queuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step com [...]
cysJ protein networkhttps://string-db.org/network/2342.SOPEG_1015Sulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities [...]
cysI protein networkhttps://string-db.org/network/2342.SOPEG_1016Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities r [...]
cysH protein networkhttps://string-db.org/network/2342.SOPEG_1017Phosphoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
iap protein networkhttps://string-db.org/network/2342.SOPEG_1018Alkaline phosphatase isozyme conversion protein precursor; COG2234 Predicted aminopeptidases.
cysG protein networkhttps://string-db.org/network/2342.SOPEG_1019Uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. [...]
cysD protein networkhttps://string-db.org/network/2342.SOPEG_1020Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes.
cysN protein networkhttps://string-db.org/network/2342.SOPEG_1021Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase [...]
cysC protein networkhttps://string-db.org/network/2342.SOPEG_1022Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
ygbE protein networkhttps://string-db.org/network/2342.SOPEG_1023Putative membrane protein.
ftsB protein networkhttps://string-db.org/network/2342.SOPEG_1024Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins [...]
ispD protein networkhttps://string-db.org/network/2342.SOPEG_10252-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to [...]
ispF protein networkhttps://string-db.org/network/2342.SOPEG_10262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
surE protein networkhttps://string-db.org/network/2342.SOPEG_10285'/3'-nucleotidase SurE; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates wit [...]
pcm protein networkhttps://string-db.org/network/2342.SOPEG_1029protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl [...]
nlpD protein networkhttps://string-db.org/network/2342.SOPEG_1030Lipoprotein NlpD; COG0739 Membrane proteins related to metalloendopeptidases.
rpoS protein networkhttps://string-db.org/network/2342.SOPEG_1031RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the m [...]
mutS protein networkhttps://string-db.org/network/2342.SOPEG_1032DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
SOPEG_1036 protein networkhttps://string-db.org/network/2342.SOPEG_1036Mutator family transposase; Required for the transposition of the insertion element.
AHF73395.1 protein networkhttps://string-db.org/network/2342.SOPEG_1037Phage transcriptional regulator.
rusA protein networkhttps://string-db.org/network/2342.SOPEG_1038Crossover junction endodeoxyribonuclease RusA; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and struct [...]
AHF73397.1 protein networkhttps://string-db.org/network/2342.SOPEG_1039Transposase ISSoEn2, IS256 family.
AHF73398.1 protein networkhttps://string-db.org/network/2342.SOPEG_1040Hypothetical protein.
AHF73399.1 protein networkhttps://string-db.org/network/2342.SOPEG_1041Hypothetical protein.
AHF73400.1 protein networkhttps://string-db.org/network/2342.SOPEG_1042Hypothetical protein.
AHF73401.1 protein networkhttps://string-db.org/network/2342.SOPEG_1043Hypothetical protein.
AHF73402.1 protein networkhttps://string-db.org/network/2342.SOPEG_1044Hypothetical protein.
mltB protein networkhttps://string-db.org/network/2342.SOPEG_1054ISSoEn2, terminal inverted repeat.
AHF73406.1 protein networkhttps://string-db.org/network/2342.SOPEG_1055Cystine-binding periplasmic protein precursor; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 f [...]
ygaD protein networkhttps://string-db.org/network/2342.SOPEG_1056Protein Implicated in DNA repair function with RecA and MutS; COG1546 Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
recA protein networkhttps://string-db.org/network/2342.SOPEG_1058Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
alaS protein networkhttps://string-db.org/network/2342.SOPEG_1060Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA( [...]
csrA protein networkhttps://string-db.org/network/2342.SOPEG_1061Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid g [...]
yqaB protein networkhttps://string-db.org/network/2342.SOPEG_1065Fructose-1-P/6-phosphogluconate phosphatase; Target site duplication generated by insertion of ISSoEn2.
gshA protein networkhttps://string-db.org/network/2342.SOPEG_1066Glutamate--cysteine ligase; COG2918 Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
ypjD protein networkhttps://string-db.org/network/2342.SOPEG_1069Putative membrane protein; COG4536 Putative Mg2+ and Co2+ transporter CorB; hypothetical protein.
ffh protein networkhttps://string-db.org/network/2342.SOPEG_1070Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
rpsP protein networkhttps://string-db.org/network/2342.SOPEG_1071COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
rimM protein networkhttps://string-db.org/network/2342.SOPEG_107216S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
trmD protein networkhttps://string-db.org/network/2342.SOPEG_1073tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rplS protein networkhttps://string-db.org/network/2342.SOPEG_1074LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
yjdC2 protein networkhttps://string-db.org/network/2342.SOPEG_1079tRNA-Phe; COG0582 Integrase; phage integrase.
dipZ2 protein networkhttps://string-db.org/network/2342.SOPEG_1080Cytochrome c-type biogenesis protein DsbD / protein-disulfide reductase; COG4232 Thiol:disulfide interchange protein.
cutA2 protein networkhttps://string-db.org/network/2342.SOPEG_1081Divalent-cation tolerance protein CutA; Involved in resistance toward heavy metals. Belongs to the CutA family.
fxsA2 protein networkhttps://string-db.org/network/2342.SOPEG_1084COG3030 Protein affecting phage T7 exclusion by the F plasmid.
groES2 protein networkhttps://string-db.org/network/2342.SOPEG_1085Heat shock protein 60 family co-chaperone GroES; COG0234 Co-chaperonin GroES (HSP10).
groEL2 protein networkhttps://string-db.org/network/2342.SOPEG_1086Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
yjeI2 protein networkhttps://string-db.org/network/2342.SOPEG_1087Putative membrane protein yjeI.
yjeK2 protein networkhttps://string-db.org/network/2342.SOPEG_1088COG1509 Lysine 2,3-aminomutase.
efp2 protein networkhttps://string-db.org/network/2342.SOPEG_1089COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A).
orn protein networkhttps://string-db.org/network/2342.SOPEG_11013'-to-5' oligoribonuclease (orn); 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.
rsgA protein networkhttps://string-db.org/network/2342.SOPEG_1102Ribosome small subunit-stimulated GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature [...]
psd protein networkhttps://string-db.org/network/2342.SOPEG_1103Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
yjeP protein networkhttps://string-db.org/network/2342.SOPEG_1104Potassium efflux system KefA protein / Small-conductance mechanosensitive channel; COG3264 Small-conductance mechanosensitive channel.
yjeA protein networkhttps://string-db.org/network/2342.SOPEG_1105Lysyl-tRNA synthetase-related protein; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-depen [...]
ecnB protein networkhttps://string-db.org/network/2342.SOPEG_1107COG3040 Bacterial lipocalin; Outer membrane lipoprotein blc precursor.
ecnA protein networkhttps://string-db.org/network/2342.SOPEG_1109Mutator family transposase; Required for the transposition of the insertion element.
qor1 protein networkhttps://string-db.org/network/2342.SOPEG_1110Quinone oxidoreductase, NADPH-dependent; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
SOPEG_1113 protein networkhttps://string-db.org/network/2342.SOPEG_1113Putative transcriptional regulator, PAS and GerE domains; Target site duplication generated by insertion of ISSoEn1.
SOPEG_1115 protein networkhttps://string-db.org/network/2342.SOPEG_1115Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF73443.1 protein networkhttps://string-db.org/network/2342.SOPEG_1116Transposase ISSoEn1, IS5 ssgr IS903 family.
AHF73444.1 protein networkhttps://string-db.org/network/2342.SOPEG_1117Transcriptional regulator AraC family; COG2207 AraC-type DNA-binding domain-containing proteins.
ytfF protein networkhttps://string-db.org/network/2342.SOPEG_1118Putative transmembrane subunit; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
SOPEG_1120 protein networkhttps://string-db.org/network/2342.SOPEG_1120HTH cro/C1-type domain-containing protein.
AHF73447.1 protein networkhttps://string-db.org/network/2342.SOPEG_1121COG0728 Uncharacterized membrane protein, putative virulence factor.
AHF73448.1 protein networkhttps://string-db.org/network/2342.SOPEG_1122Hypothetical protein.
amiD1 protein networkhttps://string-db.org/network/2342.SOPEG_1125N-acetylmuramoyl-L-alanine amidase; Putative nematicidal YD repeat-containing toxin protein.
AHF73450.1 protein networkhttps://string-db.org/network/2342.SOPEG_1126Hypothetical protein.
AHF73451.1 protein networkhttps://string-db.org/network/2342.SOPEG_1127Putative lipoprotein.
AHF73452.1 protein networkhttps://string-db.org/network/2342.SOPEG_1128Transposase ISSoEn3, IS21 family.
AHF73453.1 protein networkhttps://string-db.org/network/2342.SOPEG_1129Helper of transposition ISSoEn3, IS21 family.
lpxP protein networkhttps://string-db.org/network/2342.SOPEG_1130Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of palmitoleate from palmitoleoyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (palmitoleoyl)-lipid IV(A); [...]
cspE protein networkhttps://string-db.org/network/2342.SOPEG_1132Cold shock protein CspE; COG3137 Putative salt-induced outer membrane protein; Putative exported protein.
crcB protein networkhttps://string-db.org/network/2342.SOPEG_1133Chromosome condensation membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
tatE protein networkhttps://string-db.org/network/2342.SOPEG_1134Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
lipA protein networkhttps://string-db.org/network/2342.SOPEG_1135Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, ther [...]
lipB protein networkhttps://string-db.org/network/2342.SOPEG_1136Octanoate-[acyl-carrier-protein]-protein-N- octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoat [...]
ybeD protein networkhttps://string-db.org/network/2342.SOPEG_1137Putative lipoate regulatory protein YbeD; Belongs to the UPF0250 family.
dacA protein networkhttps://string-db.org/network/2342.SOPEG_1138COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
mrdB protein networkhttps://string-db.org/network/2342.SOPEG_1140Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
mrdA protein networkhttps://string-db.org/network/2342.SOPEG_1141Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
rlmH protein networkhttps://string-db.org/network/2342.SOPEG_1142LSU m3Psi1915 methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
nadD protein networkhttps://string-db.org/network/2342.SOPEG_1144Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
holA protein networkhttps://string-db.org/network/2342.SOPEG_1145COG1466 DNA polymerase III, delta subunit.
lptE protein networkhttps://string-db.org/network/2342.SOPEG_1146LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B); Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the pr [...]
leuS protein networkhttps://string-db.org/network/2342.SOPEG_1147COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
ybeL protein networkhttps://string-db.org/network/2342.SOPEG_1148ybeL; COG1592 Rubrerythrin.
gltL protein networkhttps://string-db.org/network/2342.SOPEG_1149Glutamate Aspartate transport ATP-binding protein GltL; COG1126 ABC-type polar amino acid transport system, ATPase component.
gltK protein networkhttps://string-db.org/network/2342.SOPEG_1150Glutamate Aspartate transport system permease protein GltK; COG0765 ABC-type amino acid transport system, permease component.
gltJ protein networkhttps://string-db.org/network/2342.SOPEG_1151Glutamate Aspartate transport system permease protein GltJ; COG0765 ABC-type amino acid transport system, permease component.
gltI protein networkhttps://string-db.org/network/2342.SOPEG_1152Glutamate Aspartate periplasmic binding protein precursor GltI; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
AHF73474.1 protein networkhttps://string-db.org/network/2342.SOPEG_1153D12 class N6 adenine-specific DNA methyltransferase; COG0338 Site-specific DNA methylase.
SOPEG_1155 protein networkhttps://string-db.org/network/2342.SOPEG_1155Transposase ISSoEn3, IS21 family.
AHF73476.1 protein networkhttps://string-db.org/network/2342.SOPEG_1156Transposase ISSoEn2, IS256 family.
mtnD protein networkhttps://string-db.org/network/2342.SOPEG_1158Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active s [...]
parE protein networkhttps://string-db.org/network/2342.SOPEG_1161DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular [...]
yqiA protein networkhttps://string-db.org/network/2342.SOPEG_1162COG3150 Predicted esterase.
cpdA protein networkhttps://string-db.org/network/2342.SOPEG_11633'5'-cyclic-nucleotide phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent p [...]
yqiB protein networkhttps://string-db.org/network/2342.SOPEG_1164Putative cytoplasmic protein; COG3151 Uncharacterized protein conserved in bacteria.
nudF protein networkhttps://string-db.org/network/2342.SOPEG_1165ADP-ribose pyrophosphatase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
tolC protein networkhttps://string-db.org/network/2342.SOPEG_1166COG1538 Outer membrane protein.
ygiB protein networkhttps://string-db.org/network/2342.SOPEG_1167Putative lipoprotein; COG5463 Predicted integral membrane protein.
ygiC protein networkhttps://string-db.org/network/2342.SOPEG_1168Glutathionylspermidine synthase group 1-like protein; COG0754 Glutathionylspermidine synthase.
ribB protein networkhttps://string-db.org/network/2342.SOPEG_11713,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
yqiC protein networkhttps://string-db.org/network/2342.SOPEG_1172yqiC; COG2960 Uncharacterized protein conserved in bacteria.
rfaE protein networkhttps://string-db.org/network/2342.SOPEG_1173ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-h [...]
ygiM protein networkhttps://string-db.org/network/2342.SOPEG_1176Putative signal transduction protein (SH3 domain); COG3025 Uncharacterized conserved protein; adenylate cyclase.
cca protein networkhttps://string-db.org/network/2342.SOPEG_1177tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order [...]
folB protein networkhttps://string-db.org/network/2342.SOPEG_1180Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
ygiH protein networkhttps://string-db.org/network/2342.SOPEG_1181Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (L [...]
gcp protein networkhttps://string-db.org/network/2342.SOPEG_1182YgjD/Kae1/Qri7 family required for threonylcarbamoyladenosine (t(6)A) formation in tRNA; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs tha [...]
rpsU protein networkhttps://string-db.org/network/2342.SOPEG_1183COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
dnaG protein networkhttps://string-db.org/network/2342.SOPEG_1184DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
rpoD protein networkhttps://string-db.org/network/2342.SOPEG_1185RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the p [...]
AHF73499.1 protein networkhttps://string-db.org/network/2342.SOPEG_1189Hypothetical protein.
AHF73500.1 protein networkhttps://string-db.org/network/2342.SOPEG_1190Hypothetical protein.
AHF73501.1 protein networkhttps://string-db.org/network/2342.SOPEG_1191Transposase ISSoEn1, IS5 ssgr IS903 family.
bopA protein networkhttps://string-db.org/network/2342.SOPEG_1193Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
nahR protein networkhttps://string-db.org/network/2342.SOPEG_1198Transcriptional regulatory protein; COG1089 GDP-D-mannose dehydratase; putative GDP-mannose dehydratase; Belongs to the LysR transcriptional regulatory family.
AHF73504.1 protein networkhttps://string-db.org/network/2342.SOPEG_1199Hypothetical protein.
AHF73505.1 protein networkhttps://string-db.org/network/2342.SOPEG_1200Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
yjeF protein networkhttps://string-db.org/network/2342.SOPEG_1204ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense [...]
yjeE protein networkhttps://string-db.org/network/2342.SOPEG_1205ATPase YjeE predicted to have essential role in cell wall biosynthesis; COG0802 Predicted ATPase or kinase.
amiB protein networkhttps://string-db.org/network/2342.SOPEG_1206COG0860 N-acetylmuramoyl-L-alanine amidase.
mutL protein networkhttps://string-db.org/network/2342.SOPEG_1207DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker' [...]
miaA protein networkhttps://string-db.org/network/2342.SOPEG_1208tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
hfq protein networkhttps://string-db.org/network/2342.SOPEG_1209RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and chang [...]
hflK protein networkhttps://string-db.org/network/2342.SOPEG_1211Protein HflK; HflC and HflK could encode or regulate a protease.
hflC protein networkhttps://string-db.org/network/2342.SOPEG_1212FtsH protease regulator HflC; HflC and HflK could regulate a protease.
yjeT protein networkhttps://string-db.org/network/2342.SOPEG_1216Putative inner membrane protein YjeT (Clustered with HflC); ISSoEn2, terminal inverted repeat.
purA protein networkhttps://string-db.org/network/2342.SOPEG_1217Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
rnr protein networkhttps://string-db.org/network/2342.SOPEG_12183'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase [...]
rlmB protein networkhttps://string-db.org/network/2342.SOPEG_121923S rRNA (guanosine-2'-O-)-methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methylt [...]
yjfP protein networkhttps://string-db.org/network/2342.SOPEG_1221Esterase; Putative biofilm stress and motility protein A.
rpsF protein networkhttps://string-db.org/network/2342.SOPEG_1222SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.
priB protein networkhttps://string-db.org/network/2342.SOPEG_1223Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
rpsR protein networkhttps://string-db.org/network/2342.SOPEG_1224SSU ribosomal protein S18p; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial riboso [...]
rplI protein networkhttps://string-db.org/network/2342.SOPEG_1225LSU ribosomal protein L9p; Binds to the 23S rRNA.
ytfB protein networkhttps://string-db.org/network/2342.SOPEG_1228COG3061 Cell envelope opacity-associated protein A.
fklB protein networkhttps://string-db.org/network/2342.SOPEG_1229COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
cysQ protein networkhttps://string-db.org/network/2342.SOPEG_1230Adenosine-3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
ytfJ protein networkhttps://string-db.org/network/2342.SOPEG_1231ytfJ; COG3054 Predicted transcriptional regulator.
ytfK protein networkhttps://string-db.org/network/2342.SOPEG_1232ytfK.
msrA protein networkhttps://string-db.org/network/2342.SOPEG_1234Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of met [...]
ytfM protein networkhttps://string-db.org/network/2342.SOPEG_1235Uncharacterized protein YtfM precursor; COG0729 Outer membrane protein.
ytfN protein networkhttps://string-db.org/network/2342.SOPEG_1236COG2911 Uncharacterized protein conserved in bacteria.
ytfP protein networkhttps://string-db.org/network/2342.SOPEG_1237ytfP.
ppa protein networkhttps://string-db.org/network/2342.SOPEG_1238Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
mpl protein networkhttps://string-db.org/network/2342.SOPEG_1240UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetyl [...]
argR protein networkhttps://string-db.org/network/2342.SOPEG_1242Arginine pathway regulatory protein ArgR repressor of arg regulon; Regulates arginine biosynthesis genes.
sfsB protein networkhttps://string-db.org/network/2342.SOPEG_1245Putative regulator for maltose metabolism; COG3423 Predicted transcriptional regulator.
AHF73540.1 protein networkhttps://string-db.org/network/2342.SOPEG_1246MuA-transposase/repressor protein CI DNA-binding protein.
ispB protein networkhttps://string-db.org/network/2342.SOPEG_1247COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
rplU protein networkhttps://string-db.org/network/2342.SOPEG_1248LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
rpmA protein networkhttps://string-db.org/network/2342.SOPEG_1249COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
obgE protein networkhttps://string-db.org/network/2342.SOPEG_1251GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in contro [...]
greA2 protein networkhttps://string-db.org/network/2342.SOPEG_1254Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
rlmE protein networkhttps://string-db.org/network/2342.SOPEG_1256Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
ftsH protein networkhttps://string-db.org/network/2342.SOPEG_1257Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins [...]
folP protein networkhttps://string-db.org/network/2342.SOPEG_1258Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
glmM protein networkhttps://string-db.org/network/2342.SOPEG_1259Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
secG protein networkhttps://string-db.org/network/2342.SOPEG_1260Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
rimP protein networkhttps://string-db.org/network/2342.SOPEG_1263Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
nusA protein networkhttps://string-db.org/network/2342.SOPEG_1264Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/2342.SOPEG_1265Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
rbfA protein networkhttps://string-db.org/network/2342.SOPEG_1266Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
truB protein networkhttps://string-db.org/network/2342.SOPEG_1267tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
rpsO protein networkhttps://string-db.org/network/2342.SOPEG_1268SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
pnp protein networkhttps://string-db.org/network/2342.SOPEG_1269Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
nlpI protein networkhttps://string-db.org/network/2342.SOPEG_1270Lipoprotein nlpI precursor; May be involved in cell division.
nadR protein networkhttps://string-db.org/network/2342.SOPEG_1280HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding [...]
serB protein networkhttps://string-db.org/network/2342.SOPEG_1282Phosphoserine phosphatase; COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA.
ytjB protein networkhttps://string-db.org/network/2342.SOPEG_1283Lipoate-protein ligase A; COG3726 Uncharacterized membrane protein affecting hemolysin expression.
deoD protein networkhttps://string-db.org/network/2342.SOPEG_1284COG0813 Purine-nucleoside phosphorylase.
deoB protein networkhttps://string-db.org/network/2342.SOPEG_1285Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
deoC protein networkhttps://string-db.org/network/2342.SOPEG_1287Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
yjtA protein networkhttps://string-db.org/network/2342.SOPEG_1291UPF0391 membrane protein SOPEG_1291; Target site duplication generated by insertion of ISSoEn2.
AHF73567.1 protein networkhttps://string-db.org/network/2342.SOPEG_1292Transposase ISSoEn1, IS5 ssgr IS903 family.
osmY protein networkhttps://string-db.org/network/2342.SOPEG_1293Osmotically inducible protein OsmY; COG2823 Predicted periplasmic or secreted lipoprotein.
prfC protein networkhttps://string-db.org/network/2342.SOPEG_1294Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...]
rimI protein networkhttps://string-db.org/network/2342.SOPEG_1295Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
holD protein networkhttps://string-db.org/network/2342.SOPEG_1296DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuc [...]
rsmC protein networkhttps://string-db.org/network/2342.SOPEG_1297Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.
AHF73573.1 protein networkhttps://string-db.org/network/2342.SOPEG_1299HmsT protein; COG2199 FOG: GGDEF domain.
yhbQ protein networkhttps://string-db.org/network/2342.SOPEG_1303UPF0213 protein SOPEG_1303; COG0693 Putative intracellular protease/amidase; putative general stress protein; Belongs to the UPF0213 family.
yhbS protein networkhttps://string-db.org/network/2342.SOPEG_1304Acetyltransferase; COG3153 Predicted acetyltransferase.
yhbU protein networkhttps://string-db.org/network/2342.SOPEG_1306Peptidase U32; COG3154 Putative lipid carrier protein; hypothetical protein.
SOPEG_1308 protein networkhttps://string-db.org/network/2342.SOPEG_1308Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73579.1 protein networkhttps://string-db.org/network/2342.SOPEG_1309Helper of transposition ISSoEn3, IS21 family.
AHF73580.1 protein networkhttps://string-db.org/network/2342.SOPEG_1310Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
zur protein networkhttps://string-db.org/network/2342.SOPEG_1311Zinc uptake transcriptional repressor; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
rcsA1 protein networkhttps://string-db.org/network/2342.SOPEG_1312Positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
dusA protein networkhttps://string-db.org/network/2342.SOPEG_1313tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines [...]
AHF73584.1 protein networkhttps://string-db.org/network/2342.SOPEG_1314Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
AHF73585.1 protein networkhttps://string-db.org/network/2342.SOPEG_1315N-methylhydantoinase (ATP-hydrolyzing).
AHF73586.1 protein networkhttps://string-db.org/network/2342.SOPEG_1316COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
pspG protein networkhttps://string-db.org/network/2342.SOPEG_1317Putative exported protein precursor.
qor2 protein networkhttps://string-db.org/network/2342.SOPEG_1318Quinone oxidoreductase, NADPH-dependent; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
dnaB protein networkhttps://string-db.org/network/2342.SOPEG_1319Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DN [...]
tyrB protein networkhttps://string-db.org/network/2342.SOPEG_1321Mutator family transposase; Required for the transposition of the insertion element.
yjbQ protein networkhttps://string-db.org/network/2342.SOPEG_1322yjbQ.
uvrA protein networkhttps://string-db.org/network/2342.SOPEG_1324UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 [...]
ssb protein networkhttps://string-db.org/network/2342.SOPEG_1325Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of act [...]
