| gidA protein network | https://string-db.org/network/257313.BP0001 | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...] |
| gidB protein network | https://string-db.org/network/257313.BP0002 | Glucose inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. |
| parA protein network | https://string-db.org/network/257313.BP0003 | ParA family protein; Similar to Caulobacter crescentus chromosome partitioning protein ParA or Cc3753 SW:PARA_CAUCR (O05189) (267 aa) fasta scores: E(): 1.9e-46, 49.412% id in 255 aa, and to Baci [...] |
| BP0004 protein network | https://string-db.org/network/257313.BP0004 | Similar to Caulobacter crescentus acetyltransferase, GnaT family Cc2209 TR:Q9A685 (EMBL:AE005892) (207 aa) fasta scores: E(): 1.8e-07, 34.653% id in 202 aa, and to Rhizobium meliloti putative ace [...] |
| parB protein network | https://string-db.org/network/257313.BP0005 | Similar to Pseudomonas putida probable chromosome partitioning protein ParB SW:PARB_PSEPU (P31857) (290 aa) fasta scores: E(): 3.9e-40, 48.136% id in 295 aa; Belongs to the ParB family. |
| tufA protein network | https://string-db.org/network/257313.BP0007 | tRNA-Thr; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| secE protein network | https://string-db.org/network/257313.BP0008 | Preprotein translocase SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Be [...] |
| nusG protein network | https://string-db.org/network/257313.BP0009 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. |
| rplK protein network | https://string-db.org/network/257313.BP0010 | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
| rplA protein network | https://string-db.org/network/257313.BP0011 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. |
| rplJ protein network | https://string-db.org/network/257313.BP0013 | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...] |
| rplL protein network | https://string-db.org/network/257313.BP0014 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the ba [...] |
| rpoB protein network | https://string-db.org/network/257313.BP0015 | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpoC protein network | https://string-db.org/network/257313.BP0016 | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| BP0017 protein network | https://string-db.org/network/257313.BP0017 | Putative lipoprotein; No significant database matches. |
| BP0018 protein network | https://string-db.org/network/257313.BP0018 | Putative membrane protein; No significant database matches. |
| BP0020 protein network | https://string-db.org/network/257313.BP0020 | Probable two-component sensor protein (Pseudogene); HMMPfam hit to PF00512, His Kinase A (phosphoacceptor) domain. |
| BP0022 protein network | https://string-db.org/network/257313.BP0022 | Probable two-component response regulator (Pseudogene); HMMPfam hit to PF00072, Response regulator receiver domain. |
| BP0025 protein network | https://string-db.org/network/257313.BP0025 | Putative racemase (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to Rhodococcus spAD45 putative racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta [...] |
| BP0026 protein network | https://string-db.org/network/257313.BP0026 | Putative thiolase; Similar to Mycobacterium tuberculosis CDC1551 nonspecific lipid-transfer protein mt1663 TR:AAK45933 (EMBL:AE007030) (402 aa) fasta scores: E(): 5.1e-14, 27.229% id in 415 aa, a [...] |
| BP0027 protein network | https://string-db.org/network/257313.BP0027 | MaoC family protein; Similar to Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 3.3e-19, 46.154% id in 143 aa, and to Rhodococcus spNCIMB 9784. fa [...] |
| BP0028 protein network | https://string-db.org/network/257313.BP0028 | Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 TR:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 1e-17, 27.985% id in 268 aa, and to Rhizobium loti probable trans [...] |
| BP0029 protein network | https://string-db.org/network/257313.BP0029 | Similar to Deinococcus radiodurans enoyl-CoA hydratase, putative DR0184 TR:Q9RXX1 (EMBL:AE001881) (273 aa) fasta scores: E(): 8e-50, 52.209% id in 249 aa, and to Mycobacterium tuberculosis enoyl- [...] |
| BP0030 protein network | https://string-db.org/network/257313.BP0030 | Conserved hypothetical protein; Similar to Methanothermobacter thermautotrophicus conserved protein mth965 TR:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 1.2e-26, 31.308% id in 428 aa, and [...] |
| BP0031 protein network | https://string-db.org/network/257313.BP0031 | Transposase for IS481 element. |
| BP0032 protein network | https://string-db.org/network/257313.BP0032 | Probable transporter; Similar to Rhodococcus fascians chloramphenicol resistance protein TR:Q52751 (EMBL:Z12001) (391 aa) fasta scores: E(): 1.6e-10, 25.193% id in 389 aa, and to Rhodococcus rhod [...] |
| glyQ protein network | https://string-db.org/network/257313.BP0033 | Similar to Escherichia coli glycyl-tRNA synthetase alpha chain GlyQ or GlyS(a) or B3560 SW:SYGA_ECOLI (P00960) (303 aa) fasta scores: E(): 1.9e-90, 74.658% id in 292 aa, and to Neisseria meningit [...] |
| glyS protein network | https://string-db.org/network/257313.BP0034 | Similar to Escherichia coli glycyl-tRNA synthetase beta chain GlyS or GlyS(b) or B3559 SW:SYGB_ECOLI (P00961) (688 aa) fasta scores: E(): 3e-69, 40.056% id in 709 aa, and to Pseudomonas aeruginos [...] |
| BP0035 protein network | https://string-db.org/network/257313.BP0035 | Putative haloacid dehalogenase-like hydrolase; Similar to Pseudomonas fluorescens hisb-like protein TR:Q9F729 (EMBL:AF286536) (213 aa) fasta scores: E(): 3.1e-37, 57.062% id in 177 aa, and to Pse [...] |
| BP0036 protein network | https://string-db.org/network/257313.BP0036 | Probable acyltransferase; Similar to Neisseria meningitidis lysophosphatidic acid acyltransferase homolog NlaB or NMA0404 TR:Q9XDL6 (EMBL:AF036242) (247 aa) fasta scores: E(): 4.2e-32, 41.277% id [...] |
| BP0037 protein network | https://string-db.org/network/257313.BP0037 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr5068 protein TR:Q98CP0 (EMBL:AP003005) (252 aa) fasta scores: E(): 3.9e-08, 28.458% id in 253 aa, and to Rhizobium meliloti conserved [...] |
