Organism Overview: Dichelobacter nodosus


 
dnaA protein networkhttps://string-db.org/network/246195.DNO_0001Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-st [...]
dnaN protein networkhttps://string-db.org/network/246195.DNO_0002DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
DNO_0003 protein networkhttps://string-db.org/network/246195.DNO_0003Acyltransferase domain protein; Identified by match to protein family HMM PF01553; match to protein family HMM PF07690.
yccS protein networkhttps://string-db.org/network/246195.DNO_0004Identified by match to protein family HMM PF05976; match to protein family HMM TIGR01666; match to protein family HMM TIGR01667.
murI protein networkhttps://string-db.org/network/246195.DNO_0005Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
DNO_0006 protein networkhttps://string-db.org/network/246195.DNO_0006Hypothetical protein; Identified by Glimmer2; putative.
DNO_0007 protein networkhttps://string-db.org/network/246195.DNO_0007Leucine Rich Repeat domain protein; Identified by match to protein family HMM PF00560.
DNO_0009 protein networkhttps://string-db.org/network/246195.DNO_0009Identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625.
DNO_0010 protein networkhttps://string-db.org/network/246195.DNO_0010Hypothetical protein; Identified by Glimmer2; putative.
uspA protein networkhttps://string-db.org/network/246195.DNO_0011Identified by match to protein family HMM PF00582.
DNO_0012 protein networkhttps://string-db.org/network/246195.DNO_0012Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by match to protein family HMM PF00254; match to protein family HMM PF01346.
DNO_0013 protein networkhttps://string-db.org/network/246195.DNO_0013Aminoacyl-histidine dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893.
DNO_0014 protein networkhttps://string-db.org/network/246195.DNO_0014Ornithine decarboxylase, constitutive; Identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.
potE protein networkhttps://string-db.org/network/246195.DNO_0015Amino acid transporter superfamily; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-or [...]
relA protein networkhttps://string-db.org/network/246195.DNO_0017GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to chan [...]
tsaD protein networkhttps://string-db.org/network/246195.DNO_0018O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in t [...]
DNO_0019 protein networkhttps://string-db.org/network/246195.DNO_0019Aminopeptidase, M1 family; Identified by match to protein family HMM PF01433; match to protein family HMM TIGR02414.
maeB protein networkhttps://string-db.org/network/246195.DNO_0020NADP-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF01515; match to protein family HMM PF03949.
DNO_0021 protein networkhttps://string-db.org/network/246195.DNO_0021Beta-hexosaminidase; Identified by match to protein family HMM PF00933.
DNO_0022 protein networkhttps://string-db.org/network/246195.DNO_0022Hypothetical protein; Identified by Glimmer2; putative.
DNO_0023 protein networkhttps://string-db.org/network/246195.DNO_0023Hypoxanthine phosphoribosyltransferase, Phosphoribosyltransferase family; Identified by match to protein family HMM PF00156.
DNO_0024 protein networkhttps://string-db.org/network/246195.DNO_0024Hypothetical lipoprotein.
DNO_0025 protein networkhttps://string-db.org/network/246195.DNO_0025Conserved hypothetical protein; Identified by match to protein family HMM PF04575.
queA protein networkhttps://string-db.org/network/246195.DNO_0026S-adenosylmethionine:tRNA ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (o [...]
truB protein networkhttps://string-db.org/network/246195.DNO_0027tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
rbfA protein networkhttps://string-db.org/network/246195.DNO_0028Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
infB protein networkhttps://string-db.org/network/246195.DNO_0029Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
nusA protein networkhttps://string-db.org/network/246195.DNO_0030Transcription termination factor; Participates in both transcription termination and antitermination.
rimP protein networkhttps://string-db.org/network/246195.DNO_0031Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
DNO_0033 protein networkhttps://string-db.org/network/246195.DNO_0033Bacterial extracellular solute-binding family protein; Identified by match to protein family HMM PF00497.
DNO_0034 protein networkhttps://string-db.org/network/246195.DNO_0034Bacterial extracellular solute-binding family protein; Identified by match to protein family HMM PF00497.
DNO_0035 protein networkhttps://string-db.org/network/246195.DNO_0035Conserved hypothetical membrane protein; Identified by match to protein family HMM PF02698.
DNO_0036 protein networkhttps://string-db.org/network/246195.DNO_0036Identified by match to protein family HMM PF00877.
DNO_0037 protein networkhttps://string-db.org/network/246195.DNO_0037Hypothetical protein; Identified by Glimmer2; putative.
secF protein networkhttps://string-db.org/network/246195.DNO_0038Preprotein translocase, SecF subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
secD protein networkhttps://string-db.org/network/246195.DNO_0039Preprotein translocase, SecD subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
yajC protein networkhttps://string-db.org/network/246195.DNO_0040Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into mem [...]
xerC protein networkhttps://string-db.org/network/246195.DNO_0041Site-specific recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
dapF protein networkhttps://string-db.org/network/246195.DNO_0042Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
DNO_0043 protein networkhttps://string-db.org/network/246195.DNO_0043Hypothetical protein; Identified by Glimmer2; putative.
DNO_0044 protein networkhttps://string-db.org/network/246195.DNO_0044Hypothetical protein; Identified by Glimmer2; putative.
DNO_0045 protein networkhttps://string-db.org/network/246195.DNO_0045Conserved hypothetical protein; Identified by match to protein family HMM PF01205.
DNO_0046 protein networkhttps://string-db.org/network/246195.DNO_0046Identified by match to protein family HMM PF00005.
DNO_0047 protein networkhttps://string-db.org/network/246195.DNO_0047Hypothetical membrane protein.
DNO_0048 protein networkhttps://string-db.org/network/246195.DNO_0048S49 family peptidase; Identified by match to protein family HMM PF01343; match to protein family HMM PF08496.
DNO_0049 protein networkhttps://string-db.org/network/246195.DNO_0049Aminoacyl-histidine dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893.
DNO_0050 protein networkhttps://string-db.org/network/246195.DNO_0050Conserved hypothetical protein.
DNO_0051 protein networkhttps://string-db.org/network/246195.DNO_0051Conserved hypothetical membrane protein; Identified by match to protein family HMM PF03458.
DNO_0052 protein networkhttps://string-db.org/network/246195.DNO_0052Hypothetical protein; Identified by Glimmer2; putative.
DNO_0053 protein networkhttps://string-db.org/network/246195.DNO_0053Mechanosensitive ion channel family; Identified by match to protein family HMM PF00924.
rpmB protein networkhttps://string-db.org/network/246195.DNO_006050S ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
rpmG protein networkhttps://string-db.org/network/246195.DNO_006150S ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
DNO_0062 protein networkhttps://string-db.org/network/246195.DNO_0062Conserved hypothetical membrane protein; Identified by match to protein family HMM PF07690.
pth protein networkhttps://string-db.org/network/246195.DNO_0063peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
rplY protein networkhttps://string-db.org/network/246195.DNO_006450S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 fa [...]
prsA protein networkhttps://string-db.org/network/246195.DNO_0065Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
DNO_0067 protein networkhttps://string-db.org/network/246195.DNO_0067Hypothetical lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
DNO_0068 protein networkhttps://string-db.org/network/246195.DNO_0068TPR repeat domain protein; Identified by match to protein family HMM PF07719.
hemA protein networkhttps://string-db.org/network/246195.DNO_0069glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
DNO_0070 protein networkhttps://string-db.org/network/246195.DNO_0070Hypothetical protein; Identified by Glimmer2; putative.
prfA protein networkhttps://string-db.org/network/246195.DNO_0071Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
prmC protein networkhttps://string-db.org/network/246195.DNO_0072Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs [...]
DNO_0073 protein networkhttps://string-db.org/network/246195.DNO_0073Identified by match to protein family HMM PF01244.
DNO_0074 protein networkhttps://string-db.org/network/246195.DNO_0074Enoyl-[acyl-carrier-protein] reductase.
DNO_0075 protein networkhttps://string-db.org/network/246195.DNO_0075Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01925.
uvrA protein networkhttps://string-db.org/network/246195.DNO_0076Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
purE protein networkhttps://string-db.org/network/246195.DNO_0077Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
purK protein networkhttps://string-db.org/network/246195.DNO_0078Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide [...]
DNO_0079 protein networkhttps://string-db.org/network/246195.DNO_0079Conserved hypothetical membrane protein; Identified by match to protein family HMM PF00892.
DNO_0080 protein networkhttps://string-db.org/network/246195.DNO_0080Conserved hypothetical protein; Identified by match to protein family HMM PF04287.
DNO_0081 protein networkhttps://string-db.org/network/246195.DNO_0081Identified by match to protein family HMM PF00691; match to protein family HMM PF05433.
ribF protein networkhttps://string-db.org/network/246195.DNO_0082Riboflavin kinase RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.
ileS protein networkhttps://string-db.org/network/246195.DNO_0083isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
lspA protein networkhttps://string-db.org/network/246195.DNO_0084Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
DNO_0085 protein networkhttps://string-db.org/network/246195.DNO_0085Hypothetical protein; Identified by Glimmer2; putative.
DNO_0086 protein networkhttps://string-db.org/network/246195.DNO_0086Glutathione S-transferase; Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
hemN-1 protein networkhttps://string-db.org/network/246195.DNO_0087Oxygen-independent coproporphyrinogen III oxidase; Identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; Belongs to the an [...]
purF protein networkhttps://string-db.org/network/246195.DNO_0088Amidophosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine [...]
rsmJ protein networkhttps://string-db.org/network/246195.DNO_0089Conserved hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.
DNO_0090 protein networkhttps://string-db.org/network/246195.DNO_0090Identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378.
DNO_0091 protein networkhttps://string-db.org/network/246195.DNO_0091NADPH-dependent FMN reductase; Identified by match to protein family HMM PF03358.
gap protein networkhttps://string-db.org/network/246195.DNO_0092Glyceraldehyde-3-phosphate dehydrogenase; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldeh [...]
msbA protein networkhttps://string-db.org/network/246195.DNO_0094ABC transporter family protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the [...]
rfaE protein networkhttps://string-db.org/network/246195.DNO_0095ADP-heptose synthase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-te [...]
DNO_0096 protein networkhttps://string-db.org/network/246195.DNO_0096FAD dependent oxidoreductase superfamily; Identified by match to protein family HMM PF01266.
DNO_0097 protein networkhttps://string-db.org/network/246195.DNO_0097Identified by match to protein family HMM PF00535.
DNO_0098 protein networkhttps://string-db.org/network/246195.DNO_0098Hypothetical protein; Identified by Glimmer2; putative.
cydB protein networkhttps://string-db.org/network/246195.DNO_0099Cytochrome bd ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.
cydA protein networkhttps://string-db.org/network/246195.DNO_0100Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.
cydC protein networkhttps://string-db.org/network/246195.DNO_0101ABC-type transporter involved in cytochrome bd biosynthesis; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868.
cydD protein networkhttps://string-db.org/network/246195.DNO_0102ABC-type transporter involved in cytochrome bd biosynthesis; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857.
DNO_0103 protein networkhttps://string-db.org/network/246195.DNO_0103Hypothetical protein; Identified by Glimmer2; putative.
DNO_0104 protein networkhttps://string-db.org/network/246195.DNO_0104Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.
DNO_0105 protein networkhttps://string-db.org/network/246195.DNO_0105Alkaline phosphatase; Identified by match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
DNO_0106 protein networkhttps://string-db.org/network/246195.DNO_0106Conserved hypothetical protein; Identified by match to protein family HMM PF06354; Belongs to the UPF0597 family.
DNO_0107 protein networkhttps://string-db.org/network/246195.DNO_0107Conserved hypothetical membrane protein.
clpB protein networkhttps://string-db.org/network/246195.DNO_0108ATP-dependent protease ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs [...]
fimB protein networkhttps://string-db.org/network/246195.DNO_0109Fimbrial protein FimB.
fimA protein networkhttps://string-db.org/network/246195.DNO_0110Fimbrial subunit FimA; Identified by match to protein family HMM PF00114; match to protein family HMM PF07963; match to protein family HMM TIGR02532; Belongs to the N-Me-Phe pilin family.
aroA protein networkhttps://string-db.org/network/246195.DNO_01113-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
cmk protein networkhttps://string-db.org/network/246195.DNO_0112Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.
rpsA protein networkhttps://string-db.org/network/246195.DNO_0113Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
ihfB protein networkhttps://string-db.org/network/246195.DNO_0114Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tra [...]
DNO_0115 protein networkhttps://string-db.org/network/246195.DNO_0115Identified by match to protein family HMM PF00565.
pcnB protein networkhttps://string-db.org/network/246195.DNO_0116poly(A) polymerase PcnB; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influ [...]
DNO_0117 protein networkhttps://string-db.org/network/246195.DNO_01177,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase, HPPK; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498.
ptsI protein networkhttps://string-db.org/network/246195.DNO_0118Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...]
DNO_0119 protein networkhttps://string-db.org/network/246195.DNO_0119PTS phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
DNO_0120 protein networkhttps://string-db.org/network/246195.DNO_0120Haloacid dehalogenase-like hydrolase, COF family; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein fam [...]
DNO_0121 protein networkhttps://string-db.org/network/246195.DNO_0121Hypothetical protein; Identified by Glimmer2; putative.
DNO_0122 protein networkhttps://string-db.org/network/246195.DNO_0122Hypothetical protein; Identified by Glimmer2; putative.
DNO_0123 protein networkhttps://string-db.org/network/246195.DNO_0123Bacterial solute binding family protein.
DNO_0125 protein networkhttps://string-db.org/network/246195.DNO_0125Identified by match to protein family HMM PF00561.
ssb-1 protein networkhttps://string-db.org/network/246195.DNO_0126Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action du [...]
DNO_0127 protein networkhttps://string-db.org/network/246195.DNO_0127Conserved hypothetical protein; Identified by match to protein family HMM TIGR02122.
DNO_0128 protein networkhttps://string-db.org/network/246195.DNO_0128Hypothetical lipoprotein; Identified by match to protein family HMM PF06104.
dacB protein networkhttps://string-db.org/network/246195.DNO_0129D-alanyl-D-alanine carboxypeptidase C, S13 family; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666.
DNO_0130 protein networkhttps://string-db.org/network/246195.DNO_0130Conserved hypothetical protein; Belongs to the UPF0307 family.
hemN-2 protein networkhttps://string-db.org/network/246195.DNO_0131Oxygen-independent coproporphyrinogen III oxidase HemN; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. B [...]
DNO_0132 protein networkhttps://string-db.org/network/246195.DNO_0132Carbon starvation protein CstA family; Identified by match to protein family HMM PF02554.
DNO_0133 protein networkhttps://string-db.org/network/246195.DNO_0133Conserved hypothetical membrane protein; Identified by match to protein family HMM PF00892.
DNO_0134 protein networkhttps://string-db.org/network/246195.DNO_0134Conserved hypothetical protein.
DNO_0135 protein networkhttps://string-db.org/network/246195.DNO_0135Conserved hypothetical protein.
feoA protein networkhttps://string-db.org/network/246195.DNO_0136Iron transport protein FeoA; Identified by match to protein family HMM PF04023.
feoB protein networkhttps://string-db.org/network/246195.DNO_0137Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A. [...]
DNO_0138 protein networkhttps://string-db.org/network/246195.DNO_0138Response regulator receiver domain protein.
DNO_0139 protein networkhttps://string-db.org/network/246195.DNO_0139NUDIX hydrolase domain protein; Identified by match to protein family HMM PF00293; match to protein family HMM PF01467; match to protein family HMM TIGR00125.
DNO_0140 protein networkhttps://string-db.org/network/246195.DNO_0140Conserved hypothetical membrane protein.
DNO_0141 protein networkhttps://string-db.org/network/246195.DNO_0141Conserved hypothetical membrane protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
DNO_0142 protein networkhttps://string-db.org/network/246195.DNO_0142Probable OxrR-like transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory f [...]
ahpC protein networkhttps://string-db.org/network/246195.DNO_0143Alkyl hydroperoxide reductase C22 subunit; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role [...]
DNO_0144 protein networkhttps://string-db.org/network/246195.DNO_0144Alkyl hydroperoxide reductase, F subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM [...]
DNO_0145 protein networkhttps://string-db.org/network/246195.DNO_0145Hypothetical protein; Identified by Glimmer2; putative.
DNO_0146 protein networkhttps://string-db.org/network/246195.DNO_0146Conserved hypothetical protein; Identified by match to protein family HMM PF03029; match to protein family HMM TIGR00231.
DNO_0147 protein networkhttps://string-db.org/network/246195.DNO_0147Hypothetical protein; Identified by Glimmer2; putative.
DNO_0148 protein networkhttps://string-db.org/network/246195.DNO_0148Conserved hypothetical protein.
DNO_0149 protein networkhttps://string-db.org/network/246195.DNO_0149Conserved hypothetical protein; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.
DNO_0150 protein networkhttps://string-db.org/network/246195.DNO_0150Conserved hypothetical protein.
DNO_0151 protein networkhttps://string-db.org/network/246195.DNO_0151MarR family transcriptional regulator; Identified by match to protein family HMM PF01047.
topA protein networkhttps://string-db.org/network/246195.DNO_0152DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
smg protein networkhttps://string-db.org/network/246195.DNO_0153Conserved hypothetical protein; Belongs to the Smg family.
dprA protein networkhttps://string-db.org/network/246195.DNO_0154DNA processing protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
DNO_0155 protein networkhttps://string-db.org/network/246195.DNO_0155LysM domain protein; Identified by match to protein family HMM PF01476.
def protein networkhttps://string-db.org/network/246195.DNO_0156Formylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methion [...]
fmt protein networkhttps://string-db.org/network/246195.DNO_0157methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
rsmB protein networkhttps://string-db.org/network/246195.DNO_0158rRNA SAM-dependent methyltransferase, Fmu; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
DNO_0159 protein networkhttps://string-db.org/network/246195.DNO_0159Hypothetical protein; Identified by Glimmer2; putative.
ntrY protein networkhttps://string-db.org/network/246195.DNO_0160Histidine kinase, NtrY; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; match to [...]
ntrX protein networkhttps://string-db.org/network/246195.DNO_0161Response regulator, NtrX; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.