SOPEG_1329 protein networkhttps://string-db.org/network/2342.SOPEG_1329OsmC family protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; alkansulfonate monooxygenase, putative.
SOPEG_1334 protein networkhttps://string-db.org/network/2342.SOPEG_1334Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73597.1 protein networkhttps://string-db.org/network/2342.SOPEG_1335Transposase ISSoEn3, IS21 family.
AHF73598.1 protein networkhttps://string-db.org/network/2342.SOPEG_1336COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
SOPEG_1340 protein networkhttps://string-db.org/network/2342.SOPEG_1340Effector of murein hydrolase; COG0583 Transcriptional regulator; LysR family transcriptional regulator.
gltP protein networkhttps://string-db.org/network/2342.SOPEG_1345Proton/glutamate-aspartate symporter; Catalyzes the proton-dependent transport of glutamate and aspartate; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. Glt [...]
arcA protein networkhttps://string-db.org/network/2342.SOPEG_1354Aerobic respiration control protein arcA; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
thrA protein networkhttps://string-db.org/network/2342.SOPEG_1355Aspartokinase / Homoserine dehydrogenase; COG0527 Aspartokinases; In the C-terminal section; belongs to the homoserine dehydrogenase family.
thrB protein networkhttps://string-db.org/network/2342.SOPEG_1356Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
thrC protein networkhttps://string-db.org/network/2342.SOPEG_1357COG0498 Threonine synthase.
yaaA protein networkhttps://string-db.org/network/2342.SOPEG_1358yaaA; COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
yaaJ protein networkhttps://string-db.org/network/2342.SOPEG_1359Alanine-sodium transport protein; COG1115 Na+/alanine symporter.
dnaK protein networkhttps://string-db.org/network/2342.SOPEG_1363Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
dnaJ protein networkhttps://string-db.org/network/2342.SOPEG_1364Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
nhaA protein networkhttps://string-db.org/network/2342.SOPEG_1365Sodium-hydrogen antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
rpsT protein networkhttps://string-db.org/network/2342.SOPEG_136630S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
ribF protein networkhttps://string-db.org/network/2342.SOPEG_1367Bifunctional riboflavin kinase/FMN adenylyltransferase; COG0196 FAD synthase; Belongs to the ribF family.
ileS protein networkhttps://string-db.org/network/2342.SOPEG_1368isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
lspA protein networkhttps://string-db.org/network/2342.SOPEG_1369Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
ispH protein networkhttps://string-db.org/network/2342.SOPEG_13714-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
dapB protein networkhttps://string-db.org/network/2342.SOPEG_13734-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
carA protein networkhttps://string-db.org/network/2342.SOPEG_1374COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
carB protein networkhttps://string-db.org/network/2342.SOPEG_1375COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
folA protein networkhttps://string-db.org/network/2342.SOPEG_1376Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
apaH protein networkhttps://string-db.org/network/2342.SOPEG_1377Bis(5'-nucleosyl)-tetraphosphatase symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
apaG protein networkhttps://string-db.org/network/2342.SOPEG_1378CO2+/MG2+ efflux protein ApaG; COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport.
rsmA protein networkhttps://string-db.org/network/2342.SOPEG_1379Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
pdxA protein networkhttps://string-db.org/network/2342.SOPEG_13804-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decar [...]
surA protein networkhttps://string-db.org/network/2342.SOPEG_1381Peptidyl-prolyl cis-trans isomerase SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation [...]
lptD protein networkhttps://string-db.org/network/2342.SOPEG_1382LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
djlA protein networkhttps://string-db.org/network/2342.SOPEG_1383Dna-J like membrane chaperone protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a co [...]
yqjK2 protein networkhttps://string-db.org/network/2342.SOPEG_1395YqjK2; ISSoEn3, terminal inverted repeat.
yqjE2 protein networkhttps://string-db.org/network/2342.SOPEG_1396Inner membrane protein YqjE.
yqjD2 protein networkhttps://string-db.org/network/2342.SOPEG_1397Putative membrane protein YqjD.
yqjB2 protein networkhttps://string-db.org/network/2342.SOPEG_1398EnvZ/OmpR regulon moderator; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphory [...]
yqjA2 protein networkhttps://string-db.org/network/2342.SOPEG_1399DedA family inner membrane protein YqjA; COG0586 Uncharacterized membrane-associated protein.
AHF73639.1 protein networkhttps://string-db.org/network/2342.SOPEG_1400Transposase ISSoEn1, IS5 ssgr IS903 family.
uxaC2 protein networkhttps://string-db.org/network/2342.SOPEG_1406Uronate isomerase; COG0477 Permeases of the major facilitator superfamily; d-galactonate transporter.
uxaB1 protein networkhttps://string-db.org/network/2342.SOPEG_1407COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
uxaA1 protein networkhttps://string-db.org/network/2342.SOPEG_1408COG2721 Altronate dehydratase.
alx1 protein networkhttps://string-db.org/network/2342.SOPEG_1411Glutamine amidotransferase class-I; COG0861 Membrane protein TerC, possibly involved in tellurium resistance; putative transport protein.
lpxL protein networkhttps://string-db.org/network/2342.SOPEG_1422Lipid A biosynthesis lauroyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).
mdtG protein networkhttps://string-db.org/network/2342.SOPEG_1423COG0477 Permeases of the major facilitator superfamily.
msyB protein networkhttps://string-db.org/network/2342.SOPEG_1424secY/secA suppressor protein.
mdoG protein networkhttps://string-db.org/network/2342.SOPEG_1428Glucans biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
SOPEG_1430 protein networkhttps://string-db.org/network/2342.SOPEG_1430Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; RNase III inhibitor.
SOPEG_1439 protein networkhttps://string-db.org/network/2342.SOPEG_1439Phage protein.
hns protein networkhttps://string-db.org/network/2342.SOPEG_1447DNA-binding protein; COG1435 Thymidine kinase; thymidine kinase; Belongs to the histone-like protein H-NS family.
uge protein networkhttps://string-db.org/network/2342.SOPEG_1449dTDP-glucose 4,6-dehydratase; Transposase ISSoEn1, IS5 ssgr IS903 family.
udg protein networkhttps://string-db.org/network/2342.SOPEG_1450COG1004 Predicted UDP-glucose 6-dehydrogenase.
galU protein networkhttps://string-db.org/network/2342.SOPEG_1451UTP--glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
AHF73663.1 protein networkhttps://string-db.org/network/2342.SOPEG_1452Transposase ISSoEn1, IS5 ssgr IS903 family.
xthA protein networkhttps://string-db.org/network/2342.SOPEG_1456tRNA-Tyr; COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase.
sppA protein networkhttps://string-db.org/network/2342.SOPEG_1460Protease 4; COG0778 Nitroreductase; putative oxidoreductase.
ansA protein networkhttps://string-db.org/network/2342.SOPEG_1461COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
yeaC protein networkhttps://string-db.org/network/2342.SOPEG_1463Uncharacterized protein YeaC; COG1335 Amidases related to nicotinamidase; Nicotinamidase.
msrB protein networkhttps://string-db.org/network/2342.SOPEG_1464COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
gapA protein networkhttps://string-db.org/network/2342.SOPEG_1465COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
yeaE protein networkhttps://string-db.org/network/2342.SOPEG_1467Methylglyoxal reductase; Potential frameshift: common BLAST hit: gi|251789817|ref|YP_003004538.1| Aldose 1-epimerase; Aldose 1-epimerase.
yeaG protein networkhttps://string-db.org/network/2342.SOPEG_1469PrkA family serine protein kinase; COG3713 Outer membrane protein V; MltA-interacting MipA family protein.
cvrA protein networkhttps://string-db.org/network/2342.SOPEG_1471K(+)/H(+) antiporter NhaP2; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the [...]
SOPEG_1479 protein networkhttps://string-db.org/network/2342.SOPEG_1479Uncharacterized protein; COG0174 Glutamine synthetase; hypothetical protein.
AHF73677.1 protein networkhttps://string-db.org/network/2342.SOPEG_1480Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
SOPEG_1484 protein networkhttps://string-db.org/network/2342.SOPEG_1484Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73680.1 protein networkhttps://string-db.org/network/2342.SOPEG_1485Transposase ISSoEn3, IS21 family.
SOPEG_1487 protein networkhttps://string-db.org/network/2342.SOPEG_1487COG1175 ABC-type sugar transport systems, permease components; N-Acetyl-D-glucosamine ABC transport system permease protein.
SOPEG_1489 protein networkhttps://string-db.org/network/2342.SOPEG_1489Putative sugar ABC transporter ATP-binding protein; COG1409 Predicted phosphohydrolases; putative phosphohydrolase; Belongs to the ABC transporter superfamily.
AHF73683.1 protein networkhttps://string-db.org/network/2342.SOPEG_1490Glycerol-3-phosphate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
AHF73684.1 protein networkhttps://string-db.org/network/2342.SOPEG_1491COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
SOPEG_1495 protein networkhttps://string-db.org/network/2342.SOPEG_1495TetR family transcriptional regulator; COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog; ornithine cyclodeaminase/mu-crystallin.
SOPEG_1498 protein networkhttps://string-db.org/network/2342.SOPEG_1498Type I phosphodiesterase/nucleotide pyrophosphatase; Potential frameshift: common BLAST hit: gi|218890868|ref|YP_002439732.1| putative hydrolase; putative hydrolase.
AHF73687.1 protein networkhttps://string-db.org/network/2342.SOPEG_1499Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
gudP2 protein networkhttps://string-db.org/network/2342.SOPEG_1500Putative D-glucarate transporter, membrane protein; COG0477 Permeases of the major facilitator superfamily.
SOPEG_1505 protein networkhttps://string-db.org/network/2342.SOPEG_1505Phosphoribulokinase/uridine kinase family protein; ISSoEn3, terminal inverted repeat.
hemB protein networkhttps://string-db.org/network/2342.SOPEG_1510Porphobilinogen synthase; ISSoEn1, terminal inverted repeat; Belongs to the ALAD family.
czcS protein networkhttps://string-db.org/network/2342.SOPEG_1517Sensor protein; Member of a two-component regulatory system.
hmuT protein networkhttps://string-db.org/network/2342.SOPEG_1518COG4558 ABC-type hemin transport system, periplasmic component.
hmuU protein networkhttps://string-db.org/network/2342.SOPEG_1519COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
hmuV protein networkhttps://string-db.org/network/2342.SOPEG_1521Short-chain dehydrogenase/reductase SDR; COG4559 ABC-type hemin transport system, ATPase component; Hemin transport system ATP-binding protein hmuV; Belongs to the short-chain dehydrogenases/redu [...]
SOPEG_1523 protein networkhttps://string-db.org/network/2342.SOPEG_1523OmpR/PhoB-type domain-containing protein; Putative membrane receptor protein; COG1629 Outer membrane receptor proteins, mostly Fe transport; potential frameshift: common BLAST hit: gi|253988722|r [...]
AHF73696.1 protein networkhttps://string-db.org/network/2342.SOPEG_1524Hypothetical protein.
SOPEG_1534 protein networkhttps://string-db.org/network/2342.SOPEG_1534MarR family transcriptional regulator; Potential frameshift: common BLAST hit: gi|307129487|ref|YP_003881503.1| membrane fusion component of tripartite multidrug resistance system; membrane fusio [...]
SOPEG_1537 protein networkhttps://string-db.org/network/2342.SOPEG_1537Anaerobic C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
AHF73701.1 protein networkhttps://string-db.org/network/2342.SOPEG_1542Helper of transposition ISSoEn3, IS21 family.
AHF73702.1 protein networkhttps://string-db.org/network/2342.SOPEG_1543Transposase ISSoEn3, IS21 family.
aldH protein networkhttps://string-db.org/network/2342.SOPEG_1553Ketoglutarate semialdehyde dehydrogenase; COG2376 Dihydroxyacetone kinase; conserved hypothetical protein with Dak2 phosphatase domain.
AHF73706.1 protein networkhttps://string-db.org/network/2342.SOPEG_1554COG1414 Transcriptional regulator.
AHF73707.1 protein networkhttps://string-db.org/network/2342.SOPEG_1555Thiaminase; COG0819 Putative transcription activator.
AHF73708.1 protein networkhttps://string-db.org/network/2342.SOPEG_1556COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
AHF73709.1 protein networkhttps://string-db.org/network/2342.SOPEG_1557Hydroxymethylpyrimidine ABC transporter transmembrane component; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
AHF73710.1 protein networkhttps://string-db.org/network/2342.SOPEG_1558Hydroxymethylpyrimidine ABC transporter substrate-binding component; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
SOPEG_1563 protein networkhttps://string-db.org/network/2342.SOPEG_1563Colicin V secretion protein; Potential frameshift: common BLAST hit: gi|222104812|ref|YP_002539301.1| colicin V secretion/processing ATP binding protein; colicin V secretion/processing ATP bindin [...]
SOPEG_1566 protein networkhttps://string-db.org/network/2342.SOPEG_1566Putative iron(III) ABC transporter ATP-binding protein; Potential frameshift: common BLAST hit: gi|300717455|ref|YP_003742258.1| Major facilitator superfamily; Major facilitator superfamily.
SOPEG_1568 protein networkhttps://string-db.org/network/2342.SOPEG_1568COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; ABC transporter (iron.B12.siderophore.hemin) periplasmic substrate-binding component; Belongs to the binding-protein-dep [...]
ybiS protein networkhttps://string-db.org/network/2342.SOPEG_1586L,D-transpeptidase YbiS; COG2350 Uncharacterized protein conserved in bacteria; hypothetical protein.
AHF73723.1 protein networkhttps://string-db.org/network/2342.SOPEG_1587COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
yccA protein networkhttps://string-db.org/network/2342.SOPEG_1593tRNA-Ser; COG0582 Integrase; putative phage integrase; Belongs to the BI1 family.
tusE protein networkhttps://string-db.org/network/2342.SOPEG_1594tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
rlmI protein networkhttps://string-db.org/network/2342.SOPEG_159623S rRNA m(5)C1962 methyltransferase; COG1254 Acylphosphatases; Putative Acylphosphate phosphohydrolase.
hspQ protein networkhttps://string-db.org/network/2342.SOPEG_1597Heat shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family.
mgsA protein networkhttps://string-db.org/network/2342.SOPEG_1601Mutator family transposase; Required for the transposition of the insertion element.
helD protein networkhttps://string-db.org/network/2342.SOPEG_1602DNA helicase IV; COG0210 Superfamily I DNA and RNA helicases.
ompA protein networkhttps://string-db.org/network/2342.SOPEG_1613Mutator family transposase; Required for the transposition of the insertion element.
ycbZ protein networkhttps://string-db.org/network/2342.SOPEG_1615Endopeptidase La; COG3120 Uncharacterized protein conserved in bacteria; Ter macrodomain organizer matS-binding protein.
fabA protein networkhttps://string-db.org/network/2342.SOPEG_16163-hydroxydecanoyl-(acyl carrier protein) dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-deceno [...]
rmf protein networkhttps://string-db.org/network/2342.SOPEG_1617Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
uup protein networkhttps://string-db.org/network/2342.SOPEG_1621ABC transporter ATPase component; COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible membrane protein A.
rlmL protein networkhttps://string-db.org/network/2342.SOPEG_162223S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase super [...]
ycbX protein networkhttps://string-db.org/network/2342.SOPEG_1623Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; COG3217 Uncharacterized Fe-S protein.
zapC protein networkhttps://string-db.org/network/2342.SOPEG_1624zapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments an [...]
pyrD protein networkhttps://string-db.org/network/2342.SOPEG_1625Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
pepN protein networkhttps://string-db.org/network/2342.SOPEG_1626COG0308 Aminopeptidase N.
asnS protein networkhttps://string-db.org/network/2342.SOPEG_1628Asparagine--tRNA ligase; Potential frameshift: common BLAST hit: gi|85058994|ref|YP_454696.1| nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase.
AHF73743.1 protein networkhttps://string-db.org/network/2342.SOPEG_1629Repressor protein C; COG1395 Predicted transcriptional regulator.
AHF73744.1 protein networkhttps://string-db.org/network/2342.SOPEG_1630Hypothetical protein.
aspC1 protein networkhttps://string-db.org/network/2342.SOPEG_1632Aminotransferase; COG3203 Outer membrane protein (porin); outer membrane protein F.
SOPEG_1641 protein networkhttps://string-db.org/network/2342.SOPEG_1641COG3646 Uncharacterized phage-encoded protein; phage transcriptional regulator.
SOPEG_1647 protein networkhttps://string-db.org/network/2342.SOPEG_1647Putative regulatory protein MarR; ISSoEn2, terminal inverted repeat.
alr protein networkhttps://string-db.org/network/2342.SOPEG_1649Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
fadR protein networkhttps://string-db.org/network/2342.SOPEG_1652Fatty acid metabolism regulator protein; Multifunctional regulator of fatty acid metabolism.
dsbB protein networkhttps://string-db.org/network/2342.SOPEG_1653Periplasmic thiol:disulfide oxidoreductase DsbB required for DsbA reoxidation; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to t [...]
ycgN protein networkhttps://string-db.org/network/2342.SOPEG_1655ycgN; Belongs to the UPF0260 family.
ycgM protein networkhttps://string-db.org/network/2342.SOPEG_1657Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73757.1 protein networkhttps://string-db.org/network/2342.SOPEG_1658Helper of transposition ISSoEn3, IS21 family.
ycgL protein networkhttps://string-db.org/network/2342.SOPEG_1660YcgL domain-containing protein SOPEG_1660; ISSoEn2, terminal inverted repeat.
minC protein networkhttps://string-db.org/network/2342.SOPEG_1661Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments tha [...]
minD protein networkhttps://string-db.org/network/2342.SOPEG_1662Septum site-determining protein MinD; COG2894 Septum formation inhibitor-activating ATPase.
minE protein networkhttps://string-db.org/network/2342.SOPEG_1663Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensu [...]
yeaY protein networkhttps://string-db.org/network/2342.SOPEG_1665Starvation lipoprotein Slp-like protein; COG0349 Ribonuclease D; ribonuclease D.
yeaZ protein networkhttps://string-db.org/network/2342.SOPEG_1666yeaZ; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
yoaB protein networkhttps://string-db.org/network/2342.SOPEG_1668Putative translation initiation inhibitor; COG1199 Rad3-related DNA helicases; putative ATP-dependent helicase.
pabB protein networkhttps://string-db.org/network/2342.SOPEG_1670Para-aminobenzoate synthase aminase component; COG3140 Uncharacterized protein conserved in bacteria; hypothetical protein.
nudL protein networkhttps://string-db.org/network/2342.SOPEG_1671Putative NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. PCD1 subfamily.
sdaA protein networkhttps://string-db.org/network/2342.SOPEG_1672COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
yoaE protein networkhttps://string-db.org/network/2342.SOPEG_1674Putative inner membrane protein; ISSoEn2, terminal inverted repeat.
SOPEG_1688 protein networkhttps://string-db.org/network/2342.SOPEG_1688Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73773.1 protein networkhttps://string-db.org/network/2342.SOPEG_1689Helper of transposition ISSoEn3, IS21 family.
SOPEG_1692 protein networkhttps://string-db.org/network/2342.SOPEG_1692DUF1989 domain-containing protein; Putative transposase.
speB1 protein networkhttps://string-db.org/network/2342.SOPEG_1695Agmatinase; Potential frameshift: common BLAST hit: gi|222081595|ref|YP_002540959.1| amino acid ABC transporter; amino acid ABC transporter; Belongs to the arginase family.
istB protein networkhttps://string-db.org/network/2342.SOPEG_1698Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
istA protein networkhttps://string-db.org/network/2342.SOPEG_1699Transposase ISSoEn3, IS21 family.
SOPEG_1701 protein networkhttps://string-db.org/network/2342.SOPEG_1701Aminotransferase; Potential frameshift: common BLAST hit: gi|33600515|ref|NP_888075.1| allantoate amidohydrolase; Allantoate amidohydrolase.
AHF73779.1 protein networkhttps://string-db.org/network/2342.SOPEG_1702Hypothetical protein.
yebR protein networkhttps://string-db.org/network/2342.SOPEG_1704GAF domain-containing protein; COG2995 Uncharacterized paraquat-inducible protein A; hypothetical protein.
proQ protein networkhttps://string-db.org/network/2342.SOPEG_1705ProQ: influences osmotic activation of compatible solute ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an [...]
prc protein networkhttps://string-db.org/network/2342.SOPEG_1706COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
htpX protein networkhttps://string-db.org/network/2342.SOPEG_1707Heat shock protein HtpX; COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.
kdgR protein networkhttps://string-db.org/network/2342.SOPEG_1709Transcriptional regulator KdgR KDG operon repressor; Potential frameshift: common BLAST hit: gi|157370361|ref|YP_001478350.1| major facilitator transporter; major facilitator transporter.
AHF73785.1 protein networkhttps://string-db.org/network/2342.SOPEG_1710Hypothetical protein.
AHF73786.1 protein networkhttps://string-db.org/network/2342.SOPEG_1711Hypothetical protein.
AHF73787.1 protein networkhttps://string-db.org/network/2342.SOPEG_1712Hypothetical protein.
AHF73788.1 protein networkhttps://string-db.org/network/2342.SOPEG_1713Beta-lactamase domain-containing protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
yobF protein networkhttps://string-db.org/network/2342.SOPEG_1714yobF; Protein of unknown function (DUF2627); pfam10736.
cspC protein networkhttps://string-db.org/network/2342.SOPEG_1715COG1278 Cold shock proteins.
ybgL protein networkhttps://string-db.org/network/2342.SOPEG_17185-oxoprolinase subunit A; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
AHF73793.1 protein networkhttps://string-db.org/network/2342.SOPEG_1723Hypothetical protein.
ssaU protein networkhttps://string-db.org/network/2342.SOPEG_1724Type III secretion inner membrane protein; COG4792 Type III secretory pathway, component EscU; YscU, SpaS, EscU, HrcU, SsaU, homologous to flagellar export components.
ssaS protein networkhttps://string-db.org/network/2342.SOPEG_1726COG4791 Type III secretory pathway, component EscT; putative type III secretion apparatus.
ssaR protein networkhttps://string-db.org/network/2342.SOPEG_1727Type III secretion inner membrane protein; COG4790 Type III secretory pathway, component EscR; YscR, SpaR, HrcR, EscR homologous to flagellar export components.
ssaQ protein networkhttps://string-db.org/network/2342.SOPEG_1728COG1886 Flagellar motor switch/type III secretory pathway protein; YscQ homologous to flagellar export components.
ssaP protein networkhttps://string-db.org/network/2342.SOPEG_1729Putative type III secretion apparatus.
ssaO protein networkhttps://string-db.org/network/2342.SOPEG_1730Putative type III secretion apparatus.
ssaN protein networkhttps://string-db.org/network/2342.SOPEG_1731COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; Homologs YscN, SpaL, MxiB, HrcN, EscN.
ssaV protein networkhttps://string-db.org/network/2342.SOPEG_1732Type III secretion inner membrane channel protein; COG4789 Type III secretory pathway, component EscV; Homologs LcrD, HrcV, EscV, SsaV.
ssaM protein networkhttps://string-db.org/network/2342.SOPEG_1733Type III secretion system protein SsaM.
ssaL protein networkhttps://string-db.org/network/2342.SOPEG_1734Type III secretion system protein SsaL.
ssaK protein networkhttps://string-db.org/network/2342.SOPEG_1735Type III secretion system protein SsaK.