| gloA protein network | https://string-db.org/network/257313.BP0038 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. |
| def1 protein network | https://string-db.org/network/257313.BP0039 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...] |
| BP0043 protein network | https://string-db.org/network/257313.BP0043 | Putative lipase (Pseudogene); (C)7 in pertussis; (C)6 in parapertussis. |
| BP0044 protein network | https://string-db.org/network/257313.BP0044 | Transcriptional regulator; Similar to the C-terminal regions of Vibrio anguillarum transcriptional activator protein VanR SW:VANR_VIBAN (P74946) (240 aa) fasta scores: E(): 6.7e-09, 48.611% id in [...] |
| BP0045 protein network | https://string-db.org/network/257313.BP0045 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0188 TR:Q9I6U6 (EMBL:AE004456) (293 aa) fasta scores: E(): 2e-25, 35.172% id in 290 aa, and to Vibrio cholerae [...] |
| metX protein network | https://string-db.org/network/257313.BP0047 | Probable malate/L-lactate dehydrogenase (Pseudogene); Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. |
| BP0048 protein network | https://string-db.org/network/257313.BP0048 | Similar to Neisseria meningitidis hypothetical protein Nmb0939 TR:Q9JZQ6 (EMBL:AE002445) (193 aa) fasta scores: E(): 8.9e-38, 56.085% id in 189 aa, and to Pseudomonas aeruginosa hypothetical prot [...] |
| BP0049 protein network | https://string-db.org/network/257313.BP0049 | Transposase for IS481 element. |
| ampG protein network | https://string-db.org/network/257313.BP0050 | Putative integral membrane signal transducer protein; Similar to Escherichia coli AmpG protein or b0433 or z0536 or ecs0487 SW:AMPG_ECOLI (P36670) (491 aa) fasta scores: E(): 2.6e-88, 61.168% id [...] |
| BP0053 protein network | https://string-db.org/network/257313.BP0053 | Outer membrane porin protein precursor (Pseudogene); (T)3 in pertussis; TTCAT in parapertussis and bronchiseptica; Belongs to the aspartate/glutamate racemases family. |
| gltK protein network | https://string-db.org/network/257313.BP0055 | Glutamate/aspartate transport ATP-binding protein (pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| gltJ protein network | https://string-db.org/network/257313.BP0056 | Similar to Escherichia coli glutamate/aspartate transport system permease protein GltJ or b0654 SW:GLTJ_ECOLI (P41074) (246 aa) fasta scores: E(): 1.6e-40, 42.623% id in 244 aa, and to Pseudomona [...] |
| BP0057 protein network | https://string-db.org/network/257313.BP0057 | Similar to Escherichia coli amino-acid ABC transporter binding protein precursor YbeJ or b0655 SW:YBEJ_ECOLI (P37902) (302 aa) fasta scores: E(): 2.3e-48, 45.263% id in 285 aa, and to Pseudomonas [...] |
| BP0058 protein network | https://string-db.org/network/257313.BP0058 | Transposase for IS481 element. |
| BP0060 protein network | https://string-db.org/network/257313.BP0060 | Regulatory protein (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to Thiobacillus denitrificans regulatory protein CbbR TR:Q9APD4 (EMBL:AF307090) (316 [...] |
| BP0061 protein network | https://string-db.org/network/257313.BP0061 | Putative DNA-binding protein; Similar to Caulobacter crescentus transcriptional regulator Cro/ci family cc2771 TR:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.001, 36.458% id in 96 aa, an [...] |
| BP0062 protein network | https://string-db.org/network/257313.BP0062 | Hypothetical protein; No significant database matches. |
| BP0063 protein network | https://string-db.org/network/257313.BP0063 | Conserved hypothetical protein; Similar to Pseudomonas aeruginosa hypothetical 29.4 kDa protein TR:Q9RPF6 (EMBL:AF161263) (281 aa) fasta scores: E(): 1.1e-29, 35.294% id in 272 aa, and to Variovo [...] |
| BP0063A protein network | https://string-db.org/network/257313.BP0063A | Putative transposase (partial); Similar to the C-terminal regions of Desulfovibrio vulgaris transposase OrfB SWALL:O31218 (EMBL:AF034211) (310 aa) fasta scores: E(): 6.6e-09, 51.47% id in 68 aa, [...] |
| BP0064 protein network | https://string-db.org/network/257313.BP0064 | Similar to Pseudomonas aeruginosa hypothetical protein PA4336 TR:Q9HW65 (EMBL:AE004850) (194 aa) fasta scores: E(): 5.5e-52, 66.492% id in 191 aa, and to Agrobacterium tumefaciens Agr_l_853p agr_ [...] |
| BP0065 protein network | https://string-db.org/network/257313.BP0065 | Putative ferredoxin; Similar to Marinosulfonomonas methylotropha ferredoxin TR:AAK84303 (EMBL:AF354805) (123 aa) fasta scores: E(): 1.8e-07, 35.955% id in 89 aa, and to Burkholderia cepacia Tbc2C [...] |
| BP0066 protein network | https://string-db.org/network/257313.BP0066 | Oxidoreductase; Similar to Marinosulfonomonas methylotropha reductase TR:AAK84310 (EMBL:AF360864) (364 aa) fasta scores: E(): 3.5e-26, 29.830% id in 352 aa, and to Alcaligenes faecalis ferredoxin [...] |
| BP0067 protein network | https://string-db.org/network/257313.BP0067 | Integral membrane protein; Similar to Pseudomonas aeruginosa probable C4-dicarboxylate transporter pa0886 TR:Q9I559 (EMBL:AE004523) (427 aa) fasta scores: E(): 2.3e-37, 32.812% id in 384 aa, and [...] |
| BP0069 protein network | https://string-db.org/network/257313.BP0069 | Putative membrane protein (pseudogene); (TG)2 in pertussis; (TG)1 in bronchiseptica and parapertussis. |
| BP0071 protein network | https://string-db.org/network/257313.BP0071 | Putative hydroxylase beta subunit (Pseudogene); Inverted repeat for IS481 element. |
| BP0072 protein network | https://string-db.org/network/257313.BP0072 | Transposase; Similar to Rhizobium meliloti transposase for insertion sequence element IsrM1 TR:CAC47072 (EMBL:AL591790) (123 aa) fasta scores: E(): 1.1, 21.212% id in 99 aa, and to Caulobacter cr [...] |
| htpG protein network | https://string-db.org/network/257313.BP0074 | tRNA-Leu; Molecular chaperone. Has ATPase activity. |
| BP0075 protein network | https://string-db.org/network/257313.BP0075 | Similar to Rhodococcus spAD45 glutathione S-transferase IsoJ TR:Q9RBP3 (EMBL:AJ249207) (233 aa) fasta scores: E(): 2.2e-12, 30.732% id in 205 aa, and to Pseudomonas aeruginosa probable glutathion [...] |