DNO_0162 protein networkhttps://string-db.org/network/246195.DNO_0162Cold-shock DNA-binding domain protein; Identified by match to protein family HMM PF00313; match to protein family HMM PF06961.
pgi protein networkhttps://string-db.org/network/246195.DNO_0163Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family.
uvrD-1 protein networkhttps://string-db.org/network/246195.DNO_0164DNA helicase II; Identified by match to protein family HMM PF00580.
fba protein networkhttps://string-db.org/network/246195.DNO_0166Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-b [...]
csy1 protein networkhttps://string-db.org/network/246195.DNO_0167Conserved hypothetical protein; Identified by match to protein family HMM TIGR02564.
csy2 protein networkhttps://string-db.org/network/246195.DNO_0168Conserved hypothetical protein; Identified by match to protein family HMM TIGR02565.
csy3 protein networkhttps://string-db.org/network/246195.DNO_0169Conserved hypothetical protein; Identified by match to protein family HMM TIGR02566.
csy4 protein networkhttps://string-db.org/network/246195.DNO_0170Conserved hypothetical protein; Identified by match to protein family HMM TIGR02563.
DNO_0171 protein networkhttps://string-db.org/network/246195.DNO_0171Hypothetical protein; Identified by Glimmer2; putative.
DNO_0172 protein networkhttps://string-db.org/network/246195.DNO_0172Conserved hypothetical protein.
vrlS protein networkhttps://string-db.org/network/246195.DNO_0173DEAD-DEAH box helicase domain protein VrlS; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271.
vrlR protein networkhttps://string-db.org/network/246195.DNO_0174Hypothetical protein VrlR; Identified by Glimmer2; putative.
vrlQ protein networkhttps://string-db.org/network/246195.DNO_0175Conserved hypothetical protein VrlQ.
vrlP protein networkhttps://string-db.org/network/246195.DNO_0176Conserved hypothetical protein VrlP; Identified by match to protein family HMM PF08665.
vrlO protein networkhttps://string-db.org/network/246195.DNO_0177DEAD helicase domain protein VrlO; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.
vrlM protein networkhttps://string-db.org/network/246195.DNO_0179Hypothetical protein VrlM; Identified by Glimmer2; putative.
vrlL protein networkhttps://string-db.org/network/246195.DNO_0180S-adenosyl-L-methionine-dependent methyltransferases family protein VrlL.
vrlK protein networkhttps://string-db.org/network/246195.DNO_0181Conserved hypothetical protein VrlK.
vrlJ protein networkhttps://string-db.org/network/246195.DNO_0182Conserved hypothetical protein VrlJ.
vrlI protein networkhttps://string-db.org/network/246195.DNO_0183Conserved hypothetical protein VrlI; Identified by match to protein family HMM TIGR01764.
vrlH protein networkhttps://string-db.org/network/246195.DNO_0184Conserved hypothetical protein VrlH.
vrlG protein networkhttps://string-db.org/network/246195.DNO_0185Glutamine amidotransferase domain protein VrlG; Identified by match to protein family HMM PF00310.
vrlF protein networkhttps://string-db.org/network/246195.DNO_0186Conserved hypothetical protein VrlF.
vrlE protein networkhttps://string-db.org/network/246195.DNO_0187Conserved hypothetical protein VrlE.
vrlD protein networkhttps://string-db.org/network/246195.DNO_0188Conserved hypothetical protein VrlD.
vrlC protein networkhttps://string-db.org/network/246195.DNO_0189Conserved hypothetical protein VrlC; Identified by match to protein family HMM PF02012.
DNO_0192 protein networkhttps://string-db.org/network/246195.DNO_0192Conserved hypothetical protein.
DNO_0194 protein networkhttps://string-db.org/network/246195.DNO_0194Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF05433.
DNO_0195 protein networkhttps://string-db.org/network/246195.DNO_0195Conserved hypothetical protein; Identified by match to protein family HMM PF01987.
pncB protein networkhttps://string-db.org/network/246195.DNO_0196Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and [...]
nadE protein networkhttps://string-db.org/network/246195.DNO_0197NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
ppa protein networkhttps://string-db.org/network/246195.DNO_0198Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
DNO_0200 protein networkhttps://string-db.org/network/246195.DNO_0200Identified by match to protein family HMM PF03806.
pepT-1 protein networkhttps://string-db.org/network/246195.DNO_0201Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
recF protein networkhttps://string-db.org/network/246195.DNO_0202DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...]
DNO_0203 protein networkhttps://string-db.org/network/246195.DNO_0203Identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368.
DNO_0204 protein networkhttps://string-db.org/network/246195.DNO_0204Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
DNO_0205 protein networkhttps://string-db.org/network/246195.DNO_0205FxsA cytoplasmic membrane protein family; Identified by match to protein family HMM PF04186.
polA protein networkhttps://string-db.org/network/246195.DNO_0206DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
purN protein networkhttps://string-db.org/network/246195.DNO_0207Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
cysS protein networkhttps://string-db.org/network/246195.DNO_0208cysteinyl-tRNA synthetase class I; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR004 [...]
DNO_0209 protein networkhttps://string-db.org/network/246195.DNO_0209Peptidylprolyl cis-trans isomerase, cyclophilin- type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belon [...]
DNO_0210 protein networkhttps://string-db.org/network/246195.DNO_0210Peptidylprolyl cis-trans isomerase, cyclophilin- type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belon [...]
lpxH protein networkhttps://string-db.org/network/246195.DNO_0211UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water [...]
DNO_0212 protein networkhttps://string-db.org/network/246195.DNO_0212FAD dependent oxidoreductase family protein; Identified by match to protein family HMM PF01266.
glpK protein networkhttps://string-db.org/network/246195.DNO_0213Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
glpF protein networkhttps://string-db.org/network/246195.DNO_0214Major intrinsic protein superfamily, glycerol facilitator protein; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
DNO_0215 protein networkhttps://string-db.org/network/246195.DNO_0215Hypothetical protein; Identified by Glimmer2; putative.
DNO_0216 protein networkhttps://string-db.org/network/246195.DNO_0216Hypothetical protein; Identified by Glimmer2; putative.
DNO_0218 protein networkhttps://string-db.org/network/246195.DNO_0218Conserved hypothetical protein; Identified by match to protein family HMM PF04373.
DNO_0219 protein networkhttps://string-db.org/network/246195.DNO_0219Conserved hypothetical protein; Identified by match to protein family HMM PF01863.
hsdR protein networkhttps://string-db.org/network/246195.DNO_0220Type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
DNO_0221 protein networkhttps://string-db.org/network/246195.DNO_0221Conserved hypothetical protein.
hsdS protein networkhttps://string-db.org/network/246195.DNO_0222Type I restriction modification DNA specificity domain protein; Identified by match to protein family HMM PF01420.
hsdM protein networkhttps://string-db.org/network/246195.DNO_0223Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497.
DNO_0224 protein networkhttps://string-db.org/network/246195.DNO_0224Conserved hypothetical protein.
DNO_0225 protein networkhttps://string-db.org/network/246195.DNO_0225Identified by match to protein family HMM PF01553.
DNO_0226 protein networkhttps://string-db.org/network/246195.DNO_0226DNA-binding protein Hu; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
lon protein networkhttps://string-db.org/network/246195.DNO_0227ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...]
clpX protein networkhttps://string-db.org/network/246195.DNO_0228ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/246195.DNO_0229ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the d [...]
tig protein networkhttps://string-db.org/network/246195.DNO_0230Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
DNO_0232 protein networkhttps://string-db.org/network/246195.DNO_0232Hypothetical protein; Identified by Glimmer2; putative.
DNO_0234 protein networkhttps://string-db.org/network/246195.DNO_0234Conserved hypothetical protein.
DNO_0235 protein networkhttps://string-db.org/network/246195.DNO_0235Calcium binding domain protein; Identified by match to protein family HMM PF00353.
trpS protein networkhttps://string-db.org/network/246195.DNO_0236tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
DNO_0237 protein networkhttps://string-db.org/network/246195.DNO_0237Sua5-YciO-YrdC-YwlC domain protein; Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family.
DNO_0238 protein networkhttps://string-db.org/network/246195.DNO_0238Conserved hypothetical protein; Identified by match to protein family HMM PF00563.
DNO_0239 protein networkhttps://string-db.org/network/246195.DNO_0239Identified by match to protein family HMM PF03060.
mnmC protein networkhttps://string-db.org/network/246195.DNO_0240Conserved hypothetical protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-depend [...]
DNO_0241 protein networkhttps://string-db.org/network/246195.DNO_0241Hypothetical protein; Identified by Glimmer2; putative.
DNO_0242 protein networkhttps://string-db.org/network/246195.DNO_0242Oligopeptidase, M3 family; Identified by match to protein family HMM PF01432.
DNO_0243 protein networkhttps://string-db.org/network/246195.DNO_0243Conserved hypothetical protein; Identified by match to protein family HMM PF04970.
holA protein networkhttps://string-db.org/network/246195.DNO_0244DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.
DNO_0245 protein networkhttps://string-db.org/network/246195.DNO_0245Hypothetical lipoprotein.
leuS protein networkhttps://string-db.org/network/246195.DNO_0246leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs [...]
lnt protein networkhttps://string-db.org/network/246195.DNO_0247Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
DNO_0248 protein networkhttps://string-db.org/network/246195.DNO_0248Conserved hypothetical lipoprotein; Identified by match to protein family HMM TIGR02122.
DNO_0249 protein networkhttps://string-db.org/network/246195.DNO_0249Conserved hypothetical protein; Identified by match to protein family HMM PF00149.
recC protein networkhttps://string-db.org/network/246195.DNO_0251Exodeoxyribonuclease V, gamma subunit.
DNO_0252 protein networkhttps://string-db.org/network/246195.DNO_0252Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01757.
rlmJ protein networkhttps://string-db.org/network/246195.DNO_0253Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
dgt protein networkhttps://string-db.org/network/246195.DNO_0254Deoxyguanosinetriphosphate triphosphohydrolase; Identified by match to protein family HMM TIGR01353.
DNO_0255 protein networkhttps://string-db.org/network/246195.DNO_0255Conserved hypothetical protein; Identified by match to protein family HMM PF09084.
DNO_0256 protein networkhttps://string-db.org/network/246195.DNO_0256ABC transporter domain protein; Identified by match to protein family HMM PF00528.
DNO_0257 protein networkhttps://string-db.org/network/246195.DNO_0257ABC transporter domain protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463.
gepC protein networkhttps://string-db.org/network/246195.DNO_0258Hypothetical protein; Identified by Glimmer2; putative.
gepB protein networkhttps://string-db.org/network/246195.DNO_0259Conserved hypothetical membrane protein.
gepA protein networkhttps://string-db.org/network/246195.DNO_0260Conserved hypothetical protein.
DNO_0261 protein networkhttps://string-db.org/network/246195.DNO_0261Hypothetical protein; Identified by Glimmer2; putative.
DNO_0262 protein networkhttps://string-db.org/network/246195.DNO_0262Hypothetical protein; Identified by Glimmer2; putative.
regA1 protein networkhttps://string-db.org/network/246195.DNO_0263Regulatory protein RegA1; Identified by match to protein family HMM PF00717; match to protein family HMM PF01381.
vapE2 protein networkhttps://string-db.org/network/246195.DNO_0266Virulence-associated protein VapE2; Identified by match to protein family HMM PF05272.
vapF protein networkhttps://string-db.org/network/246195.DNO_0267Virulence-associated protein VapF.
vapG2 protein networkhttps://string-db.org/network/246195.DNO_0269Virulence-associated protein VapG2.
DNO_0270 protein networkhttps://string-db.org/network/246195.DNO_0270Hypothetical protein; Identified by Glimmer2; putative.
vapA2 protein networkhttps://string-db.org/network/246195.DNO_0271Virulence-associated protein VapA2; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.
vapI protein networkhttps://string-db.org/network/246195.DNO_0272Virulence-associated protein VapI; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.
DNO_0273 protein networkhttps://string-db.org/network/246195.DNO_0273Plasmid maintenance system killer family protein; Identified by match to protein family HMM PF05015.
toxA1 protein networkhttps://string-db.org/network/246195.DNO_0274Plasmid maintenance system killer family protein ToxA1; Identified by match to protein family HMM PF05015.
vapA1 protein networkhttps://string-db.org/network/246195.DNO_0275Virulence-associated protein VapA1; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.
vapB1 protein networkhttps://string-db.org/network/246195.DNO_0276Virulence-associated protein VapB1; Identified by match to protein family HMM PF04014.
vapC1 protein networkhttps://string-db.org/network/246195.DNO_0277Virulence-associated protein VapC1; Identified by match to protein family HMM PF01850.
vapE1 protein networkhttps://string-db.org/network/246195.DNO_0279Virulence-associated protein VapE1; Identified by match to protein family HMM PF05272.
vapG1 protein networkhttps://string-db.org/network/246195.DNO_0280Virulence-associated protein VapG1.
vapH protein networkhttps://string-db.org/network/246195.DNO_0281Virulence-associated protein VapH.
intA1 protein networkhttps://string-db.org/network/246195.DNO_0282Integrase A1; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
glpA protein networkhttps://string-db.org/network/246195.DNO_0284Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid g [...]
DNO_0285 protein networkhttps://string-db.org/network/246195.DNO_0285Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00657; Belongs to the aspartokinase family.
alaS protein networkhttps://string-db.org/network/246195.DNO_0286alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
recX protein networkhttps://string-db.org/network/246195.DNO_0287RecX family regulatory protein; Modulates RecA activity; Belongs to the RecX family.
recA protein networkhttps://string-db.org/network/246195.DNO_0288DNA recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hy [...]
DNO_0289 protein networkhttps://string-db.org/network/246195.DNO_0289Conserved hypothetical protein.
gmhA protein networkhttps://string-db.org/network/246195.DNO_0290Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
uppP protein networkhttps://string-db.org/network/246195.DNO_0291Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
secB protein networkhttps://string-db.org/network/246195.DNO_0292Protein export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor protein [...]
gpsA protein networkhttps://string-db.org/network/246195.DNO_0293Glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF0747 [...]
rluA protein networkhttps://string-db.org/network/246195.DNO_0294Ribosomal large subunit pseudouridine synthase, RluA; Identified by match to protein family HMM PF00849.
DNO_0295 protein networkhttps://string-db.org/network/246195.DNO_0295Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01594.
DNO_0296 protein networkhttps://string-db.org/network/246195.DNO_0296HemY protein; Identified by match to protein family HMM PF07219; match to protein family HMM PF07719.
DNO_0297 protein networkhttps://string-db.org/network/246195.DNO_0297Hypothetical protein; Identified by Glimmer2; putative.
hemD protein networkhttps://string-db.org/network/246195.DNO_0298uroporphyrinogen-III synthase family protein HemD; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
hemC protein networkhttps://string-db.org/network/246195.DNO_0299Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
DNO_0300 protein networkhttps://string-db.org/network/246195.DNO_0300Hypothetical lipoprotein.
zapD protein networkhttps://string-db.org/network/246195.DNO_0301Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase a [...]
rne protein networkhttps://string-db.org/network/246195.DNO_0302Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation [...]
DNO_0303 protein networkhttps://string-db.org/network/246195.DNO_0303Hypothetical protein; Identified by Glimmer2; putative.
kdsB protein networkhttps://string-db.org/network/246195.DNO_03043-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
uvrC protein networkhttps://string-db.org/network/246195.DNO_0305Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
pgsA protein networkhttps://string-db.org/network/246195.DNO_0306CDP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphati [...]
rnt protein networkhttps://string-db.org/network/246195.DNO_0307Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP [...]
DNO_0308 protein networkhttps://string-db.org/network/246195.DNO_0308Hypothetical protein; Identified by Glimmer2; putative.
nagA protein networkhttps://string-db.org/network/246195.DNO_0309N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221.
DNO_0310 protein networkhttps://string-db.org/network/246195.DNO_0310Conserved hypothetical protein; Identified by match to protein family HMM PF04175; match to protein family HMM TIGR00743.
DNO_0311 protein networkhttps://string-db.org/network/246195.DNO_0311N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
DNO_0312 protein networkhttps://string-db.org/network/246195.DNO_0312Identified by match to protein family HMM PF00691.
DNO_0313 protein networkhttps://string-db.org/network/246195.DNO_0313Conserved hypothetical lipoprotein.
fabA protein networkhttps://string-db.org/network/246195.DNO_0314Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-de [...]
fabB protein networkhttps://string-db.org/network/246195.DNO_0315Beta-ketoacyl synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF02801; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
DNO_0316 protein networkhttps://string-db.org/network/246195.DNO_0316Hypothetical protein; Identified by Glimmer2; putative.
queH protein networkhttps://string-db.org/network/246195.DNO_0317Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) an [...]
DNO_0318 protein networkhttps://string-db.org/network/246195.DNO_0318Conserved hypothetical protein; Identified by match to protein family HMM PF01471.
tgt protein networkhttps://string-db.org/network/246195.DNO_0319Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...]
DNO_0320 protein networkhttps://string-db.org/network/246195.DNO_0320Identified by match to protein family HMM PF00691.
gyrA protein networkhttps://string-db.org/network/246195.DNO_0321DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
DNO_0322 protein networkhttps://string-db.org/network/246195.DNO_0322Conserved hypothetical protein; Identified by match to protein family HMM PF05656.
ilvA protein networkhttps://string-db.org/network/246195.DNO_0323Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a producti [...]
dnaB protein networkhttps://string-db.org/network/246195.DNO_0324Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DN [...]
alr protein networkhttps://string-db.org/network/246195.DNO_0325Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
radA protein networkhttps://string-db.org/network/246195.DNO_0326DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
galU protein networkhttps://string-db.org/network/246195.DNO_0327UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.
DNO_0328 protein networkhttps://string-db.org/network/246195.DNO_0328Transposase IS200-like protein; Identified by match to protein family HMM PF01797.
sucA protein networkhttps://string-db.org/network/246195.DNO_03292-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.