AHF73805.1 protein networkhttps://string-db.org/network/2342.SOPEG_1736Putative type III secretion apparatus.
ssaJ protein networkhttps://string-db.org/network/2342.SOPEG_1737COG4669 Type III secretory pathway, lipoprotein EscJ.
ssaI protein networkhttps://string-db.org/network/2342.SOPEG_1738Putative type III secretion apparatus.
ssaH protein networkhttps://string-db.org/network/2342.SOPEG_1739Putative type III secretion apparatus.
ssaG protein networkhttps://string-db.org/network/2342.SOPEG_1740Type III secretion system needle protein SsaG.
sseE protein networkhttps://string-db.org/network/2342.SOPEG_1742COG0457 FOG: TPR repeat; type III secretion system chaperone protein SscB.
sseD protein networkhttps://string-db.org/network/2342.SOPEG_1743Type III secretion system effector SseD.
sseC protein networkhttps://string-db.org/network/2342.SOPEG_1744Type III secretion system effector SseC.
sscA protein networkhttps://string-db.org/network/2342.SOPEG_1745Type III secretion system chaparone SscA; COG0457 FOG: TPR repeat.
sseB protein networkhttps://string-db.org/network/2342.SOPEG_1746Type III secretion effector SseB; COG1132 ABC-type multidrug transport system, ATPase and permease components.
ssaE protein networkhttps://string-db.org/network/2342.SOPEG_1748Putative pathogenicity island protein.
ssaD protein networkhttps://string-db.org/network/2342.SOPEG_1749Type III secretion system apparatus SsaD.
ssaC protein networkhttps://string-db.org/network/2342.SOPEG_1750Type III secretion system apparatus SsaC; COG1450 Type II secretory pathway, component PulD.
ssaB protein networkhttps://string-db.org/network/2342.SOPEG_1751Pathogenicity island chaperone protein SpiC.
ssrA protein networkhttps://string-db.org/network/2342.SOPEG_1752Secretion system regulator: Sensor component; COG0642 Signal transduction histidine kinase.
ssrB protein networkhttps://string-db.org/network/2342.SOPEG_1753Secretion system regulator of DegU/UvrY/BvgA type; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
SOPEG_1759 protein networkhttps://string-db.org/network/2342.SOPEG_1759ParA-like protein; ISSoEn2, terminal inverted repeat.
AHF73824.1 protein networkhttps://string-db.org/network/2342.SOPEG_1760Hypothetical protein.
AHF73825.1 protein networkhttps://string-db.org/network/2342.SOPEG_1761Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
AHF73826.1 protein networkhttps://string-db.org/network/2342.SOPEG_1762Muramoyltetrapeptide carboxypeptidase; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
SOPEG_1765 protein networkhttps://string-db.org/network/2342.SOPEG_1765ABC transporter related protein; COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase.
SOPEG_1774 protein networkhttps://string-db.org/network/2342.SOPEG_1774Transposase ISSoEn3, IS21 family.
AHF73829.1 protein networkhttps://string-db.org/network/2342.SOPEG_1775Transposase ISSoEn2, IS256 family.
SOPEG_1778 protein networkhttps://string-db.org/network/2342.SOPEG_1778Beta-N-acetylhexosaminidase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; monooxygenase FAD-binding protein.
yddW protein networkhttps://string-db.org/network/2342.SOPEG_1779yddW; COG1649 Uncharacterized protein conserved in bacteria.
sitD protein networkhttps://string-db.org/network/2342.SOPEG_1780Manganese ABC transporter inner membrane permease protein SitD; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
AHF73833.1 protein networkhttps://string-db.org/network/2342.SOPEG_1781Transposase ISSoEn1, IS5 ssgr IS903 family.
tadG protein networkhttps://string-db.org/network/2342.SOPEG_17922-Keto-D-gluconate dehydrogenase membrane-bound cytochrome c; Target site duplication generated by insertion of ISSoEn1.
yebY protein networkhttps://string-db.org/network/2342.SOPEG_1798Putative exported protein; ISSoEn2, terminal inverted repeat.
yebZ protein networkhttps://string-db.org/network/2342.SOPEG_1799Copper resistance protein D.
yobA protein networkhttps://string-db.org/network/2342.SOPEG_1800COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
holE protein networkhttps://string-db.org/network/2342.SOPEG_1802DNA polymerase III theta subunit; COG1528 Ferritin-like protein; ferritin.
yeaN protein networkhttps://string-db.org/network/2342.SOPEG_1807Major facilitator transporter; COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); Phosphoribosylglycinamide formyltransferase.
yeaM protein networkhttps://string-db.org/network/2342.SOPEG_1808Transcriptional regulator AraC family; COG2207 AraC-type DNA-binding domain-containing proteins.
SOPEG_1812 protein networkhttps://string-db.org/network/2342.SOPEG_1812Uncharacterized protein.
AHF73845.1 protein networkhttps://string-db.org/network/2342.SOPEG_1813Hypothetical protein.
pgsA protein networkhttps://string-db.org/network/2342.SOPEG_1829tRNA-Gly; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
uvrC protein networkhttps://string-db.org/network/2342.SOPEG_1830Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsib [...]
uvrY protein networkhttps://string-db.org/network/2342.SOPEG_1831BarA-associated response regulator UvrY (GacA SirA); COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
AHF73854.1 protein networkhttps://string-db.org/network/2342.SOPEG_1838Hypothetical protein.
AHF73855.1 protein networkhttps://string-db.org/network/2342.SOPEG_1839Hypothetical protein; COG1403 Restriction endonuclease.
AHF73856.1 protein networkhttps://string-db.org/network/2342.SOPEG_1840Terminase small subunit.
SOPEG_1845 protein networkhttps://string-db.org/network/2342.SOPEG_1845Phage protein; COG0114 Fumarase; major capsid protein.
AHF73859.1 protein networkhttps://string-db.org/network/2342.SOPEG_1846Hypothetical protein; COG5614 Bacteriophage head-tail adaptor.
AHF73860.1 protein networkhttps://string-db.org/network/2342.SOPEG_1847Hypothetical protein.
AHF73861.1 protein networkhttps://string-db.org/network/2342.SOPEG_1848Hypothetical protein.
AHF73862.1 protein networkhttps://string-db.org/network/2342.SOPEG_1849Hypothetical protein.
AHF73863.1 protein networkhttps://string-db.org/network/2342.SOPEG_1850Hypothetical protein.
SOPEG_1864 protein networkhttps://string-db.org/network/2342.SOPEG_1864Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF73867.1 protein networkhttps://string-db.org/network/2342.SOPEG_1865Transposase ISSoEn1, IS5 ssgr IS903 family.
AHF73868.1 protein networkhttps://string-db.org/network/2342.SOPEG_1866Phage protein.
AHF73869.1 protein networkhttps://string-db.org/network/2342.SOPEG_1867Hypothetical protein.
AHF73870.1 protein networkhttps://string-db.org/network/2342.SOPEG_1868Hypothetical protein.
AHF73871.1 protein networkhttps://string-db.org/network/2342.SOPEG_1869COG3646 Uncharacterized phage-encoded protein.
AHF73872.1 protein networkhttps://string-db.org/network/2342.SOPEG_1870Phage protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
SOPEG_1873 protein networkhttps://string-db.org/network/2342.SOPEG_1873Uncharacterized protein; ISSoEn2, terminal inverted repeat.
SOPEG_1875 protein networkhttps://string-db.org/network/2342.SOPEG_1875Uncharacterized protein.
AHF73876.1 protein networkhttps://string-db.org/network/2342.SOPEG_1876Transposase ISSoEn1, IS5 ssgr IS903 family.
AHF73877.1 protein networkhttps://string-db.org/network/2342.SOPEG_1877Putative phage anti-termination protein.
AHF73878.1 protein networkhttps://string-db.org/network/2342.SOPEG_1878Repressor protein C2; COG1396 Predicted transcriptional regulators.
pqqD protein networkhttps://string-db.org/network/2342.SOPEG_1904PqqA binding protein; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.
pqqE protein networkhttps://string-db.org/network/2342.SOPEG_1905Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
tag protein networkhttps://string-db.org/network/2342.SOPEG_1911Flavin reductase-like protein; Potential frameshift: common BLAST hit: gi|292901116|ref|YP_003540485.1| DeoR family transcriptional regulator; DeoR family transcriptional regulator.
lacY1 protein networkhttps://string-db.org/network/2342.SOPEG_1916Lactose transport protein LacY; Target site duplication generated by insertion of ISSoEn2.
SOPEG_1918 protein networkhttps://string-db.org/network/2342.SOPEG_1918Xanthine/uracil/thiamine/ascorbate permease family protein; Potential frameshift: common BLAST hit: gi|22126463|ref|NP_669886.1| alpha-galactosidase; alpha-galactosidase.
alkA protein networkhttps://string-db.org/network/2342.SOPEG_1919DNA-3-methyladenine glycosylase II; COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
yeeX protein networkhttps://string-db.org/network/2342.SOPEG_1921UPF0265 protein SOPEG_1921; Potential frameshift: common BLAST hit: gi|260597961|ref|YP_003210532.1| l-lactate dehydrogenase 2; l-lactate dehydrogenase 2; Belongs to the UPF0265 family.
sbcB protein networkhttps://string-db.org/network/2342.SOPEG_1930COG2925 Exonuclease I.
SOPEG_1934 protein networkhttps://string-db.org/network/2342.SOPEG_1934Putative prophage antirepressor; ISSoEn2, terminal inverted repeat.
SOPEG_1939 protein networkhttps://string-db.org/network/2342.SOPEG_1939Aliphatic amidase amiE; COG5464 Uncharacterized conserved protein; putative phage transposase.
AHF73901.1 protein networkhttps://string-db.org/network/2342.SOPEG_1940Transposase ISSoEn1, IS5 ssgr IS903 family.
codB2 protein networkhttps://string-db.org/network/2342.SOPEG_1941COG1457 Purine-cytosine permease and related proteins.
SOPEG_1945 protein networkhttps://string-db.org/network/2342.SOPEG_1945IS21 family.
AHF73904.1 protein networkhttps://string-db.org/network/2342.SOPEG_1946Helper of transposition ISSoEn3, IS21 family.
cpsB protein networkhttps://string-db.org/network/2342.SOPEG_1952Mannose-1-phosphate guanylyltransferase; COG4993 Glucose dehydrogenase; Glucose dehydrogenase PQQ-dependent; Belongs to the mannose-6-phosphate isomerase type 2 family.
cpsG protein networkhttps://string-db.org/network/2342.SOPEG_1953COG1109 Phosphomannomutase.
AHF73909.1 protein networkhttps://string-db.org/network/2342.SOPEG_1954ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
AHF73910.1 protein networkhttps://string-db.org/network/2342.SOPEG_1955ABC transporter related protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
rbfU protein networkhttps://string-db.org/network/2342.SOPEG_1958Mannosyltransferase B; COG0438 Glycosyltransferase; glycosyl transferase group 1.
AHF73912.1 protein networkhttps://string-db.org/network/2342.SOPEG_1959COG0438 Glycosyltransferase.
gnd protein networkhttps://string-db.org/network/2342.SOPEG_19606-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
nanE protein networkhttps://string-db.org/network/2342.SOPEG_1970N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
AHF73919.1 protein networkhttps://string-db.org/network/2342.SOPEG_1971Lipoprotein; COG5544 Predicted periplasmic lipoprotein.
pssA protein networkhttps://string-db.org/network/2342.SOPEG_1972CDP-diacylglycerol--serine O-phosphatidyltransferase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
yfiP protein networkhttps://string-db.org/network/2342.SOPEG_1974DTW domain-containing protein; COG1042 Acyl-CoA synthetase (NDP forming); hypothetical protein.
yfiF protein networkhttps://string-db.org/network/2342.SOPEG_1976Putative tRNA/rRNA methyltransferase yfiF; COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 2; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltra [...]
mprA protein networkhttps://string-db.org/network/2342.SOPEG_1977Transcriptional repressor MprA; COG1846 Transcriptional regulators.
ygaY protein networkhttps://string-db.org/network/2342.SOPEG_1979MFS permease protein; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); putative amino acid transporter.
proX1 protein networkhttps://string-db.org/network/2342.SOPEG_1980COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
proW protein networkhttps://string-db.org/network/2342.SOPEG_1982COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine / proline ABC transporter - periplasmic binding protein.
nrdF protein networkhttps://string-db.org/network/2342.SOPEG_1985Ribonucleotide reductase of class Ib (aerobic) beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonuc [...]
nrdI protein networkhttps://string-db.org/network/2342.SOPEG_1987Protein NrdI; Probably involved in ribonucleotide reductase function.
nrdH protein networkhttps://string-db.org/network/2342.SOPEG_1988Glutaredoxin-like protein NrdH required for reduction of Ribonucleotide reductase class Ib; COG0695 Glutaredoxin and related proteins.
SOPEG_1995 protein networkhttps://string-db.org/network/2342.SOPEG_1995Transposase Mu family; Putative prophage exported protein.
SOPEG_1997 protein networkhttps://string-db.org/network/2342.SOPEG_1997Putative prophage transcriptional regulator; Transposase Mu family.
lnt protein networkhttps://string-db.org/network/2342.SOPEG_2001Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
ybeX protein networkhttps://string-db.org/network/2342.SOPEG_2002Magnesium/cobalt efflux protein CorC; COG4535 Putative Mg2+ and Co2+ transporter CorC.
ybeY protein networkhttps://string-db.org/network/2342.SOPEG_2003Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
ybeZ protein networkhttps://string-db.org/network/2342.SOPEG_2004COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
miaB protein networkhttps://string-db.org/network/2342.SOPEG_2005tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at po [...]
ubiF protein networkhttps://string-db.org/network/2342.SOPEG_20063-demethoxyubiquinol 3-hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
AHF73943.1 protein networkhttps://string-db.org/network/2342.SOPEG_2009Phage DNA-binding protein.
AHF73944.1 protein networkhttps://string-db.org/network/2342.SOPEG_2010Hypothetical protein; COG2944 Predicted transcriptional regulator.
AHF73945.1 protein networkhttps://string-db.org/network/2342.SOPEG_2011COG0582 Integrase.
artI protein networkhttps://string-db.org/network/2342.SOPEG_2015Arginine ABC transporter periplasmic arginine-binding protein ArtI; COG4215 ABC-type arginine transport system, permease component; arginine transporter permease subunit ArtQ; Belongs to the bact [...]
artP protein networkhttps://string-db.org/network/2342.SOPEG_2016Arginine ABC transporter ATP-binding protein ArtP; COG4161 ABC-type arginine transport system, ATPase component.
ybjP protein networkhttps://string-db.org/network/2342.SOPEG_2017Putative lipoprotein.
poxB protein networkhttps://string-db.org/network/2342.SOPEG_2020Pyruvate dehydrogenase; Potential frameshift: common BLAST hit: gi|157369906|ref|YP_001477895.1| L-threonine aldolase; L-threonine aldolase; Belongs to the TPP enzyme family.
cspD protein networkhttps://string-db.org/network/2342.SOPEG_2022Cold shock protein CspD; COG2431 Predicted membrane protein; hypothetical protein.
clpS protein networkhttps://string-db.org/network/2342.SOPEG_2023ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
clpA protein networkhttps://string-db.org/network/2342.SOPEG_2024ATP-dependent Clp protease ATP-binding subunit ClpA; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
infA protein networkhttps://string-db.org/network/2342.SOPEG_2026Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
aat protein networkhttps://string-db.org/network/2342.SOPEG_2027Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-te [...]
cydC protein networkhttps://string-db.org/network/2342.SOPEG_2028Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
cydD protein networkhttps://string-db.org/network/2342.SOPEG_2029Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components.
trxB protein networkhttps://string-db.org/network/2342.SOPEG_2030COG0492 Thioredoxin reductase.
lrp protein networkhttps://string-db.org/network/2342.SOPEG_2031Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein; COG1522 Transcriptional regulators.
ftsK protein networkhttps://string-db.org/network/2342.SOPEG_2032Cell division protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
lolA protein networkhttps://string-db.org/network/2342.SOPEG_2033Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the re [...]
serS protein networkhttps://string-db.org/network/2342.SOPEG_2035Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further co [...]
AHF73963.1 protein networkhttps://string-db.org/network/2342.SOPEG_2036Putative MFS family transporter protein; COG0477 Permeases of the major facilitator superfamily.
pflA protein networkhttps://string-db.org/network/2342.SOPEG_2038Pyruvate formate-lyase-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodo [...]
serC protein networkhttps://string-db.org/network/2342.SOPEG_2045Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belon [...]
aroA protein networkhttps://string-db.org/network/2342.SOPEG_20463-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
cmk protein networkhttps://string-db.org/network/2342.SOPEG_2047COG0283 Cytidylate kinase.
rpsA protein networkhttps://string-db.org/network/2342.SOPEG_2048SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
ihfB protein networkhttps://string-db.org/network/2342.SOPEG_2049Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tran [...]
guaC protein networkhttps://string-db.org/network/2342.SOPEG_2051GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and [...]
coaE protein networkhttps://string-db.org/network/2342.SOPEG_2052dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
yacF protein networkhttps://string-db.org/network/2342.SOPEG_2053yacF; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
yacG protein networkhttps://string-db.org/network/2342.SOPEG_2056Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF73975.1 protein networkhttps://string-db.org/network/2342.SOPEG_2057Transposase ISSoEn3, IS21 family.
mutT protein networkhttps://string-db.org/network/2342.SOPEG_2058Nucleoside triphosphate pyrophosphohydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
secA protein networkhttps://string-db.org/network/2342.SOPEG_2059Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the [...]
secM protein networkhttps://string-db.org/network/2342.SOPEG_2061Uncharacterized protein; SecA regulator SecM.
lpxC protein networkhttps://string-db.org/network/2342.SOPEG_2062UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed st [...]
ftsZ protein networkhttps://string-db.org/network/2342.SOPEG_2063Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
ftsA protein networkhttps://string-db.org/network/2342.SOPEG_2064Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
ftsQ protein networkhttps://string-db.org/network/2342.SOPEG_2065Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins [...]
murC protein networkhttps://string-db.org/network/2342.SOPEG_2066UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murG protein networkhttps://string-db.org/network/2342.SOPEG_2067Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid interme [...]
ftsW protein networkhttps://string-db.org/network/2342.SOPEG_2068Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.
murD protein networkhttps://string-db.org/network/2342.SOPEG_2069UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the Mur [...]
mraY protein networkhttps://string-db.org/network/2342.SOPEG_2070phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murF protein networkhttps://string-db.org/network/2342.SOPEG_2071UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
murE protein networkhttps://string-db.org/network/2342.SOPEG_2072UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG [...]
ftsI protein networkhttps://string-db.org/network/2342.SOPEG_2073Essential cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
ftsL protein networkhttps://string-db.org/network/2342.SOPEG_2074Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins [...]
rsmH protein networkhttps://string-db.org/network/2342.SOPEG_2075rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
mraZ protein networkhttps://string-db.org/network/2342.SOPEG_2076Cell division protein MraZ; Negatively regulates its own expression and that of the subsequent genes in the proximal part of the division and cell wall (dcw) gene cluster. Acts by binding directl [...]
fruR protein networkhttps://string-db.org/network/2342.SOPEG_2078Fructose repressor FruR LacI family; COG1609 Transcriptional regulators.
ilvH protein networkhttps://string-db.org/network/2342.SOPEG_2079COG0440 Acetolactate synthase, small (regulatory) subunit.
leuB protein networkhttps://string-db.org/network/2342.SOPEG_20823-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
leuD protein networkhttps://string-db.org/network/2342.SOPEG_20843-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Leu [...]
tbpA protein networkhttps://string-db.org/network/2342.SOPEG_2089Cobalt/zinc/cadmium efflux RND transporter membrane fusion protein CzcB family; COG3696 Putative silver efflux pump; C-terminal portion of this ORF is located at base (1395340..1395999); putative [...]
SOPEG_2100 protein networkhttps://string-db.org/network/2342.SOPEG_2100Putative prophage exported protein.
AHF74004.1 protein networkhttps://string-db.org/network/2342.SOPEG_2101Hypothetical protein.
SOPEG_2103 protein networkhttps://string-db.org/network/2342.SOPEG_2103Putative exonuclease; Target site duplication generated by insertion of ISSoEn1.
nspV protein networkhttps://string-db.org/network/2342.SOPEG_2111Modification methylase NspV; COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; anaerobic ribonucleoside triphosphate reductase.
AHF74009.1 protein networkhttps://string-db.org/network/2342.SOPEG_2112Putative type II restriction enzyme.
yjgF protein networkhttps://string-db.org/network/2342.SOPEG_2113yjgF; COG0251 Putative translation initiation inhibitor, yjgF family.
pyrI protein networkhttps://string-db.org/network/2342.SOPEG_2114Aspartate carbamoyltransferase regulatory chain (PyrI); Involved in allosteric regulation of aspartate carbamoyltransferase.
argI protein networkhttps://string-db.org/network/2342.SOPEG_2117Ornithine carbamoyltransferase subunit I; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
rraB protein networkhttps://string-db.org/network/2342.SOPEG_2118RNase E inhibitor protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by alt [...]
valS protein networkhttps://string-db.org/network/2342.SOPEG_2121Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, [...]
holC protein networkhttps://string-db.org/network/2342.SOPEG_2122COG2927 DNA polymerase III, chi subunit.
pepA protein networkhttps://string-db.org/network/2342.SOPEG_2123Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various pept [...]
lptF protein networkhttps://string-db.org/network/2342.SOPEG_2124Lipopolysaccharide ABC transporter permease LptF; COG0795 Predicted permeases.
nei protein networkhttps://string-db.org/network/2342.SOPEG_2129tRNA-Leu; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyr [...]
AHF74020.1 protein networkhttps://string-db.org/network/2342.SOPEG_2130Hypothetical protein.
rne protein networkhttps://string-db.org/network/2342.SOPEG_2138Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation [...]
rluC protein networkhttps://string-db.org/network/2342.SOPEG_2139Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
yceD protein networkhttps://string-db.org/network/2342.SOPEG_2141Protein clustered with ribosomal protein L32p; COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; hypothetical protein.
rpmF protein networkhttps://string-db.org/network/2342.SOPEG_2142COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
plsX protein networkhttps://string-db.org/network/2342.SOPEG_2143Phosphate:acyl-ACP acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acy [...]
fabH protein networkhttps://string-db.org/network/2342.SOPEG_21443-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
fabD protein networkhttps://string-db.org/network/2342.SOPEG_2145Malonyl CoA-(acyl-carrier-protein) transacylase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
fabG protein networkhttps://string-db.org/network/2342.SOPEG_21463-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
acpP protein networkhttps://string-db.org/network/2342.SOPEG_2147Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
fabF protein networkhttps://string-db.org/network/2342.SOPEG_21483-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
pabC protein networkhttps://string-db.org/network/2342.SOPEG_2149Aminodeoxychorismate lyase; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
yceG protein networkhttps://string-db.org/network/2342.SOPEG_2150yceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
tmk protein networkhttps://string-db.org/network/2342.SOPEG_2151Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
holB protein networkhttps://string-db.org/network/2342.SOPEG_2152DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication.
ycfH protein networkhttps://string-db.org/network/2342.SOPEG_2153Putative deoxyribonuclease YcfH; COG0084 Mg-dependent DNase.
ptsG protein networkhttps://string-db.org/network/2342.SOPEG_2154PTS system glucose-specific transporter subunits IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
SOPEG_2169 protein networkhttps://string-db.org/network/2342.SOPEG_2169LysM domain-containing protein; LysM domain/BON superfamily protein; Provisional.
cls protein networkhttps://string-db.org/network/2342.SOPEG_2170Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
yciU protein networkhttps://string-db.org/network/2342.SOPEG_2171YciU; COG3099 Uncharacterized protein conserved in bacteria; Belongs to the UPF0263 family.
oppA protein networkhttps://string-db.org/network/2342.SOPEG_2181Phage protein; COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein.