| ampD protein network | https://string-db.org/network/257313.BP0076 | N-acetylmuramoyl-L-alanine amidase; Similar to Escherichia coli AmpD protein or b0110 SW:AMPD_ECOLI (P13016) (183 aa) fasta scores: E(): 5e-35, 51.977% id in 177 aa, and to Pseudomonas aeruginosa [...] |
| BP0077 protein network | https://string-db.org/network/257313.BP0077 | Putative exported protein; Similar to Pseudomonas stutzeri hypothetical 9.0 kDa protein TR:Q9RLD2 (EMBL:AJ249642) (77 aa) fasta scores: E(): 0.021, 33.333% id in 81 aa. |
| BP0078 protein network | https://string-db.org/network/257313.BP0078 | Putative membrane protein; Similar to Neisseria meningitidis hypothetical inner membrane protein nma2189 TR:Q9JSQ1 (EMBL:AL162758) (268 aa) fasta scores: E(): 2.2e-25, 37.184% id in 277 aa, and t [...] |
| ffh protein network | https://string-db.org/network/257313.BP0079 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...] |
| BP0080 protein network | https://string-db.org/network/257313.BP0080 | Transposase for IS481 element. |
| bplL protein network | https://string-db.org/network/257313.BP0082 | Inverted repeat for IS1002 element. |
| bplI protein network | https://string-db.org/network/257313.BP0085 | Putative integral membrane protein (Pseudogene); (TG)2 in pertussis; (TG)1 in parapertussis and bronchiseptica. |
| bplH protein network | https://string-db.org/network/257313.BP0086 | Putative glycosyl transferase; Identical to the previously sequenced Bordetella parapertussis putative glcnac transferase WlbH TR:O52848 (EMBL:AJ224768) (390 aa) fasta scores: E(): 1.1e-153, 99.4 [...] |
| bplG protein network | https://string-db.org/network/257313.BP0087 | Probable sugar transferase; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplG TR:Q45382 (EMBL:X90711) (197 aa) fasta scores: E(): 2.6e- [...] |
| bplF protein network | https://string-db.org/network/257313.BP0088 | Lipopolysaccharide biosynthesis protein; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplF TR:Q45381 (EMBL:X90711) (395 aa) fasta score [...] |
| bplE protein network | https://string-db.org/network/257313.BP0089 | Probable glycosyl transferase; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplE TR:Q45380 (EMBL:X90711) (403 aa) fasta scores: E(): 1. [...] |
| bplD protein network | https://string-db.org/network/257313.BP0090 | UDP-N-acetylglucosamine 2-epimerase; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplD TR:Q45379 (EMBL:X90711) (362 aa) fasta scores: E [...] |
| bplC protein network | https://string-db.org/network/257313.BP0091 | Lipopolysaccharide biosynthesis protein; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus BplC TR:Q45378 (EMBL:X90711) (366 aa) fasta score [...] |
| bplB protein network | https://string-db.org/network/257313.BP0092 | Probable acetyltransferase; Identical to the previously sequenced Bordetella pertussis and Bordetella bronchiseptica DNA for lipopolysaccharide biosynthesis locus BplB or WlbB TR:Q45377 (EMBL:X90 [...] |
| bplA protein network | https://string-db.org/network/257313.BP0093 | Probable oxidoreductase; Identical to Bordetella pertussis and Bordetella bronchiseptica DNA for lipopolysaccharide biosynthesis locus BplA or WlbA TR:Q45376 (EMBL:X90711) (350 aa) fasta scores: [...] |
| rfaC protein network | https://string-db.org/network/257313.BP0094 | Probable heptosyltransferase; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus RfaC TR:Q45375 (EMBL:X90711) (335 aa) fasta scores: E(): 6.2 [...] |
| kdtA protein network | https://string-db.org/network/257313.BP0095 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV( [...] |
| BP0096 protein network | https://string-db.org/network/257313.BP0096 | Putative exported protein; Identical to the previously sequenced Bordetella bronchiseptica putative secreted protein Bblps1.35C TR:O88004 (EMBL:AJ007747) (51 aa) fasta scores: E(): 2.6e-20, 100.0 [...] |
| baf protein network | https://string-db.org/network/257313.BP0097 | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. |
| birA protein network | https://string-db.org/network/257313.BP0098 | Putative biotin protein ligase; Identical to the previously sequenced Bordetella pertussis putative biotin protein ligase BirA TR:Q9ZIU6 (EMBL:AF016461) (288 aa) fasta scores: E(): 1.2e-110, 100. [...] |
| BP0099 protein network | https://string-db.org/network/257313.BP0099 | Putative integral membrane protein; Similar to Caulobacter crescentus putative ABC transporter, permease protein, Cc2318 TR:Q9A5X9 (EMBL:AE005902) (371 aa) fasta scores: E(): 2.2e-35, 35.925% id [...] |
| BP0100 protein network | https://string-db.org/network/257313.BP0100 | Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3212 TR:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 1.3e-42, 54.251% id in 247 aa, and to Caulobacter [...] |
| BP0101A protein network | https://string-db.org/network/257313.BP0101A | Putative exported protein (Pseudogene); CA in pertussis; CA(GG) in parapertussis and bronchiseptica. |
| BP0101B protein network | https://string-db.org/network/257313.BP0101B | Similar to Neisseria meningitidis hypothetical protein Nmb0868 TR:Q9JZW7 (EMBL:AE002439) (213 aa) fasta scores: E(): 4.5e-24, 43.578% id in 218 aa, and to Pseudomonas aeruginosa hypothetical prot [...] |
| BP0102 protein network | https://string-db.org/network/257313.BP0102 | Similar to Escherichia coli penicillin-binding protein 6 precursor DacC or B0839 SW:DACC_ECOLI (P08506) (400 aa) fasta scores: E(): 3.9e-51, 46.703% id in 364 aa, and to Pseudomonas aeruginosa pe [...] |
| BP0103 protein network | https://string-db.org/network/257313.BP0103 | Probable class IV aminotransferase; Similar to Staphylococcus aureus D-alanine aminotransferase TR:Q9KWZ6 (EMBL:Y14816) (282 aa) fasta scores: E(): 3.7e-37, 38.849% id in 278 aa, and to Staphyloc [...] |
| BP0104 protein network | https://string-db.org/network/257313.BP0104 | Similar to Neisseria meningitidis hypothetical protein Nma1380 or Nmb1218 TR:Q9JRI4 (EMBL:AL162755) (91 aa) fasta scores: E(): 4.4e-11, 46.988% id in 83 aa, and to Escherichia coli hypothetical p [...] |