DNO_0330 protein networkhttps://string-db.org/network/246195.DNO_0330Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
sucB protein networkhttps://string-db.org/network/246195.DNO_03312-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family H [...]
DNO_0332 protein networkhttps://string-db.org/network/246195.DNO_0332Conserved hypothetical membrane protein.
DNO_0333 protein networkhttps://string-db.org/network/246195.DNO_0333Identified by match to protein family HMM PF00691.
DNO_0334 protein networkhttps://string-db.org/network/246195.DNO_0334Identified by match to protein family HMM PF00353.
DNO_0335 protein networkhttps://string-db.org/network/246195.DNO_0335ABC-2 type transporter family protein; Identified by match to protein family HMM PF01061.
DNO_0336 protein networkhttps://string-db.org/network/246195.DNO_0336ABC transporter domain protein; Identified by match to protein family HMM PF00005.
glf protein networkhttps://string-db.org/network/246195.DNO_0338UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031.
DNO_0339 protein networkhttps://string-db.org/network/246195.DNO_0339Identified by match to protein family HMM PF00535.
DNO_0340 protein networkhttps://string-db.org/network/246195.DNO_0340Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.
DNO_0341 protein networkhttps://string-db.org/network/246195.DNO_0341Conserved hypothetical protein; Identified by match to protein family HMM PF05951; match to protein family HMM PF08291; match to protein family HMM TIGR01409.
DNO_0342 protein networkhttps://string-db.org/network/246195.DNO_0342Conserved hypothetical protein.
tsaC protein networkhttps://string-db.org/network/246195.DNO_0343Conserved hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conve [...]
pilM protein networkhttps://string-db.org/network/246195.DNO_0344Type IV fimbrial biogenesis protein PilM.
pilN protein networkhttps://string-db.org/network/246195.DNO_0345Type IV fimbrial assembly protein PilN; Identified by match to protein family HMM PF05137.
pilO protein networkhttps://string-db.org/network/246195.DNO_0346Type IV fimbrial biogenesis protein PilO.
pilP protein networkhttps://string-db.org/network/246195.DNO_0347Type IV fimbrial biogenesis protein PilP.
pilQ protein networkhttps://string-db.org/network/246195.DNO_0348Type IV fimbrial pore PilQ; Identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515.
gatB protein networkhttps://string-db.org/network/246195.DNO_0349glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
typA protein networkhttps://string-db.org/network/246195.DNO_0350GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match [...]
valS protein networkhttps://string-db.org/network/246195.DNO_0351valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
DNO_0352 protein networkhttps://string-db.org/network/246195.DNO_0352Identified by match to protein family HMM PF03577.
dksA protein networkhttps://string-db.org/network/246195.DNO_0353RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation o [...]
DNO_0354 protein networkhttps://string-db.org/network/246195.DNO_0354Zinc uptake system protein; Identified by match to protein family HMM PF00950.
znuC protein networkhttps://string-db.org/network/246195.DNO_0355Zinc uptake system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter [...]
priA protein networkhttps://string-db.org/network/246195.DNO_0356Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
DNO_0357 protein networkhttps://string-db.org/network/246195.DNO_0357Hypothetical protein; Identified by Glimmer2; putative.
DNO_0358 protein networkhttps://string-db.org/network/246195.DNO_0358Conserved hypothetical protein.
tilS protein networkhttps://string-db.org/network/246195.DNO_0359tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
pyrG protein networkhttps://string-db.org/network/246195.DNO_0360CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
kdsA protein networkhttps://string-db.org/network/246195.DNO_03612-dehydro-3-deoxyphosphooctonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01362; Belongs to the KdsA family.
eno protein networkhttps://string-db.org/network/246195.DNO_0362Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
DNO_0363 protein networkhttps://string-db.org/network/246195.DNO_0363Septum formation initiator family protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell di [...]
DNO_0364 protein networkhttps://string-db.org/network/246195.DNO_0364ABC transporter domain protein; Identified by match to protein family HMM PF00005.
sbcD protein networkhttps://string-db.org/network/246195.DNO_0365Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' dou [...]
sbcC protein networkhttps://string-db.org/network/246195.DNO_0366Exonuclease SbcC; Identified by match to protein family HMM PF02463.
DNO_0367 protein networkhttps://string-db.org/network/246195.DNO_0367Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
DNO_0368 protein networkhttps://string-db.org/network/246195.DNO_0368Conserved hypothetical membrane protein; Identified by match to protein family HMM PF04018.
DNO_0369 protein networkhttps://string-db.org/network/246195.DNO_0369Exopolyphosphatase; Identified by match to protein family HMM PF02541; Belongs to the GppA/Ppx family.
DNO_0370 protein networkhttps://string-db.org/network/246195.DNO_0370Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF05981.
DNO_0371 protein networkhttps://string-db.org/network/246195.DNO_0371Conserved hypothetical protein.
DNO_0372 protein networkhttps://string-db.org/network/246195.DNO_0372Conserved hypothetical protein; Identified by match to protein family HMM PF01957.
DNO_0373 protein networkhttps://string-db.org/network/246195.DNO_0373SPFH domain - Band 7 family protein; Identified by match to protein family HMM PF01145.
DNO_0374 protein networkhttps://string-db.org/network/246195.DNO_0374Hypothetical protein; Identified by Glimmer2; putative.
DNO_0375 protein networkhttps://string-db.org/network/246195.DNO_0375Hypothetical protein; Identified by Glimmer2; putative.
guaB protein networkhttps://string-db.org/network/246195.DNO_0376Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
DNO_0377 protein networkhttps://string-db.org/network/246195.DNO_0377Bacterial extracellular solute-binding family protein.
DNO_0379 protein networkhttps://string-db.org/network/246195.DNO_0379Hypothetical protein; Identified by Glimmer2; putative.
guaA protein networkhttps://string-db.org/network/246195.DNO_0380GMP synthase; Catalyzes the synthesis of GMP from XMP.
uvrD-2 protein networkhttps://string-db.org/network/246195.DNO_0381DNA helicase UvrD; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts [...]
omp1E protein networkhttps://string-db.org/network/246195.DNO_0383Outer membrane protein 1E.
omp1D protein networkhttps://string-db.org/network/246195.DNO_0384Outer membrane protein 1D.
DNO_0386 protein networkhttps://string-db.org/network/246195.DNO_0386Transposase IS200-like protein; Identified by match to protein family HMM PF01797.
DNO_0387 protein networkhttps://string-db.org/network/246195.DNO_0387Transposase, IS605 family; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766.
DNO_0388 protein networkhttps://string-db.org/network/246195.DNO_0388Conserved hypothetical protein; Identified by match to protein family HMM PF00300.
ligA protein networkhttps://string-db.org/network/246195.DNO_0389DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...]
DNO_0390 protein networkhttps://string-db.org/network/246195.DNO_0390Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required [...]
engB protein networkhttps://string-db.org/network/246195.DNO_0391GTPase; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
DNO_0392 protein networkhttps://string-db.org/network/246195.DNO_0392Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01925.
DNO_0393 protein networkhttps://string-db.org/network/246195.DNO_0393L-asparaginase II; Identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; Belongs to the asparaginase 1 family.
DNO_0394 protein networkhttps://string-db.org/network/246195.DNO_0394Peptidase, U32 family; Identified by match to protein family HMM PF01136.
luxS protein networkhttps://string-db.org/network/246195.DNO_0395Autoinducer-2 production protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential [...]
DNO_0396 protein networkhttps://string-db.org/network/246195.DNO_0396Voltage-gated chloride channel protein; Identified by match to protein family HMM PF00654.
ubiA protein networkhttps://string-db.org/network/246195.DNO_03974-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubi [...]
DNO_0398 protein networkhttps://string-db.org/network/246195.DNO_0398ABC transporter family ATP-binding protein; Identified by match to protein family HMM PF00005.
DNO_0399 protein networkhttps://string-db.org/network/246195.DNO_0399ATP-binding family protein; Displays ATPase and GTPase activities.
DNO_0400 protein networkhttps://string-db.org/network/246195.DNO_0400Conserved hypothetical protein; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383.
DNO_0401 protein networkhttps://string-db.org/network/246195.DNO_0401Hypothetical lipoprotein.
DNO_0402 protein networkhttps://string-db.org/network/246195.DNO_0402Colicin V family protein CvpA; Identified by match to protein family HMM PF02674.
DNO_0403 protein networkhttps://string-db.org/network/246195.DNO_0403Conserved hypothetical protein; Identified by match to protein family HMM PF05036.
folC protein networkhttps://string-db.org/network/246195.DNO_0404Folylpolyglutamate synthase; Identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family.
accD protein networkhttps://string-db.org/network/246195.DNO_0405acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carr [...]
DNO_0406 protein networkhttps://string-db.org/network/246195.DNO_0406Hypothetical protein; Identified by Glimmer2; putative.
DNO_0407 protein networkhttps://string-db.org/network/246195.DNO_0407Hypothetical lipoprotein; Identified by match to protein family HMM PF08085.
recD protein networkhttps://string-db.org/network/246195.DNO_0408Exonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bi [...]
DNO_0412 protein networkhttps://string-db.org/network/246195.DNO_0412Conserved hypothetical membrane protein; Identified by match to protein family HMM PF03773.
DNO_0413 protein networkhttps://string-db.org/network/246195.DNO_0413Identified by match to protein family HMM TIGR00412.
apt protein networkhttps://string-db.org/network/246195.DNO_0414Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
DNO_0415 protein networkhttps://string-db.org/network/246195.DNO_0415TatD family DNase; Identified by match to protein family HMM PF01026.
DNO_0416 protein networkhttps://string-db.org/network/246195.DNO_0416Identified by match to protein family HMM PF00899.
rpmE protein networkhttps://string-db.org/network/246195.DNO_0417Ribosomal protein L31; Identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105.
dsbD protein networkhttps://string-db.org/network/246195.DNO_0418Thiol:disulfide interchange protein DsbD; Identified by match to protein family HMM PF00085; match to protein family HMM PF02683.
aroQ protein networkhttps://string-db.org/network/246195.DNO_04193-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
accB protein networkhttps://string-db.org/network/246195.DNO_0420acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...]
accC protein networkhttps://string-db.org/network/246195.DNO_0421acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein [...]
prmA protein networkhttps://string-db.org/network/246195.DNO_0422Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
DNO_0423 protein networkhttps://string-db.org/network/246195.DNO_0423Dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belon [...]
DNO_0424 protein networkhttps://string-db.org/network/246195.DNO_0424Hypothetical protein; Identified by Glimmer2; putative.
DNO_0425 protein networkhttps://string-db.org/network/246195.DNO_0425Conserved hypothetical protein; Identified by match to protein family HMM PF02643.
DNO_0426 protein networkhttps://string-db.org/network/246195.DNO_0426Conserved hypothetical membrane protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
DNO_0427 protein networkhttps://string-db.org/network/246195.DNO_0427Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01578.
ffh protein networkhttps://string-db.org/network/246195.DNO_0428Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
DNO_0429 protein networkhttps://string-db.org/network/246195.DNO_0429Xaa-pro aminopeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF05195; Belongs to the peptidase M24B family.
DNO_0430 protein networkhttps://string-db.org/network/246195.DNO_0430Hypothetical protein; Identified by Glimmer2; putative.
xth-1 protein networkhttps://string-db.org/network/246195.DNO_0431Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
DNO_0432 protein networkhttps://string-db.org/network/246195.DNO_0432Hypothetical protein; Identified by Glimmer2; putative.
DNO_0433 protein networkhttps://string-db.org/network/246195.DNO_0433Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
pilS protein networkhttps://string-db.org/network/246195.DNO_0434Two-componenent sensor PilS; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
pilR protein networkhttps://string-db.org/network/246195.DNO_0435Two-component response regulator PilR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.
murB protein networkhttps://string-db.org/network/246195.DNO_0436UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
DNO_0437 protein networkhttps://string-db.org/network/246195.DNO_0437Haloacid dehalogenase-like hydrolase family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
DNO_0438 protein networkhttps://string-db.org/network/246195.DNO_0438Conserved hypothetical protein; Identified by match to protein family HMM PF06155.
ubiE protein networkhttps://string-db.org/network/246195.DNO_0439Ubiquinone-menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methox [...]
DNO_0440 protein networkhttps://string-db.org/network/246195.DNO_0440Conserved hypothetical protein; Identified by match to protein family HMM PF06843.
ubiB protein networkhttps://string-db.org/network/246195.DNO_04412-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfa [...]
tpl protein networkhttps://string-db.org/network/246195.DNO_0442Tryptophanase; Identified by match to protein family HMM PF01212; match to protein family HMM TIGR02618.
DNO_0443 protein networkhttps://string-db.org/network/246195.DNO_0443ABC transporter domain protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463.
DNO_0444 protein networkhttps://string-db.org/network/246195.DNO_0444ABC transporter domain protein; Identified by match to protein family HMM PF00005.
DNO_0445 protein networkhttps://string-db.org/network/246195.DNO_0445TetR family transcriptional regulator; Identified by match to protein family HMM PF00440.
DNO_0446 protein networkhttps://string-db.org/network/246195.DNO_0446RNA recognition motif protein; Identified by match to protein family HMM PF00076.
ackA protein networkhttps://string-db.org/network/246195.DNO_0447Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
pta protein networkhttps://string-db.org/network/246195.DNO_0448Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
tatA protein networkhttps://string-db.org/network/246195.DNO_0449Sec-independent protein translocase family protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine moti [...]
tatB protein networkhttps://string-db.org/network/246195.DNO_0450Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in th [...]
tatC protein networkhttps://string-db.org/network/246195.DNO_0451Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their sign [...]
DNO_0452 protein networkhttps://string-db.org/network/246195.DNO_0452Oligopeptide transport protein; Identified by match to protein family HMM PF00496.
DNO_0453 protein networkhttps://string-db.org/network/246195.DNO_0453Hypothetical protein; Identified by Glimmer2; putative.
DNO_0454 protein networkhttps://string-db.org/network/246195.DNO_0454Identified by match to protein family HMM PF00528.
DNO_0455 protein networkhttps://string-db.org/network/246195.DNO_0455Identified by match to protein family HMM PF00528.
DNO_0456 protein networkhttps://string-db.org/network/246195.DNO_0456ABC transporter domain protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
holC protein networkhttps://string-db.org/network/246195.DNO_0457DNA polymerase III chi subunit; Identified by match to protein family HMM PF04364.
DNO_0458 protein networkhttps://string-db.org/network/246195.DNO_0458Flavodoxin family protein.
DNO_0460 protein networkhttps://string-db.org/network/246195.DNO_0460Hypothetical lipoprotein.
DNO_0461 protein networkhttps://string-db.org/network/246195.DNO_0461Hypothetical protein; Identified by Glimmer2; putative.
DNO_0462 protein networkhttps://string-db.org/network/246195.DNO_0462Hypothetical lipoprotein.
DNO_0464 protein networkhttps://string-db.org/network/246195.DNO_0464Conserved hypothetical protein.
DNO_0465 protein networkhttps://string-db.org/network/246195.DNO_0465Hypothetical protein; Identified by Glimmer2; putative.
ispZ protein networkhttps://string-db.org/network/246195.DNO_0466Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
rsfS protein networkhttps://string-db.org/network/246195.DNO_0467Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 3 [...]
fbp protein networkhttps://string-db.org/network/246195.DNO_0468Fructose-1,6-bisphosphatase; Identified by match to protein family HMM PF00316.
DNO_0469 protein networkhttps://string-db.org/network/246195.DNO_0469AsnC family transcriptional regulator; Identified by match to protein family HMM PF01037.
nusB protein networkhttps://string-db.org/network/246195.DNO_0470Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...]
ribH protein networkhttps://string-db.org/network/246195.DNO_04716,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
ribB protein networkhttps://string-db.org/network/246195.DNO_04723,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
ribE protein networkhttps://string-db.org/network/246195.DNO_0473Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
ribD protein networkhttps://string-db.org/network/246195.DNO_0474Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...]
nrdR protein networkhttps://string-db.org/network/246195.DNO_0475Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
glyA protein networkhttps://string-db.org/network/246195.DNO_0476Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
scpA protein networkhttps://string-db.org/network/246195.DNO_0477Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from m [...]
DNO_0478 protein networkhttps://string-db.org/network/246195.DNO_0478Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from m [...]
rluB protein networkhttps://string-db.org/network/246195.DNO_0479Ribosomal large subunit pseudouridine synthase, RluB; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the [...]
lipA protein networkhttps://string-db.org/network/246195.DNO_0480Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, ther [...]
cmoA protein networkhttps://string-db.org/network/246195.DNO_0481Methyltransferase family protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
cmoB protein networkhttps://string-db.org/network/246195.DNO_0482Methyltransferase family protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 3 [...]
ftsK protein networkhttps://string-db.org/network/246195.DNO_0483Cell division protein, FtsK; Identified by match to protein family HMM PF01580.
DNO_0484 protein networkhttps://string-db.org/network/246195.DNO_0484LolA family outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if [...]
DNO_0485 protein networkhttps://string-db.org/network/246195.DNO_0485ATPase, AAA family domain protein; Identified by match to protein family HMM PF00004.
rplU protein networkhttps://string-db.org/network/246195.DNO_048650S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
rpmA protein networkhttps://string-db.org/network/246195.DNO_048750S ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
obg protein networkhttps://string-db.org/network/246195.DNO_0488GTP binding domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays [...]
DNO_0489 protein networkhttps://string-db.org/network/246195.DNO_0489Identified by match to protein family HMM PF00288.
pyrB protein networkhttps://string-db.org/network/246195.DNO_0490Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine c [...]
dtd protein networkhttps://string-db.org/network/246195.DNO_0491D-tyrosyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging [...]
maf-1 protein networkhttps://string-db.org/network/246195.DNO_0492Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides in [...]
rng protein networkhttps://string-db.org/network/246195.DNO_0493Ribonuclease g; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757.
DNO_0494 protein networkhttps://string-db.org/network/246195.DNO_0494Identified by match to protein family HMM PF00267.
DNO_0495 protein networkhttps://string-db.org/network/246195.DNO_0495Identified by match to protein family HMM PF00267; match to protein family HMM TIGR03304.