AHF74048.1 protein networkhttps://string-db.org/network/2342.SOPEG_2182Phage transcriptional regulator; COG3646 Uncharacterized phage-encoded protein.
AHF74049.1 protein networkhttps://string-db.org/network/2342.SOPEG_2183Hypothetical protein.
AHF74052.1 protein networkhttps://string-db.org/network/2342.SOPEG_2189Transposase Mu family.
SOPEG_2193 protein networkhttps://string-db.org/network/2342.SOPEG_2193Uncharacterized protein; ISSoEn3, terminal inverted repeat.
AHF74054.1 protein networkhttps://string-db.org/network/2342.SOPEG_2194Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
AHF74055.1 protein networkhttps://string-db.org/network/2342.SOPEG_2195Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
finO protein networkhttps://string-db.org/network/2342.SOPEG_2196Putative fertility inhibition protein FinO; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
AHF74057.1 protein networkhttps://string-db.org/network/2342.SOPEG_2197Transposase, ISNCY ssgr ISPlu15 family.
AHF74060.1 protein networkhttps://string-db.org/network/2342.SOPEG_2207Hypothetical protein.
ycfF protein networkhttps://string-db.org/network/2342.SOPEG_2208Purine nucleoside phosphoramidase; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
ycfL protein networkhttps://string-db.org/network/2342.SOPEG_2209Outer membrane lipoprotein that is part of a salvage cluster; COG5633 Predicted periplasmic lipoprotein.
lpoB protein networkhttps://string-db.org/network/2342.SOPEG_2210Penicillin-binding protein activator LpoB; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
AHF74066.1 protein networkhttps://string-db.org/network/2342.SOPEG_2218Hypothetical protein.
AHF74067.1 protein networkhttps://string-db.org/network/2342.SOPEG_2219Hypothetical protein.
SOPEG_2223 protein networkhttps://string-db.org/network/2342.SOPEG_2223Putative capsid scaffolding protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs; predicted terminase, ATPase subunit.
SOPEG_2225 protein networkhttps://string-db.org/network/2342.SOPEG_2225Phage terminase, endonuclease small subunit M; Potential frameshift: common BLAST hit: gi|291282863|ref|YP_003499681.1| putative major capsid protein; putative major capsid protein.
AHF74070.1 protein networkhttps://string-db.org/network/2342.SOPEG_2226COG5004 P2-like prophage tail protein X.
AHF74071.1 protein networkhttps://string-db.org/network/2342.SOPEG_2227Hypothetical protein.
SOPEG_2230 protein networkhttps://string-db.org/network/2342.SOPEG_2230P2 phage tail completion R family protein; COG0481 Membrane GTPase LepA; hypothetical protein.
AHF74073.1 protein networkhttps://string-db.org/network/2342.SOPEG_2231Phage virion morphogenesis protein.
SOPEG_2233 protein networkhttps://string-db.org/network/2342.SOPEG_2233GPW/gp25 family protein; Potential frameshift: common BLAST hit: gi|242241216|ref|YP_002989397.1| phage baseplate assembly protein V; phage baseplate assembly protein V.
AHF74075.1 protein networkhttps://string-db.org/network/2342.SOPEG_2234COG3948 Phage-related baseplate assembly protein.
AHF74076.1 protein networkhttps://string-db.org/network/2342.SOPEG_2235COG4385 Bacteriophage P2-related tail formation protein.
hrpA1 protein networkhttps://string-db.org/network/2342.SOPEG_2250ATP-dependent RNA helicase HrpA; COG1182 Acyl carrier protein phosphodiesterase; NADH:quinone reductase, FMN dependent / NADH-azoreductase.
pntA1 protein networkhttps://string-db.org/network/2342.SOPEG_2258NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...]
pntB1 protein networkhttps://string-db.org/network/2342.SOPEG_2259NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...]
SOPEG_2262 protein networkhttps://string-db.org/network/2342.SOPEG_2262Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF74086.1 protein networkhttps://string-db.org/network/2342.SOPEG_2263Transposase ISSoEn1, IS5 ssgr IS903 family.
spy protein networkhttps://string-db.org/network/2342.SOPEG_2268Periplasmic protein; Putative invasin.
AHF74089.1 protein networkhttps://string-db.org/network/2342.SOPEG_2269Transposase ISSoEn1, IS5 ssgr IS903 family.
nadE protein networkhttps://string-db.org/network/2342.SOPEG_2273NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
osmE protein networkhttps://string-db.org/network/2342.SOPEG_2274DNA-binding transcriptional activator OsmE.
acrB1 protein networkhttps://string-db.org/network/2342.SOPEG_2277RND efflux system outer membrane lipoprotein; Potential frameshift: common BLAST hit: gi|291617083|ref|YP_003519825.1| AcrB; RND efflux system inner membrane transporter component AcrB.
AHF74094.1 protein networkhttps://string-db.org/network/2342.SOPEG_2278COG1309 Transcriptional regulator.
AHF74095.1 protein networkhttps://string-db.org/network/2342.SOPEG_2279COG1309 Transcriptional regulator.
katE protein networkhttps://string-db.org/network/2342.SOPEG_2280Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
kduD1 protein networkhttps://string-db.org/network/2342.SOPEG_22812-deoxy-D-gluconate 3-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
SOPEG_2289 protein networkhttps://string-db.org/network/2342.SOPEG_2289Putative phage gene.
AHF74101.1 protein networkhttps://string-db.org/network/2342.SOPEG_2290Hypothetical protein; COG3299 Uncharacterized homolog of phage Mu protein gp47.
ycfP protein networkhttps://string-db.org/network/2342.SOPEG_2300ycfP; COG3150 Predicted esterase; Belongs to the UPF0227 family.
ndh protein networkhttps://string-db.org/network/2342.SOPEG_2301COG1252 NADH dehydrogenase, FAD-containing subunit.
mfd protein networkhttps://string-db.org/network/2342.SOPEG_2303Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
lolC protein networkhttps://string-db.org/network/2342.SOPEG_2304COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
lolD protein networkhttps://string-db.org/network/2342.SOPEG_2305Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
lolE protein networkhttps://string-db.org/network/2342.SOPEG_2306COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
pepT protein networkhttps://string-db.org/network/2342.SOPEG_2308Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
phoQ protein networkhttps://string-db.org/network/2342.SOPEG_2310Sensor protein PhoQ.
phoP protein networkhttps://string-db.org/network/2342.SOPEG_2311DNA-binding transcriptional regulator PhoP; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
purB protein networkhttps://string-db.org/network/2342.SOPEG_2312COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
hflD protein networkhttps://string-db.org/network/2342.SOPEG_2313Lysogenization regulator; COG2915 Uncharacterized protein involved in purine metabolism.
mnmA protein networkhttps://string-db.org/network/2342.SOPEG_2314tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln), leading to the formation of [...]
nudJ protein networkhttps://string-db.org/network/2342.SOPEG_2315Nudix-like NDP and NTP phosphohydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. NudJ subfamily.
rluE protein networkhttps://string-db.org/network/2342.SOPEG_2317Uncharacterized protein; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine 2457 synthase.
AHF74118.1 protein networkhttps://string-db.org/network/2342.SOPEG_2318Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
SOPEG_2320 protein networkhttps://string-db.org/network/2342.SOPEG_2320Uncharacterized protein; COG0668 Small-conductance mechanosensitive channel; putative inner membrane protein.
SOPEG_2323 protein networkhttps://string-db.org/network/2342.SOPEG_2323ThiJ/PfpI family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase.
SOPEG_2325 protein networkhttps://string-db.org/network/2342.SOPEG_2325GCN5-related N-acetyltransferase; COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase.
argG protein networkhttps://string-db.org/network/2342.SOPEG_2329Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
SOPEG_2333 protein networkhttps://string-db.org/network/2342.SOPEG_2333COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Chelated iron transport system membrane protein yfeD.
mntR protein networkhttps://string-db.org/network/2342.SOPEG_2336Mn-dependent transcriptional regulator MntR; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; iron ABC transporter, periplasmic substrate-binding protein.
fumC protein networkhttps://string-db.org/network/2342.SOPEG_2341Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily [...]
manA protein networkhttps://string-db.org/network/2342.SOPEG_2342COG1482 Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
add protein networkhttps://string-db.org/network/2342.SOPEG_2344Adenosine deaminase; Putative exported protein.
araF protein networkhttps://string-db.org/network/2342.SOPEG_2348L-arabinose-binding periplasmic protein; COG1129 ABC-type sugar transport system, ATPase component; L-arabinose transporter ATP-binding protein.
araA protein networkhttps://string-db.org/network/2342.SOPEG_2351OriC-binding nucleoid-associated protein; Potential frameshift: common BLAST hit: gi|253688414|ref|YP_003017604.1| L-arabinose isomerase; L-arabinose isomerase.
rsxA protein networkhttps://string-db.org/network/2342.SOPEG_2353Ion-translocating oxidoreductase complex subunit A; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rsxB protein networkhttps://string-db.org/network/2342.SOPEG_2354Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferred [...]
rsxD protein networkhttps://string-db.org/network/2342.SOPEG_2356Ion-translocating oxidoreductase complex subunit D; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family [...]
rsxG protein networkhttps://string-db.org/network/2342.SOPEG_2357Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
rsxE protein networkhttps://string-db.org/network/2342.SOPEG_2358Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
nth protein networkhttps://string-db.org/network/2342.SOPEG_2359Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...]
tppB protein networkhttps://string-db.org/network/2342.SOPEG_2360Di/tripeptide permease DtpA; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily.
pdxY protein networkhttps://string-db.org/network/2342.SOPEG_2361Pyridoxamine kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.
tyrS protein networkhttps://string-db.org/network/2342.SOPEG_2362tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
pdxH protein networkhttps://string-db.org/network/2342.SOPEG_2363Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
mliC protein networkhttps://string-db.org/network/2342.SOPEG_2364Membrane-bound lysozyme inhibitor of c-type lysozyme; COG3895 Predicted periplasmic protein.
slyB protein networkhttps://string-db.org/network/2342.SOPEG_2366Outer membrane lipoprotein pcp; COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases; anhydro-N-acetylmuramic acid kinase.
slyA protein networkhttps://string-db.org/network/2342.SOPEG_2367Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family.
gloA protein networkhttps://string-db.org/network/2342.SOPEG_2368COG0346 Lactoylglutathione lyase and related lyases.
rnt protein networkhttps://string-db.org/network/2342.SOPEG_2369Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP [...]
grxD protein networkhttps://string-db.org/network/2342.SOPEG_2370Putative monothiol glutaredoxin GrlA; COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
purR protein networkhttps://string-db.org/network/2342.SOPEG_2372Purine nucleotide synthesis repressor; COG0791 Cell wall-associated hydrolases (invasion-associated proteins); NLP/P60 protein.
ribC protein networkhttps://string-db.org/network/2342.SOPEG_2374Riboflavin synthase subunit alpha; COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acyl phospholipid synthase.
pykF protein networkhttps://string-db.org/network/2342.SOPEG_2377tRNA-Val; COG0534 Na+-driven multidrug efflux pump; Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE family of MDR efflux pumps; Belongs to the pyruvate kinase family.
AHF74150.1 protein networkhttps://string-db.org/network/2342.SOPEG_2378Transposase ISSoEn1, IS5 ssgr IS903 family.
lpp protein networkhttps://string-db.org/network/2342.SOPEG_2379Major outer membrane lipoprotein; COG4238 Murein lipoprotein.
sufE protein networkhttps://string-db.org/network/2342.SOPEG_2384Cysteine desulfuration protein SufE; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essent [...]
sufS protein networkhttps://string-db.org/network/2342.SOPEG_2385Cysteine desulfurase SufS subfamily; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-c [...]
sufD protein networkhttps://string-db.org/network/2342.SOPEG_2386Iron-sulfur cluster assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
sufC protein networkhttps://string-db.org/network/2342.SOPEG_2387COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
sufB protein networkhttps://string-db.org/network/2342.SOPEG_2388Iron-sulfur cluster assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
sufA protein networkhttps://string-db.org/network/2342.SOPEG_2389Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
ydiK protein networkhttps://string-db.org/network/2342.SOPEG_2392Putative inner membrane protein; COG0247 Fe-S oxidoreductase; FAD linked oxidase domain-containing protein.
ppsR protein networkhttps://string-db.org/network/2342.SOPEG_2395Putative phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzin [...]
aroH protein networkhttps://string-db.org/network/2342.SOPEG_2398Helper of transposition ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74162.1 protein networkhttps://string-db.org/network/2342.SOPEG_2399Transposase ISSoEn3, IS21 family.
lplA protein networkhttps://string-db.org/network/2342.SOPEG_2401Lipoate--protein ligase; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-depe [...]
nlpC protein networkhttps://string-db.org/network/2342.SOPEG_2402Putative lipoprotein nlpC precursor; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
btuE protein networkhttps://string-db.org/network/2342.SOPEG_2404Glutathione peroxidase; COG4138 ABC-type cobalamin transport system, ATPase component; vitamin B12 ABC transporter ATP-binding protein; Belongs to the glutathione peroxidase family.
ihfA protein networkhttps://string-db.org/network/2342.SOPEG_2406Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tra [...]
pheT protein networkhttps://string-db.org/network/2342.SOPEG_2407phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
pheS protein networkhttps://string-db.org/network/2342.SOPEG_2408COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
rplT protein networkhttps://string-db.org/network/2342.SOPEG_2409LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing fun [...]
rpmI protein networkhttps://string-db.org/network/2342.SOPEG_2410COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
infC protein networkhttps://string-db.org/network/2342.SOPEG_2411Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
thrS protein networkhttps://string-db.org/network/2342.SOPEG_2412threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor en [...]
SOPEG_2414 protein networkhttps://string-db.org/network/2342.SOPEG_2414NAD-dependent epimerase/dehydratase; COG0110 Acetyltransferase (isoleucine patch superfamily); Putative outer membrane or secreted lipoprotein.
yniA protein networkhttps://string-db.org/network/2342.SOPEG_2419Putative phosphotransferase/kinase; COG3001 Fructosamine-3-kinase.
yniC protein networkhttps://string-db.org/network/2342.SOPEG_2422Pectin degradation protein; COG0637 Predicted phosphatase/phosphohexomutase; 2-deoxyglucose-6-phosphatase.
pntB2 protein networkhttps://string-db.org/network/2342.SOPEG_2432NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...]
pntA2 protein networkhttps://string-db.org/network/2342.SOPEG_2433NAD(P) transhydrogenase alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...]
AHF74181.1 protein networkhttps://string-db.org/network/2342.SOPEG_2434Transposase ISSoEn1, IS5 ssgr IS903 family.
ydgH2 protein networkhttps://string-db.org/network/2342.SOPEG_2435Putative exported protein precursor.
AHF74183.1 protein networkhttps://string-db.org/network/2342.SOPEG_2436Hypothetical protein.
rstA2 protein networkhttps://string-db.org/network/2342.SOPEG_2437DNA-binding transcriptional regulator RstA; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
ydbK2 protein networkhttps://string-db.org/network/2342.SOPEG_2449Putative secreted effector protein.
ttcA2 protein networkhttps://string-db.org/network/2342.SOPEG_2450tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the [...]
zntB protein networkhttps://string-db.org/network/2342.SOPEG_2451Zinc transporter; COG0598 Mg2+ and Co2+ transporters.
AHF74190.1 protein networkhttps://string-db.org/network/2342.SOPEG_2455C-type lectin precursor family member (2D393) / c-type lectin precursor family member (2D393).
AHF74191.1 protein networkhttps://string-db.org/network/2342.SOPEG_2456Putative DNA-binding protein (Roi); COG3646 Uncharacterized phage-encoded protein.
AHF74192.1 protein networkhttps://string-db.org/network/2342.SOPEG_2457Hypothetical protein.
SOPEG_2459 protein networkhttps://string-db.org/network/2342.SOPEG_2459Phage outer membrane protein; ISSoEn2, terminal inverted repeat.
SOPEG_2469 protein networkhttps://string-db.org/network/2342.SOPEG_2469Putative DNA-binding protein; Target site duplication generated by insertion of ISSoEn1.
AHF74198.1 protein networkhttps://string-db.org/network/2342.SOPEG_2470Transposase ISSoEn1, IS5 ssgr IS903 family.
kdsA protein networkhttps://string-db.org/network/2342.SOPEG_24772-dehydro-3-deoxyphosphooctonate aldolase; COG0659 Sulfate permease and related transporters (MFS superfamily); Putative sulfate permease; Belongs to the KdsA family.
prmC protein networkhttps://string-db.org/network/2342.SOPEG_2479Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; B [...]
prfA protein networkhttps://string-db.org/network/2342.SOPEG_2480Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
hemA protein networkhttps://string-db.org/network/2342.SOPEG_2481glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
lolB protein networkhttps://string-db.org/network/2342.SOPEG_2482Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
ispE protein networkhttps://string-db.org/network/2342.SOPEG_24834-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. I [...]
prs protein networkhttps://string-db.org/network/2342.SOPEG_2484Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
ychH protein networkhttps://string-db.org/network/2342.SOPEG_2485Putative membrane protein YchH.
pth protein networkhttps://string-db.org/network/2342.SOPEG_2486peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
ychF protein networkhttps://string-db.org/network/2342.SOPEG_2487GTP-binding and nucleic acid-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
SOPEG_2489 protein networkhttps://string-db.org/network/2342.SOPEG_2489Uncharacterized protein; ISSoEn2, terminal inverted repeat.
SOPEG_2491 protein networkhttps://string-db.org/network/2342.SOPEG_2491Cupin 2 conserved barrel domain protein; COG0500 SAM-dependent methyltransferases; putative methyltransferase.
SOPEG_2494 protein networkhttps://string-db.org/network/2342.SOPEG_2494Uncharacterized protein; COG1201 Lhr-like helicases; putative ATP-dependent helicase Lhr.
AHF74213.1 protein networkhttps://string-db.org/network/2342.SOPEG_2495COG3423 Predicted transcriptional regulator.
tpx protein networkhttps://string-db.org/network/2342.SOPEG_2504Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection again [...]
tyrR protein networkhttps://string-db.org/network/2342.SOPEG_2505COG3283 Transcriptional regulator of aromatic amino acids metabolism.
ycjF protein networkhttps://string-db.org/network/2342.SOPEG_2506ycjF; COG3768 Predicted membrane protein.
yciA protein networkhttps://string-db.org/network/2342.SOPEG_2512Acyl-CoA thioesterase YciA involved in membrane biogenesis; COG0810 Periplasmic protein TonB, links inner and outer membranes; Ferric siderophore transport system periplasmic binding protein TonB [...]
yciB protein networkhttps://string-db.org/network/2342.SOPEG_2513Intracellular septation protein IspA; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
yciC protein networkhttps://string-db.org/network/2342.SOPEG_2514Membrane protein YciC linked to IspA.
AHF74220.1 protein networkhttps://string-db.org/network/2342.SOPEG_2515Hypothetical protein; COG0727 Predicted Fe-S-cluster oxidoreductase.
ompW protein networkhttps://string-db.org/network/2342.SOPEG_2517Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74222.1 protein networkhttps://string-db.org/network/2342.SOPEG_2518Helper of transposition ISSoEn3, IS21 family.
AHF74223.1 protein networkhttps://string-db.org/network/2342.SOPEG_2519Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
trpA protein networkhttps://string-db.org/network/2342.SOPEG_2521Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
yciV protein networkhttps://string-db.org/network/2342.SOPEG_2527YciV; COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I.
yciO protein networkhttps://string-db.org/network/2342.SOPEG_2528yciO; COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family.
rluB protein networkhttps://string-db.org/network/2342.SOPEG_2529Ribosomal large subunit pseudouridine synthase B; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
sohB protein networkhttps://string-db.org/network/2342.SOPEG_2532Putative protease sohB; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative oxoacyl-(acyl carrier protein) reductase.
topA protein networkhttps://string-db.org/network/2342.SOPEG_2534DNA topoisomerase I subunit omega; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining [...]
cysB protein networkhttps://string-db.org/network/2342.SOPEG_2535COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
ribA protein networkhttps://string-db.org/network/2342.SOPEG_2538GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
pgpB protein networkhttps://string-db.org/network/2342.SOPEG_2539COG0671 Membrane-associated phospholipid phosphatase.
yciS protein networkhttps://string-db.org/network/2342.SOPEG_2540Inner membrane protein yciS; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
yciM protein networkhttps://string-db.org/network/2342.SOPEG_2541Heat shock (predicted periplasmic) protein YciM precursor; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating [...]
pyrF protein networkhttps://string-db.org/network/2342.SOPEG_2542Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
yciH protein networkhttps://string-db.org/network/2342.SOPEG_2544Rick_17kDa_Anti domain-containing protein; COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins; Translation initiation factor SUI1-related protein.
araD protein networkhttps://string-db.org/network/2342.SOPEG_2545COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
kdgT protein networkhttps://string-db.org/network/2342.SOPEG_25462-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hy [...]
rnb protein networkhttps://string-db.org/network/2342.SOPEG_2547Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
fabI protein networkhttps://string-db.org/network/2342.SOPEG_2551Enoyl-[acyl-carrier-protein] reductase [NADH]; COG0583 Transcriptional regulator; Hydrogen peroxide-inducible genes activator.
sapF protein networkhttps://string-db.org/network/2342.SOPEG_2552COG4167 ABC-type antimicrobial peptide transport system, ATPase component.
sapC protein networkhttps://string-db.org/network/2342.SOPEG_2554Potential frameshift: common BLAST hit: gi|85059489|ref|YP_455191.1| peptide ABC transporter ATP-binding component; antimicrobial peptide ABC transporter ATP-binding component.
sapB protein networkhttps://string-db.org/network/2342.SOPEG_2555COG4168 ABC-type antimicrobial peptide transport system, permease component.
hmuS protein networkhttps://string-db.org/network/2342.SOPEG_2560Putative prophage exported protein; ISSoEn2, terminal inverted repeat.
SOPEG_2562 protein networkhttps://string-db.org/network/2342.SOPEG_2562Uncharacterized protein; ISSoEn1, terminal inverted repeat.
AHF74248.1 protein networkhttps://string-db.org/network/2342.SOPEG_2563Putative phage transposase.