| lipB protein network | https://string-db.org/network/257313.BP0105 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...] |
| lipA protein network | https://string-db.org/network/257313.BP0106 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...] |
| rfbC protein network | https://string-db.org/network/257313.BP0107 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehy [...] |
| rfbD protein network | https://string-db.org/network/257313.BP0108 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. |
| rfbB protein network | https://string-db.org/network/257313.BP0109 | Similar to Escherichia coli dTDP-glucose 4,6-dehydratase RfbB or RmlB or B2041 SW:RBB1_ECOLI (P37759) (361 aa) fasta scores: E(): 4.6e-73, 52.925% id in 359 aa, and to Pseudomonas aeruginosa dTDP [...] |
| BP0110 protein network | https://string-db.org/network/257313.BP0110 | Transposase for IS481 element. |
| metC protein network | https://string-db.org/network/257313.BP0112 | Putative membrane protein (pseudogene); Signal peptide predicted for BP0111 by SignalP 2.0 HMM (Signal peptide probabilty 0.944) with cleavage site probability 0.242 between residues 40 and 41. |
| dsbA protein network | https://string-db.org/network/257313.BP0113 | Thiol:disulfide interchange protein DsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins (By similarity). Required for periplasmic assem [...] |
| BP0114 protein network | https://string-db.org/network/257313.BP0114 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa5052 TR:Q9HUC7 (EMBL:AE004918) (231 aa) fasta scores: E(): 0.001, 28.807% id in 243 aa, and to Xylella fastidio [...] |
| argS protein network | https://string-db.org/network/257313.BP0115 | Similar to Xylella fastidiosa arginyl-tRNA synthetase Xf0147 TR:Q9PGZ9 (EMBL:AE003868) (586 aa) fasta scores: E(): 4e-103, 52.700% id in 537 aa, and to Staphylococcus aureus subspaureus N315. arg [...] |
| BP0116 protein network | https://string-db.org/network/257313.BP0116 | Similar to Ralstonia solanacearum hypothetical protein Rsc0288 or Rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 0.0019, 32.74% id in 113 aa. |
| BP0117 protein network | https://string-db.org/network/257313.BP0117 | Hypothetical protein; No significant database matches. |
| BP0118 protein network | https://string-db.org/network/257313.BP0118 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP0119 protein network | https://string-db.org/network/257313.BP0119 | Inner membrane component of binding-protein-dependent transport system; Similar to Thermotoga maritima sugar ABC transporter, permease protein Tm0598 TR:Q9WZ67 (EMBL:AE001734) (277 aa) fasta scor [...] |
| BP0120 protein network | https://string-db.org/network/257313.BP0120 | Inner membrane component of binding-protein-dependent transport system; Similar to Erwinia chrysanthemi inner membrane protein togM TR:CAC44118 (EMBL:AJ305144) (296 aa) fasta scores: E(): 9.7e-31 [...] |
| BP0121 protein network | https://string-db.org/network/257313.BP0121 | Probable extracellular solute-binding protein; Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E [...] |
| BP0122 protein network | https://string-db.org/network/257313.BP0122 | Sugar ABC transporter, ATP-binding protein; Similar to Thermococcus litoralis trehalose/maltose transport ATP-hydrolyzing subunit MalK TR:Q9V306 (EMBL:AF126010) (372 aa) fasta scores: E(): 7.4e-4 [...] |
| cpdA protein network | https://string-db.org/network/257313.BP0123 | Putative cAMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. |
| BP0124 protein network | https://string-db.org/network/257313.BP0124 | Probable ABC transporter, ATP-binding protein (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. The IS insertion occurred near the C-terminal end (following codon [...] |
| BP0126 protein network | https://string-db.org/network/257313.BP0126 | Similar to Rhizobium loti ABC transporter, permease Mlr9016 TR:Q982L0 (EMBL:AP003015) (278 aa) fasta scores: E(): 9.8e-17, 31.395% id in 258 aa, and to Treponema pallidum spermidine/putrescine AB [...] |
| BP0128 protein network | https://string-db.org/network/257313.BP0128 | Probable Binding-protein-dependent transport system, permease protein (Pseudogene); (G)4 in pertussis; (G)5 in parapertussis. |
| BP0130 protein network | https://string-db.org/network/257313.BP0130 | Probable LacI-family transcriptional regulator (Pseudogene); (GC)4 in pertussis; (GC)5 in parapertussis. |
| leuA protein network | https://string-db.org/network/257313.BP0131 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...] |
| BP0132 protein network | https://string-db.org/network/257313.BP0132 | Putative membrane protein; No significant database matches. |
| rpoN protein network | https://string-db.org/network/257313.BP0133 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. |
| BP0134 protein network | https://string-db.org/network/257313.BP0134 | Similar to Azotobacter vinelandii bacterioferritin-associated ferredoxin Bfd TR:Q9Z5W9 (EMBL:AF121138) (73 aa) fasta scores: E(): 0.004, 40.426% id in 47 aa, and to Neisseria meningitidis putativ [...] |
| BP0135 protein network | https://string-db.org/network/257313.BP0135 | Similar to Escherichia coli probable transcriptional regulator LrhA or GenR or B2289 SW:LRHA_ECOLI (P36771) (312 aa) fasta scores: E(): 5.4e-21, 33.212% id in 274 aa, and to Rhizobium meliloti pu [...] |
| ilvA protein network | https://string-db.org/network/257313.BP0139 | C-terminal region of an outer membrane porin (Pseudogene); Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a deh [...] |
| BP0141 protein network | https://string-db.org/network/257313.BP0141 | Conserved hypothetical protein (pseudogene); TAG stop in pertussis; CAG in parapertussis. |
| BP0142 protein network | https://string-db.org/network/257313.BP0142 | Similar to Deinococcus radiodurans transcriptional regulator, GntR family Dr0815 TR:Q9RW54 (EMBL:AE001936) (267 aa) fasta scores: E(): 1.7e-09, 30.041% id in 243 aa, and to Bacillus subtilis hypo [...] |