DNO_0496 protein networkhttps://string-db.org/network/246195.DNO_0496Hypothetical lipoprotein.
DNO_0497 protein networkhttps://string-db.org/network/246195.DNO_0497Identified by match to protein family HMM PF02470.
DNO_0499 protein networkhttps://string-db.org/network/246195.DNO_0499Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.
DNO_0500 protein networkhttps://string-db.org/network/246195.DNO_0500Hypothetical protein; Identified by Glimmer2; putative.
prfC protein networkhttps://string-db.org/network/246195.DNO_0501Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...]
DNO_0502 protein networkhttps://string-db.org/network/246195.DNO_0502Bacterial extracellular solute-binding family protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
DNO_0503 protein networkhttps://string-db.org/network/246195.DNO_0503Short chain dehydrogenase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; Belongs to the short-chain dehydroge [...]
mvaD protein networkhttps://string-db.org/network/246195.DNO_0504Diphosphomevalonate decarboxylase; Identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR01240.
DNO_0505 protein networkhttps://string-db.org/network/246195.DNO_0505Drug resistance transporter; Identified by match to protein family HMM PF07690.
fumC protein networkhttps://string-db.org/network/246195.DNO_0506Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamil [...]
dcd protein networkhttps://string-db.org/network/246195.DNO_0507Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
DNO_0508 protein networkhttps://string-db.org/network/246195.DNO_0508ATPase family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
aroE protein networkhttps://string-db.org/network/246195.DNO_0509Shhikimate 5-dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501.
hemB protein networkhttps://string-db.org/network/246195.DNO_0510Delta-aminolevulinic acid dehydratase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.
dsbA protein networkhttps://string-db.org/network/246195.DNO_0511Thiol:disulfide interchange protein DsbA; Identified by match to protein family HMM PF01323.
DNO_0512 protein networkhttps://string-db.org/network/246195.DNO_0512Conserved hypothetical protein; Identified by match to protein family HMM PF01636.
DNO_0513 protein networkhttps://string-db.org/network/246195.DNO_0513Identified by match to protein family HMM PF00483; match to protein family HMM PF01128.
rlmN protein networkhttps://string-db.org/network/246195.DNO_0514Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proo [...]
DNO_0515 protein networkhttps://string-db.org/network/246195.DNO_0515Type 4 fimbrial biogenesis protein; Identified by match to protein family HMM PF00515.
DNO_0516 protein networkhttps://string-db.org/network/246195.DNO_0516Conserved hypothetical protein.
hisS protein networkhttps://string-db.org/network/246195.DNO_0517histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.
DNO_0518 protein networkhttps://string-db.org/network/246195.DNO_0518Conserved hypothetical protein.
bamB protein networkhttps://string-db.org/network/246195.DNO_0519Quinonprotein alcohol dehydrogenase family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membran [...]
engA protein networkhttps://string-db.org/network/246195.DNO_0520GTP-binding family protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) [...]
DNO_0521 protein networkhttps://string-db.org/network/246195.DNO_0521Conserved hypothetical membrane protein; Identified by match to protein family HMM PF05684.
rpiA protein networkhttps://string-db.org/network/246195.DNO_0522Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
DNO_0523 protein networkhttps://string-db.org/network/246195.DNO_0523Conserved hypothetical protein; Identified by match to protein family HMM PF03937.
rplT protein networkhttps://string-db.org/network/246195.DNO_052450S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
rpmI protein networkhttps://string-db.org/network/246195.DNO_052550S ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
thrS protein networkhttps://string-db.org/network/246195.DNO_0527threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor en [...]
glmS protein networkhttps://string-db.org/network/246195.DNO_0528Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
DNO_0529 protein networkhttps://string-db.org/network/246195.DNO_0529Conserved hypothetical membrane protein.
DNO_0530 protein networkhttps://string-db.org/network/246195.DNO_0530Sulfatase domain protein; Identified by match to protein family HMM PF00884; match to protein family HMM PF08019.
DNO_0531 protein networkhttps://string-db.org/network/246195.DNO_0531Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
rpoN protein networkhttps://string-db.org/network/246195.DNO_0532RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
DNO_0533 protein networkhttps://string-db.org/network/246195.DNO_0533ABC transporter family ATP-binding protein; Identified by match to protein family HMM PF00005.
DNO_0534 protein networkhttps://string-db.org/network/246195.DNO_0534Identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002.
DNO_0535 protein networkhttps://string-db.org/network/246195.DNO_0535Hypothetical protein; Identified by Glimmer2; putative.
DNO_0536 protein networkhttps://string-db.org/network/246195.DNO_0536Arabinose 5-phosphate isomerase; Identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393.
gph protein networkhttps://string-db.org/network/246195.DNO_0537Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR0154 [...]
ubiG protein networkhttps://string-db.org/network/246195.DNO_0538Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. Ubi [...]
DNO_0539 protein networkhttps://string-db.org/network/246195.DNO_0539Hypothetical protein; Identified by Glimmer2; putative.
rpe protein networkhttps://string-db.org/network/246195.DNO_0540Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
birA protein networkhttps://string-db.org/network/246195.DNO_0541biotin-acetyl-CoA-carboxylase ligase; Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121.
coaX protein networkhttps://string-db.org/network/246195.DNO_0542Bvg accessory factor family protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
DNO_0543 protein networkhttps://string-db.org/network/246195.DNO_0543Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
aceE protein networkhttps://string-db.org/network/246195.DNO_0544Pyruvate dehydrogenase e1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
aceF protein networkhttps://string-db.org/network/246195.DNO_0545Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
DNO_0546 protein networkhttps://string-db.org/network/246195.DNO_0546Outer membrane efflux family protein; Identified by match to protein family HMM PF02321.
DNO_0547 protein networkhttps://string-db.org/network/246195.DNO_0547Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR03375.
nth protein networkhttps://string-db.org/network/246195.DNO_0548Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...]
DNO_0549 protein networkhttps://string-db.org/network/246195.DNO_0549Type I secretion membrane fusion protein; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843.
rnfE protein networkhttps://string-db.org/network/246195.DNO_0550Electron transport complex protein, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfG protein networkhttps://string-db.org/network/246195.DNO_0551Electron transport complex protein, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
rnfD protein networkhttps://string-db.org/network/246195.DNO_0552Electron transport complex protein, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
rnfC protein networkhttps://string-db.org/network/246195.DNO_0553Electron transport complex protein, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type [...]
rnfB protein networkhttps://string-db.org/network/246195.DNO_0554Electron transport complex protein, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type [...]
rnfA protein networkhttps://string-db.org/network/246195.DNO_0555Electron transport complex protein, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
DNO_0556 protein networkhttps://string-db.org/network/246195.DNO_0556Conserved hypothetical lipoprotein.
DNO_0557 protein networkhttps://string-db.org/network/246195.DNO_0557Alkyl hydroperoxide reductase/thiol specific antioxidant family protein; Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.
uvrB protein networkhttps://string-db.org/network/246195.DNO_0558Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...]
DNO_0559 protein networkhttps://string-db.org/network/246195.DNO_0559Glycosyl transferase family 8 protein; Identified by match to protein family HMM PF01501.
DNO_0560 protein networkhttps://string-db.org/network/246195.DNO_0560Hypothetical protein; Identified by Glimmer2; putative.
dapB protein networkhttps://string-db.org/network/246195.DNO_0561Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
DNO_0562 protein networkhttps://string-db.org/network/246195.DNO_0562Hypothetical protein; Identified by Glimmer2; putative.
lapB protein networkhttps://string-db.org/network/246195.DNO_0563Conserved hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of [...]
pyrF protein networkhttps://string-db.org/network/246195.DNO_0564Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
pssA protein networkhttps://string-db.org/network/246195.DNO_0565CDP-diacylglycerol--serine O- phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase [...]
DNO_0566 protein networkhttps://string-db.org/network/246195.DNO_0566Hypothetical protein; Identified by Glimmer2; putative.
DNO_0567 protein networkhttps://string-db.org/network/246195.DNO_0567Conserved hypothetical protein; Identified by match to protein family HMM PF08239.
lgt protein networkhttps://string-db.org/network/246195.DNO_0568Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
thyA protein networkhttps://string-db.org/network/246195.DNO_0569Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
DNO_0570 protein networkhttps://string-db.org/network/246195.DNO_0570Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domai [...]
DNO_0571 protein networkhttps://string-db.org/network/246195.DNO_0571TPR domain protein; Identified by match to protein family HMM PF00515.
DNO_0572 protein networkhttps://string-db.org/network/246195.DNO_0572Helicase domain protein.
DNO_0573 protein networkhttps://string-db.org/network/246195.DNO_0573Identified by match to protein family HMM PF00814.
DNO_0574 protein networkhttps://string-db.org/network/246195.DNO_0574Thioesterase family domain protein.
DNO_0575 protein networkhttps://string-db.org/network/246195.DNO_0575Conserved hypothetical protein; Identified by match to protein family HMM PF01926.
DNO_0576 protein networkhttps://string-db.org/network/246195.DNO_0576Conserved hypothetical protein; Identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231.
tldD protein networkhttps://string-db.org/network/246195.DNO_0577TldD protein; Identified by match to protein family HMM PF01523.
DNO_0578 protein networkhttps://string-db.org/network/246195.DNO_0578PmbA protein; Identified by match to protein family HMM PF01523.
tadA protein networkhttps://string-db.org/network/246195.DNO_0579Adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
DNO_0580 protein networkhttps://string-db.org/network/246195.DNO_0580Lipoprotein, putative.
DNO_0581 protein networkhttps://string-db.org/network/246195.DNO_0581Identified by match to protein family HMM PF02254.
DNO_0582 protein networkhttps://string-db.org/network/246195.DNO_0582Hydrolase, alpha-beta fold family protein; Identified by match to protein family HMM PF00561.
DNO_0583 protein networkhttps://string-db.org/network/246195.DNO_05831-phosphofructokinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family.
rluE protein networkhttps://string-db.org/network/246195.DNO_0584Ribosomal large subunit pseudouridine synthase, RluE; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.
trpC protein networkhttps://string-db.org/network/246195.DNO_0585Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family.
upp protein networkhttps://string-db.org/network/246195.DNO_0586Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
DNO_0587 protein networkhttps://string-db.org/network/246195.DNO_0587Hypothetical protein; Identified by Glimmer2; putative.
DNO_0588 protein networkhttps://string-db.org/network/246195.DNO_0588Conserved hypothetical protein.
DNO_0589 protein networkhttps://string-db.org/network/246195.DNO_0589Hypothetical membrane protein.
kamA protein networkhttps://string-db.org/network/246195.DNO_0590Lysine 2,3-aminomutase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238.
DNO_0591 protein networkhttps://string-db.org/network/246195.DNO_0591Hypothetical protein; Identified by Glimmer2; putative.
recJ protein networkhttps://string-db.org/network/246195.DNO_0592DNA exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.
DNO_0593 protein networkhttps://string-db.org/network/246195.DNO_0593Identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
DNO_0594 protein networkhttps://string-db.org/network/246195.DNO_0594Hypothetical protein; Identified by Glimmer2; putative.
hfq protein networkhttps://string-db.org/network/246195.DNO_0595Hfq RNA-binding protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and chang [...]
hflX protein networkhttps://string-db.org/network/246195.DNO_0596GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPa [...]
hflK protein networkhttps://string-db.org/network/246195.DNO_0597HflK protein; HflC and HflK could encode or regulate a protease.
hflC protein networkhttps://string-db.org/network/246195.DNO_0598HflC protein; HflC and HflK could regulate a protease.
DNO_0599 protein networkhttps://string-db.org/network/246195.DNO_0599Hypothetical protein; Identified by Glimmer2; putative.
purA protein networkhttps://string-db.org/network/246195.DNO_0600Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
rnr protein networkhttps://string-db.org/network/246195.DNO_0601Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
trmH protein networkhttps://string-db.org/network/246195.DNO_0602RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...]
aprV5 protein networkhttps://string-db.org/network/246195.DNO_0603Acidic extracellular subtilisin-like protease precursor AprV5; Identified by match to protein family HMM PF00082; match to protein family HMM PF01483; Belongs to the peptidase S8 family.
DNO_0604 protein networkhttps://string-db.org/network/246195.DNO_0604lysyl-RNA synthetase; Identified by match to protein family HMM PF00152.
bprV protein networkhttps://string-db.org/network/246195.DNO_0605Basic extracellular subtilisin-like protease precursor BprV; Identified by match to protein family HMM PF00082; match to protein family HMM PF01483; Belongs to the peptidase S8 family.
DNO_0606 protein networkhttps://string-db.org/network/246195.DNO_0606Bacterial extracellular solute-binding family protein; Identified by match to protein family HMM PF00497.
nrdA protein networkhttps://string-db.org/network/246195.DNO_0607Ribonucleotide reductase, alpha subunit; Identified by match to protein family HMM PF02867; match to protein family HMM TIGR02510.
DNO_0608 protein networkhttps://string-db.org/network/246195.DNO_0608Ribonucleotide reductase, beta subunit; Identified by match to protein family HMM PF00268.
smc protein networkhttps://string-db.org/network/246195.DNO_0609Chromosome segregation SMC family protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
DNO_0610 protein networkhttps://string-db.org/network/246195.DNO_0610PTS system, fructose IIC subunit; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR0082 [...]
aroK protein networkhttps://string-db.org/network/246195.DNO_0611Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
gyrB protein networkhttps://string-db.org/network/246195.DNO_0612DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
yfiA protein networkhttps://string-db.org/network/246195.DNO_0614Sigma-54 modulation protein/S30EA ribosomal family protein; Identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741.
DNO_0615 protein networkhttps://string-db.org/network/246195.DNO_0615Hypothetical lipoprotein.
DNO_0616 protein networkhttps://string-db.org/network/246195.DNO_0616Conserved hypothetical protein.
DNO_0617 protein networkhttps://string-db.org/network/246195.DNO_0617Hypothetical protein; Identified by Glimmer2; putative.
ndh protein networkhttps://string-db.org/network/246195.DNO_0618NADH dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
sdaA protein networkhttps://string-db.org/network/246195.DNO_0619L-serine dehydratase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; Belongs to the iron-sulfur dependent L-serine [...]
DNO_0620 protein networkhttps://string-db.org/network/246195.DNO_0620Hypothetical protein; Identified by Glimmer2; putative.
DNO_0621 protein networkhttps://string-db.org/network/246195.DNO_0621Hypothetical protein; Identified by Glimmer2; putative.
hrpA protein networkhttps://string-db.org/network/246195.DNO_0622ATP-dependent helicase HrpA; Identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967.
DNO_0623 protein networkhttps://string-db.org/network/246195.DNO_0623Hypothetical lipoprotein.
pfs protein networkhttps://string-db.org/network/246195.DNO_0624MTA-SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thio [...]
DNO_0625 protein networkhttps://string-db.org/network/246195.DNO_0625Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
mdoH protein networkhttps://string-db.org/network/246195.DNO_0626Glycosyltransferase MdoH; Identified by match to protein family HMM PF00535.
trmU protein networkhttps://string-db.org/network/246195.DNO_0627tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
DNO_0628 protein networkhttps://string-db.org/network/246195.DNO_0628Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/deph [...]
hflD protein networkhttps://string-db.org/network/246195.DNO_0629Conserved hypothetical protein; Identified by match to protein family HMM PF04356.
ppsA protein networkhttps://string-db.org/network/246195.DNO_0630Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
ung protein networkhttps://string-db.org/network/246195.DNO_0631uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
DNO_0632 protein networkhttps://string-db.org/network/246195.DNO_0632Lipoprotein, putative.
DNO_0633 protein networkhttps://string-db.org/network/246195.DNO_0633Lytic murein transglycosylase; Identified by match to protein family HMM PF01464.
DNO_0634 protein networkhttps://string-db.org/network/246195.DNO_0634Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
DNO_0635 protein networkhttps://string-db.org/network/246195.DNO_0635Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
DNO_0636 protein networkhttps://string-db.org/network/246195.DNO_0636Hypothetical protein; Identified by Glimmer2; putative.
telA protein networkhttps://string-db.org/network/246195.DNO_0637Toxic anion resistance protein; Identified by match to protein family HMM PF05816; Belongs to the TelA family.
DNO_0638 protein networkhttps://string-db.org/network/246195.DNO_0638Hypothetical membrane protein.
DNO_0639 protein networkhttps://string-db.org/network/246195.DNO_0639Conserved hypothetical protein; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.
yfeD protein networkhttps://string-db.org/network/246195.DNO_0640ABC iron transporter permease YfeD; Identified by match to protein family HMM PF00950.
rsmI protein networkhttps://string-db.org/network/246195.DNO_0641Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
yfeC protein networkhttps://string-db.org/network/246195.DNO_0642ABC iron transporter YfeC; Identified by match to protein family HMM PF00950.
yfeB protein networkhttps://string-db.org/network/246195.DNO_0643ABC iron transporter ATP-binding protein YfeB; Identified by match to protein family HMM PF00005.
yfeA protein networkhttps://string-db.org/network/246195.DNO_0644Periplasmic iron-binding protein YfeA; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
gmk protein networkhttps://string-db.org/network/246195.DNO_0645Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
DNO_0646 protein networkhttps://string-db.org/network/246195.DNO_0646Identified by match to protein family HMM PF00425; match to protein family HMM PF01063.
mutY protein networkhttps://string-db.org/network/246195.DNO_0647A-G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
ispA protein networkhttps://string-db.org/network/246195.DNO_0648Geranyltranstransferase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
rsgA protein networkhttps://string-db.org/network/246195.DNO_0649Conserved hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May [...]
DNO_0650 protein networkhttps://string-db.org/network/246195.DNO_0650VacJ-like lipoprotein; Identified by match to protein family HMM PF04333.
DNO_0651 protein networkhttps://string-db.org/network/246195.DNO_0651Conserved hypothetical membrane protein; Identified by match to protein family HMM PF01594.
DNO_0652 protein networkhttps://string-db.org/network/246195.DNO_0652Modification methylase, HemK family; Identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM TIGR00536; Belongs to the protein N5-gluta [...]