AHF74250.1 protein networkhttps://string-db.org/network/2342.SOPEG_2568Putative phage transposase.
eda protein networkhttps://string-db.org/network/2342.SOPEG_2571COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
zwf protein networkhttps://string-db.org/network/2342.SOPEG_2572Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
yebK protein networkhttps://string-db.org/network/2342.SOPEG_2573Phosphogluconate repressor HexR RpiR family; COG1737 Transcriptional regulators.
pykA protein networkhttps://string-db.org/network/2342.SOPEG_2574COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
otsA1 protein networkhttps://string-db.org/network/2342.SOPEG_2579CsbD domain-containing protein; COG0380 Trehalose-6-phosphate synthase; Alpha-trehalose-phosphate synthase [UDP-forming]; Belongs to the UPF0337 (CsbD) family.
putA protein networkhttps://string-db.org/network/2342.SOPEG_2583Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
grxB protein networkhttps://string-db.org/network/2342.SOPEG_2595Glutaredoxin 2; Potential frameshift: common BLAST hit: gi|291617008|ref|YP_003519750.1| YceB; predicted lipoprotein.
mdtH protein networkhttps://string-db.org/network/2342.SOPEG_2596MFS superfamily export protein YceL; COG0477 Permeases of the major facilitator superfamily.
rimJ protein networkhttps://string-db.org/network/2342.SOPEG_2597ribosomal-protein-S5-alanine N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
murJ protein networkhttps://string-db.org/network/2342.SOPEG_2600Probable lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
argS protein networkhttps://string-db.org/network/2342.SOPEG_2601COG0018 Arginyl-tRNA synthetase.
yecM protein networkhttps://string-db.org/network/2342.SOPEG_2602yecM; COG3102 Uncharacterized protein conserved in bacteria.
cutC protein networkhttps://string-db.org/network/2342.SOPEG_2604Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
cmoB protein networkhttps://string-db.org/network/2342.SOPEG_2605tRNA (5-methoxyuridine) 34 synthase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at positio [...]
yecN protein networkhttps://string-db.org/network/2342.SOPEG_2607Putative membrane protein; COG0500 SAM-dependent methyltransferases; hypothetical protein.
yecE protein networkhttps://string-db.org/network/2342.SOPEG_2608yecE.
yecD protein networkhttps://string-db.org/network/2342.SOPEG_2609Nicotinamidase/isochorismatase family protein; COG1335 Amidases related to nicotinamidase.
aspS protein networkhttps://string-db.org/network/2342.SOPEG_2610aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor [...]
nudB protein networkhttps://string-db.org/network/2342.SOPEG_2611Dihydroneopterin triphosphate pyrophosphohydolase type 2; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
yebC protein networkhttps://string-db.org/network/2342.SOPEG_2612yebC.
ruvC protein networkhttps://string-db.org/network/2342.SOPEG_2613Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the sam [...]
znuB protein networkhttps://string-db.org/network/2342.SOPEG_2616Zinc ABC transporter inner membrane permease protein ZnuB; Potential frameshift: common BLAST hit: gi|85059240|ref|YP_454942.1| Holliday junction DNA helicase RuvB; Holliday junction DNA helicase [...]
znuC protein networkhttps://string-db.org/network/2342.SOPEG_2617Zinc ABC transporter ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC tran [...]
znuA protein networkhttps://string-db.org/network/2342.SOPEG_2618Zinc ABC transporter periplasmic-binding protein ZnuA; COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
yebA protein networkhttps://string-db.org/network/2342.SOPEG_2619Cell wall endopeptidase family M23/M37; COG0739 Membrane proteins related to metalloendopeptidases.
lpxM protein networkhttps://string-db.org/network/2342.SOPEG_2620Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lip [...]
SOPEG_2622 protein networkhttps://string-db.org/network/2342.SOPEG_2622Uncharacterized protein; Potential frameshift: common BLAST hit: gi|94676651|ref|YP_588760.1| Mn2+/Fe2+ transporter; Mn2+/Fe2+ transporter.
dsrB protein networkhttps://string-db.org/network/2342.SOPEG_2629dsrB; Belongs to the DsrB family.
AHF74286.1 protein networkhttps://string-db.org/network/2342.SOPEG_2630Hypothetical protein.
AHF74287.1 protein networkhttps://string-db.org/network/2342.SOPEG_2631Mannosyl-3-phosphoglycerate phosphatase; COG3769 Predicted hydrolase (HAD superfamily).
SOPEG_2633 protein networkhttps://string-db.org/network/2342.SOPEG_2633AraC-family transcriptional regulatory protein; Putative cell wall biogenesis glycosyl transferase.
apbE protein networkhttps://string-db.org/network/2342.SOPEG_2637FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein [...]
AHF74291.1 protein networkhttps://string-db.org/network/2342.SOPEG_2638Hypothetical protein.
yqaE protein networkhttps://string-db.org/network/2342.SOPEG_2640Putative cytoplasmic protein; COG0401 Uncharacterized homolog of Blt101; hypothetical protein.
AHF74295.1 protein networkhttps://string-db.org/network/2342.SOPEG_2652Hypothetical protein; COG3306 Glycosyltransferase involved in LPS biosynthesis.
SOPEG_2654 protein networkhttps://string-db.org/network/2342.SOPEG_2654Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74297.1 protein networkhttps://string-db.org/network/2342.SOPEG_2655Transposase ISSoEn3, IS21 family.
mukB protein networkhttps://string-db.org/network/2342.SOPEG_2658Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. [...]
mukE protein networkhttps://string-db.org/network/2342.SOPEG_2659Chromosome partition protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from bot [...]
mukF protein networkhttps://string-db.org/network/2342.SOPEG_2660Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from bot [...]
ycbC protein networkhttps://string-db.org/network/2342.SOPEG_2662Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism; COG0500 SAM-dependent methyltransferases; putative S-adenosyl-L-methionine-dependent methyltransferase; puta [...]
kdsB protein networkhttps://string-db.org/network/2342.SOPEG_26633-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
ycaR protein networkhttps://string-db.org/network/2342.SOPEG_2664ycaR; Belongs to the UPF0434 family.
lpxK protein networkhttps://string-db.org/network/2342.SOPEG_2665Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...]
msbA protein networkhttps://string-db.org/network/2342.SOPEG_2666Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) [...]
SOPEG_2668 protein networkhttps://string-db.org/network/2342.SOPEG_2668Uncharacterized protein; COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily); ComEC family competence protein.
lpdA protein networkhttps://string-db.org/network/2342.SOPEG_2669COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
aceF protein networkhttps://string-db.org/network/2342.SOPEG_2670Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
aceE protein networkhttps://string-db.org/network/2342.SOPEG_2671Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
pdhR protein networkhttps://string-db.org/network/2342.SOPEG_2672Transcriptional repressor for pyruvate dehydrogenase complex; COG2186 Transcriptional regulators.
AHF74312.1 protein networkhttps://string-db.org/network/2342.SOPEG_2674Transposase ISSoEn3, IS21 family.
SOPEG_2678 protein networkhttps://string-db.org/network/2342.SOPEG_2678Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74314.1 protein networkhttps://string-db.org/network/2342.SOPEG_2679Transposase ISSoEn3, IS21 family.
SOPEG_2683 protein networkhttps://string-db.org/network/2342.SOPEG_2683Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
ampD protein networkhttps://string-db.org/network/2342.SOPEG_2685N-acetylmuramoyl-L-alanine amidase AmpD; Regulatory protein AmpE.
nadC protein networkhttps://string-db.org/network/2342.SOPEG_2686Quinolinate phosphoribosyltransferase; COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
ppdD protein networkhttps://string-db.org/network/2342.SOPEG_2687Putative prelipin peptidase dependent protein; COG4969 Tfp pilus assembly protein, major pilin PilA.
SOPEG_2689 protein networkhttps://string-db.org/network/2342.SOPEG_2689Secreted effector protein PipB2; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Type IV fimbrial assembly ATPase PilB.
metJ protein networkhttps://string-db.org/network/2342.SOPEG_2692Met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the [...]
metB protein networkhttps://string-db.org/network/2342.SOPEG_2693COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
ppc protein networkhttps://string-db.org/network/2342.SOPEG_2696Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
argE protein networkhttps://string-db.org/network/2342.SOPEG_2697COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
argC protein networkhttps://string-db.org/network/2342.SOPEG_2698N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
argB protein networkhttps://string-db.org/network/2342.SOPEG_2699Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate.
argH protein networkhttps://string-db.org/network/2342.SOPEG_2700COG0165 Argininosuccinate lyase.
AHF74328.1 protein networkhttps://string-db.org/network/2342.SOPEG_2701Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin.
oxyR protein networkhttps://string-db.org/network/2342.SOPEG_2702DNA-binding transcriptional dual regulator OxyR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
sthA protein networkhttps://string-db.org/network/2342.SOPEG_2703Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the [...]
fabR protein networkhttps://string-db.org/network/2342.SOPEG_2704DNA-binding transcriptional repressor FabR; Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the [...]
trmA protein networkhttps://string-db.org/network/2342.SOPEG_2706tRNA/tmRNA (uracil-C(5))-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U34 [...]
murI protein networkhttps://string-db.org/network/2342.SOPEG_2708Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
SOPEG_2713 protein networkhttps://string-db.org/network/2342.SOPEG_2713Uncharacterized protein; Potential frameshift: common BLAST hit: gi|134295406|ref|YP_001119141.1| bacteriophage Mu tail sheath family protein; COG4386 Mu-like prophage tail sheath protein gpL; ba [...]
AHF74336.1 protein networkhttps://string-db.org/network/2342.SOPEG_2714COG4387 Mu-like prophage protein gp36.
AHF74337.1 protein networkhttps://string-db.org/network/2342.SOPEG_2715Putative phage major capsid protein; COG4397 Mu-like prophage major head subunit gpT.
SOPEG_2721 protein networkhttps://string-db.org/network/2342.SOPEG_2721COG4383 Mu-like prophage protein gp29; putative phage portal protein.
AHF74339.1 protein networkhttps://string-db.org/network/2342.SOPEG_2722Transposase ISSoEn1, IS5 ssgr IS903 family.
dcd protein networkhttps://string-db.org/network/2342.SOPEG_2726dCTP deaminase; Catalyzes the deamination of dCTP to dUTP.
mrp protein networkhttps://string-db.org/network/2342.SOPEG_2729Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
metG protein networkhttps://string-db.org/network/2342.SOPEG_2730methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
SOPEG_2732 protein networkhttps://string-db.org/network/2342.SOPEG_2732Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74345.1 protein networkhttps://string-db.org/network/2342.SOPEG_2733Transposase ISSoEn3, IS21 family.
yohK protein networkhttps://string-db.org/network/2342.SOPEG_2737LrgA-associated membrane protein LrgB; COG1380 Putative effector of murein hydrolase LrgA.
cdd protein networkhttps://string-db.org/network/2342.SOPEG_2738Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
sanA protein networkhttps://string-db.org/network/2342.SOPEG_2740Vancomycin high temperature exclusion protein; COG0281 Malic enzyme; NAD-dependent malic enzyme.
galS protein networkhttps://string-db.org/network/2342.SOPEG_2747DNA-binding transcriptional regulator GalS; COG1879 ABC-type sugar transport system, periplasmic component; methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB.
yeiB protein networkhttps://string-db.org/network/2342.SOPEG_2752Putative inner membrane protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BasR.
folE protein networkhttps://string-db.org/network/2342.SOPEG_2753COG0302 GTP cyclohydrolase I.
yjiJ protein networkhttps://string-db.org/network/2342.SOPEG_2755Putative LysR-family transcriptional regulatory protein; Major facilitator family transporter; Belongs to the LysR transcriptional regulatory family.
SOPEG_2758 protein networkhttps://string-db.org/network/2342.SOPEG_2758TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins; COG0627 Predicted esterase; S-formylglutathione hydrolase.
SOPEG_2760 protein networkhttps://string-db.org/network/2342.SOPEG_2760Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74361.1 protein networkhttps://string-db.org/network/2342.SOPEG_2761Transposase ISSoEn3, IS21 family.
yeiE protein networkhttps://string-db.org/network/2342.SOPEG_2764Putative DNA-binding transcriptional regulator; COG0833 Amino acid transporters; lysine transporter; Belongs to the LysR transcriptional regulatory family.
nfo protein networkhttps://string-db.org/network/2342.SOPEG_2765Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-p [...]
fruK protein networkhttps://string-db.org/network/2342.SOPEG_2767Phosphofructokinase; COG1299 Phosphotransferase system, fructose-specific IIC component; PTS system fructose-specific transporter subunits IIBC; Belongs to the carbohydrate kinase PfkB family.
fruB protein networkhttps://string-db.org/network/2342.SOPEG_2768COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.
sotA protein networkhttps://string-db.org/network/2342.SOPEG_2769Sugar efflux transporter B; COG0477 Permeases of the major facilitator superfamily.
yeiQ protein networkhttps://string-db.org/network/2342.SOPEG_2771D-mannonate oxidoreductase; Potential frameshift: common BLAST hit: gi|271500900|ref|YP_003333925.1| elongation factor P-like protein YeiP; elongation factor P-like protein YeiP.
spr protein networkhttps://string-db.org/network/2342.SOPEG_2774Outer membrane lipoprotein; COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein.
yejB protein networkhttps://string-db.org/network/2342.SOPEG_2777Microcin C ABC transporter permease YejB; Potential frameshift: common BLAST hit: gi|294503276|ref|YP_003567338.1| putative substrate-binding transport protein; putative substrate-binding transpo [...]
yejF protein networkhttps://string-db.org/network/2342.SOPEG_2779Microcin C ABC transporter ATP-binding protein YejF; COG4239 ABC-type uncharacterized transport system, permease component; putative ABC transporter permease component; Belongs to the ABC transpo [...]
SOPEG_2785 protein networkhttps://string-db.org/network/2342.SOPEG_2785Transposase-like Mu; COG3423 Predicted transcriptional regulator; putative DNA-binding protein.
AHF74374.1 protein networkhttps://string-db.org/network/2342.SOPEG_2786Mu phage DNA transposition protein B; COG2842 Uncharacterized ATPase, putative transposase.
AHF74375.1 protein networkhttps://string-db.org/network/2342.SOPEG_2787Putative prophage exported protein.
SOPEG_2793 protein networkhttps://string-db.org/network/2342.SOPEG_2793Ferrous iron transport permease EfeU; COG0338 Site-specific DNA methylase; D12 class N6 adenine-specific DNA methyltransferase.
rsuA protein networkhttps://string-db.org/network/2342.SOPEG_2795Pseudouridine synthase; COG0477 Permeases of the major facilitator superfamily; bicyclomycin/multidrug efflux system; Belongs to the pseudouridine synthase RsuA family.
rplY protein networkhttps://string-db.org/network/2342.SOPEG_279750S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 fa [...]
ndpA protein networkhttps://string-db.org/network/2342.SOPEG_2801UPF0352 protein SOPEG_2801; COG3081 Nucleoid-associated protein; nucleoid-associated protein NdpA; Belongs to the UPF0352 family.
SOPEG_2803 protein networkhttps://string-db.org/network/2342.SOPEG_2803Phage antirepressor; Putative sulfatase.
yfaE protein networkhttps://string-db.org/network/2342.SOPEG_28082Fe-2S ferredoxin YfaE; ISSoEn2, terminal inverted repeat.
nrdB protein networkhttps://string-db.org/network/2342.SOPEG_2809COG0208 Ribonucleotide reductase, beta subunit.
nrdA protein networkhttps://string-db.org/network/2342.SOPEG_2810Ribonucleotide reductase of class Ia (aerobic) alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonu [...]
ubiG protein networkhttps://string-db.org/network/2342.SOPEG_28113-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG [...]
gyrA protein networkhttps://string-db.org/network/2342.SOPEG_2812DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
rcsB protein networkhttps://string-db.org/network/2342.SOPEG_2814DNA-binding capsular synthesis response regulator RcsB; COG0642 Signal transduction histidine kinase; Two-component sensor protein RcsC.
ompC protein networkhttps://string-db.org/network/2342.SOPEG_2818Outer membrane protein C.
AHF74389.1 protein networkhttps://string-db.org/network/2342.SOPEG_2819COG0625 Glutathione S-transferase.
SOPEG_2823 protein networkhttps://string-db.org/network/2342.SOPEG_2823Transposase ISSoEn3, IS21 family.
AHF74391.1 protein networkhttps://string-db.org/network/2342.SOPEG_2824Transposase ISSoEn2, IS256 family.
SOPEG_2826 protein networkhttps://string-db.org/network/2342.SOPEG_2826Major facilitator superfamily (MFS) transporter; COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein.
elaB protein networkhttps://string-db.org/network/2342.SOPEG_2834ElaB; COG1169 Isochorismate synthase; isochorismate synthase.
nuoN protein networkhttps://string-db.org/network/2342.SOPEG_2835NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...]
nuoM protein networkhttps://string-db.org/network/2342.SOPEG_2836COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
nuoL protein networkhttps://string-db.org/network/2342.SOPEG_2837COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
nuoK protein networkhttps://string-db.org/network/2342.SOPEG_2838NADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...]
nuoJ protein networkhttps://string-db.org/network/2342.SOPEG_2839NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton tr [...]
nuoI protein networkhttps://string-db.org/network/2342.SOPEG_2840NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
nuoH protein networkhttps://string-db.org/network/2342.SOPEG_2841NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...]
nuoG protein networkhttps://string-db.org/network/2342.SOPEG_2842NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...]
nuoF protein networkhttps://string-db.org/network/2342.SOPEG_2843NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
nuoE protein networkhttps://string-db.org/network/2342.SOPEG_2844COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
nuoC protein networkhttps://string-db.org/network/2342.SOPEG_2845Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron a [...]
nuoB protein networkhttps://string-db.org/network/2342.SOPEG_2846NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
nuoA protein networkhttps://string-db.org/network/2342.SOPEG_2847NADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...]
lrhA protein networkhttps://string-db.org/network/2342.SOPEG_2848DNA-binding transcriptional repressor LrhA; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
AHF74408.1 protein networkhttps://string-db.org/network/2342.SOPEG_2849Transposase ISSoEn1, IS5 ssgr IS903 family.
yfbR protein networkhttps://string-db.org/network/2342.SOPEG_28525'-deoxynucleotidase SOPEG_2852; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.
ackA protein networkhttps://string-db.org/network/2342.SOPEG_2855Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
pta protein networkhttps://string-db.org/network/2342.SOPEG_2856Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
yfcH protein networkhttps://string-db.org/network/2342.SOPEG_2860Putative sugar nucleotide epimerase; COG0625 Glutathione S-transferase; Glutathione S-transferase.
hisP protein networkhttps://string-db.org/network/2342.SOPEG_2861Histidine ABC transporter ATP-binding protein HisP; COG4598 ABC-type histidine transport system, ATPase component.
ubiX2 protein networkhttps://string-db.org/network/2342.SOPEG_2868Flavin prenyltransferase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The pre [...]
purF protein networkhttps://string-db.org/network/2342.SOPEG_2869Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine p [...]
cvpA protein networkhttps://string-db.org/network/2342.SOPEG_2870Colicin V production protein; COG1286 Uncharacterized membrane protein, required for colicin V production.
dedD protein networkhttps://string-db.org/network/2342.SOPEG_2871Cell division protein DedD; Non-essential cell division protein that could be required for efficient cell constriction.
folC protein networkhttps://string-db.org/network/2342.SOPEG_2872Dihydrofolate synthase / Folylpolyglutamate synthase; Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydroptero [...]
accD protein networkhttps://string-db.org/network/2342.SOPEG_2873acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and [...]
truA protein networkhttps://string-db.org/network/2342.SOPEG_2877tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
pdxB protein networkhttps://string-db.org/network/2342.SOPEG_2879Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
yfcJ protein networkhttps://string-db.org/network/2342.SOPEG_2881Uncharacterized MFS-type transporter SOPEG_2881; Potential frameshift: common BLAST hit: gi|85059600|ref|YP_455302.1| flagella biosynthesis regulator; flagella biosynthesis regulator.
fabB protein networkhttps://string-db.org/network/2342.SOPEG_28823-oxoacyl-[acyl-carrier-protein] synthase KASI; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
yfcL protein networkhttps://string-db.org/network/2342.SOPEG_2884YfcL; Potential frameshift: common BLAST hit: gi|251788978|ref|YP_003003699.1| 5-methylaminomethyl-2-thiouridine methyltransferase; 5-methylaminomethyl-2-thiouridine methyltransferase.
yfcA protein networkhttps://string-db.org/network/2342.SOPEG_2886Probable membrane transporter protein; COG3101 Uncharacterized protein conserved in bacteria; hypothetical protein.
aroC protein networkhttps://string-db.org/network/2342.SOPEG_2888Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
prmB protein networkhttps://string-db.org/network/2342.SOPEG_2889N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methylt [...]
yfcN protein networkhttps://string-db.org/network/2342.SOPEG_2890yfcN; COG2840 Uncharacterized protein conserved in bacteria; Belongs to the UPF0115 family.
sixA protein networkhttps://string-db.org/network/2342.SOPEG_2895Phosphohistidine phosphatase sixA; ISSoEn1, terminal inverted repeat.
mlaA protein networkhttps://string-db.org/network/2342.SOPEG_2897ABC transporter outer membrane lipoprotein; COG2853 Surface lipoprotein.
ccmH protein networkhttps://string-db.org/network/2342.SOPEG_2899Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase.
ccmG protein networkhttps://string-db.org/network/2342.SOPEG_2900Cytochrome c-type biogenesis protein CcmG/DsbE thiol:disulfide oxidoreductase; COG0526 Thiol-disulfide isomerase and thioredoxins.
ccmE protein networkhttps://string-db.org/network/2342.SOPEG_2902Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in [...]
ccmD protein networkhttps://string-db.org/network/2342.SOPEG_2903Cytochrome c-type biogenesis protein CcmD interacts with CcmCE; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
ccmC protein networkhttps://string-db.org/network/2342.SOPEG_2904Cytochrome c-type biogenesis protein CcmC putative heme lyase for CcmE; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC fa [...]
ccmA protein networkhttps://string-db.org/network/2342.SOPEG_2906Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to [...]
AHF74440.1 protein networkhttps://string-db.org/network/2342.SOPEG_2907Putative inner membrane protein; COG2116 Formate/nitrite family of transporters.
SOPEG_2913 protein networkhttps://string-db.org/network/2342.SOPEG_2913ISSoEn1, terminal inverted repeat.
AHF74444.1 protein networkhttps://string-db.org/network/2342.SOPEG_2914Transposase ISSoEn1, IS5 ssgr IS903 family.
SOPEG_2917 protein networkhttps://string-db.org/network/2342.SOPEG_2917Uncharacterized protein; Target site duplication generated by insertion of ISSoEn3.
sugE protein networkhttps://string-db.org/network/2342.SOPEG_2919GroEL supressor protein SugE; COG2076 Membrane transporters of cations and cationic drugs.
mntH protein networkhttps://string-db.org/network/2342.SOPEG_2924Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
nupC protein networkhttps://string-db.org/network/2342.SOPEG_2925Nucleoside transport protein NupC; COG1972 Nucleoside permease; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
gltX protein networkhttps://string-db.org/network/2342.SOPEG_2927glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
emrA protein networkhttps://string-db.org/network/2342.SOPEG_2933Membrane fusion component of tripartite multidrug resistance system; Potential frameshift: common BLAST hit: gi|152986287|ref|YP_001351216.1| drug efflux transporter; drug efflux transporter.
marR protein networkhttps://string-db.org/network/2342.SOPEG_2935MarR family transcriptional regulator; Potential frameshift: common BLAST hit: gi|152983649|ref|YP_001351214.1| outer membrane protein; outer membrane protein.
yjaB protein networkhttps://string-db.org/network/2342.SOPEG_2936COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
med protein networkhttps://string-db.org/network/2342.SOPEG_2937Basic membrane protein B precursor; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
yufP protein networkhttps://string-db.org/network/2342.SOPEG_2939ABC transporter, permease protein; Potential frameshift: common BLAST hit: gi|13475675|ref|NP_107242.1| ABC transporter, ATP-binding protein; ABC transporter, ATP-binding protein; Belongs to the [...]
yufQ protein networkhttps://string-db.org/network/2342.SOPEG_2940COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
AHF74459.1 protein networkhttps://string-db.org/network/2342.SOPEG_2941COG3530 Uncharacterized protein conserved in bacteria.
ligA protein networkhttps://string-db.org/network/2342.SOPEG_2942NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and [...]
zipA protein networkhttps://string-db.org/network/2342.SOPEG_2943Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also req [...]
AHF74462.1 protein networkhttps://string-db.org/network/2342.SOPEG_2944Transposase ISSoEn1, IS5 ssgr IS903 family.
cysZ protein networkhttps://string-db.org/network/2342.SOPEG_2945Putative sulfate transport protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis [...]
AHF74466.1 protein networkhttps://string-db.org/network/2342.SOPEG_2952Hypothetical protein.
AHF74467.1 protein networkhttps://string-db.org/network/2342.SOPEG_2953Hypothetical protein.
AHF74468.1 protein networkhttps://string-db.org/network/2342.SOPEG_2954Hypothetical protein.
SOPEG_2958 protein networkhttps://string-db.org/network/2342.SOPEG_2958Uncharacterized protein.
AHF74471.1 protein networkhttps://string-db.org/network/2342.SOPEG_2959Hypothetical protein.