| BP0143 protein network | https://string-db.org/network/257313.BP0143 | Conserved hypothetical protein; Identical to the N-terminal region of Bordetella pertussis hypothetical 29.3 kDa protein TR:O30450 (EMBL:AF006000) (273 aa) fasta scores: E(): 9.8e-105, 100.000% i [...] |
| BP0144 protein network | https://string-db.org/network/257313.BP0144 | Putative lipase; This CDS start with an isoleucine, whereas parapertussis and bronchiseptica start with a methionine. The sequence has been checked and believed to be correct. Identical to the pr [...] |
| BP0145 protein network | https://string-db.org/network/257313.BP0145 | Putative enoyl-CoA hydratase/isomerase; Identical to the previously sequenced Bordetella pertussis hypothetical 29.5 kDa protein TR:O30448 (EMBL:AF006000) (270 aa) fasta scores: E(): 3e-109, 100. [...] |
| BP0148 protein network | https://string-db.org/network/257313.BP0148 | Putative hydroxylase (Pseudogene); Signal peptide predicted for BP0147 by SignalP 2.0 HMM (Signal peptide probabilty 0.926) with cleavage site probability 0.464 between residues 18 and 19. |
| BP0149 protein network | https://string-db.org/network/257313.BP0149 | Probable transcriptional regulator; Identical to the previously sequenced Bordetella pertussis hypothetical 29.0 kDa protein TR:O30445 (EMBL:AF006000) (260 aa) fasta scores: E(): 2.1e-107, 100.00 [...] |
| BP0151 protein network | https://string-db.org/network/257313.BP0151 | Conserved hypothetical protein (Pseudogene); (C)3 in pertussis; (C)2 in parapertussis. |
| BP0152 protein network | https://string-db.org/network/257313.BP0152 | Conserved hypothetical protein; Identical to the previously sequenced Bordetella pertussis hypothetical 59.5 kDa protein TR:O30443 (EMBL:AF006000) (568 aa) fasta scores: E(): 3.9e-82, 99.103% id [...] |
| BP0153 protein network | https://string-db.org/network/257313.BP0153 | Probable dioxygenase; Identical to the previously sequenced Bordetella pertussis hypothetical 15.6 kDa protein TR:O30442 (EMBL:AF006000) (143 aa) fasta scores: E(): 6.4e-60, 100.000% id in 143 aa [...] |
| brg1 protein network | https://string-db.org/network/257313.BP0154 | LysR family transcriptional regulator; Identical to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 6.6e-108, 99.656% id in 291 aa, and si [...] |
| serA protein network | https://string-db.org/network/257313.BP0155 | D-3-phosphoglycerate dehydrogenase; Identical to the previously sequenced Bordetella pertussis D-3-phosphoglycerate dehydrogenase homolog SerA TR:O30440 (EMBL:AF006000) (399 aa) fasta scores: E() [...] |
| BP0156 protein network | https://string-db.org/network/257313.BP0156 | Putative exported protein; Similar to Pasteurella multocida hypothetical protein Pm1939 TR:Q9CJQ5 (EMBL:AE006230) (151 aa) fasta scores: E(): 1.5e-25, 51.370% id in 146 aa, and to Pseudomonas aer [...] |
| BP0157 protein network | https://string-db.org/network/257313.BP0157 | Two-component sensor kinase; Member of a two-component regulatory system. |
| BP0158 protein network | https://string-db.org/network/257313.BP0158 | Two-component response regulator; Similar to Escherichia coli transcriptional regulatory protein PcoR SW:PCOR_ECOLI (Q47456) (226 aa) fasta scores: E(): 4.7e-46, 53.846% id in 221 aa, and to Pseu [...] |
| phoR protein network | https://string-db.org/network/257313.BP0159 | Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or B0400 SW:PHOR_ECOLI (P08400) (431 aa) fasta scores: E(): 1e-55, 41.458% id in 439 aa, and to Klebsiella pneumoniae pho [...] |
| phoB protein network | https://string-db.org/network/257313.BP0160 | Similar to Escherichia coli phosphate regulon transcriptional regulatory protein PhoB or B0399 or Z0497 or ECS0449 SW:PHOB_ECOLI (P08402) (229 aa) fasta scores: E(): 2.6e-52, 59.211% id in 228 aa [...] |
| ubiE protein network | https://string-db.org/network/257313.BP0161 | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methox [...] |
| BP0162 protein network | https://string-db.org/network/257313.BP0162 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa5528 TR:Q9HT45 (EMBL:AE004965) (284 aa) fasta scores: E(): 1.7e-05, 35.294% id in 323 aa, and to Agrobacterium [...] |
| BP0163 protein network | https://string-db.org/network/257313.BP0163 | Similar to Escherichia coli hypothetical 22.2 kDa protein in ubiE-rfaH intergenic region YigP or B3834 SW:YIGP_ECOLI (P27852) (201 aa) fasta scores: E(): 0.0058, 27.397% id in 219 aa, and to Vibr [...] |
| ubiB protein network | https://string-db.org/network/257313.BP0164 | Probable ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. Ub [...] |
| BP0168 protein network | https://string-db.org/network/257313.BP0168 | C-terminal region of a probable ABC transporter, ATP-binding protein (Pseudogene); (G)1 in pertussis; (G)2 in parapertussis. |
| BP0169 protein network | https://string-db.org/network/257313.BP0169 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0537 TR:Q9I5Z9 (EMBL:AE004490) (202 aa) fasta scores: E(): 8.8e-51, 71.981% id in 207 aa, and to Rhizobium loti [...] |
| rhlE protein network | https://string-db.org/network/257313.BP0170 | Putative ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. |
| BP0171 protein network | https://string-db.org/network/257313.BP0171 | LysE family efflux protein; Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or B3824 SW:RHTB_ECOLI (P27847) (206 aa) fasta scores: E(): 2e-23, 37.198% id in 207 aa, [...] |
| prfC protein network | https://string-db.org/network/257313.BP0172 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...] |
| BP0173 protein network | https://string-db.org/network/257313.BP0173 | Putative exported protein; Similar to Mycobacterium leprae hypothetical proline rich protein Ml1505 TR:Q9CBW9 (EMBL:AL583922) (182 aa) fasta scores: E(): 7, 23.977% id in 171 aa. |
| bfr protein network | https://string-db.org/network/257313.BP0174 | Bacterioferritin; Iron-storage protein. |
| BP0175 protein network | https://string-db.org/network/257313.BP0175 | Transposase for IS481 element. |
| BP0177 protein network | https://string-db.org/network/257313.BP0177 | Two-component response regulator (Pseudogene); G in pertussis; G(TG) in parapertussis. |