DNO_0653 protein networkhttps://string-db.org/network/246195.DNO_0653Glutamine amidotransferase; Identified by match to protein family HMM PF00117; match to protein family HMM PF07722.
DNO_0654 protein networkhttps://string-db.org/network/246195.DNO_0654Identified by match to protein family HMM PF03553.
clpA protein networkhttps://string-db.org/network/246195.DNO_0655ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein [...]
clpS protein networkhttps://string-db.org/network/246195.DNO_0656ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
pyrC protein networkhttps://string-db.org/network/246195.DNO_0657Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
rppH protein networkhttps://string-db.org/network/246195.DNO_0658NUDIX hydrolase domain protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state th [...]
DNO_0659 protein networkhttps://string-db.org/network/246195.DNO_0659Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
DNO_0660 protein networkhttps://string-db.org/network/246195.DNO_0660Hypothetical protein; Identified by Glimmer2; putative.
cmoM protein networkhttps://string-db.org/network/246195.DNO_0661S-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to [...]
DNO_0662 protein networkhttps://string-db.org/network/246195.DNO_0662Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801.
rdgB protein networkhttps://string-db.org/network/246195.DNO_0663Ham1-like protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XT [...]
rph protein networkhttps://string-db.org/network/246195.DNO_0664Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucl [...]
DNO_0665 protein networkhttps://string-db.org/network/246195.DNO_0665Conserved hypothetical protein; Identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.
dsbB protein networkhttps://string-db.org/network/246195.DNO_0666Thiol:disulfide interchange protein DsbB; Identified by match to protein family HMM PF02600.
purB protein networkhttps://string-db.org/network/246195.DNO_0667Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM PF08328; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccin [...]
pgpA protein networkhttps://string-db.org/network/246195.DNO_0668Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
pyrD protein networkhttps://string-db.org/network/246195.DNO_0669Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
serC protein networkhttps://string-db.org/network/246195.DNO_0670Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs t [...]
DNO_0671 protein networkhttps://string-db.org/network/246195.DNO_0671Hypothetical protein; Identified by Glimmer2; putative.
gidA protein networkhttps://string-db.org/network/246195.DNO_0672Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
DNO_0673 protein networkhttps://string-db.org/network/246195.DNO_0673Conserved hypothetical protein; Identified by match to protein family HMM PF02325.
proC protein networkhttps://string-db.org/network/246195.DNO_0674Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
pilT protein networkhttps://string-db.org/network/246195.DNO_0675Twitching motility protein PilT; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.
pilU protein networkhttps://string-db.org/network/246195.DNO_0676Twitching motility protein PilU; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.
parE protein networkhttps://string-db.org/network/246195.DNO_0677DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circul [...]
parC protein networkhttps://string-db.org/network/246195.DNO_0678DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circul [...]
DNO_0679 protein networkhttps://string-db.org/network/246195.DNO_0679Identified by match to protein family HMM PF00755.
aat protein networkhttps://string-db.org/network/246195.DNO_0680leucyl-phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-te [...]
bamA protein networkhttps://string-db.org/network/246195.DNO_0681Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
DNO_0682 protein networkhttps://string-db.org/network/246195.DNO_0682Identified by match to protein family HMM PF03938.
lpxD protein networkhttps://string-db.org/network/246195.DNO_0683UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of li [...]
fabZ protein networkhttps://string-db.org/network/246195.DNO_0684Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...]
lpxA protein networkhttps://string-db.org/network/246195.DNO_0685acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
lpxB protein networkhttps://string-db.org/network/246195.DNO_0686lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
rnhB protein networkhttps://string-db.org/network/246195.DNO_0687Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
dnaE protein networkhttps://string-db.org/network/246195.DNO_0688DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR005 [...]
mfd protein networkhttps://string-db.org/network/246195.DNO_0689Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
DNO_0690 protein networkhttps://string-db.org/network/246195.DNO_0690Hypothetical protein; Identified by Glimmer2; putative.
era protein networkhttps://string-db.org/network/246195.DNO_0691GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
rnc protein networkhttps://string-db.org/network/246195.DNO_0692Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
lepB protein networkhttps://string-db.org/network/246195.DNO_0693Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
lepA protein networkhttps://string-db.org/network/246195.DNO_0694GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
DNO_0695 protein networkhttps://string-db.org/network/246195.DNO_0695Conserved hypothetical protein; Identified by match to protein family HMM PF07670.
DNO_0696 protein networkhttps://string-db.org/network/246195.DNO_0696Conserved hypothetical membrane protein; Identified by match to protein family HMM PF07670.
DNO_0697 protein networkhttps://string-db.org/network/246195.DNO_0697Peptidase M20 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
DNO_0698 protein networkhttps://string-db.org/network/246195.DNO_0698Identified by match to protein family HMM PF00916; match to protein family HMM PF01740.
deoD protein networkhttps://string-db.org/network/246195.DNO_0699Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107.
DNO_0700 protein networkhttps://string-db.org/network/246195.DNO_0700Conserved hypothetical lipoprotein.
glyQ protein networkhttps://string-db.org/network/246195.DNO_0701glycyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388.
glyS protein networkhttps://string-db.org/network/246195.DNO_0702glycyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.
DNO_0703 protein networkhttps://string-db.org/network/246195.DNO_0703PTS system, fructose IIA component; Identified by match to protein family HMM PF03610.
DNO_0704 protein networkhttps://string-db.org/network/246195.DNO_0704Conserved hypothetical protein; Identified by match to protein family HMM PF04074; match to protein family HMM TIGR00022.
DNO_0705 protein networkhttps://string-db.org/network/246195.DNO_0705ROK family protein; Identified by match to protein family HMM PF00480.
gpmA protein networkhttps://string-db.org/network/246195.DNO_0706Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
zur protein networkhttps://string-db.org/network/246195.DNO_0707Zinc uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
trmL protein networkhttps://string-db.org/network/246195.DNO_0708rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-ad [...]
menA protein networkhttps://string-db.org/network/246195.DNO_07091,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
DNO_0711 protein networkhttps://string-db.org/network/246195.DNO_0711Anaerobic c4-dicarboxylate membrane transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1 [...]
fimV protein networkhttps://string-db.org/network/246195.DNO_0712Type IV fimbrial biogenesis protein FimV.
DNO_0713 protein networkhttps://string-db.org/network/246195.DNO_0713Hypothetical protein; Identified by Glimmer2; putative.
DNO_0714 protein networkhttps://string-db.org/network/246195.DNO_0714Identified by match to protein family HMM PF02230.
DNO_0715 protein networkhttps://string-db.org/network/246195.DNO_0715Hypothetical protein; Identified by Glimmer2; putative.
DNO_0716 protein networkhttps://string-db.org/network/246195.DNO_0716Membrane-associated zinc metalloprotease, M50 family; Identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054.
DNO_0717 protein networkhttps://string-db.org/network/246195.DNO_0717Conserved hypothetical protein; Belongs to the UPF0149 family.
cdsA protein networkhttps://string-db.org/network/246195.DNO_0718Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
uppS protein networkhttps://string-db.org/network/246195.DNO_0719Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,3 [...]
frr protein networkhttps://string-db.org/network/246195.DNO_0720Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/246195.DNO_0721Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
tsf protein networkhttps://string-db.org/network/246195.DNO_0722Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the [...]
rpsB protein networkhttps://string-db.org/network/246195.DNO_0723Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.
map protein networkhttps://string-db.org/network/246195.DNO_0724Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
DNO_0725 protein networkhttps://string-db.org/network/246195.DNO_0725Potential adhesin complex protein.
DNO_0726 protein networkhttps://string-db.org/network/246195.DNO_0726Hypothetical protein; Identified by Glimmer2; putative.
DNO_0727 protein networkhttps://string-db.org/network/246195.DNO_0727TatD family deoxyribonuclease; Identified by match to protein family HMM PF01026.
DNO_0728 protein networkhttps://string-db.org/network/246195.DNO_0728Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.
DNO_0729 protein networkhttps://string-db.org/network/246195.DNO_0729Hypothetical protein; Identified by Glimmer2; putative.
DNO_0730 protein networkhttps://string-db.org/network/246195.DNO_0730ABC transporter family ATP-binding protein; Identified by match to protein family HMM PF00005.
gltX protein networkhttps://string-db.org/network/246195.DNO_0734glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
DNO_0735 protein networkhttps://string-db.org/network/246195.DNO_0735Lactoylglutathione lyase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068.
rho protein networkhttps://string-db.org/network/246195.DNO_0736Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
trxA protein networkhttps://string-db.org/network/246195.DNO_0737Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
DNO_0738 protein networkhttps://string-db.org/network/246195.DNO_0738Hypothetical protein; Identified by Glimmer2; putative.
DNO_0739 protein networkhttps://string-db.org/network/246195.DNO_0739Conserved hypothetical membrane protein; Identified by match to protein family HMM PF05838.
DNO_0740 protein networkhttps://string-db.org/network/246195.DNO_0740Hypothetical protein; Identified by Glimmer2; putative.
DNO_0741 protein networkhttps://string-db.org/network/246195.DNO_0741Hypothetical protein; Identified by Glimmer2; putative.
DNO_0742 protein networkhttps://string-db.org/network/246195.DNO_0742Hypothetical protein; Identified by Glimmer2; putative.
DNO_0743 protein networkhttps://string-db.org/network/246195.DNO_0743Phage terminase, large subunit; Identified by match to protein family HMM PF04466; match to protein family HMM TIGR01547.
DNO_0745 protein networkhttps://string-db.org/network/246195.DNO_0745Phage virion morphogenesis-like protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.
DNO_0746 protein networkhttps://string-db.org/network/246195.DNO_0746Hypothetical protein; Identified by Glimmer2; putative.
DNO_0747 protein networkhttps://string-db.org/network/246195.DNO_0747Hypothetical protein; Identified by Glimmer2; putative.
DNO_0748 protein networkhttps://string-db.org/network/246195.DNO_0748Conserved hypothetical protein.
DNO_0749 protein networkhttps://string-db.org/network/246195.DNO_0749Conserved hypothetical protein; Identified by match to protein family HMM PF07030.
DNO_0750 protein networkhttps://string-db.org/network/246195.DNO_0750Phage virion morphogenesis-like protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635.
DNO_0751 protein networkhttps://string-db.org/network/246195.DNO_0751Hypothetical protein; Identified by Glimmer2; putative.
DNO_0752 protein networkhttps://string-db.org/network/246195.DNO_0752Conserved hypothetical protein.
DNO_0753 protein networkhttps://string-db.org/network/246195.DNO_0753Hypothetical protein; Identified by Glimmer2; putative.
DNO_0754 protein networkhttps://string-db.org/network/246195.DNO_0754Hypothetical protein; Identified by Glimmer2; putative.
DNO_0755 protein networkhttps://string-db.org/network/246195.DNO_0755Phage tail tape measure family protein; Identified by match to protein family HMM TIGR01760.
DNO_0756 protein networkhttps://string-db.org/network/246195.DNO_0756Conserved hypothetical protein.
DNO_0757 protein networkhttps://string-db.org/network/246195.DNO_0757Conserved hypothetical protein.
DNO_0758 protein networkhttps://string-db.org/network/246195.DNO_0758Conserved hypothetical protein.
DNO_0759 protein networkhttps://string-db.org/network/246195.DNO_0759Hypothetical protein; Identified by Glimmer2; putative.
DNO_0760 protein networkhttps://string-db.org/network/246195.DNO_0760Conserved hypothetical protein.
DNO_0761 protein networkhttps://string-db.org/network/246195.DNO_0761Hypothetical protein; Identified by Glimmer2; putative.
DNO_0762 protein networkhttps://string-db.org/network/246195.DNO_0762Hypothetical protein; Identified by Glimmer2; putative.
DNO_0763 protein networkhttps://string-db.org/network/246195.DNO_0763Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.
DNO_0764 protein networkhttps://string-db.org/network/246195.DNO_0764Hypothetical protein; Identified by Glimmer2; putative.
DNO_0765 protein networkhttps://string-db.org/network/246195.DNO_0765Hypothetical protein; Identified by Glimmer2; putative.
DNO_0766 protein networkhttps://string-db.org/network/246195.DNO_0766Hypothetical protein; Identified by Glimmer2; putative.
ssb-2 protein networkhttps://string-db.org/network/246195.DNO_0767Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
DNO_0768 protein networkhttps://string-db.org/network/246195.DNO_0768Conserved hypothetical protein.
DNO_0769 protein networkhttps://string-db.org/network/246195.DNO_0769Bacteriophage recombination function protein; Identified by match to protein family HMM PF04404.
DNO_0770 protein networkhttps://string-db.org/network/246195.DNO_0770Hypothetical protein; Identified by Glimmer2; putative.
DNO_0771 protein networkhttps://string-db.org/network/246195.DNO_0771Hypothetical protein; Identified by Glimmer2; putative.
DNO_0772 protein networkhttps://string-db.org/network/246195.DNO_0772Conserved hypothetical protein.
regA2 protein networkhttps://string-db.org/network/246195.DNO_0773Regulatory protein RegA2; Identified by match to protein family HMM PF00717; match to protein family HMM PF01381.
DNO_0774 protein networkhttps://string-db.org/network/246195.DNO_0774Hypothetical protein; Identified by Glimmer2; putative.
DNO_0775 protein networkhttps://string-db.org/network/246195.DNO_0775Conserved hypothetical protein.
dnaC protein networkhttps://string-db.org/network/246195.DNO_0776DNA replication protein DnaC; Identified by match to protein family HMM PF01695.
DNO_0780 protein networkhttps://string-db.org/network/246195.DNO_0780Endodeoxyribonuclease RusA family; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selectiv [...]
DNO_0781 protein networkhttps://string-db.org/network/246195.DNO_0781Hypothetical protein; Identified by Glimmer2; putative.
DNO_0782 protein networkhttps://string-db.org/network/246195.DNO_0782Conserved hypothetical protein.
DNO_0783 protein networkhttps://string-db.org/network/246195.DNO_0783Hypothetical protein; Identified by Glimmer2; putative.
DNO_0784 protein networkhttps://string-db.org/network/246195.DNO_0784Bacteriophage P4-like integrase; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
DNO_0785 protein networkhttps://string-db.org/network/246195.DNO_0785Metallo-hydrolase family protein.
DNO_0786 protein networkhttps://string-db.org/network/246195.DNO_0786Identified by match to protein family HMM PF02566.
DNO_0787 protein networkhttps://string-db.org/network/246195.DNO_0787Multidrug efflux protein; Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
DNO_0788 protein networkhttps://string-db.org/network/246195.DNO_0788MarR family transcriptional regulator; Identified by match to protein family HMM PF01047.
folA protein networkhttps://string-db.org/network/246195.DNO_0789Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
DNO_0790 protein networkhttps://string-db.org/network/246195.DNO_0790Hypothetical protein; Identified by Glimmer2; putative.
DNO_0791 protein networkhttps://string-db.org/network/246195.DNO_0791O-antigen ligase; Identified by match to protein family HMM PF04932.
msrA-B protein networkhttps://string-db.org/network/246195.DNO_0792Methionine sulfoxide reductase MsrA-B; Identified by match to protein family HMM PF01625; match to protein family HMM PF01641; match to protein family HMM TIGR00357.
DNO_0794 protein networkhttps://string-db.org/network/246195.DNO_0794Identified by match to protein family HMM PF04011.
DNO_0795 protein networkhttps://string-db.org/network/246195.DNO_0795Identified by match to protein family HMM PF01435.
mgtE protein networkhttps://string-db.org/network/246195.DNO_0796Magnesium transporter; Acts as a magnesium transporter.
DNO_0797 protein networkhttps://string-db.org/network/246195.DNO_0797Hydroxymethylglutaryl-coenzyme A reductase; Identified by match to protein family HMM PF00368.
fni protein networkhttps://string-db.org/network/246195.DNO_0798Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, [...]
DNO_0799 protein networkhttps://string-db.org/network/246195.DNO_0799hydroxymethylglutaryl-CoA synthase; Identified by match to protein family HMM PF01154; match to protein family HMM PF08540; match to protein family HMM TIGR01835.
DNO_0800 protein networkhttps://string-db.org/network/246195.DNO_0800Identified by match to protein family HMM PF00288.
DNO_0801 protein networkhttps://string-db.org/network/246195.DNO_0801Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC [...]
DNO_0802 protein networkhttps://string-db.org/network/246195.DNO_0802Identified by match to protein family HMM PF01734.
DNO_0803 protein networkhttps://string-db.org/network/246195.DNO_0803Inositol monophosphatase; Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.
DNO_0804 protein networkhttps://string-db.org/network/246195.DNO_0804Conserved hypothetical protein.
DNO_0805 protein networkhttps://string-db.org/network/246195.DNO_0805Thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target f [...]
nqrF protein networkhttps://string-db.org/network/246195.DNO_0806NADH:ubiquinone oxidoreductase, Na(+)- translocating, F subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
nqrE protein networkhttps://string-db.org/network/246195.DNO_0807NADH:ubiquinone oxidoreductase, Na(+)- translocating, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
nqrD protein networkhttps://string-db.org/network/246195.DNO_0808NADH:ubiquinone oxidoreductase, Na(+)- translocating, D subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
nqrC protein networkhttps://string-db.org/network/246195.DNO_0809NADH:ubiquinone oxidoreductase, Na(+)- translocating, C subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
nqrB protein networkhttps://string-db.org/network/246195.DNO_0810NADH:ubiquinone oxidoreductase, Na(+)- translocating, B subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
nqrA protein networkhttps://string-db.org/network/246195.DNO_0811NADH:ubiquinone oxidoreductase, Na(+)- translocating, A subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) [...]
DNO_0813 protein networkhttps://string-db.org/network/246195.DNO_0813Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
tpiA protein networkhttps://string-db.org/network/246195.DNO_0814Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
glmM protein networkhttps://string-db.org/network/246195.DNO_0815Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
nhaA protein networkhttps://string-db.org/network/246195.DNO_0816Na+-H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
dapD protein networkhttps://string-db.org/network/246195.DNO_08172,3,4,5-tetrahydropyridine-2-carboxylate N- succinyltransferase; Identified by match to protein family HMM TIGR00965; Belongs to the transferase hexapeptide repeat family.
queF protein networkhttps://string-db.org/network/246195.DNO_0818GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 s [...]