AHF74474.1 protein networkhttps://string-db.org/network/2342.SOPEG_2965Hypothetical protein.
AHF74475.1 protein networkhttps://string-db.org/network/2342.SOPEG_2966Hypothetical protein.
SOPEG_2968 protein networkhttps://string-db.org/network/2342.SOPEG_2968Hypothetical phage protein.
AHF74477.1 protein networkhttps://string-db.org/network/2342.SOPEG_2969Hypothetical protein.
cysK protein networkhttps://string-db.org/network/2342.SOPEG_2972Cysteine synthase; ISSoEn2, terminal inverted repeat; Belongs to the cysteine synthase/cystathionine beta- synthase family.
ptsH protein networkhttps://string-db.org/network/2342.SOPEG_2973COG1925 Phosphotransferase system, HPr-related proteins.
ptsI protein networkhttps://string-db.org/network/2342.SOPEG_2974Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...]
crr protein networkhttps://string-db.org/network/2342.SOPEG_2975PTS system glucose-specific transporter subunit; COG2190 Phosphotransferase system IIA components.
AHF74483.1 protein networkhttps://string-db.org/network/2342.SOPEG_2979Two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
cysA protein networkhttps://string-db.org/network/2342.SOPEG_2982Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
cysW protein networkhttps://string-db.org/network/2342.SOPEG_2983Sulfate/thiosulfate transporter permease subunit; COG4208 ABC-type sulfate transport system, permease component.
cysU protein networkhttps://string-db.org/network/2342.SOPEG_2984Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system perme [...]
ypeA protein networkhttps://string-db.org/network/2342.SOPEG_2987Acetyltransferase SOPEG_2987; RpoE-regulated lipoprotein; Belongs to the acetyltransferase family. YpeA subfamily.
hemF protein networkhttps://string-db.org/network/2342.SOPEG_2988Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vin [...]
yaiI protein networkhttps://string-db.org/network/2342.SOPEG_2989yaiI; COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
talA protein networkhttps://string-db.org/network/2342.SOPEG_2990Transaldolase A; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
tktA protein networkhttps://string-db.org/network/2342.SOPEG_2991Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
SOPEG_2993 protein networkhttps://string-db.org/network/2342.SOPEG_2993Ankyrin repeat family protein; ISSoEn2, terminal inverted repeat.
AHF74493.1 protein networkhttps://string-db.org/network/2342.SOPEG_2994Transposase ISSoEn1, IS5 ssgr IS903 family.
yffB protein networkhttps://string-db.org/network/2342.SOPEG_3004Glutathione-dependent thiol reductase; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
dapE protein networkhttps://string-db.org/network/2342.SOPEG_3005N-succinyl-L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involve [...]
SOPEG_3008 protein networkhttps://string-db.org/network/2342.SOPEG_3008Helper of transposition ISSoEn3, IS21 family; Target site duplication generated by insertion of ISSoEn2.
AHF74499.1 protein networkhttps://string-db.org/network/2342.SOPEG_3009Transposase ISSoEn3, IS21 family.
tmcA protein networkhttps://string-db.org/network/2342.SOPEG_3012UPF0756 membrane protein SOPEG_3012; COG1444 Predicted P-loop ATPase fused to an acetyltransferase; putative acetyltransferase.
purC protein networkhttps://string-db.org/network/2342.SOPEG_3014Phosphoribosylaminoimidazole-succinocarboxamide synthase; COG2321 Predicted metalloprotease; hypothetical protein; Belongs to the SAICAR synthetase family.
bamC protein networkhttps://string-db.org/network/2342.SOPEG_3015Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
dapA protein networkhttps://string-db.org/network/2342.SOPEG_3016Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
gcvR protein networkhttps://string-db.org/network/2342.SOPEG_3017COG2716 Glycine cleavage system regulatory protein.
bcp protein networkhttps://string-db.org/network/2342.SOPEG_3018Thioredoxin-dependent thiol peroxidase; COG1225 Peroxiredoxin.
yfgC protein networkhttps://string-db.org/network/2342.SOPEG_3019Exported zinc metalloprotease YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer [...]
hda protein networkhttps://string-db.org/network/2342.SOPEG_3020DNA replication initiation factor; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to [...]
uraA protein networkhttps://string-db.org/network/2342.SOPEG_3021COG2233 Xanthine/uracil permeases.
upp protein networkhttps://string-db.org/network/2342.SOPEG_3022Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
purM protein networkhttps://string-db.org/network/2342.SOPEG_3023Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
purN protein networkhttps://string-db.org/network/2342.SOPEG_3024Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
pstB protein networkhttps://string-db.org/network/2342.SOPEG_3025Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC tr [...]
ppk protein networkhttps://string-db.org/network/2342.SOPEG_3028Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
SOPEG_3033 protein networkhttps://string-db.org/network/2342.SOPEG_30333-oxoacyl-[acyl-carrier protein] reductase; Potential frameshift: common BLAST hit: gi|85059716|ref|YP_455418.1| putative magnesium transport protein; putative magnesium transport protein.
ureG protein networkhttps://string-db.org/network/2342.SOPEG_3035Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
ureF protein networkhttps://string-db.org/network/2342.SOPEG_3036Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
ureE protein networkhttps://string-db.org/network/2342.SOPEG_3037Urease accessory protein UreF; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
baeR protein networkhttps://string-db.org/network/2342.SOPEG_3046Response regulator BaeR; COG0642 Signal transduction histidine kinase; Sensory histidine kinase BaeS.
SOPEG_3052 protein networkhttps://string-db.org/network/2342.SOPEG_3052ISSoEn3, terminal inverted repeat.
AHF74524.1 protein networkhttps://string-db.org/network/2342.SOPEG_3053Transposase ISSoEn3, IS21 family.
thiD protein networkhttps://string-db.org/network/2342.SOPEG_3054COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
thiM protein networkhttps://string-db.org/network/2342.SOPEG_3055Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
yenR protein networkhttps://string-db.org/network/2342.SOPEG_3056Quorum-sensing transcriptional activator YpeR; COG2771 DNA-binding HTH domain-containing proteins.
AHF74528.1 protein networkhttps://string-db.org/network/2342.SOPEG_3057COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
yeeD protein networkhttps://string-db.org/network/2342.SOPEG_3058yeeD; COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
yeeE protein networkhttps://string-db.org/network/2342.SOPEG_3060LysR family transcriptional regulator; COG2391 Predicted transporter component; hypothetical protein; Belongs to the LysR transcriptional regulatory family.
AHF74531.1 protein networkhttps://string-db.org/network/2342.SOPEG_3061Alanine racemase domain protein; COG3616 Predicted amino acid aldolase or racemase.
AHF74532.1 protein networkhttps://string-db.org/network/2342.SOPEG_3062C4-dicarboxylate anaerobic carrier; COG1288 Predicted membrane protein.
AHF74533.1 protein networkhttps://string-db.org/network/2342.SOPEG_3063Putative hydrolase; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
AHF74534.1 protein networkhttps://string-db.org/network/2342.SOPEG_3064Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
AHF74535.1 protein networkhttps://string-db.org/network/2342.SOPEG_3065Hypothetical protein; COG0730 Predicted permeases.
AHF74536.1 protein networkhttps://string-db.org/network/2342.SOPEG_3066COG3414 Phosphotransferase system, galactitol-specific IIB component.
SOPEG_3068 protein networkhttps://string-db.org/network/2342.SOPEG_3068Potential frameshift: common BLAST hit: gi|269118678|ref|YP_003306855.1| PTS system Galactitol-specific IIC component; TS system Galactitol-specific IIC component.
SOPEG_3070 protein networkhttps://string-db.org/network/2342.SOPEG_3070TetR family transcriptional regulator; Potential frameshift: common BLAST hit: gi|91780838|ref|YP_556045.1| putative short-chain dehydrogenase/reductase; putative short-chain dehydrogenase/reduct [...]
SOPEG_3074 protein networkhttps://string-db.org/network/2342.SOPEG_3074Putative transcriptional regulator; ISSoEn3, terminal inverted repeat.
AHF74540.1 protein networkhttps://string-db.org/network/2342.SOPEG_3075Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
AHF74541.1 protein networkhttps://string-db.org/network/2342.SOPEG_3076Putative glutathione S-transferase-related protein; COG0625 Glutathione S-transferase.
SOPEG_3079 protein networkhttps://string-db.org/network/2342.SOPEG_3079AraC family transcriptional regulator; COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily multidrug efflux transporter.
guaA protein networkhttps://string-db.org/network/2342.SOPEG_3080GMP synthase; Catalyzes the synthesis of GMP from XMP.
guaB protein networkhttps://string-db.org/network/2342.SOPEG_3081Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
xseA protein networkhttps://string-db.org/network/2342.SOPEG_3082Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...]
AHF74546.1 protein networkhttps://string-db.org/network/2342.SOPEG_3083COG0477 Permeases of the major facilitator superfamily.
AHF74547.1 protein networkhttps://string-db.org/network/2342.SOPEG_3084COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
mqo protein networkhttps://string-db.org/network/2342.SOPEG_3085Malate:quinone oxidoreductase; COG0579 Predicted dehydrogenase.
lacI protein networkhttps://string-db.org/network/2342.SOPEG_3087Lac repressor; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; Alcohol dehydrogenase GroES domain protein.
lacY2 protein networkhttps://string-db.org/network/2342.SOPEG_3090Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF74551.1 protein networkhttps://string-db.org/network/2342.SOPEG_3091COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
AHF74553.1 protein networkhttps://string-db.org/network/2342.SOPEG_3095Helper of transposition ISSoEn3, IS21 family.
AHF74554.1 protein networkhttps://string-db.org/network/2342.SOPEG_3096Transposase ISSoEn3, IS21 family.
yfgJ protein networkhttps://string-db.org/network/2342.SOPEG_3098YfgJ.
engA protein networkhttps://string-db.org/network/2342.SOPEG_3099GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) G [...]
bamB protein networkhttps://string-db.org/network/2342.SOPEG_3100Outer membrane biogenesis protein BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
yfgM protein networkhttps://string-db.org/network/2342.SOPEG_3101yfgM; COG2976 Uncharacterized protein conserved in bacteria.
hisS protein networkhttps://string-db.org/network/2342.SOPEG_3102COG0124 Histidyl-tRNA synthetase.
ispG protein networkhttps://string-db.org/network/2342.SOPEG_31031-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG [...]
rodZ protein networkhttps://string-db.org/network/2342.SOPEG_3104Transmembrane component of cytoskeleton; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis. Belongs to the RodZ family.
pilF protein networkhttps://string-db.org/network/2342.SOPEG_3105COG3063 Tfp pilus assembly protein PilF.
rlmN protein networkhttps://string-db.org/network/2342.SOPEG_3106Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial [...]
ndk protein networkhttps://string-db.org/network/2342.SOPEG_3107Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...]
SOPEG_3109 protein networkhttps://string-db.org/network/2342.SOPEG_3109Enhanced serine sensitivity protein SseB; COG2897 Rhodanese-related sulfurtransferase; Thiosulfate sulfurtransferase rhodanese.
iscS protein networkhttps://string-db.org/network/2342.SOPEG_3111Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of eleme [...]
suhB protein networkhttps://string-db.org/network/2342.SOPEG_3114Inositol-1-monophosphatase; Potential frameshift: common BLAST hit: gi|85059749|ref|YP_455451.1| putative RNA methyltransferase; putative RNA methyltransferase; Belongs to the inositol monophosph [...]
glyA protein networkhttps://string-db.org/network/2342.SOPEG_3118Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
glnB protein networkhttps://string-db.org/network/2342.SOPEG_3119COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
glrR protein networkhttps://string-db.org/network/2342.SOPEG_3120DNA-binding transcriptional activator GlrR; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
yfhG protein networkhttps://string-db.org/network/2342.SOPEG_3121yfhG.
purL protein networkhttps://string-db.org/network/2342.SOPEG_3123Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ri [...]
mltF protein networkhttps://string-db.org/network/2342.SOPEG_3124Membrane-bound lytic transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-a [...]
tadA protein networkhttps://string-db.org/network/2342.SOPEG_3125tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
yfhH protein networkhttps://string-db.org/network/2342.SOPEG_3129Putative DNA-binding transcriptional regulator; COG2103 Predicted sugar phosphate isomerase; N-acetylmuramic acid-6-phosphate etherase.
acpS protein networkhttps://string-db.org/network/2342.SOPEG_3134Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
pdxJ protein networkhttps://string-db.org/network/2342.SOPEG_3135Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amin [...]
era protein networkhttps://string-db.org/network/2342.SOPEG_3137GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cyc [...]
rnc protein networkhttps://string-db.org/network/2342.SOPEG_3138Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
lepB protein networkhttps://string-db.org/network/2342.SOPEG_3139COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
lepA protein networkhttps://string-db.org/network/2342.SOPEG_3140Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing [...]
AHF74582.1 protein networkhttps://string-db.org/network/2342.SOPEG_3141Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family.
AHF74585.1 protein networkhttps://string-db.org/network/2342.SOPEG_3145Transporter; COG0477 Permeases of the major facilitator superfamily.
pcp protein networkhttps://string-db.org/network/2342.SOPEG_3149Putative transcriptional regulator; COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase); pyrrolidone-carboxylate peptidase Pcp; Belongs to the LysR transcriptional regul [...]
AHF74587.1 protein networkhttps://string-db.org/network/2342.SOPEG_3150Hypothetical protein.
AHF74588.1 protein networkhttps://string-db.org/network/2342.SOPEG_3151Hypothetical protein; COG1451 Predicted metal-dependent hydrolase.
SOPEG_3154 protein networkhttps://string-db.org/network/2342.SOPEG_3154Short-chain dehydrogenase/reductase SDR; COG0477 Permeases of the major facilitator superfamily; metabolite transport protein.
AHF74590.1 protein networkhttps://string-db.org/network/2342.SOPEG_3155Hypothetical protein.
zntR protein networkhttps://string-db.org/network/2342.SOPEG_3156COG0789 Predicted transcriptional regulators.
SOPEG_3164 protein networkhttps://string-db.org/network/2342.SOPEG_3164Transcriptional regulator, MarR family protein; COG2203 FOG: GAF domain; diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
AHF74595.1 protein networkhttps://string-db.org/network/2342.SOPEG_3165Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
AHF74596.1 protein networkhttps://string-db.org/network/2342.SOPEG_3166HlyD family secretion protein; COG1566 Multidrug resistance efflux pump.
SOPEG_3177 protein networkhttps://string-db.org/network/2342.SOPEG_3177D12 class N6 adenine-specific DNA methyltransferase; COG0673 Predicted dehydrogenases and related proteins; oxidoreductase domain protein.
aroL2 protein networkhttps://string-db.org/network/2342.SOPEG_3182Shikimate kinase 2; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
yaiA2 protein networkhttps://string-db.org/network/2342.SOPEG_3183yaiA2.
AHF74604.1 protein networkhttps://string-db.org/network/2342.SOPEG_3184COG1414 Transcriptional regulator.
yaiE2 protein networkhttps://string-db.org/network/2342.SOPEG_3185Cytoplasmic protein YaiE; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymid [...]
sbcD2 protein networkhttps://string-db.org/network/2342.SOPEG_3194Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3' [...]
secF1 protein networkhttps://string-db.org/network/2342.SOPEG_3196Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
yajC1 protein networkhttps://string-db.org/network/2342.SOPEG_3198Sec translocon accessory complex subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins [...]
acpH1 protein networkhttps://string-db.org/network/2342.SOPEG_3201Acyl carrier protein phosphodiesterase; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine:tRNA ribosyltransferase-isomerase.
arnB protein networkhttps://string-db.org/network/2342.SOPEG_3207UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabino [...]
arnC protein networkhttps://string-db.org/network/2342.SOPEG_3208Undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attache [...]
arnA protein networkhttps://string-db.org/network/2342.SOPEG_3209Bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcU [...]
arnD protein networkhttps://string-db.org/network/2342.SOPEG_32104-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphou [...]
arnT2 protein networkhttps://string-db.org/network/2342.SOPEG_32114-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipi [...]
arnE protein networkhttps://string-db.org/network/2342.SOPEG_32124-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the peri [...]
arnF protein networkhttps://string-db.org/network/2342.SOPEG_32134-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the peri [...]
SOPEG_3215 protein networkhttps://string-db.org/network/2342.SOPEG_3215ISSoEn2, terminal inverted repeat.
rseC protein networkhttps://string-db.org/network/2342.SOPEG_3216SoxR and Sigma-E factor regulatory protein RseC; COG3086 Positive regulator of sigma E activity.
rseB protein networkhttps://string-db.org/network/2342.SOPEG_3217Sigma factor RpoE negative regulatory protein RseB; COG3026 Negative regulator of sigma E activity.
rseA protein networkhttps://string-db.org/network/2342.SOPEG_3218Sigma factor RpoE negative regulatory protein RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti [...]
nadB protein networkhttps://string-db.org/network/2342.SOPEG_3220L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
yfiC protein networkhttps://string-db.org/network/2342.SOPEG_3223Putative O-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
srmB protein networkhttps://string-db.org/network/2342.SOPEG_3224ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; [...]
grcA protein networkhttps://string-db.org/network/2342.SOPEG_3225Pyruvate formate-lyase; Acts as a radical domain for damaged PFL and possibly other radical proteins.
ung protein networkhttps://string-db.org/network/2342.SOPEG_3226uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
grpE protein networkhttps://string-db.org/network/2342.SOPEG_3227Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is [...]
ppnK protein networkhttps://string-db.org/network/2342.SOPEG_3228Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosph [...]
recN protein networkhttps://string-db.org/network/2342.SOPEG_3231DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
AHF74635.1 protein networkhttps://string-db.org/network/2342.SOPEG_3235COG3501 Uncharacterized protein conserved in bacteria.
AHF74636.1 protein networkhttps://string-db.org/network/2342.SOPEG_3236Hypothetical protein.
AHF74637.1 protein networkhttps://string-db.org/network/2342.SOPEG_3237Putative phage protein.
bamE protein networkhttps://string-db.org/network/2342.SOPEG_3247Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
ratA protein networkhttps://string-db.org/network/2342.SOPEG_3248ratA; COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.
ratB protein networkhttps://string-db.org/network/2342.SOPEG_3249COG2867 Oligoketide cyclase/lipid transport protein.
smpB protein networkhttps://string-db.org/network/2342.SOPEG_3250tmRNA-binding protein SmpB; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosom [...]
AHF74646.1 protein networkhttps://string-db.org/network/2342.SOPEG_3252Saccharopine dehydrogenase related protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
AHF74649.1 protein networkhttps://string-db.org/network/2342.SOPEG_3257Hypothetical protein.
uxuR protein networkhttps://string-db.org/network/2342.SOPEG_3258DNA-binding transcriptional repressor UxuR; COG2186 Transcriptional regulators.
pheC protein networkhttps://string-db.org/network/2342.SOPEG_3261COG1312 D-mannonate dehydratase; mannonate dehydratase.
SOPEG_3264 protein networkhttps://string-db.org/network/2342.SOPEG_3264HAD-superfamily hydrolase, subfamily IA, variant 1; Target site duplication generated by insertion of ISSoEn2.
SOPEG_3266 protein networkhttps://string-db.org/network/2342.SOPEG_3266Transposase ISSoEn1, IS5 ssgr IS903 family; ISSoEn1, terminal inverted repeat.
AHF74654.1 protein networkhttps://string-db.org/network/2342.SOPEG_3267Transposase ISSoEn2, IS256 family.
SOPEG_3270 protein networkhttps://string-db.org/network/2342.SOPEG_3270Mu phage DNA transposition protein B; Potential frameshift: common BLAST hit: gi|170022477|ref|YP_001718982.1| transposase; mu transposase.
AHF74656.1 protein networkhttps://string-db.org/network/2342.SOPEG_3271Transposase ISSoEn1, IS5 ssgr IS903 family.
SOPEG_3273 protein networkhttps://string-db.org/network/2342.SOPEG_3273Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF74658.1 protein networkhttps://string-db.org/network/2342.SOPEG_3274Helper of transposition ISSoEn3, IS21 family.
hicB protein networkhttps://string-db.org/network/2342.SOPEG_3276Antitoxin of the hicA hicB toxin-antitoxin system; ISSoEn2, terminal inverted repeat.
hicA protein networkhttps://string-db.org/network/2342.SOPEG_3278ISSoEn1, terminal inverted repeat.
yajC2 protein networkhttps://string-db.org/network/2342.SOPEG_3287Sec translocon accessory complex subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins [...]
SOPEG_3307 protein networkhttps://string-db.org/network/2342.SOPEG_3307Oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide ABC transporter ATP-binding protein; Belongs to t [...]
yicC protein networkhttps://string-db.org/network/2342.SOPEG_3309YicC.
rph protein networkhttps://string-db.org/network/2342.SOPEG_3310Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucl [...]
yplA protein networkhttps://string-db.org/network/2342.SOPEG_3322ISSoEn1, terminal inverted repeat.
ydeP2 protein networkhttps://string-db.org/network/2342.SOPEG_3324XRE family transcriptional regulator; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Putative formate dehydrogenase oxidoreductase protein.
ttr protein networkhttps://string-db.org/network/2342.SOPEG_3325GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
SOPEG_3328 protein networkhttps://string-db.org/network/2342.SOPEG_3328AraC family transcriptional regulator; COG0388 Predicted amidohydrolase; 5-aminopentanamidase.
SOPEG_3336 protein networkhttps://string-db.org/network/2342.SOPEG_3336MarR family transcriptional regulator; COG0346 Lactoylglutathione lyase and related lyases; Lactoylglutathione lyase.
gmk protein networkhttps://string-db.org/network/2342.SOPEG_3337Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
rpoZ protein networkhttps://string-db.org/network/2342.SOPEG_3338DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alp [...]
xanP protein networkhttps://string-db.org/network/2342.SOPEG_3341Xanthine permease; Potential frameshift: common BLAST hit: gi|85060202|ref|YP_455904.1| ATP-dependent DNA helicase RecG; COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG.
yicH protein networkhttps://string-db.org/network/2342.SOPEG_3342yicH.
yiiD protein networkhttps://string-db.org/network/2342.SOPEG_3343GNAT family acetyltransferase YiiD potentially involved in tRNA processing; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
dtd protein networkhttps://string-db.org/network/2342.SOPEG_3344D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
rbn protein networkhttps://string-db.org/network/2342.SOPEG_3345Ribonuclease BN; COG1295 Predicted membrane protein.
yihX protein networkhttps://string-db.org/network/2342.SOPEG_3346Putative haloacid dehalogenase-like hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
fucP protein networkhttps://string-db.org/network/2342.SOPEG_3347COG0738 Fucose permease.
deoR protein networkhttps://string-db.org/network/2342.SOPEG_3348Deoxyribose operon repressor DeoR family; COG1349 Transcriptional regulators of sugar metabolism.
typA protein networkhttps://string-db.org/network/2342.SOPEG_3349Putative GTP-binding elongation factor; COG1217 Predicted membrane GTPase involved in stress response.
AHF74691.1 protein networkhttps://string-db.org/network/2342.SOPEG_3350Transposase ISSoEn1, IS5 ssgr IS903 family.
glnA protein networkhttps://string-db.org/network/2342.SOPEG_3351COG0174 Glutamine synthetase.
glnG protein networkhttps://string-db.org/network/2342.SOPEG_3353DNA-binding transcriptional regulator NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limita [...]