| BP0178 protein network | https://string-db.org/network/257313.BP0178 | Putative lipoprotein; Similar to Synechocystis sp hypothetical 31.6 kDa protein slr0841 TR:Q55426 (EMBL:D64003) (291 aa) fasta scores: E(): 0.00023, 33.775% id in 151 aa. Its N-terminal region is [...] |
| BP0179 protein network | https://string-db.org/network/257313.BP0179 | Similar to Xylella fastidiosa hypothetical protein Xf2609 TR:Q9PAA9 (EMBL:AE004068) (299 aa) fasta scores: E(): 9.9e-46, 55.230% id in 239 aa, and to Pseudomonas aeruginosa hypothetical protein P [...] |
| metG protein network | https://string-db.org/network/257313.BP0180 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. |
| BP0181 protein network | https://string-db.org/network/257313.BP0181 | Putative exported protein; Similar to Rhizobium meliloti hypothetical/unknown transmembrane protein Smc03794 TR:CAC47756 (EMBL:AL591793) (83 aa) fasta scores: E(): 4.5, 30.488% id in 82 aa. |
| BP0182 protein network | https://string-db.org/network/257313.BP0182 | Putative iron sulfur binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. |
| BP0183 protein network | https://string-db.org/network/257313.BP0183 | Putative exported protein; Similar to Xanthomonas oryzae pvoryzae putative outer membrane protein TR:Q9EY32 (EMBL:AY010120) (593 aa) fasta scores: E(): 8.2e-16, 24.540% id in 652 aa, and to Pseud [...] |
| BP0184 protein network | https://string-db.org/network/257313.BP0184 | Putative exported protein; Similar to Neisseria meningitidis putative periplasmic protein Nma0295 TR:Q9JWM6 (EMBL:AL162752) (1371 aa) fasta scores: E(): 1.4e-18, 23.644% id in 1383 aa, and to Pse [...] |
| dcd protein network | https://string-db.org/network/257313.BP0185 | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. |
| BP0186 protein network | https://string-db.org/network/257313.BP0186 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0803 TR:Q9I5D5 (EMBL:AE004515) (146 aa) fasta scores: E(): 1.4e-32, 61.111% id in 144 aa, and to Rhizobium loti Mlr1197 protein TR:Q98L34 [...] |
| BP0187 protein network | https://string-db.org/network/257313.BP0187 | Putative lyase; Similar to Streptomyces coelicolor putative lyase Sci7.11C TR:Q9X9X9 (EMBL:AL096743) (130 aa) fasta scores: E(): 0.0041, 33.846% id in 130 aa, and to Streptomyces sp daunomycin C- [...] |
| BP0189 protein network | https://string-db.org/network/257313.BP0189 | Putative acetyltransferase (Pseudogene); (T)5 in pertussis; (T)3 in parapertussis. |
| BP0190 protein network | https://string-db.org/network/257313.BP0190 | Probable orn/arg/lys decarboxylase; Similar to Escherichia coli biodegradative arginine decarboxylase AdiA or Adi or B4117 SW:ADIA_ECOLI (P28629) (755 aa) fasta scores: E(): 4.9e-69, 38.070% id i [...] |
| BP0191 protein network | https://string-db.org/network/257313.BP0191 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Smc00763 TR:CAC45279 (EMBL:AL591784) (394 aa) fasta scores: E(): 4.8e-59, 57.431% id in 397 aa, and to Haem [...] |
| BP0192 protein network | https://string-db.org/network/257313.BP0192 | Transposase for IS481 element. |
| sodA protein network | https://string-db.org/network/257313.BP0193 | Superoxide dismutase [Mn]; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dism [...] |
| BP0194 protein network | https://string-db.org/network/257313.BP0194 | Probable metal transporter; Similar to Pseudomonas aeruginosa hypothetical protein Pa4467 TR:Q9HVV1 (EMBL:AE004860) (310 aa) fasta scores: E(): 2.5e-41, 54.864% id in 257 aa, and to Myxococcus xa [...] |
| gcvT protein network | https://string-db.org/network/257313.BP0195 | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. |
| gcvH protein network | https://string-db.org/network/257313.BP0196 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. |
| gcvP protein network | https://string-db.org/network/257313.BP0197 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...] |
| BP0198 protein network | https://string-db.org/network/257313.BP0198 | Similar to Escherichia coli putative L-lactate dehydrogenase operon regulatory protein LldR or LctR or B3604 SW:LLDR_ECOLI (P33233) (258 aa) fasta scores: E(): 4.3e-12, 31.915% id in 235 aa, and [...] |
| BP0199 protein network | https://string-db.org/network/257313.BP0199 | Conserved hypothetical protein; Similar to Rhizobium meliloti putative conserved membrane-anchored protein Smb21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 2e-56, 40.769% id in 39 [...] |
| BP0200 protein network | https://string-db.org/network/257313.BP0200 | Putative exported protein; Similar to Pseudomonas putida and Pseudomonas sp hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E( [...] |
| BP0202 protein network | https://string-db.org/network/257313.BP0202 | Probable enoyl-CoA hydratase (Pseudogene); Inverted repeat for IS481 element. |
| BP0203 protein network | https://string-db.org/network/257313.BP0203 | Transposase (pseudogene); Inverted repeat for IS481 element. |
| BP0204 protein network | https://string-db.org/network/257313.BP0204 | Similar to Escherichia coli EcoVIII restriction endonuclease TR:Q46974 (EMBL:U48806) (333 aa) fasta scores: E(): 9.4e-22, 34.677% id in 248 aa, and to Haemophilus influenzae type II restriction e [...] |
| BP0205 protein network | https://string-db.org/network/257313.BP0205 | Putative exported protein; Similar to the C-terminal regions of Thermus thermophilus nusA/infB operon DNA TR:Q56428 (EMBL:Z48001) (275 aa) fasta scores: E(): 0.00019, 39.583% id in 96 aa, and to [...] |
| thiC protein network | https://string-db.org/network/257313.BP0206 | Thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine [...] |
| BP0207 protein network | https://string-db.org/network/257313.BP0207 | Similar to Rhizobium meliloti putative aldehyde dehydrogenase Smb20891 TR:CAC49585 (EMBL:AL603646) (477 aa) fasta scores: E(): 5.1e-123, 68.697% id in 476 aa, and to Rhizobium loti aldehyde dehyd [...] |