DNO_0819 protein networkhttps://string-db.org/network/246195.DNO_0819Two-component phosphate sensor PhoR; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518.
DNO_0820 protein networkhttps://string-db.org/network/246195.DNO_0820Conserved hypothetical membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) fami [...]
DNO_0821 protein networkhttps://string-db.org/network/246195.DNO_0821Response regulator receiver domain protein; Identified by match to protein family HMM PF00072.
DNO_0822 protein networkhttps://string-db.org/network/246195.DNO_0822Response regulator receiver domain protein-DNA repair protein RadC; Identified by match to protein family HMM PF00072; match to protein family HMM PF04002; match to protein family HMM TIGR00608; [...]
coaBC protein networkhttps://string-db.org/network/246195.DNO_0823Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantoth [...]
dut protein networkhttps://string-db.org/network/246195.DNO_0824Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intrace [...]
grpE protein networkhttps://string-db.org/network/246195.DNO_0825Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...]
dnaK protein networkhttps://string-db.org/network/246195.DNO_0826Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
dnaJ protein networkhttps://string-db.org/network/246195.DNO_0827Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
agcS protein networkhttps://string-db.org/network/246195.DNO_0828Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835.
DNO_0829 protein networkhttps://string-db.org/network/246195.DNO_0829Oxidoreductase, aldo-keto reductase family; Identified by match to protein family HMM PF00248.
DNO_0830 protein networkhttps://string-db.org/network/246195.DNO_0830acyl-CoA thioester hydrolase; Identified by match to protein family HMM PF03061.
DNO_0831 protein networkhttps://string-db.org/network/246195.DNO_0831Bacterial extracellular solute-binding family protein; Belongs to the bacterial solute-binding protein 3 family.
DNO_0832 protein networkhttps://string-db.org/network/246195.DNO_0832Conserved hypothetical protein; Identified by match to protein family HMM PF01883.
DNO_0833 protein networkhttps://string-db.org/network/246195.DNO_0833SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
sufS protein networkhttps://string-db.org/network/246195.DNO_0834Cysteine desulfurase SufS; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
sufD protein networkhttps://string-db.org/network/246195.DNO_0835SufD protein; Identified by match to protein family HMM PF01458.
sufC protein networkhttps://string-db.org/network/246195.DNO_0836FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
sufB protein networkhttps://string-db.org/network/246195.DNO_0837FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
DNO_0838 protein networkhttps://string-db.org/network/246195.DNO_0838Identified by match to protein family HMM PF02082; match to protein family HMM PF08279; match to protein family HMM TIGR00738; match to protein family HMM TIGR02944.
DNO_0839 protein networkhttps://string-db.org/network/246195.DNO_0839Identified by match to protein family HMM PF01841.
DNO_0840 protein networkhttps://string-db.org/network/246195.DNO_0840Hypothetical protein; Identified by Glimmer2; putative.
DNO_0841 protein networkhttps://string-db.org/network/246195.DNO_0841Conserved hypothetical protein; Identified by match to protein family HMM PF01882.
DNO_0842 protein networkhttps://string-db.org/network/246195.DNO_0842Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
lpxK protein networkhttps://string-db.org/network/246195.DNO_0843Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...]
DNO_0844 protein networkhttps://string-db.org/network/246195.DNO_0844NUDIX hydrolase domain protein; Identified by match to protein family HMM PF00293.
DNO_0847 protein networkhttps://string-db.org/network/246195.DNO_0847Hypothetical protein; Identified by Glimmer2; putative.
DNO_0848 protein networkhttps://string-db.org/network/246195.DNO_0848D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyaci [...]
DNO_0849 protein networkhttps://string-db.org/network/246195.DNO_0849Identified by match to protein family HMM PF01914.
DNO_0850 protein networkhttps://string-db.org/network/246195.DNO_0850Identified by match to protein family HMM PF04386.
DNO_0851 protein networkhttps://string-db.org/network/246195.DNO_0851Identified by match to protein family HMM PF02798.
DNO_0852 protein networkhttps://string-db.org/network/246195.DNO_0852Conserved hypothetical protein; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486.
murA protein networkhttps://string-db.org/network/246195.DNO_0853UDP-N-acetylglucosamine 1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
DNO_0854 protein networkhttps://string-db.org/network/246195.DNO_0854Identified by match to protein family HMM PF01722; Belongs to the BolA/IbaG family.
DNO_0855 protein networkhttps://string-db.org/network/246195.DNO_0855Hypothetical protein; Identified by Glimmer2; putative.
DNO_0856 protein networkhttps://string-db.org/network/246195.DNO_0856Identified by match to protein family HMM PF05494.
DNO_0857 protein networkhttps://string-db.org/network/246195.DNO_0857Identified by match to protein family HMM PF02470.
DNO_0858 protein networkhttps://string-db.org/network/246195.DNO_0858Conserved hypothetical membrane protein; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056.
DNO_0859 protein networkhttps://string-db.org/network/246195.DNO_0859ABC transporter family ATP-binding protein; Identified by match to protein family HMM PF00005.
DNO_0860 protein networkhttps://string-db.org/network/246195.DNO_0860Conserved hypothetical protein; Identified by match to protein family HMM PF04357.
DNO_0861 protein networkhttps://string-db.org/network/246195.DNO_0861Outer membrane protein; Identified by match to protein family HMM PF01103.
mviN protein networkhttps://string-db.org/network/246195.DNO_0862Virulence factor MviN family protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
metF protein networkhttps://string-db.org/network/246195.DNO_08635,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family.
DNO_0864 protein networkhttps://string-db.org/network/246195.DNO_0864Hypothetical lipoprotein.
rhlB protein networkhttps://string-db.org/network/246195.DNO_0865ATP-dependent rna helicase Rhl; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. Rhl [...]
DNO_0866 protein networkhttps://string-db.org/network/246195.DNO_0866Identified by match to protein family HMM PF00881.
DNO_0867 protein networkhttps://string-db.org/network/246195.DNO_0867Conserved hypothetical protein.
DNO_0868 protein networkhttps://string-db.org/network/246195.DNO_0868Two-component response regulator; Identified by match to protein family HMM PF00072.
DNO_0869 protein networkhttps://string-db.org/network/246195.DNO_0869Two-component sensor kinase; Identified by match to protein family HMM PF01627; match to protein family HMM PF02518.
DNO_0870 protein networkhttps://string-db.org/network/246195.DNO_0870Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
DNO_0871 protein networkhttps://string-db.org/network/246195.DNO_0871Macrolide-specific ABC-type efflux protein; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) famil [...]
macB protein networkhttps://string-db.org/network/246195.DNO_0872Macrolide-specific ABC-type efflux carrier protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form [...]
DNO_0873 protein networkhttps://string-db.org/network/246195.DNO_0873Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF04972.
aspA protein networkhttps://string-db.org/network/246195.DNO_0874Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00839.
ftsY protein networkhttps://string-db.org/network/246195.DNO_0875Signal recognition particle FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recogniti [...]
rpoH protein networkhttps://string-db.org/network/246195.DNO_0876RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involve [...]
fur protein networkhttps://string-db.org/network/246195.DNO_0877Ferric uptake regulator; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
DNO_0878 protein networkhttps://string-db.org/network/246195.DNO_0878Hypothetical protein; Identified by Glimmer2; putative.
DNO_0879 protein networkhttps://string-db.org/network/246195.DNO_0879Conserved hypothetical protein; Identified by match to protein family HMM PF04391.
DNO_0880 protein networkhttps://string-db.org/network/246195.DNO_0880Identified by match to protein family HMM PF01226.
DNO_0881 protein networkhttps://string-db.org/network/246195.DNO_0881Conserved hypothetical protein.
DNO_0888 protein networkhttps://string-db.org/network/246195.DNO_0888Identified by match to protein family HMM PF01075.
znuA protein networkhttps://string-db.org/network/246195.DNO_0889High-affinity zinc uptake system protein; Identified by match to protein family HMM PF01297.
DNO_0890 protein networkhttps://string-db.org/network/246195.DNO_0890Type IV fimbrial biogenesis protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
DNO_0891 protein networkhttps://string-db.org/network/246195.DNO_0891Type IV fimbrial biogenesis protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
DNO_0892 protein networkhttps://string-db.org/network/246195.DNO_0892Hypothetical protein; Identified by Glimmer2; putative.
DNO_0893 protein networkhttps://string-db.org/network/246195.DNO_0893Hypothetical protein; Identified by Glimmer2; putative.
pilV protein networkhttps://string-db.org/network/246195.DNO_0894Conserved hypothetical protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02523; match to protein family HMM TIGR02532.
pilC protein networkhttps://string-db.org/network/246195.DNO_0895Type IV fimbrial tip adhesin.
DNO_0896 protein networkhttps://string-db.org/network/246195.DNO_0896Hypothetical protein; Identified by Glimmer2; putative.
lipB protein networkhttps://string-db.org/network/246195.DNO_0897Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
DNO_0898 protein networkhttps://string-db.org/network/246195.DNO_0898Conserved hypothetical protein; Identified by match to protein family HMM PF04359; Belongs to the UPF0250 family.
DNO_0899 protein networkhttps://string-db.org/network/246195.DNO_0899D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family.
DNO_0900 protein networkhttps://string-db.org/network/246195.DNO_0900Two-component sensor kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
DNO_0901 protein networkhttps://string-db.org/network/246195.DNO_0901Two-component copper resistance response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
degQ protein networkhttps://string-db.org/network/246195.DNO_0902Serine protease; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM PF03510; match to protein family HMM TIGR02037; Belongs to the [...]
DNO_0903 protein networkhttps://string-db.org/network/246195.DNO_0903Two component phosphate response regulator PhoB; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
orn protein networkhttps://string-db.org/network/246195.DNO_0904Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.
DNO_0905 protein networkhttps://string-db.org/network/246195.DNO_09054'-phosphopantetheinyl transferase superfamily domain protein; Identified by match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
dnaQ protein networkhttps://string-db.org/network/246195.DNO_0906DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing func [...]
DNO_0907 protein networkhttps://string-db.org/network/246195.DNO_0907Phosphoglucomutase/phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF0 [...]
deoA protein networkhttps://string-db.org/network/246195.DNO_0908Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon a [...]
deoC protein networkhttps://string-db.org/network/246195.DNO_0909Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
nrdD protein networkhttps://string-db.org/network/246195.DNO_0910Ribonucleoside reductase family protein, class III; Identified by match to protein family HMM TIGR02827.
nrdG protein networkhttps://string-db.org/network/246195.DNO_0911Anaerobic ribonucleoside-triphosphate reductase activating protein; Identified by match to protein family HMM TIGR02826.
hslR protein networkhttps://string-db.org/network/246195.DNO_0912Ribosome-associated heat shock protein; Identified by match to protein family HMM PF01479; Belongs to the HSP15 family.
DNO_0913 protein networkhttps://string-db.org/network/246195.DNO_0913Septum formation topological specificity factor MinE superfamily protein; Identified by match to protein family HMM PF03776.
minD protein networkhttps://string-db.org/network/246195.DNO_0914Septum site-determining protein MinD; Identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968.
minC protein networkhttps://string-db.org/network/246195.DNO_0915Septum formation inhibitor MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that hav [...]
DNO_0916 protein networkhttps://string-db.org/network/246195.DNO_0916Peptidylprolyl cis-trans isomerase.
xth-2 protein networkhttps://string-db.org/network/246195.DNO_0917Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
purH protein networkhttps://string-db.org/network/246195.DNO_0918Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM T [...]
pyrE protein networkhttps://string-db.org/network/246195.DNO_0919Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
ostA protein networkhttps://string-db.org/network/246195.DNO_0920Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
DNO_0921 protein networkhttps://string-db.org/network/246195.DNO_0921PpiC-type peptidylprolyl cis-trans isomerase; Identified by match to protein family HMM PF00639; match to protein family HMM PF09312.
ksgA protein networkhttps://string-db.org/network/246195.DNO_0922rRNA adenine dimethylase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critic [...]
DNO_0923 protein networkhttps://string-db.org/network/246195.DNO_0923Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106.
dsbG protein networkhttps://string-db.org/network/246195.DNO_0924Protein disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs t [...]
DNO_0925 protein networkhttps://string-db.org/network/246195.DNO_0925Phosphoesterase domain protein; Identified by match to protein family HMM PF00149.
DNO_0926 protein networkhttps://string-db.org/network/246195.DNO_0926Identified by match to protein family HMM PF01817.
DNO_0927 protein networkhttps://string-db.org/network/246195.DNO_0927Hypothetical protein; Identified by Glimmer2; putative.
DNO_0928 protein networkhttps://string-db.org/network/246195.DNO_0928Conserved hypothetical protein; Identified by match to protein family HMM PF04228.
pdxK protein networkhttps://string-db.org/network/246195.DNO_0929Pyridoxal kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00687; Belongs to the pyridoxine kinase family.
DNO_0930 protein networkhttps://string-db.org/network/246195.DNO_0930Hypothetical protein; Identified by Glimmer2; putative.
dcuC protein networkhttps://string-db.org/network/246195.DNO_0931C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808.
thiM protein networkhttps://string-db.org/network/246195.DNO_0932Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
rimI protein networkhttps://string-db.org/network/246195.DNO_0933Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
metG protein networkhttps://string-db.org/network/246195.DNO_0934Methionyl-trna synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
rlmH protein networkhttps://string-db.org/network/246195.DNO_0935Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
DNO_0936 protein networkhttps://string-db.org/network/246195.DNO_0936Transporter associated domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471.
DNO_0937 protein networkhttps://string-db.org/network/246195.DNO_0937Conserved hypothetical protein; Identified by match to protein family HMM PF03734.
lysS protein networkhttps://string-db.org/network/246195.DNO_0938lysyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthe [...]
prfB protein networkhttps://string-db.org/network/246195.DNO_0939Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
purD protein networkhttps://string-db.org/network/246195.DNO_0940Phosphoribosylglycinamide synthetase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR [...]
galE protein networkhttps://string-db.org/network/246195.DNO_0941UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to [...]
DNO_0942 protein networkhttps://string-db.org/network/246195.DNO_0942Conserved hypothetical protein; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.
DNO_0944 protein networkhttps://string-db.org/network/246195.DNO_0944Hypothetical protein; Identified by Glimmer2; putative.
DNO_0945 protein networkhttps://string-db.org/network/246195.DNO_0945Polyprenyl synthase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
trmE protein networkhttps://string-db.org/network/246195.DNO_0948tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
yidC protein networkhttps://string-db.org/network/246195.DNO_0949Preprotein translocase subunit YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane [...]
DNO_0950 protein networkhttps://string-db.org/network/246195.DNO_0950Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
rnpA protein networkhttps://string-db.org/network/246195.DNO_0951Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
rpmH protein networkhttps://string-db.org/network/246195.DNO_095250S ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.
recR protein networkhttps://string-db.org/network/246195.DNO_0953Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
DNO_0954 protein networkhttps://string-db.org/network/246195.DNO_0954Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
dnaX protein networkhttps://string-db.org/network/246195.DNO_0955DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' [...]
DNO_0956 protein networkhttps://string-db.org/network/246195.DNO_0956Hypothetical protein; Identified by Glimmer2; putative.
DNO_0957 protein networkhttps://string-db.org/network/246195.DNO_0957ADP-ribose pyrophosphatase; Identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052.
DNO_0958 protein networkhttps://string-db.org/network/246195.DNO_0958Lipoprotein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
surE protein networkhttps://string-db.org/network/246195.DNO_0959Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
DNO_0960 protein networkhttps://string-db.org/network/246195.DNO_0960Hypothetical protein; Identified by Glimmer2; putative.
rlpA protein networkhttps://string-db.org/network/246195.DNO_0961Rare lipoprotein A domain protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
DNO_0962 protein networkhttps://string-db.org/network/246195.DNO_0962Membrane-bound lytic murein transglycosylase; Identified by match to protein family HMM TIGR02282.
rodA protein networkhttps://string-db.org/network/246195.DNO_0963Rod shape determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
DNO_0964 protein networkhttps://string-db.org/network/246195.DNO_0964Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
DNO_0965 protein networkhttps://string-db.org/network/246195.DNO_0965Hypothetical membrane protein.
mreC protein networkhttps://string-db.org/network/246195.DNO_0966Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
mreB protein networkhttps://string-db.org/network/246195.DNO_0967Rod shape-determining protein MreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.
gatC protein networkhttps://string-db.org/network/246195.DNO_0968glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
gatA protein networkhttps://string-db.org/network/246195.DNO_0969glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl- [...]
DNO_0970 protein networkhttps://string-db.org/network/246195.DNO_0970ABC transporter family ATP-binding protein; Identified by match to protein family HMM PF00005.
metK protein networkhttps://string-db.org/network/246195.DNO_0971S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...]
DNO_0972 protein networkhttps://string-db.org/network/246195.DNO_0972NUDIX hydrolase domain protein; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
secA protein networkhttps://string-db.org/network/246195.DNO_0973Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
DNO_0974 protein networkhttps://string-db.org/network/246195.DNO_0974Hypothetical protein; Identified by Glimmer2; putative.
lpxC protein networkhttps://string-db.org/network/246195.DNO_0975UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A bi [...]
ftsZ protein networkhttps://string-db.org/network/246195.DNO_0976Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
ftsA protein networkhttps://string-db.org/network/246195.DNO_0977Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
DNO_0978 protein networkhttps://string-db.org/network/246195.DNO_0978Cell division protein FtsQ; Essential cell division protein.
ddl protein networkhttps://string-db.org/network/246195.DNO_0979D-alanine-D-alanine ligase; Cell wall formation.
murC protein networkhttps://string-db.org/network/246195.DNO_0980UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murG protein networkhttps://string-db.org/network/246195.DNO_0981N-acetylglucosaminyltransferase, MurG; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecapren [...]
ftsW protein networkhttps://string-db.org/network/246195.DNO_0982Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.
murD protein networkhttps://string-db.org/network/246195.DNO_0983UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF f [...]
mraY protein networkhttps://string-db.org/network/246195.DNO_0984phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murF protein networkhttps://string-db.org/network/246195.DNO_0985UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
murE protein networkhttps://string-db.org/network/246195.DNO_0986UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelat e ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMA [...]
ftsI protein networkhttps://string-db.org/network/246195.DNO_0987Cell division protein FtsI; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
DNO_0988 protein networkhttps://string-db.org/network/246195.DNO_0988Hypothetical protein; Identified by Glimmer2; putative.
mraW protein networkhttps://string-db.org/network/246195.DNO_0989S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
rnfH protein networkhttps://string-db.org/network/246195.DNO_0990Conserved hypothetical protein; Identified by match to protein family HMM PF03658; Belongs to the UPF0125 (RnfH) family.