AHF74694.1 protein networkhttps://string-db.org/network/2342.SOPEG_3354Hypothetical protein.
engB protein networkhttps://string-db.org/network/2342.SOPEG_3357Probable GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. E [...]
polA protein networkhttps://string-db.org/network/2342.SOPEG_3358DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
dsbA protein networkhttps://string-db.org/network/2342.SOPEG_3359COG0526 Thiol-disulfide isomerase and thioredoxins.
gmhB protein networkhttps://string-db.org/network/2342.SOPEG_336616S ribosomal RNA; ISSoEn2, terminal inverted repeat.
metN protein networkhttps://string-db.org/network/2342.SOPEG_3367Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
metI protein networkhttps://string-db.org/network/2342.SOPEG_3368Methionine ABC transporter permease protein; COG2011 ABC-type metal ion transport system, permease component.
metQ protein networkhttps://string-db.org/network/2342.SOPEG_3369Methionine ABC transporter substrate-binding protein; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
proS protein networkhttps://string-db.org/network/2342.SOPEG_3372Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA( [...]
AHF74703.1 protein networkhttps://string-db.org/network/2342.SOPEG_3373Transposase ISSoEn3, IS21 family.
AHF74704.1 protein networkhttps://string-db.org/network/2342.SOPEG_3374Helper of transposition ISSoEn3, IS21 family.
tilS protein networkhttps://string-db.org/network/2342.SOPEG_3380tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is c [...]
yaeR protein networkhttps://string-db.org/network/2342.SOPEG_3381Hypothetical protein YaeR with similarity to glyoxylase family; COG0346 Lactoylglutathione lyase and related lyases.
ldcC protein networkhttps://string-db.org/network/2342.SOPEG_3382COG1982 Arginine/lysine/ornithine decarboxylases.
accA protein networkhttps://string-db.org/network/2342.SOPEG_3383acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carr [...]
dnaE protein networkhttps://string-db.org/network/2342.SOPEG_3384COG0587 DNA polymerase III, alpha subunit.
rnhB protein networkhttps://string-db.org/network/2342.SOPEG_3385Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
lpxB protein networkhttps://string-db.org/network/2342.SOPEG_3386lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
lpxA protein networkhttps://string-db.org/network/2342.SOPEG_3387Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
fabZ protein networkhttps://string-db.org/network/2342.SOPEG_3388(3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated be [...]
lpxD protein networkhttps://string-db.org/network/2342.SOPEG_3389UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved [...]
hlpA protein networkhttps://string-db.org/network/2342.SOPEG_3390COG2825 Outer membrane protein; Belongs to the skp family.
bamA protein networkhttps://string-db.org/network/2342.SOPEG_3391Outer membrane protein assembly factor YaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Cons [...]
rseP protein networkhttps://string-db.org/network/2342.SOPEG_3392Membrane-associated zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
cdsA protein networkhttps://string-db.org/network/2342.SOPEG_3393COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
ispU protein networkhttps://string-db.org/network/2342.SOPEG_3394Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,3 [...]
dxr protein networkhttps://string-db.org/network/2342.SOPEG_33951-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP).
frr protein networkhttps://string-db.org/network/2342.SOPEG_3396Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/2342.SOPEG_3397Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
tsf protein networkhttps://string-db.org/network/2342.SOPEG_3398Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
rpsB protein networkhttps://string-db.org/network/2342.SOPEG_3399SSU ribosomal protein S2p (SAe); COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
map protein networkhttps://string-db.org/network/2342.SOPEG_3400Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharg [...]
dapD protein networkhttps://string-db.org/network/2342.SOPEG_34022,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; COG2844 UTP:GlnB (protein PII) uridylyltransferase; [Protein-PII] uridylyltransferase; Belongs to the transferase hexapeptide r [...]
yaeH protein networkhttps://string-db.org/network/2342.SOPEG_3403yaeH; Belongs to the UPF0325 family.
yqcA protein networkhttps://string-db.org/network/2342.SOPEG_3404Putative flavoprotein YqcA (clustered with tRNA pseudouridine synthase C); COG0716 Flavodoxins.
truC protein networkhttps://string-db.org/network/2342.SOPEG_3405COG0564 Pseudouridylate synthases, 23S RNA-specific.
yqcC protein networkhttps://string-db.org/network/2342.SOPEG_3406Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C); COG3098 Uncharacterized protein conserved in bacteria.
syd protein networkhttps://string-db.org/network/2342.SOPEG_3407SecY interacting protein Syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the [...]
ygdH protein networkhttps://string-db.org/network/2342.SOPEG_3409Decarboxylase family protein; COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase.
ygdG protein networkhttps://string-db.org/network/2342.SOPEG_3410Exonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase [...]
SOPEG_3414 protein networkhttps://string-db.org/network/2342.SOPEG_3414Helper of transposition ISSoEn3, IS21 family; Target site duplication generated by insertion of ISSoEn2.
AHF74737.1 protein networkhttps://string-db.org/network/2342.SOPEG_3415Transposase ISSoEn3, IS21 family.
gcvA protein networkhttps://string-db.org/network/2342.SOPEG_3419DNA-binding transcriptional activator GcvA; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
ygdI protein networkhttps://string-db.org/network/2342.SOPEG_3420ygdI.
mltA protein networkhttps://string-db.org/network/2342.SOPEG_3426tRNA-Met; Murein transglycosylase A; COG2821 Membrane-bound lytic murein transglycosylase; potential frameshift: common BLAST hit: gi|242240419|ref|YP_002988600.1| murein transglycosylase A.
abgB1 protein networkhttps://string-db.org/network/2342.SOPEG_3429Amino acid ABC transporter periplasmic amino acid-binding protein; COG2234 Predicted aminopeptidases; peptidase M28.
amiC protein networkhttps://string-db.org/network/2342.SOPEG_3430COG0860 N-acetylmuramoyl-L-alanine amidase.
argA protein networkhttps://string-db.org/network/2342.SOPEG_3431N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
recD protein networkhttps://string-db.org/network/2342.SOPEG_3432Exonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bid [...]
recB protein networkhttps://string-db.org/network/2342.SOPEG_3433Exonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidi [...]
ptrA protein networkhttps://string-db.org/network/2342.SOPEG_3434Protease III precursor; COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; Belongs to the peptidase M16 family.
recC protein networkhttps://string-db.org/network/2342.SOPEG_3435Exonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bid [...]
thyA protein networkhttps://string-db.org/network/2342.SOPEG_3439Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
lgt protein networkhttps://string-db.org/network/2342.SOPEG_3440Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
ptsP protein networkhttps://string-db.org/network/2342.SOPEG_3441Phosphocarrier protein kinase/phosphorylase2C nitrogen regulation associated; COG3605 Signal transduction protein containing GAF and PtsI domains; Belongs to the PEP-utilizing enzyme family.
nudH protein networkhttps://string-db.org/network/2342.SOPEG_3442Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more [...]
AHF74753.1 protein networkhttps://string-db.org/network/2342.SOPEG_3443Transposase ISSoEn1, IS5 ssgr IS903 family.
AHF74754.1 protein networkhttps://string-db.org/network/2342.SOPEG_3444Transposase ISSoEn4, ISL3 family.
mutH protein networkhttps://string-db.org/network/2342.SOPEG_3445DNA mismatch repair endonuclease MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.
ygdQ protein networkhttps://string-db.org/network/2342.SOPEG_3446COG0861 Membrane protein TerC, possibly involved in tellurium resistance.
ygdR protein networkhttps://string-db.org/network/2342.SOPEG_3447Putative lipoprotein.
tas protein networkhttps://string-db.org/network/2342.SOPEG_3448COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
lplT protein networkhttps://string-db.org/network/2342.SOPEG_3449Lysophospholipid transporter LplT; COG0477 Permeases of the major facilitator superfamily.
SOPEG_3457 protein networkhttps://string-db.org/network/2342.SOPEG_3457LysR family transcriptional regulator YnfL; Target site duplication generated by insertion of ISSoEn3; Belongs to the LysR transcriptional regulatory family.
lysA protein networkhttps://string-db.org/network/2342.SOPEG_3459Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
ydhP protein networkhttps://string-db.org/network/2342.SOPEG_3461Putative sugar transport protein; COG0583 Transcriptional regulator; DNA-binding transcriptional regulator LysR.
AHF74764.1 protein networkhttps://string-db.org/network/2342.SOPEG_3462Hypothetical protein.
AHF74765.1 protein networkhttps://string-db.org/network/2342.SOPEG_3463COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
AHF74767.1 protein networkhttps://string-db.org/network/2342.SOPEG_3467Transposase ISSoEn2, IS256 family.
AHF74768.1 protein networkhttps://string-db.org/network/2342.SOPEG_3468Transposase ISSoEn1, IS5 ssgr IS903 family.
SOPEG_3470 protein networkhttps://string-db.org/network/2342.SOPEG_3470COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; ABC transporter ATP-binding protein.
SOPEG_3472 protein networkhttps://string-db.org/network/2342.SOPEG_3472Spermidine/putrescine ABC transporter periplasmic substrate-binding protein; COG0006 Xaa-Pro aminopeptidase; hypothetical protein.
AHF74771.1 protein networkhttps://string-db.org/network/2342.SOPEG_3473COG0518 GMP synthase - Glutamine amidotransferase domain.
AHF74772.1 protein networkhttps://string-db.org/network/2342.SOPEG_3474COG1802 Transcriptional regulators.
AHF74778.1 protein networkhttps://string-db.org/network/2342.SOPEG_3493COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
gntK protein networkhttps://string-db.org/network/2342.SOPEG_3498COG3265 Gluconate kinase.
gabP protein networkhttps://string-db.org/network/2342.SOPEG_3504Gamma-aminobutyrate transport protein.
gdhA protein networkhttps://string-db.org/network/2342.SOPEG_3505COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
treA2 protein networkhttps://string-db.org/network/2342.SOPEG_3515Uncharacterized protein.
AHF74787.1 protein networkhttps://string-db.org/network/2342.SOPEG_3516Hypothetical protein.
AHF74788.1 protein networkhttps://string-db.org/network/2342.SOPEG_3517Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
parA protein networkhttps://string-db.org/network/2342.SOPEG_3523Putative plasmid partition protein A; ISSoEn2, terminal inverted repeat.
SOPEG_3529 protein networkhttps://string-db.org/network/2342.SOPEG_3529Amino acid ABC transporter periplasmic amino acid-binding protein; ISSoEn2, terminal inverted repeat; Belongs to the bacterial solute-binding protein 3 family.
AHF74792.1 protein networkhttps://string-db.org/network/2342.SOPEG_3530COG1278 Cold shock proteins.
yhdX protein networkhttps://string-db.org/network/2342.SOPEG_3535Amino-acid transporter subunit membrane component of ABC superfamily protein; Transposase ISSoEn2, IS256 family.
yhdZ protein networkhttps://string-db.org/network/2342.SOPEG_3537COG0765 ABC-type amino acid transport system, permease component; ABC transporter permease.
purD protein networkhttps://string-db.org/network/2342.SOPEG_354516S ribosomal RNA; Potential frameshift: common BLAST hit: gi|85058121|ref|YP_453823.1| phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase / IMP cyclohydrolase; Belon [...]
hupA protein networkhttps://string-db.org/network/2342.SOPEG_3547Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
yjaG protein networkhttps://string-db.org/network/2342.SOPEG_3548yjaG; COG3068 Uncharacterized protein conserved in bacteria.
nfi protein networkhttps://string-db.org/network/2342.SOPEG_3549Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the int [...]
nudC protein networkhttps://string-db.org/network/2342.SOPEG_3551NADH pyrophosphatase; Potential frameshift: common BLAST hit: gi|85058116|ref|YP_453818.1| uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase; Belongs to the Nudix hydrolase family. N [...]
thiC protein networkhttps://string-db.org/network/2342.SOPEG_3553Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methioni [...]
thiE protein networkhttps://string-db.org/network/2342.SOPEG_3554Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
thiS protein networkhttps://string-db.org/network/2342.SOPEG_3556Sulfur carrier protein ThiS; Potential frameshift: common BLAST hit: gi|261819574|ref|YP_003257680.1| UBA/THIF-type NAD/FAD binding protein; sulfur carrier protein ThiS adenylyltransferase.
SOPEG_3568 protein networkhttps://string-db.org/network/2342.SOPEG_3568PBSX family phage portal protein; Potential frameshift: common BLAST hit: gi|51596194|ref|YP_070385.1| gpP phage P2 terminase; gpP phage P2 terminase.
SOPEG_3572 protein networkhttps://string-db.org/network/2342.SOPEG_3572Uncharacterized protein; ISNCY ssgr ISPlu15 family.
AHF74807.1 protein networkhttps://string-db.org/network/2342.SOPEG_3573Hypothetical protein.
SOPEG_3575 protein networkhttps://string-db.org/network/2342.SOPEG_3575Putative DNA adenine methylase; Potential frameshift: common BLAST hit: gi|146313140|ref|YP_001178214.1| bacteriophage replication gene A; bacteriophage replication gene A.
AHF74809.1 protein networkhttps://string-db.org/network/2342.SOPEG_3576Putative ribonuclease (polynucleotidyl transferase) from prophage.
AHF74811.1 protein networkhttps://string-db.org/network/2342.SOPEG_3578Transposase ISSoEn2, IS256 family; Required for the transposition of the insertion element.
AHF74812.1 protein networkhttps://string-db.org/network/2342.SOPEG_3579Helper of transposition ISSoEn3, IS21 family.
AHF74813.1 protein networkhttps://string-db.org/network/2342.SOPEG_3580Transposase ISSoEn3, IS21 family.
SOPEG_3583 protein networkhttps://string-db.org/network/2342.SOPEG_3583COG5283 Phage-related tail protein; phage tail-like protein.
AHF74816.1 protein networkhttps://string-db.org/network/2342.SOPEG_3584Late control gene D protein; COG3500 Phage protein D.
AHF74817.1 protein networkhttps://string-db.org/network/2342.SOPEG_3585Putative phage late gene regulator.
rpoC protein networkhttps://string-db.org/network/2342.SOPEG_3586DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/2342.SOPEG_3587DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplL protein networkhttps://string-db.org/network/2342.SOPEG_3588LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs t [...]
rplJ protein networkhttps://string-db.org/network/2342.SOPEG_3589LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosoma [...]
rplA protein networkhttps://string-db.org/network/2342.SOPEG_3590LSU ribosomal protein L1p (L10Ae); Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplK protein networkhttps://string-db.org/network/2342.SOPEG_3591LSU ribosomal protein L11p (L12e); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/2342.SOPEG_3592Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the [...]
secE protein networkhttps://string-db.org/network/2342.SOPEG_3593Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Be [...]
tufB protein networkhttps://string-db.org/network/2342.SOPEG_3594Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
coaA protein networkhttps://string-db.org/network/2342.SOPEG_3599COG1072 Panthothenate kinase.
birA protein networkhttps://string-db.org/network/2342.SOPEG_3601Biotin-protein ligase / Biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the Bi [...]
murB protein networkhttps://string-db.org/network/2342.SOPEG_3602UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
hemG protein networkhttps://string-db.org/network/2342.SOPEG_360716S ribosomal RNA; ISSoEn2, terminal inverted repeat.
trkH protein networkhttps://string-db.org/network/2342.SOPEG_3608Potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
yigZ protein networkhttps://string-db.org/network/2342.SOPEG_3609yigZ.
fre protein networkhttps://string-db.org/network/2342.SOPEG_3611NAD(P)H-flavin reductase; COG0006 Xaa-Pro aminopeptidase; proline dipeptidase.
ubiD protein networkhttps://string-db.org/network/2342.SOPEG_36123-polyprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
rfaH protein networkhttps://string-db.org/network/2342.SOPEG_3613Transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component [...]
tatC protein networkhttps://string-db.org/network/2342.SOPEG_3614Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine moti [...]
tatB protein networkhttps://string-db.org/network/2342.SOPEG_3615Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in th [...]
tatA protein networkhttps://string-db.org/network/2342.SOPEG_3616Twin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their sign [...]
ubiB protein networkhttps://string-db.org/network/2342.SOPEG_3617Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
yigP protein networkhttps://string-db.org/network/2342.SOPEG_3618yigP; COG3165 Uncharacterized protein conserved in bacteria.
ubiE protein networkhttps://string-db.org/network/2342.SOPEG_3619Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-m [...]
rmuC protein networkhttps://string-db.org/network/2342.SOPEG_3620DNA recombination protein RmuC; COG1322 Uncharacterized protein conserved in bacteria.
AHF74844.1 protein networkhttps://string-db.org/network/2342.SOPEG_3621Putative membrane protein; COG0586 Uncharacterized membrane-associated protein.
udp protein networkhttps://string-db.org/network/2342.SOPEG_3622Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as c [...]
ysgA protein networkhttps://string-db.org/network/2342.SOPEG_3623Putative carboxymethylenebutenolidase; COG0412 Dienelactone hydrolase and related enzymes.
metR protein networkhttps://string-db.org/network/2342.SOPEG_3626Uncharacterized protein; COG0583 Transcriptional regulator; MetR DNA-binding transcriptional dual regulator.
AHF74848.1 protein networkhttps://string-db.org/network/2342.SOPEG_3627Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
ggt protein networkhttps://string-db.org/network/2342.SOPEG_3628Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
yhhK protein networkhttps://string-db.org/network/2342.SOPEG_3636Putative acetyltransferase; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
rpoH protein networkhttps://string-db.org/network/2342.SOPEG_3637RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is invol [...]
ftsX protein networkhttps://string-db.org/network/2342.SOPEG_3638Cell division ABC transporter subunit FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
ftsE protein networkhttps://string-db.org/network/2342.SOPEG_3639Cell division transporter ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
ftsY protein networkhttps://string-db.org/network/2342.SOPEG_3640Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the compl [...]
rsmD protein networkhttps://string-db.org/network/2342.SOPEG_364116S rRNA m(2)G966-methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.
yhhM protein networkhttps://string-db.org/network/2342.SOPEG_3643YhhM; COG3776 Predicted membrane protein; Putative membrane protein.
yhhN protein networkhttps://string-db.org/network/2342.SOPEG_3644yhhN; COG3714 Predicted membrane protein.
tusA protein networkhttps://string-db.org/network/2342.SOPEG_3645tRNA 5-methylaminomethyl-2-thiouridine synthase TusA; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis o [...]
lexA protein networkhttps://string-db.org/network/2342.SOPEG_3653SOS-response repressor and protease LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CT [...]
plsB protein networkhttps://string-db.org/network/2342.SOPEG_3655COG2937 Glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
ubiA protein networkhttps://string-db.org/network/2342.SOPEG_36564-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubi [...]
ubiC protein networkhttps://string-db.org/network/2342.SOPEG_3660Polysaccharide synthesis-related protein; Target site duplication generated by insertion of ISSoEn2.
pgi protein networkhttps://string-db.org/network/2342.SOPEG_3663COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
yjbB protein networkhttps://string-db.org/network/2342.SOPEG_3666ABC transporter-related protein; COG1283 Na+/phosphate symporter; potential frameshift: common BLAST hit: gi|85060126|ref|YP_455828.1| putative transport protein; putative transport protein; Belo [...]
SOPEG_3668 protein networkhttps://string-db.org/network/2342.SOPEG_3668Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II; putative spermidine/putrescine ABC transporte [...]
SOPEG_3670 protein networkhttps://string-db.org/network/2342.SOPEG_3670COG1524 Uncharacterized proteins of the AP superfamily; hypothetical protein.
SOPEG_3675 protein networkhttps://string-db.org/network/2342.SOPEG_3675Oxidoreductase; ISSoEn2, terminal inverted repeat.
fis protein networkhttps://string-db.org/network/2342.SOPEG_3685DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.
dusB protein networkhttps://string-db.org/network/2342.SOPEG_3686tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines [...]
panF protein networkhttps://string-db.org/network/2342.SOPEG_3688Sodium/panthothenate symporter; COG2264 Ribosomal protein L11 methylase; ribosomal protein L11 methyltransferase; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
yhdT protein networkhttps://string-db.org/network/2342.SOPEG_3689yhdT; COG3924 Predicted membrane protein.
accC protein networkhttps://string-db.org/network/2342.SOPEG_3691Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarbox [...]
accB protein networkhttps://string-db.org/network/2342.SOPEG_3692Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the c [...]
aroQ protein networkhttps://string-db.org/network/2342.SOPEG_36933-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
msrQ protein networkhttps://string-db.org/network/2342.SOPEG_3694Putative sulfite oxidase subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thu [...]
mreB protein networkhttps://string-db.org/network/2342.SOPEG_3697Rod shape-determining protein MreB; COG2199 FOG: GGDEF domain; regulatory protein CsrD.
mreC protein networkhttps://string-db.org/network/2342.SOPEG_3698COG1792 Cell shape-determining protein.
mreD protein networkhttps://string-db.org/network/2342.SOPEG_3699Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
rng protein networkhttps://string-db.org/network/2342.SOPEG_3701Cytoplasmic axial filament protein CafA and Ribonuclease G; COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Septum formation protein Maf.
aaeR protein networkhttps://string-db.org/network/2342.SOPEG_3704Putative transcriptional regulator LYSR-type; COG0312 Predicted Zn-dependent proteases and their inactivated homologs; TldD protein part of proposed TldE/TldD proteolytic complex; Belongs to the [...]
aaeX protein networkhttps://string-db.org/network/2342.SOPEG_3705Efflux system membrane protein.
aaeA protein networkhttps://string-db.org/network/2342.SOPEG_3706P-hydroxybenzoic acid efflux subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
aaeB protein networkhttps://string-db.org/network/2342.SOPEG_3707P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels [...]
yjgA protein networkhttps://string-db.org/network/2342.SOPEG_3710yjgA; COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family.
AHF74896.1 protein networkhttps://string-db.org/network/2342.SOPEG_37132-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
SOPEG_3715 protein networkhttps://string-db.org/network/2342.SOPEG_3715Putative inner membrane protein; Potential frameshift: common BLAST hit: gi|300715948|ref|YP_003740751.1| Six-hairpin glycosidase-like protein; Six-hairpin glycosidase-like protein.
gldA protein networkhttps://string-db.org/network/2342.SOPEG_3716COG0371 Glycerol dehydrogenase and related enzymes.
SOPEG_3718 protein networkhttps://string-db.org/network/2342.SOPEG_3718Phosphinothricin acetyltransferase; Potential frameshift: common BLAST hit: gi|50122041|ref|YP_051208.1| putative mechanosensitive ion channel protein; putative mechanosensitive ion channel prote [...]
mdoD protein networkhttps://string-db.org/network/2342.SOPEG_3726Regulatory protein; Potential frameshift: common BLAST hit: gi|62182133|ref|YP_218550.1| PQQ repeat-containing protein; PQQ repeat-containing protein.
AHF74901.1 protein networkhttps://string-db.org/network/2342.SOPEG_3727Helper of transposition ISSoEn3, IS21 family.
AHF74902.1 protein networkhttps://string-db.org/network/2342.SOPEG_3728Transposase ISSoEn3, IS21 family.
ybhN protein networkhttps://string-db.org/network/2342.SOPEG_3731Putative antibiotic biosynthesis protein; COG0392 Predicted integral membrane protein; hypothetical protein.
AHF74905.1 protein networkhttps://string-db.org/network/2342.SOPEG_3733Hypothetical protein.
ycfQ protein networkhttps://string-db.org/network/2342.SOPEG_3734COG1309 Transcriptional regulator.
hilA protein networkhttps://string-db.org/network/2342.SOPEG_3739Invasion protein regulator; Potential frameshift: common BLAST hit: gi|85060071|ref|YP_455773.1| putative efflux transport protein; putative efflux transport protein.
invF protein networkhttps://string-db.org/network/2342.SOPEG_3740Putative type III secretion apparatus transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
invA protein networkhttps://string-db.org/network/2342.SOPEG_3742COG1450 Type II secretory pathway, component PulD; type III secretion system outer membrane pore InvG.
invB protein networkhttps://string-db.org/network/2342.SOPEG_3743Type III secretion system chaperone SpaK.
invC protein networkhttps://string-db.org/network/2342.SOPEG_3744COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
spaM protein networkhttps://string-db.org/network/2342.SOPEG_3745Type III secretion apparatus SpaM.
spaO protein networkhttps://string-db.org/network/2342.SOPEG_3747Putative type III secretion apparatus.
spaQ protein networkhttps://string-db.org/network/2342.SOPEG_3749Type III secretion apparatus SpaQ; COG4790 Type III secretory pathway, component EscR; type III secretion system protein SpaP.
spaR protein networkhttps://string-db.org/network/2342.SOPEG_3750Type III secretion apparatus SpaR; COG4791 Type III secretory pathway, component EscT.
spaS protein networkhttps://string-db.org/network/2342.SOPEG_3752ISSoEn1, terminal inverted repeat.
sicA protein networkhttps://string-db.org/network/2342.SOPEG_3753Putative type III secretion chaperone; COG0457 FOG: TPR repeat.