| BP0208 protein network | https://string-db.org/network/257313.BP0208 | Similar to Rhizobium loti putative oxidoreductase Mlr7440 TR:Q986B0 (EMBL:AP003011) (476 aa) fasta scores: E(): 8.5e-78, 46.970% id in 462 aa, and to Rhizobium meliloti putative oxidoreductase pr [...] |
| BP0209 protein network | https://string-db.org/network/257313.BP0209 | Similar to Rhizobium meliloti putative GntR-family transcriptional regulator Sma0246 TR:AAK64788 (EMBL:AE007207) (233 aa) fasta scores: E(): 4e-20, 36.771% id in 223 aa, and to Rhizobium loti tra [...] |
| BP0210 protein network | https://string-db.org/network/257313.BP0210 | Transposase for IS481 element. |
| BP0211 protein network | https://string-db.org/network/257313.BP0211 | Transposase for IS481 element. |
| vgb protein network | https://string-db.org/network/257313.BP0212 | Putative hydrolase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl [...] |
| BP0213 protein network | https://string-db.org/network/257313.BP0213 | Putative acetyltransferase; Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Pat SW:PAT_ALCFA (P31668) (197 aa) fasta scores: E(): 1.4e-35, 59.884% id in 172 aa, and to Caulob [...] |
| queC protein network | https://string-db.org/network/257313.BP0214 | Conserved hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. |
| ppc protein network | https://string-db.org/network/257313.BP0215 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. |
| sphB1 protein network | https://string-db.org/network/257313.BP0216 | Previously sequenced as Bordetella pertussis autotransporter subtilisin-like protease SphB1 TR:CAC44081 (EMBL:AJ318229) (1039 aa) fasta scores: E(): 0, 100.000% id in 932 aa, and dimilar to Xylel [...] |
| BP0217 protein network | https://string-db.org/network/257313.BP0217 | Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydrogenase Hbd or Cac2708 SW:HBD_CLOAB (P52041) (282 aa) fasta scores: E(): 7.6e-33, 42.199% id in 282 aa, and to Rhizobium loti 3-hy [...] |
| BP0218 protein network | https://string-db.org/network/257313.BP0218 | Similar to Escherichia coli short-chain fatty acids transporter AtoE or B2223 SW:ATOE_ECOLI (P76460) (440 aa) fasta scores: E(): 1.4e-62, 39.636% id in 439 aa, and to Alcaligenes eutrophus hypoth [...] |
| BP0219 protein network | https://string-db.org/network/257313.BP0219 | Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa4162 TR:Q9HWL9 (EMBL:AE004832) (238 aa) fasta scores: E(): 3.1e-29, 45.887% id in 231 aa, and to Streptomyces coelicolor put [...] |
| BP0220 protein network | https://string-db.org/network/257313.BP0220 | Probable transcriptional regulator; Similar to Rhodococcus opacus PcaR TR:O67983 (EMBL:AF003947) (265 aa) fasta scores: E(): 1.2e-41, 50.602% id in 249 aa, and to Rhizobium meliloti putative tran [...] |
| catI protein network | https://string-db.org/network/257313.BP0221 | Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SW:PCAI_PSEPU (Q01103) (231 aa) fasta scores: E(): 3.6e-59, 71.689% id in 219 aa, and to Acinetobacter calcoaceticus 3-ox [...] |
| catJ protein network | https://string-db.org/network/257313.BP0222 | Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SW:PCAJ_PSEPU (Q01104) (212 aa) fasta scores: E(): 1.9e-53, 66.190% id in 210 aa, and to Acinetobacter calcoaceticus 3-ox [...] |
| catC2 protein network | https://string-db.org/network/257313.BP0223 | Similar to Alcaligenes eutrophus methylmuconolactone isomerase MmlJ TR:O51800 (EMBL:X99639) (91 aa) fasta scores: E(): 5.3e-23, 63.736% id in 91 aa, and to Acinetobacter lwoffii muconolactone del [...] |
| BP0224 protein network | https://string-db.org/network/257313.BP0224 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus hypothetical 11.0 kDa protein TR:Q9F188 (EMBL:AF042280) (98 aa) fasta scores: E(): 6.7e-25, 65.306% id in 98 aa, and to Caulobacte [...] |
| catD2 protein network | https://string-db.org/network/257313.BP0225 | Similar to Alcaligenes eutrophus 3-oxoadipate enol-lactone hydrolase CatD2 TR:Q9EV45 (EMBL:AF042280) (259 aa) fasta scores: E(): 4.2e-56, 58.915% id in 258 aa, and to Pseudomonas putida PcaD-like [...] |
| BP0226 protein network | https://string-db.org/network/257313.BP0226 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 34.1 kDa protein Scif3.09C TR:CAC37528 (EMBL:AL590982) (320 aa) fasta scores: E(): 1e-08, 33.529% id in 340 aa. |
| psiF protein network | https://string-db.org/network/257313.BP0227 | Similar to Escherichia coli phosphate starvation-inducible protein PsiF precursor or B0384 SW:PSIF_ECOLI (P27295) (106 aa) fasta scores: E(): 0.00082, 51.220% id in 82 aa, and to Pseudomonas aeru [...] |
| BP0228 protein network | https://string-db.org/network/257313.BP0228 | Transposase for IS481 element. |
| BP0229 protein network | https://string-db.org/network/257313.BP0229 | Similar to Pseudomonas putida beta-D-hydroxybutyrate dehydrogenase BdhA TR:Q9AE70 (EMBL:AJ310211) (256 aa) fasta scores: E(): 1.6e-35, 45.349% id in 258 aa, and to Pseudomonas SpGM101 beta-hydrox [...] |
| pcaC protein network | https://string-db.org/network/257313.BP0231 | Conserved hypothetical protein (Pseudogene); ScanRegExp hit to PS00136, Serine proteases, subtilase family, aspartic acid active site. |
| BP0233 protein network | https://string-db.org/network/257313.BP0233 | Probable oxidoreductase (Pseudogene); ScanRegExp hit to PS00687, Aldehyde dehydrogenases glutamic acid active site. |
| BP0234 protein network | https://string-db.org/network/257313.BP0234 | Similar to Rhodobacter capsulatus C4-dicarboxylate-binding periplasmic protein precursor DctP SW:DCTP_RHOCA (P37735) (333 aa) fasta scores: E(): 1.5e-08, 24.074% id in 324 aa, and to Rhizobium me [...] |
| BP0235 protein network | https://string-db.org/network/257313.BP0235 | Putative membrane protein; Similar to Pasteurella multocida hypothetical protein Pm1708 TR:Q9CKB6 (EMBL:AE006207) (634 aa) fasta scores: E(): 7e-37, 27.192% id in 673 aa, and to Haemophilus influ [...] |
| BP0237 protein network | https://string-db.org/network/257313.BP0237 | Conserved hypothetical protein (Pseudogene); ScanRegExp hit to PS00211, ABC transporters family signature. |
| folK protein network | https://string-db.org/network/257313.BP0238 | Similar to Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or B0142 SW:HPPK_ECOLI (P26281) (158 aa) fasta scores: E(): 3.4e-15, 38.854% id in 157 aa, and [...] |