DNO_0991 protein networkhttps://string-db.org/network/246195.DNO_0991Identified by match to protein family HMM PF03364.
smpB protein networkhttps://string-db.org/network/246195.DNO_0992SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
DNO_0993 protein networkhttps://string-db.org/network/246195.DNO_0993Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753.
DNO_0994 protein networkhttps://string-db.org/network/246195.DNO_0994Bacterial extracellular solute-binding fmaily protein; Identified by match to protein family HMM PF00497.
DNO_0996 protein networkhttps://string-db.org/network/246195.DNO_0996Hypothetical protein; Identified by Glimmer2; putative.
DNO_0997 protein networkhttps://string-db.org/network/246195.DNO_0997Lipoprotein, putative.
DNO_0998 protein networkhttps://string-db.org/network/246195.DNO_0998Lipid A biosynthesis lauroyl acyltransferase; Identified by match to protein family HMM PF03279.
DNO_0999 protein networkhttps://string-db.org/network/246195.DNO_0999Peptidase SspA family; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706.
maf-2 protein networkhttps://string-db.org/network/246195.DNO_1000Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nuc [...]
rluC protein networkhttps://string-db.org/network/246195.DNO_1001Ribosomal large subunit pseudouridine synthase, RluC; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
DNO_1002 protein networkhttps://string-db.org/network/246195.DNO_1002long-chain-fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501.
DNO_1003 protein networkhttps://string-db.org/network/246195.DNO_1003Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate [...]
DNO_1004 protein networkhttps://string-db.org/network/246195.DNO_1004Conserved hypothetical protein; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.
coaD protein networkhttps://string-db.org/network/246195.DNO_1005Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
DNO_1006 protein networkhttps://string-db.org/network/246195.DNO_1006Hypothetical lipoprotein.
rpsP protein networkhttps://string-db.org/network/246195.DNO_100730S ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.
rimM protein networkhttps://string-db.org/network/246195.DNO_100816S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
trmD protein networkhttps://string-db.org/network/246195.DNO_1009tRNA (guanine-N1-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rplS protein networkhttps://string-db.org/network/246195.DNO_101050S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
cysQ protein networkhttps://string-db.org/network/246195.DNO_10113'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'- phosphatase; Identified by match to protein family HMM PF00459.
DNO_1012 protein networkhttps://string-db.org/network/246195.DNO_1012Hypothetical protein; Identified by Glimmer2; putative.
DNO_1013 protein networkhttps://string-db.org/network/246195.DNO_1013Ubiquinone biosynthesis hydroxylase; Identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988.
DNO_1014 protein networkhttps://string-db.org/network/246195.DNO_1014Hypothetical protein; Identified by Glimmer2; putative.
DNO_1015 protein networkhttps://string-db.org/network/246195.DNO_1015Conserved hypothetical protein; Identified by match to protein family HMM PF00702.
DNO_1017 protein networkhttps://string-db.org/network/246195.DNO_1017ATP-dependent RNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family.
recG protein networkhttps://string-db.org/network/246195.DNO_1018ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
DNO_1019 protein networkhttps://string-db.org/network/246195.DNO_1019Endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.
spoT protein networkhttps://string-db.org/network/246195.DNO_1020Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cel [...]
rpoZ protein networkhttps://string-db.org/network/246195.DNO_1021DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and al [...]
DNO_1022 protein networkhttps://string-db.org/network/246195.DNO_1022Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family.
pdxH protein networkhttps://string-db.org/network/246195.DNO_1023Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
hemL protein networkhttps://string-db.org/network/246195.DNO_1024Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00713.
rpsT protein networkhttps://string-db.org/network/246195.DNO_102530S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
frdA protein networkhttps://string-db.org/network/246195.DNO_1026Fumarate reductase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM [...]
frdB protein networkhttps://string-db.org/network/246195.DNO_1027Fumarate reductase, iron-sulfur protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384.
frdC protein networkhttps://string-db.org/network/246195.DNO_1028Fumarate reductase, subunit C.
DNO_1029 protein networkhttps://string-db.org/network/246195.DNO_1029Fumarate reductase, subunit D.
DNO_1030 protein networkhttps://string-db.org/network/246195.DNO_1030Conserved hypothetical protein.
DNO_1031 protein networkhttps://string-db.org/network/246195.DNO_1031Heptosyl transferase I; Identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193.
cobB protein networkhttps://string-db.org/network/246195.DNO_1032NAD-dependent deacetylase, Sir2 family; Identified by match to protein family HMM PF02146; Belongs to the sirtuin family. Class III subfamily.
DNO_1034 protein networkhttps://string-db.org/network/246195.DNO_1034Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
tkt protein networkhttps://string-db.org/network/246195.DNO_1035Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; Belongs to the t [...]
pgk protein networkhttps://string-db.org/network/246195.DNO_1036Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
DNO_1037 protein networkhttps://string-db.org/network/246195.DNO_1037Hypothetical membrane protein.
toxA2 protein networkhttps://string-db.org/network/246195.DNO_1039Plasmid maintenance system killer family protein ToxA2; Identified by match to protein family HMM PF05015.
vapA3 protein networkhttps://string-db.org/network/246195.DNO_1040Virulence-associated protein VapA3; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.
vapB2 protein networkhttps://string-db.org/network/246195.DNO_1041Virulence-associated protein VapB2; Identified by match to protein family HMM PF04014.
vapC2 protein networkhttps://string-db.org/network/246195.DNO_1042Virulence-associated protein VapC2; Identified by match to protein family HMM PF01850.
vapE3 protein networkhttps://string-db.org/network/246195.DNO_1043Virulence-associated protein VapE3; Identified by match to protein family HMM PF05272.
vapG3 protein networkhttps://string-db.org/network/246195.DNO_1044Virulence-associated protein VapG3.
intA2 protein networkhttps://string-db.org/network/246195.DNO_1045Integrase A2; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
pnp protein networkhttps://string-db.org/network/246195.DNO_1047Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rpsO protein networkhttps://string-db.org/network/246195.DNO_104830S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging seve [...]
azu protein networkhttps://string-db.org/network/246195.DNO_1049Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
DNO_1050 protein networkhttps://string-db.org/network/246195.DNO_1050Hypothetical protein; Identified by Glimmer2; putative.
argS protein networkhttps://string-db.org/network/246195.DNO_1051arginyl-tRNA synthetase; Identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456.
dusA protein networkhttps://string-db.org/network/246195.DNO_1052tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines [...]
asd protein networkhttps://string-db.org/network/246195.DNO_1053Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01745; Belongs to the aspartate-semia [...]
DNO_1054 protein networkhttps://string-db.org/network/246195.DNO_1054Helicase family protein.
pheS protein networkhttps://string-db.org/network/246195.DNO_1055phenylalanyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II [...]
pheT protein networkhttps://string-db.org/network/246195.DNO_1056phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HM [...]
ihfA protein networkhttps://string-db.org/network/246195.DNO_1057Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tr [...]
DNO_1058 protein networkhttps://string-db.org/network/246195.DNO_1058Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
DNO_1059 protein networkhttps://string-db.org/network/246195.DNO_1059Hydrolase, HAD-superfamily; Identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
cca protein networkhttps://string-db.org/network/246195.DNO_1060tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order [...]
DNO_1061 protein networkhttps://string-db.org/network/246195.DNO_1061Conserved hypothetical protein; Identified by match to protein family HMM PF00583.
nadK protein networkhttps://string-db.org/network/246195.DNO_1062ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl [...]
recN protein networkhttps://string-db.org/network/246195.DNO_1063DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
DNO_1064 protein networkhttps://string-db.org/network/246195.DNO_1064SmpA/OmlA family lipoprotein.
serS protein networkhttps://string-db.org/network/246195.DNO_1065seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
phoU protein networkhttps://string-db.org/network/246195.DNO_1066Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.
DNO_1067 protein networkhttps://string-db.org/network/246195.DNO_1067Conserved hypothetical protein; Identified by match to protein family HMM PF00877.
DNO_1068 protein networkhttps://string-db.org/network/246195.DNO_1068Hypothetical protein; Identified by Glimmer2; putative.
gcvP protein networkhttps://string-db.org/network/246195.DNO_1069Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...]
gcvH protein networkhttps://string-db.org/network/246195.DNO_1070Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
adk protein networkhttps://string-db.org/network/246195.DNO_1071Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
aroC protein networkhttps://string-db.org/network/246195.DNO_1072Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
arcC protein networkhttps://string-db.org/network/246195.DNO_1073Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family.
argF-1 protein networkhttps://string-db.org/network/246195.DNO_1074Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...]
arcA protein networkhttps://string-db.org/network/246195.DNO_1075Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078.
folB protein networkhttps://string-db.org/network/246195.DNO_1076Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
plsY protein networkhttps://string-db.org/network/246195.DNO_1077Conserved hypothetical membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme ut [...]
rpoD protein networkhttps://string-db.org/network/246195.DNO_1078RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the pri [...]
dnaG protein networkhttps://string-db.org/network/246195.DNO_1079DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
DNO_1080 protein networkhttps://string-db.org/network/246195.DNO_1080GatB-Yqey domain protein; Identified by match to protein family HMM PF02637.
rpsU protein networkhttps://string-db.org/network/246195.DNO_108130S ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
DNO_1082 protein networkhttps://string-db.org/network/246195.DNO_1082Conserved hypothetical protein; Identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; Belongs to the LOG family.
rlmD protein networkhttps://string-db.org/network/246195.DNO_108323S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U meth [...]
aroB protein networkhttps://string-db.org/network/246195.DNO_10843-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquin [...]
DNO_1085 protein networkhttps://string-db.org/network/246195.DNO_1085Carbonic anhydrase; Identified by match to protein family HMM PF00484.
DNO_1086 protein networkhttps://string-db.org/network/246195.DNO_1086Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.
ttcA protein networkhttps://string-db.org/network/246195.DNO_1088Adenine nucleotide alpha hydrolase ATP-binding family protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are [...]
accA protein networkhttps://string-db.org/network/246195.DNO_1091acetyl-CoA carboxylase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) [...]
DNO_1092 protein networkhttps://string-db.org/network/246195.DNO_1092Hypothetical protein; Identified by Glimmer2; putative.
chpA protein networkhttps://string-db.org/network/246195.DNO_1093Chemotaxis protein ChpA; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.
pilJ protein networkhttps://string-db.org/network/246195.DNO_1094Twitching motility protein PilJ; Identified by match to protein family HMM PF00015.
DNO_1095 protein networkhttps://string-db.org/network/246195.DNO_1095Hypothetical protein; Identified by Glimmer2; putative.
pilH protein networkhttps://string-db.org/network/246195.DNO_1096Twitching motility regulator PilH; Identified by match to protein family HMM PF00072.
pilG protein networkhttps://string-db.org/network/246195.DNO_1097Twitching motility regulator PilG; Identified by match to protein family HMM PF00072.
DNO_1098 protein networkhttps://string-db.org/network/246195.DNO_1098Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
trxB protein networkhttps://string-db.org/network/246195.DNO_1099Thioredoxin reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
lpdA protein networkhttps://string-db.org/network/246195.DNO_1100Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; m [...]
psd protein networkhttps://string-db.org/network/246195.DNO_1101Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
rnhA protein networkhttps://string-db.org/network/246195.DNO_1102RNase H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
brnQ protein networkhttps://string-db.org/network/246195.DNO_1103Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
DNO_1104 protein networkhttps://string-db.org/network/246195.DNO_1104Hypothetical membrane protein.
DNO_1105 protein networkhttps://string-db.org/network/246195.DNO_1105Conserved hypothetical protein; Identified by match to protein family HMM PF04325.
ppk protein networkhttps://string-db.org/network/246195.DNO_1106Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
DNO_1107 protein networkhttps://string-db.org/network/246195.DNO_1107SPFH domain - Band 7 family protein; Identified by match to protein family HMM PF01145.
glnS protein networkhttps://string-db.org/network/246195.DNO_1108glutaminyl-tRNA synthetase; Identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440.
DNO_1109 protein networkhttps://string-db.org/network/246195.DNO_1109Identified by match to protein family HMM PF02566.
DNO_1110 protein networkhttps://string-db.org/network/246195.DNO_1110Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.
DNO_1111 protein networkhttps://string-db.org/network/246195.DNO_1111K+-dependent Na+-Ca+ exchanger related family protein; Identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367.
purC protein networkhttps://string-db.org/network/246195.DNO_1112Phosphoribosylaminoimidazole- succinocarboxamidesynthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.
purM protein networkhttps://string-db.org/network/246195.DNO_1113Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.
dapA protein networkhttps://string-db.org/network/246195.DNO_1114Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
DNO_1115 protein networkhttps://string-db.org/network/246195.DNO_1115Conserved hypothetical lipoprotein.
mutL protein networkhttps://string-db.org/network/246195.DNO_1116DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
miaA protein networkhttps://string-db.org/network/246195.DNO_1117tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
aspS protein networkhttps://string-db.org/network/246195.DNO_1118aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
rplI protein networkhttps://string-db.org/network/246195.DNO_111950S ribosomal protein L9; Binds to the 23S rRNA.
rpsR protein networkhttps://string-db.org/network/246195.DNO_112030S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...]
rpsF protein networkhttps://string-db.org/network/246195.DNO_1121Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
coaE protein networkhttps://string-db.org/network/246195.DNO_1122dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
rnd protein networkhttps://string-db.org/network/246195.DNO_1123Identified by match to protein family HMM PF01612.
fimP protein networkhttps://string-db.org/network/246195.DNO_1124Type IV prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
fimO protein networkhttps://string-db.org/network/246195.DNO_1125Type IV fimbrial biogenesis protein FimO; Identified by match to protein family HMM PF00482.
fimN protein networkhttps://string-db.org/network/246195.DNO_1126Type IV fimbrial biogenesis nucleotide binding protein FimN; Identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538.
DNO_1127 protein networkhttps://string-db.org/network/246195.DNO_1127Para-aminobenzoate synthetase, component II; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566.
recO protein networkhttps://string-db.org/network/246195.DNO_1128Hypothetical protein; Identified by Glimmer2; putative.
rplM protein networkhttps://string-db.org/network/246195.DNO_112950S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...]
rpsI protein networkhttps://string-db.org/network/246195.DNO_113030S ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.
xerD protein networkhttps://string-db.org/network/246195.DNO_1131Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert [...]
DNO_1132 protein networkhttps://string-db.org/network/246195.DNO_1132Conserved hypothetical protein.
DNO_1133 protein networkhttps://string-db.org/network/246195.DNO_1133Hypothetical protein; Identified by Glimmer2; putative.
DNO_1134 protein networkhttps://string-db.org/network/246195.DNO_1134Pseudouridine synthase, TruD family; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
mutM protein networkhttps://string-db.org/network/246195.DNO_1135formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...]
DNO_1136 protein networkhttps://string-db.org/network/246195.DNO_11363-hydroxyacyl-CoA dehydrogenase, NAD binding domain family protein; Identified by match to protein family HMM PF02737.
proS protein networkhttps://string-db.org/network/246195.DNO_1137prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
DNO_1138 protein networkhttps://string-db.org/network/246195.DNO_1138Hypothetical protein; Identified by Glimmer2; putative.
DNO_1139 protein networkhttps://string-db.org/network/246195.DNO_1139Hypothetical protein; Identified by Glimmer2; putative.
glmU protein networkhttps://string-db.org/network/246195.DNO_1140UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyz [...]
atpC protein networkhttps://string-db.org/network/246195.DNO_1141ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
atpD protein networkhttps://string-db.org/network/246195.DNO_1142ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase [...]
atpG protein networkhttps://string-db.org/network/246195.DNO_1143ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...]
atpA protein networkhttps://string-db.org/network/246195.DNO_1144ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains fa [...]
atpH protein networkhttps://string-db.org/network/246195.DNO_1145ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...]
atpF protein networkhttps://string-db.org/network/246195.DNO_1146ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpE protein networkhttps://string-db.org/network/246195.DNO_1147ATP synthase F0, C subunit; Identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260.
atpB protein networkhttps://string-db.org/network/246195.DNO_1148ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
DNO_1149 protein networkhttps://string-db.org/network/246195.DNO_1149Partioning protein, ParB/SpoJ family; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
gidB protein networkhttps://string-db.org/network/246195.DNO_1150Glucose inhibited division protein GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
pepA protein networkhttps://string-db.org/network/246195.DNO_1151Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
DNO_1152 protein networkhttps://string-db.org/network/246195.DNO_1152Conserved hypothetical membrane protein; Identified by match to protein family HMM PF03739.
DNO_1153 protein networkhttps://string-db.org/network/246195.DNO_1153Conserved hypothetical membrane protein; Identified by match to protein family HMM PF03739.
DNO_1154 protein networkhttps://string-db.org/network/246195.DNO_1154Hypothetical protein; Identified by Glimmer2; putative.
DNO_1155 protein networkhttps://string-db.org/network/246195.DNO_1155Hypothetical lipoprotein.
DNO_1156 protein networkhttps://string-db.org/network/246195.DNO_1156Hypothetical protein; Identified by Glimmer2; putative.
DNO_1157 protein networkhttps://string-db.org/network/246195.DNO_1157Sodium/hydrogen exchanger; Identified by match to protein family HMM PF00999; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
DNO_1158 protein networkhttps://string-db.org/network/246195.DNO_1158Conserved hypothetical protein; Identified by match to protein family HMM PF04342.