AHF74918.1 protein networkhttps://string-db.org/network/2342.SOPEG_3754Transposase ISSoEn1, IS5 ssgr IS903 family.
prgH protein networkhttps://string-db.org/network/2342.SOPEG_3756Type III secretion system needle complex protein PrgH.
orgA protein networkhttps://string-db.org/network/2342.SOPEG_3759Oxygen-regulated invasion protein OrgA; COG4669 Type III secretory pathway, lipoprotein EscJ; Type III secretion bridge between inner and outermembrane lipoprotein.
orgB protein networkhttps://string-db.org/network/2342.SOPEG_3760Oxygen-regulated invasion protein OrgB.
AHF74922.1 protein networkhttps://string-db.org/network/2342.SOPEG_3761Hypothetical protein.
yajD protein networkhttps://string-db.org/network/2342.SOPEG_3762yajD.
SOPEG_3769 protein networkhttps://string-db.org/network/2342.SOPEG_3769OmpR/PhoB-type domain-containing protein; Target site duplication generated by insertion of ISSoEn3.
AHF74926.1 protein networkhttps://string-db.org/network/2342.SOPEG_3770Hypothetical protein.
arsC protein networkhttps://string-db.org/network/2342.SOPEG_3771COG1393 Arsenate reductase and related proteins, glutaredoxin family.
flhD2 protein networkhttps://string-db.org/network/2342.SOPEG_3773Flagellar transcriptional regulator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by bind [...]
motB2 protein networkhttps://string-db.org/network/2342.SOPEG_3777COG1291 Flagellar motor component; Flagellar motor rotation protein MotA.
cheA protein networkhttps://string-db.org/network/2342.SOPEG_3778COG0643 Chemotaxis protein histidine kinase and related kinases.
cheW protein networkhttps://string-db.org/network/2342.SOPEG_3779Positive regulator of CheA protein activity (CheW); COG0835 Chemotaxis signal transduction protein.
cheY protein networkhttps://string-db.org/network/2342.SOPEG_3785Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; [...]
flgM2 protein networkhttps://string-db.org/network/2342.SOPEG_3791Anti-sigma factor for FliA (Sigma 28); Flagellar biosynthesis protein FlgN.
flgA2 protein networkhttps://string-db.org/network/2342.SOPEG_3792Flagellar biosynthesis; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a [...]
flgB protein networkhttps://string-db.org/network/2342.SOPEG_3793Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
flgC2 protein networkhttps://string-db.org/network/2342.SOPEG_3794COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
flgD2 protein networkhttps://string-db.org/network/2342.SOPEG_3795Flagellar biosynthesis, initiation of hook assembly; Required for flagellar hook formation. May act as a scaffolding protein.
flgK2 protein networkhttps://string-db.org/network/2342.SOPEG_3801COG1256 Flagellar hook-associated protein.
flgL2 protein networkhttps://string-db.org/network/2342.SOPEG_3802Flagellar biosynthesis; COG1344 Flagellin and related hook-associated proteins.
fliN2 protein networkhttps://string-db.org/network/2342.SOPEG_3809Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex inte [...]
fliM2 protein networkhttps://string-db.org/network/2342.SOPEG_3810Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex int [...]
fliL2 protein networkhttps://string-db.org/network/2342.SOPEG_3811Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
tkt protein networkhttps://string-db.org/network/2342.SOPEG_3827HTH gntR-type domain-containing protein; Potential frameshift: common BLAST hit: gi|110644160|ref|YP_671890.1| transketolase; COG0021 Transketolase; transketolase.
SOPEG_3839 protein networkhttps://string-db.org/network/2342.SOPEG_3839Transcriptional regulator, DeoR family protein; Target site duplication generated by insertion of ISSoEn2.
SOPEG_3842 protein networkhttps://string-db.org/network/2342.SOPEG_3842Putative permease component of ABC transporter; Potential frameshift: common BLAST hit: gi|241113697|ref|YP_002973532.1| glycoside hydrolase family 4; glycoside hydrolase family 4.
SOPEG_3844 protein networkhttps://string-db.org/network/2342.SOPEG_3844Extracellular solute-binding protein family 1; COG1175 ABC-type sugar transport systems, permease components; binding-protein-dependent transport systems inner membrane component.
speC protein networkhttps://string-db.org/network/2342.SOPEG_3852Ornithine decarboxylase; ISSoEn2, terminal inverted repeat.
mltC protein networkhttps://string-db.org/network/2342.SOPEG_3853Membrane-bound lytic murein transglycosylase C precursor; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
yggX protein networkhttps://string-db.org/network/2342.SOPEG_3854Protein that protects iron-sulfur proteins against oxidative damage; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repai [...]
mutY protein networkhttps://string-db.org/network/2342.SOPEG_3855A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
trmB protein networkhttps://string-db.org/network/2342.SOPEG_3856tRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB f [...]
rdgB protein networkhttps://string-db.org/network/2342.SOPEG_3861dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleot [...]
yggT protein networkhttps://string-db.org/network/2342.SOPEG_3863Integral membrane protein YggT involved in response to extracytoplasmic stress (Osmotic shock).
proC protein networkhttps://string-db.org/network/2342.SOPEG_3864Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
yggS protein networkhttps://string-db.org/network/2342.SOPEG_3865yggS; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.
pilT protein networkhttps://string-db.org/network/2342.SOPEG_3866Twitching motility protein; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT.
AHF74966.1 protein networkhttps://string-db.org/network/2342.SOPEG_3867Hypothetical protein.
rhaT protein networkhttps://string-db.org/network/2342.SOPEG_3868L-rhamnose-proton symporter.
rhaR protein networkhttps://string-db.org/network/2342.SOPEG_3869L-rhamnose operon transcriptional activator RhaR; COG2207 AraC-type DNA-binding domain-containing proteins.
rhaS protein networkhttps://string-db.org/network/2342.SOPEG_3870L-rhamnose operon regulatory protein RhaS; COG2207 AraC-type DNA-binding domain-containing proteins.
yqgF protein networkhttps://string-db.org/network/2342.SOPEG_3875Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
yqgE protein networkhttps://string-db.org/network/2342.SOPEG_3876yqgE; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
gshB protein networkhttps://string-db.org/network/2342.SOPEG_3877COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
rsmE protein networkhttps://string-db.org/network/2342.SOPEG_3878Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subuni [...]
endA protein networkhttps://string-db.org/network/2342.SOPEG_3879COG2356 Endonuclease I.
yggI protein networkhttps://string-db.org/network/2342.SOPEG_3880yggI; COG3091 Uncharacterized protein conserved in bacteria; Belongs to the SprT family.
AHF74976.1 protein networkhttps://string-db.org/network/2342.SOPEG_3881Transposase ISSoEn4, ISL3 family.
metK protein networkhttps://string-db.org/network/2342.SOPEG_3883S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formati [...]
pgk protein networkhttps://string-db.org/network/2342.SOPEG_3887Phosphoglycerate kinase; lysine-N-methylase; Belongs to the phosphoglycerate kinase family.
fba protein networkhttps://string-db.org/network/2342.SOPEG_3888Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphat [...]
rpiA protein networkhttps://string-db.org/network/2342.SOPEG_3893Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
serA protein networkhttps://string-db.org/network/2342.SOPEG_3894COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
ygfA protein networkhttps://string-db.org/network/2342.SOPEG_3895COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
zapA protein networkhttps://string-db.org/network/2342.SOPEG_3896Cell division factor ZapA, localizes to the cytokinetic ring; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofil [...]
pepP protein networkhttps://string-db.org/network/2342.SOPEG_3898Xaa-Pro aminopeptidase; COG3079 Uncharacterized protein conserved in bacteria; hypothetical protein.
ubiH protein networkhttps://string-db.org/network/2342.SOPEG_3899Ubiquinone biosynthesis monooxygenase UbiH/COQ6, 2-octaprenyl-6-methoxyphenol hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
visC protein networkhttps://string-db.org/network/2342.SOPEG_39002-octaprenyl-3-methyl-6-methoxy-1 4-benzoquinol hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
gcvT protein networkhttps://string-db.org/network/2342.SOPEG_3901Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine.
gcvH protein networkhttps://string-db.org/network/2342.SOPEG_3902Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
gcvP protein networkhttps://string-db.org/network/2342.SOPEG_3904HD_domain domain-containing protein; Potential frameshift: common BLAST hit: gi|85059978|ref|YP_455680.1| glycine dehydrogenase; COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-t [...]
yqfA protein networkhttps://string-db.org/network/2342.SOPEG_3905COG1272 Predicted membrane protein, hemolysin III homolog.
ygfZ protein networkhttps://string-db.org/network/2342.SOPEG_3906Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is pr [...]
ygfY protein networkhttps://string-db.org/network/2342.SOPEG_3907ygfY.
fldB protein networkhttps://string-db.org/network/2342.SOPEG_3909Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
xerD protein networkhttps://string-db.org/network/2342.SOPEG_3910Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific D [...]
dsbC protein networkhttps://string-db.org/network/2342.SOPEG_3911Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the proce [...]
recJ protein networkhttps://string-db.org/network/2342.SOPEG_3912Single-stranded-DNA-specific exonuclease RecJ; COG0608 Single-stranded DNA-specific exonuclease.
lysS protein networkhttps://string-db.org/network/2342.SOPEG_3914Lysine--tRNA ligase; COG1186 Protein chain release factor B; Programmed translational frameshift; Peptide chain release factor 2; Belongs to the class-II aminoacyl-tRNA synthetase family.
abgB2 protein networkhttps://string-db.org/network/2342.SOPEG_3916Polar amino acid ABC transporter, inner membrane subunit; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; aminobenzoyl-glutamate utilization family protein.
SOPEG_3918 protein networkhttps://string-db.org/network/2342.SOPEG_3918Extracellular solute-binding protein family 3; Potential frameshift: common BLAST hit: gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit; polar amino acid [...]
AHF75000.1 protein networkhttps://string-db.org/network/2342.SOPEG_3919Transposase ISSoEn1, IS5 ssgr IS903 family.
rbsK protein networkhttps://string-db.org/network/2342.SOPEG_3921Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histi [...]
rbsD protein networkhttps://string-db.org/network/2342.SOPEG_3922COG1869 ABC-type ribose transport system, auxiliary component.
SOPEG_3931 protein networkhttps://string-db.org/network/2342.SOPEG_3931Transposase ISSoEn3, IS21 family; ISSoEn3, terminal inverted repeat.
AHF75004.1 protein networkhttps://string-db.org/network/2342.SOPEG_3932Helper of transposition ISSoEn3, IS21 family.
AHF75005.1 protein networkhttps://string-db.org/network/2342.SOPEG_3933Transposase ISSoEn2, IS256 family.
rlmG2 protein networkhttps://string-db.org/network/2342.SOPEG_3939GFO_IDH_MocA domain-containing protein; COG2813 16S RNA G1207 methylase RsmC; 23S rRNA (guanine-N-2-) -methyltransferase rlmG.
AHF75008.1 protein networkhttps://string-db.org/network/2342.SOPEG_3940COG0518 GMP synthase - Glutamine amidotransferase domain.
ygjV2 protein networkhttps://string-db.org/network/2342.SOPEG_3942COG0861 Membrane protein TerC, possibly involved in tellurium resistance; putative transport protein.
uxaB2 protein networkhttps://string-db.org/network/2342.SOPEG_3944COG2721 Altronate dehydratase; D-altronate dehydratase.
folD protein networkhttps://string-db.org/network/2342.SOPEG_3955tRNA-Arg; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
ybcJ protein networkhttps://string-db.org/network/2342.SOPEG_3956ybcJ.
cysS protein networkhttps://string-db.org/network/2342.SOPEG_3957COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
ppiB protein networkhttps://string-db.org/network/2342.SOPEG_3958Peptidyl-prolyl cis-trans isomerase B (rotamase B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs [...]
lpxH protein networkhttps://string-db.org/network/2342.SOPEG_3959UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water [...]
AHF75019.1 protein networkhttps://string-db.org/network/2342.SOPEG_3960COG4405 Uncharacterized protein conserved in bacteria.
purE protein networkhttps://string-db.org/network/2342.SOPEG_3961Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
purK protein networkhttps://string-db.org/network/2342.SOPEG_3962Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide ( [...]
icd protein networkhttps://string-db.org/network/2342.SOPEG_3963COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
ybbO protein networkhttps://string-db.org/network/2342.SOPEG_3967Putative NAD(P)-dependent oxidoreductase EC-YbbO; COG2755 Lysophospholipase L1 and related esterases; Lysophospholipase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
ybbN protein networkhttps://string-db.org/network/2342.SOPEG_3968COG3118 Thioredoxin domain-containing protein.
AHF75025.1 protein networkhttps://string-db.org/network/2342.SOPEG_3969Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
ybaP protein networkhttps://string-db.org/network/2342.SOPEG_3971YbaP; Potential frameshift: common BLAST hit: gi|261822463|ref|YP_003260569.1| copper exporting ATPase; copper exporting ATPase.
ybaL protein networkhttps://string-db.org/network/2342.SOPEG_3973Putative cation:proton antiport protein; COG2606 Uncharacterized conserved protein; Cys-tRNAPro and Cys-tRNACys deacylase; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter [...]
hemH protein networkhttps://string-db.org/network/2342.SOPEG_3974Ferrochelatase protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
adk protein networkhttps://string-db.org/network/2342.SOPEG_3975Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
htpG protein networkhttps://string-db.org/network/2342.SOPEG_3976Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity.
recR protein networkhttps://string-db.org/network/2342.SOPEG_3977Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
ybaB protein networkhttps://string-db.org/network/2342.SOPEG_3978YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
dnaX protein networkhttps://string-db.org/network/2342.SOPEG_3979COG2812 DNA polymerase III, gamma/tau subunits.
apt protein networkhttps://string-db.org/network/2342.SOPEG_3980Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
priC protein networkhttps://string-db.org/network/2342.SOPEG_3981COG3923 Primosomal replication protein N''.
ybaM protein networkhttps://string-db.org/network/2342.SOPEG_3982ybaM.
acrR protein networkhttps://string-db.org/network/2342.SOPEG_3983Transcription repressor of multidrug efflux pump acrAB operon TetR (AcrR) family; COG1309 Transcriptional regulator.
acrA protein networkhttps://string-db.org/network/2342.SOPEG_3984Acriflavin efflux protein AcrA; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
acrB2 protein networkhttps://string-db.org/network/2342.SOPEG_3985RND efflux system inner membrane transporter component AcrB; COG0841 Cation/multidrug efflux pump.
rpmE2 protein networkhttps://string-db.org/network/2342.SOPEG_3986COG0254 Ribosomal protein L31.
rpmJ2 protein networkhttps://string-db.org/network/2342.SOPEG_3987COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
tomB protein networkhttps://string-db.org/network/2342.SOPEG_3988Hha toxicity attenuator.
hha protein networkhttps://string-db.org/network/2342.SOPEG_3989Hemolysin expression modulating protein.
mdlB protein networkhttps://string-db.org/network/2342.SOPEG_3997Putative multidrug transporter membraneATP-binding components; COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 2.
mdlA protein networkhttps://string-db.org/network/2342.SOPEG_3998Putative multidrug transporter membraneATP-binding components; COG1132 ABC-type multidrug transport system, ATPase and permease components.
AHF75046.1 protein networkhttps://string-db.org/network/2342.SOPEG_3999Putative cysteine synthase/cystathionine beta-synthase; COG0031 Cysteine synthase.
ppiD protein networkhttps://string-db.org/network/2342.SOPEG_4002Peptidylprolyl isomerase; COG1555 DNA uptake protein and related DNA-binding proteins; competence protein ComEA helix-hairpin-helix repeat protein.
hupB protein networkhttps://string-db.org/network/2342.SOPEG_4003Transcriptional regulator HU subunit beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental cond [...]
lon protein networkhttps://string-db.org/network/2342.SOPEG_4004ATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Requir [...]
clpX protein networkhttps://string-db.org/network/2342.SOPEG_4005ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in th [...]
clpP protein networkhttps://string-db.org/network/2342.SOPEG_4006ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degrada [...]
tig protein networkhttps://string-db.org/network/2342.SOPEG_4007Cell division trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomer [...]
bolA protein networkhttps://string-db.org/network/2342.SOPEG_4008Cell division protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
yajG protein networkhttps://string-db.org/network/2342.SOPEG_4009Putative lipoprotein YajG precursor; COG3056 Uncharacterized lipoprotein.
cyoC protein networkhttps://string-db.org/network/2342.SOPEG_4012COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Cytochrome O ubiquinol oxidase subunit I.
cyoD protein networkhttps://string-db.org/network/2342.SOPEG_4013COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4.
cyoE protein networkhttps://string-db.org/network/2342.SOPEG_4014Heme O synthase protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl sid [...]
yajR protein networkhttps://string-db.org/network/2342.SOPEG_4015Putative transport protein; COG0477 Permeases of the major facilitator superfamily.
yajQ protein networkhttps://string-db.org/network/2342.SOPEG_4016Putative nucleotide-binding protein; COG1666 Uncharacterized protein conserved in bacteria; Belongs to the UPF0234 family.
thiI protein networkhttps://string-db.org/network/2342.SOPEG_4019tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the tran [...]
xseB protein networkhttps://string-db.org/network/2342.SOPEG_4020Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...]
ispA protein networkhttps://string-db.org/network/2342.SOPEG_4021Geranyltranstransferase (farnesyldiphosphate synthase); COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
dxs protein networkhttps://string-db.org/network/2342.SOPEG_40221-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
pgpA protein networkhttps://string-db.org/network/2342.SOPEG_4024Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
thiL protein networkhttps://string-db.org/network/2342.SOPEG_4025Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thi [...]
nusB protein networkhttps://string-db.org/network/2342.SOPEG_4026Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequ [...]
ribE protein networkhttps://string-db.org/network/2342.SOPEG_40276,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
ribD protein networkhttps://string-db.org/network/2342.SOPEG_4028Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphat [...]
pitA protein networkhttps://string-db.org/network/2342.SOPEG_4033Phosphate transporter.
uspB protein networkhttps://string-db.org/network/2342.SOPEG_4034Universal stress protein UspB.
uspA protein networkhttps://string-db.org/network/2342.SOPEG_4035COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
prlC protein networkhttps://string-db.org/network/2342.SOPEG_4040COG0500 SAM-dependent methyltransferases; putative methyltransferase.
AHF75074.1 protein networkhttps://string-db.org/network/2342.SOPEG_4041DoxX family protein; COG2259 Predicted membrane protein.
AHF75075.1 protein networkhttps://string-db.org/network/2342.SOPEG_4042COG0031 Cysteine synthase.
marC protein networkhttps://string-db.org/network/2342.SOPEG_4043Multiple antibiotic resistance protein MarC; COG2095 Multiple antibiotic transporter.
codB3 protein networkhttps://string-db.org/network/2342.SOPEG_4044COG1457 Purine-cytosine permease and related proteins.
yhiR protein networkhttps://string-db.org/network/2342.SOPEG_4045Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
gor protein networkhttps://string-db.org/network/2342.SOPEG_4046Glutathione reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
yhjK protein networkhttps://string-db.org/network/2342.SOPEG_4057Putative phosphodiesterase; ISSoEn4, terminal inverted repeat.
bcsA2 protein networkhttps://string-db.org/network/2342.SOPEG_4062Cellulose synthase catalytic subunit [UDP-forming]; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
yifE protein networkhttps://string-db.org/network/2342.SOPEG_4073YifE; COG0606 Predicted ATPase with chaperone activity; MG(2+) chelatase family protein/ComM-related protein.
hdfR protein networkhttps://string-db.org/network/2342.SOPEG_4074HTH-type transcriptional regulator hdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.
ytfT protein networkhttps://string-db.org/network/2342.SOPEG_4076Putative ABC transporter permease protein; Potential frameshift: common BLAST hit: gi|253690397|ref|YP_003019587.1| inner membrane ABC transporter permease protein YjfF; inner membrane ABC transp [...]
SOPEG_4084 protein networkhttps://string-db.org/network/2342.SOPEG_4084Mutator family transposase; Required for the transposition of the insertion element.
SOPEG_4086 protein networkhttps://string-db.org/network/2342.SOPEG_4086ISSoEn3, terminal inverted repeat.
AHF75091.1 protein networkhttps://string-db.org/network/2342.SOPEG_4087Transposase ISSoEn3, IS21 family.
ibpA protein networkhttps://string-db.org/network/2342.SOPEG_4091Small heat shock protein IbpA; Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock an [...]
ibpB protein networkhttps://string-db.org/network/2342.SOPEG_4092COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
glyQ protein networkhttps://string-db.org/network/2342.SOPEG_4097Glycine--tRNA ligase alpha subunit; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase.
glyS protein networkhttps://string-db.org/network/2342.SOPEG_4098COG0751 Glycyl-tRNA synthetase, beta subunit.
mtlD protein networkhttps://string-db.org/network/2342.SOPEG_4101Mannitol-1-phosphate 5-dehydrogenase; Potential frameshift: common BLAST hit: gi|85057992|ref|YP_453694.1| PTS system mannitol-specific IIABC component; COG4668 Mannitol/fructose-specific phospho [...]
mtlR protein networkhttps://string-db.org/network/2342.SOPEG_4102Mannitol repressor protein; COG3722 Transcriptional regulator.
sodA protein networkhttps://string-db.org/network/2342.SOPEG_4103Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family [...]
mnmE protein networkhttps://string-db.org/network/2342.SOPEG_4119tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
yidC protein networkhttps://string-db.org/network/2342.SOPEG_4120Inner membrane protein translocase component YidC long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in [...]
yidD protein networkhttps://string-db.org/network/2342.SOPEG_4121yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
rnpA protein networkhttps://string-db.org/network/2342.SOPEG_4122Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
rpmH protein networkhttps://string-db.org/network/2342.SOPEG_4123COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
dnaA protein networkhttps://string-db.org/network/2342.SOPEG_4124Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
dnaN protein networkhttps://string-db.org/network/2342.SOPEG_4125DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadin [...]
gyrB protein networkhttps://string-db.org/network/2342.SOPEG_4127DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
dgoR protein networkhttps://string-db.org/network/2342.SOPEG_4130D-Galactonate repressor DgoR; Potential frameshift: common BLAST hit: gi|242241319|ref|YP_002989500.1| sugar phosphatase; sugar phosphatase.
kup protein networkhttps://string-db.org/network/2342.SOPEG_414316S ribosomal RNA; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC [...]
viaA protein networkhttps://string-db.org/network/2342.SOPEG_4145Protein ViaA; Potential frameshift: common BLAST hit: gi|50118970|ref|YP_048137.1| regulatory ATPase RavA; regulatory ATPase RavA.
asnC protein networkhttps://string-db.org/network/2342.SOPEG_4146COG1522 Transcriptional regulators.
mioC protein networkhttps://string-db.org/network/2342.SOPEG_4147FMN-binding protein MioC; COG0716 Flavodoxins.