DNO_1159 protein networkhttps://string-db.org/network/246195.DNO_1159Transcriptional accessory protein; Identified by match to protein family HMM PF00575.
DNO_1160 protein networkhttps://string-db.org/network/246195.DNO_1160Conserved hypothetical protein.
dam protein networkhttps://string-db.org/network/246195.DNO_1161DNA adenine methylase; Identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571.
DNO_1162 protein networkhttps://string-db.org/network/246195.DNO_1162Identified by match to protein family HMM PF02632.
trmA protein networkhttps://string-db.org/network/246195.DNO_1163tRNA (uracil-5)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmR [...]
DNO_1164 protein networkhttps://string-db.org/network/246195.DNO_1164Hypothetical protein; Identified by Glimmer2; putative.
recB protein networkhttps://string-db.org/network/246195.DNO_1165Exonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bid [...]
DNO_1166 protein networkhttps://string-db.org/network/246195.DNO_1166Conserved hypothetical protein.
aprV2 protein networkhttps://string-db.org/network/246195.DNO_1167Acidic extracellular subtilisin-like protease AprV2; Identified by match to protein family HMM PF00082; match to protein family HMM PF01483; Belongs to the peptidase S8 family.
DNO_1168 protein networkhttps://string-db.org/network/246195.DNO_1168Hypothetical protein; Identified by Glimmer2; putative.
DNO_1169 protein networkhttps://string-db.org/network/246195.DNO_1169Hypothetical protein; Identified by Glimmer2; putative.
DNO_1170 protein networkhttps://string-db.org/network/246195.DNO_1170Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF07719.
pal protein networkhttps://string-db.org/network/246195.DNO_1171OmpA domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
tolB protein networkhttps://string-db.org/network/246195.DNO_1172TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
tolA protein networkhttps://string-db.org/network/246195.DNO_1173TolA protein.
tolR protein networkhttps://string-db.org/network/246195.DNO_1174TolR protein; Identified by match to protein family HMM PF02472.
tolQ protein networkhttps://string-db.org/network/246195.DNO_1175TolQ protein; Identified by match to protein family HMM PF01618.
ruvB protein networkhttps://string-db.org/network/246195.DNO_1176Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvA protein networkhttps://string-db.org/network/246195.DNO_1177Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvC protein networkhttps://string-db.org/network/246195.DNO_1178Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
DNO_1179 protein networkhttps://string-db.org/network/246195.DNO_1179Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033.
pstS protein networkhttps://string-db.org/network/246195.DNO_1180Phosphate binding family protein.
DNO_1181 protein networkhttps://string-db.org/network/246195.DNO_1181ABC-type phosphate-dependent transport system family protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate acr [...]
DNO_1182 protein networkhttps://string-db.org/network/246195.DNO_1182ABC-type phosphate-dependent transport system family protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
pstB protein networkhttps://string-db.org/network/246195.DNO_1183ABC-type phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to t [...]
greA protein networkhttps://string-db.org/network/246195.DNO_1184Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
DNO_1185 protein networkhttps://string-db.org/network/246195.DNO_1185Hypothetical protein; Identified by Glimmer2; putative.
DNO_1186 protein networkhttps://string-db.org/network/246195.DNO_1186Identified by match to protein family HMM PF07690.
DNO_1187 protein networkhttps://string-db.org/network/246195.DNO_1187Conserved hypothetical membrane protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF03600.
DNO_1188 protein networkhttps://string-db.org/network/246195.DNO_1188Hypothetical protein; Identified by Glimmer2; putative.
DNO_1189 protein networkhttps://string-db.org/network/246195.DNO_1189TetR family transcriptional regulator; Identified by match to protein family HMM PF00440.
DNO_1190 protein networkhttps://string-db.org/network/246195.DNO_1190Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
acrF protein networkhttps://string-db.org/network/246195.DNO_1191Mutidrug efflux protein; Identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915.
DNO_1192 protein networkhttps://string-db.org/network/246195.DNO_1192Outer membrane multidrug efflux protein; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
DNO_1194 protein networkhttps://string-db.org/network/246195.DNO_1194Hypothetical protein; Identified by Glimmer2; putative.
DNO_1195 protein networkhttps://string-db.org/network/246195.DNO_1195Hypothetical protein; Identified by Glimmer2; putative.
iscS protein networkhttps://string-db.org/network/246195.DNO_1196Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
gcvT protein networkhttps://string-db.org/network/246195.DNO_1197Glycine cleavage system T protein; Identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528.
infA protein networkhttps://string-db.org/network/246195.DNO_1198Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
DNO_1199 protein networkhttps://string-db.org/network/246195.DNO_1199Hypothetical protein; Identified by Glimmer2; putative.
pyk protein networkhttps://string-db.org/network/246195.DNO_1200Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
DNO_1201 protein networkhttps://string-db.org/network/246195.DNO_1201Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
ampD protein networkhttps://string-db.org/network/246195.DNO_1202N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.
DNO_1203 protein networkhttps://string-db.org/network/246195.DNO_1203Hypothetical protein; Identified by Glimmer2; putative.
DNO_1204 protein networkhttps://string-db.org/network/246195.DNO_1204Conserved hypothetical protein; Identified by match to protein family HMM PF02620.
rpmF protein networkhttps://string-db.org/network/246195.DNO_120550S ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.
plsX protein networkhttps://string-db.org/network/246195.DNO_1206Fatty acid-phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...]
fabH protein networkhttps://string-db.org/network/246195.DNO_12073-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
fabD protein networkhttps://string-db.org/network/246195.DNO_1208Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.
fabG protein networkhttps://string-db.org/network/246195.DNO_12093-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
acpP protein networkhttps://string-db.org/network/246195.DNO_1210Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
fabF protein networkhttps://string-db.org/network/246195.DNO_12113-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
mltG protein networkhttps://string-db.org/network/246195.DNO_1212Aminodeoxychorismate lyase family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
tmk protein networkhttps://string-db.org/network/246195.DNO_1213Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
holB protein networkhttps://string-db.org/network/246195.DNO_1214DNA polymerase III, delta' subunit; Identified by match to protein family HMM PF00627.
pilZ protein networkhttps://string-db.org/network/246195.DNO_1215Type IV fimbrial biogenesis protein PilZ.
DNO_1216 protein networkhttps://string-db.org/network/246195.DNO_1216Identified by match to protein family HMM PF03741.
gshA protein networkhttps://string-db.org/network/246195.DNO_1217Glutamate--cysteine ligase; Identified by match to protein family HMM PF04262; match to protein family HMM TIGR01434; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
gshB protein networkhttps://string-db.org/network/246195.DNO_1218Glutathione synthetase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM PF08443; match to protein family HMM TIGR01380; Belongs [...]
DNO_1219 protein networkhttps://string-db.org/network/246195.DNO_1219Hypothetical protein; Identified by Glimmer2; putative.
pgl protein networkhttps://string-db.org/network/246195.DNO_12226-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
zwf protein networkhttps://string-db.org/network/246195.DNO_1223Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
DNO_1224 protein networkhttps://string-db.org/network/246195.DNO_1224Hypothetical protein; Identified by Glimmer2; putative.
DNO_1225 protein networkhttps://string-db.org/network/246195.DNO_1225Hypothetical membrane protein; Identified by match to protein family HMM PF04536.
DNO_1226 protein networkhttps://string-db.org/network/246195.DNO_1226Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF04011.
DNO_1227 protein networkhttps://string-db.org/network/246195.DNO_1227Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
DNO_1228 protein networkhttps://string-db.org/network/246195.DNO_1228ABC-type lipoprotein releasing system protein LolC; Identified by match to protein family HMM PF02687.
lolD protein networkhttps://string-db.org/network/246195.DNO_1229Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner memb [...]
gnd protein networkhttps://string-db.org/network/246195.DNO_12366-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
folP protein networkhttps://string-db.org/network/246195.DNO_1237Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
ftsH protein networkhttps://string-db.org/network/246195.DNO_1238ATP-dependent protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane protein [...]
rrmJ protein networkhttps://string-db.org/network/246195.DNO_123923S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
DNO_1240 protein networkhttps://string-db.org/network/246195.DNO_1240Identified by match to protein family HMM PF01985.
DNO_1241 protein networkhttps://string-db.org/network/246195.DNO_1241Hypothetical lipoprotein.
DNO_1242 protein networkhttps://string-db.org/network/246195.DNO_1242Hypothetical protein; Identified by Glimmer2; putative.
ybeY protein networkhttps://string-db.org/network/246195.DNO_1243Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
phoH protein networkhttps://string-db.org/network/246195.DNO_1244Phospahte starvation induced protein PhoH; Identified by match to protein family HMM PF02562.
miaB protein networkhttps://string-db.org/network/246195.DNO_1245tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...]
DNO_1246 protein networkhttps://string-db.org/network/246195.DNO_1246Conserved hypothetical protein; Identified by match to protein family HMM PF08238.
trmB protein networkhttps://string-db.org/network/246195.DNO_1247tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
folE2 protein networkhttps://string-db.org/network/246195.DNO_1248Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
hemH protein networkhttps://string-db.org/network/246195.DNO_1249Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
rplQ protein networkhttps://string-db.org/network/246195.DNO_125050S ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.
rpoA protein networkhttps://string-db.org/network/246195.DNO_1251DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsD protein networkhttps://string-db.org/network/246195.DNO_125230S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/246195.DNO_125330S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsM protein networkhttps://string-db.org/network/246195.DNO_125430S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
secY protein networkhttps://string-db.org/network/246195.DNO_1255Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...]
rplO protein networkhttps://string-db.org/network/246195.DNO_125650S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpmD protein networkhttps://string-db.org/network/246195.DNO_125750S ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.
rpsE protein networkhttps://string-db.org/network/246195.DNO_125830S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
rplR protein networkhttps://string-db.org/network/246195.DNO_125950S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
rplF protein networkhttps://string-db.org/network/246195.DNO_126050S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rpsH protein networkhttps://string-db.org/network/246195.DNO_126130S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rpsN protein networkhttps://string-db.org/network/246195.DNO_126230S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the un [...]
rplE protein networkhttps://string-db.org/network/246195.DNO_126350S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...]
rplX protein networkhttps://string-db.org/network/246195.DNO_126450S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplN protein networkhttps://string-db.org/network/246195.DNO_126550S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/246195.DNO_126630S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/246195.DNO_126750S ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/246195.DNO_126850S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/246195.DNO_126930S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/246195.DNO_127050S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50 [...]
rpsS protein networkhttps://string-db.org/network/246195.DNO_127130S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/246195.DNO_127250S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...]
rplW protein networkhttps://string-db.org/network/246195.DNO_127350S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplD protein networkhttps://string-db.org/network/246195.DNO_127450S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes [...]
rplC protein networkhttps://string-db.org/network/246195.DNO_127550S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rpsJ protein networkhttps://string-db.org/network/246195.DNO_127630S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
tufA protein networkhttps://string-db.org/network/246195.DNO_1277Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
fusA protein networkhttps://string-db.org/network/246195.DNO_1278Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/246195.DNO_127930S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...]
rpsL protein networkhttps://string-db.org/network/246195.DNO_128030S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
rpoC protein networkhttps://string-db.org/network/246195.DNO_1281DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/246195.DNO_1282DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplL protein networkhttps://string-db.org/network/246195.DNO_128350S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the ba [...]
rplJ protein networkhttps://string-db.org/network/246195.DNO_128450S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...]
rplA protein networkhttps://string-db.org/network/246195.DNO_128550S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplK protein networkhttps://string-db.org/network/246195.DNO_128650S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/246195.DNO_1287Transcription termination-antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
secE protein networkhttps://string-db.org/network/246195.DNO_1288Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; B [...]
apaH protein networkhttps://string-db.org/network/246195.DNO_1294Diadenosine tetraphosphatase; Identified by match to protein family HMM PF00149.
DNO_1295 protein networkhttps://string-db.org/network/246195.DNO_1295Identified by match to protein family HMM PF00248.
kdtA protein networkhttps://string-db.org/network/246195.DNO_12963-Deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV( [...]
fld protein networkhttps://string-db.org/network/246195.DNO_1297Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
folD protein networkhttps://string-db.org/network/246195.DNO_1298Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10 [...]
DNO_1299 protein networkhttps://string-db.org/network/246195.DNO_1299Histidine triad (HIT) domain protein; Identified by match to protein family HMM PF01230.
DNO_1300 protein networkhttps://string-db.org/network/246195.DNO_1300Conserved hypothetical protein.
DNO_1301 protein networkhttps://string-db.org/network/246195.DNO_1301Identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
DNO_1302 protein networkhttps://string-db.org/network/246195.DNO_1302Conserved hypothetical lipoprotein; Identified by match to protein family HMM PF04575.
mutS protein networkhttps://string-db.org/network/246195.DNO_1303DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
DNO_1304 protein networkhttps://string-db.org/network/246195.DNO_1304Identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426.
comL protein networkhttps://string-db.org/network/246195.DNO_1310Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
rluD protein networkhttps://string-db.org/network/246195.DNO_1311Ribosomal large subunit pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
suC protein networkhttps://string-db.org/network/246195.DNO_1312succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus rep [...]
sucD protein networkhttps://string-db.org/network/246195.DNO_1313succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus re [...]
DNO_1314 protein networkhttps://string-db.org/network/246195.DNO_1314AmpG family permaese; Identified by match to protein family HMM PF07690.
DNO_1315 protein networkhttps://string-db.org/network/246195.DNO_1315Hypothetical protein; Identified by Glimmer2; putative.
rlmL protein networkhttps://string-db.org/network/246195.DNO_1316RNA methylase family protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. [...]
dsbC protein networkhttps://string-db.org/network/246195.DNO_1317Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the proce [...]
DNO_1318 protein networkhttps://string-db.org/network/246195.DNO_1318Dps family protein; Identified by match to protein family HMM PF00210; Belongs to the Dps family.
DNO_1319 protein networkhttps://string-db.org/network/246195.DNO_1319Hypothetical membrane protein; Identified by match to protein family HMM PF00498.
DNO_1320 protein networkhttps://string-db.org/network/246195.DNO_1320Trypsin-like serine and cysteine protease family protein; Identified by match to protein family HMM PF00089.
tyrS protein networkhttps://string-db.org/network/246195.DNO_1321tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
DNO_1322 protein networkhttps://string-db.org/network/246195.DNO_1322M23peptidase domain protein; Identified by match to protein family HMM PF01551.
anmK protein networkhttps://string-db.org/network/246195.DNO_1323Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6 [...]
crcB protein networkhttps://string-db.org/network/246195.DNO_1324Camphor resistance (CrcB) family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
ychF protein networkhttps://string-db.org/network/246195.DNO_1325GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
efp protein networkhttps://string-db.org/network/246195.DNO_1326Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, [...]
DNO_1327 protein networkhttps://string-db.org/network/246195.DNO_1327Conserved hypothetical lipoprotein.
DNO_1328 protein networkhttps://string-db.org/network/246195.DNO_1328Conserved hypothetical protein.
DNO_1329 protein networkhttps://string-db.org/network/246195.DNO_1329Hypothetical lipoprotein.
DNO_1330 protein networkhttps://string-db.org/network/246195.DNO_1330GlpG-like proten; Identified by match to protein family HMM PF01694.
DNO_1331 protein networkhttps://string-db.org/network/246195.DNO_1331Identified by match to protein family HMM PF01042.
hemE protein networkhttps://string-db.org/network/246195.DNO_1332Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
pflA protein networkhttps://string-db.org/network/246195.DNO_1333Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodo [...]
pflB protein networkhttps://string-db.org/network/246195.DNO_1334Pyruvate-formate lyase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255.
argF-2 protein networkhttps://string-db.org/network/246195.DNO_1335Ornithine carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658.
DNO_1336 protein networkhttps://string-db.org/network/246195.DNO_1336Conserved hypothetical protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM TIGR00275.
DNO_1337 protein networkhttps://string-db.org/network/246195.DNO_1337HAD-superfamily hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460.
ptrB protein networkhttps://string-db.org/network/246195.DNO_1338Prolyl oligopeptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897.
groEL protein networkhttps://string-db.org/network/246195.DNO_1339Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
groES protein networkhttps://string-db.org/network/246195.DNO_1340Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
DNO_1341 protein networkhttps://string-db.org/network/246195.DNO_1341Transposase, IS605 family; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766.
DNO_1342 protein networkhttps://string-db.org/network/246195.DNO_1342Transposase, IS200 family; Identified by match to protein family HMM PF01797.
DNO_1343 protein networkhttps://string-db.org/network/246195.DNO_1343Bacterial extracellular solute-binding protein.
DNO_1344 protein networkhttps://string-db.org/network/246195.DNO_1344Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
DNO_1345 protein networkhttps://string-db.org/network/246195.DNO_1345Bacterial extracellular solute-binding family protein.
hslV protein networkhttps://string-db.org/network/246195.DNO_1346Heat shock protein HslVU, protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
hslU protein networkhttps://string-db.org/network/246195.DNO_1347Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by Hs [...]
DNO_1348 protein networkhttps://string-db.org/network/246195.DNO_1348Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family [...]
sdaC protein networkhttps://string-db.org/network/246195.DNO_1349Serine transporter SdaC; Identified by match to protein family HMM PF01490.
pepT-2 protein networkhttps://string-db.org/network/246195.DNO_1350Aminotripeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
dcpA protein networkhttps://string-db.org/network/246195.DNO_1351Identified by match to protein family HMM PF01432.
dcpB protein networkhttps://string-db.org/network/246195.DNO_1352Peptidyl-dipeptidase II; Identified by match to protein family HMM PF01432.
dcuCA protein networkhttps://string-db.org/network/246195.DNO_1353C4-dicarboxylate anaerobic carrier, DcuC family protein; Identified by match to protein family HMM PF03606; match to protein family HMM PF06808; match to protein family HMM TIGR00771.
dcuCB protein networkhttps://string-db.org/network/246195.DNO_1354C4-dicarboxylate anaerobic carrier, DcuC family protein; Identified by match to protein family HMM PF03606; match to protein family HMM PF06808; match to protein family HMM TIGR00771.