| pcnB protein network | https://string-db.org/network/257313.BP0239 | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencin [...] |
| BP0240 protein network | https://string-db.org/network/257313.BP0240 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0335 TR:Q9I6F6 (EMBL:AE004471) (217 aa) fasta scores: E(): 1e-33, 46.575% id in 219 aa, and to Neisseria meningitidis hypothetical protein [...] |
| BP0241 protein network | https://string-db.org/network/257313.BP0241 | Similar to Neisseria meningitidis hypothetical protein Nma1279 TR:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 1e-19, 35.470% id in 234 aa, and to Escherichia coli hypothetical protein yfge [...] |
| purM protein network | https://string-db.org/network/257313.BP0242 | Similar to Escherichia coli phosphoribosylformylglycinamidine cyclo-ligase PurM or PurG or B2499 SW:PUR5_ECOLI (P08178) (344 aa) fasta scores: E(): 1.5e-71, 56.598% id in 341 aa, and to Neisseria [...] |
| miaA protein network | https://string-db.org/network/257313.BP0243 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...] |
| mutL protein network | https://string-db.org/network/257313.BP0244 | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker' [...] |
| dedA protein network | https://string-db.org/network/257313.BP0245 | Putative membrane protein; Similar to Escherichia coli Deda protein or B2317 or Z3579 or Ecs3201 SW:DEDA_ECOLI (P09548) (219 aa) fasta scores: E(): 6.7e-36, 51.485% id in 202 aa, and to Burkholde [...] |
| amiC protein network | https://string-db.org/network/257313.BP0246 | Similar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiC precursor or B2817 SW:AMIC_ECOLI (Q46929) (417 aa) fasta scores: E(): 8.8e-41, 50.608% id in 411 aa, and to Pseudomonas aerugin [...] |
| BP0247 protein network | https://string-db.org/network/257313.BP0247 | Similar to Escherichia coli hypothetical protein YjeE or B4168 or Z5775 or Ecs5144 SW:YJEE_ECOLI (P31805) (153 aa) fasta scores: E(): 1.6e-19, 44.218% id in 147 aa, and to Neisseria meningitidis [...] |
| fumC protein network | https://string-db.org/network/257313.BP0248 | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily [...] |
| BP0249 protein network | https://string-db.org/network/257313.BP0249 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa5466 TR:Q9HTA4 (EMBL:AE004959) (314 aa) fasta scores: E(): 1.1e-31, 43.189% id in 301 aa, and to Rhizobium meli [...] |
| BP0250 protein network | https://string-db.org/network/257313.BP0250 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-49, 44.207% id in 328 aa, and to Comam [...] |
| BP0251 protein network | https://string-db.org/network/257313.BP0251 | Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 5.5e-19, 32.155% id in 283 aa, and to Rhizobium loti transcriptional [...] |
| ggt protein network | https://string-db.org/network/257313.BP0252 | Similar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or B3447 SW:GGT_ECOLI (P18956) (580 aa) fasta scores: E(): 1.6e-52, 35.484% id in 589 aa, and to Vibrio cholerae gamma-gluta [...] |
| BP0253 protein network | https://string-db.org/network/257313.BP0253 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 TR:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.4e-94, 68.144% id in 361 aa, and to Rhizobium meliloti putative conserved mem [...] |
| BP0254 protein network | https://string-db.org/network/257313.BP0254 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-48, 45.122% id in 328 aa, and to Comam [...] |
| BP0258 protein network | https://string-db.org/network/257313.BP0258 | ScanRegExp hit to PS01156, TonB-dependent receptor proteins signature 2; Belongs to the GbsR family. |
| cydA protein network | https://string-db.org/network/257313.BP0259 | Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or B0733 SW:CYDA_ECOLI (P11026) (522 aa) fasta scores: E(): 1.8e-121, 60.980% id in 510 aa, and to Vibrio choler [...] |
| cydB protein network | https://string-db.org/network/257313.BP0260 | Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or B0734 or Z0901 or Ecs0769 SW:CYDB_ECOLI (P11027) (379 aa) fasta scores: E(): 4.5e-71, 50.529% id in 378 aa, [...] |
| BP0261 protein network | https://string-db.org/network/257313.BP0261 | Putative exported protein; Similar to Escherichia coli protein YbgT or B0734.1 SW:YBGT_ECOLI (P56100) (37 aa) fasta scores: E(): 0.00014, 56.250% id in 32 aa, and to Vibrio cholerae hypothetical [...] |
| BP0262 protein network | https://string-db.org/network/257313.BP0262 | Probable ATP-binding component of ABC transporter; Similar to Escherichia coli transport ATP-binding protein CydD or HtrD or B0887 SW:CYDD_ECOLI (P29018) (588 aa) fasta scores: E(): 1.9e-57, 38.5 [...] |
| BP0263 protein network | https://string-db.org/network/257313.BP0263 | Probable ATP-binding component of ABC transporter; Similar to Escherichia coli transport ATP-binding protein CydC or MdrA or MdrH or SurB or B0886 SW:CYDC_ECOLI (P23886) (573 aa) fasta scores: E( [...] |
| apt protein network | https://string-db.org/network/257313.BP0264 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. |
| BP0268 protein network | https://string-db.org/network/257313.BP0268 | N-terminal region of an outer membrane porin (Pseudogene); HMMPfam hit to PF00267, Gram-negative porin. |
| BP0270 protein network | https://string-db.org/network/257313.BP0270 | Hypothetical protein; No significant database matches. |
| BP0271 protein network | https://string-db.org/network/257313.BP0271 | Hypothetical protein; No significant database matches. |
| BP0272 protein network | https://string-db.org/network/257313.BP0272 | Integrase (remnant); Partial CDS. Lacking both the N-terminal region and a stop codon. Similar to Bacteriophage SfII integrase Int TR:O21941 (EMBL:AF021347) (205 aa) fasta scores: E(): 0.024, 33. [...] |
| sspB protein network | https://string-db.org/network/257313.BP0273 | Similar to Escherichia coli stringent starvation protein B SspB or B3228 or Z4586 or Ecs4101 SW:SSPB_ECOLI (P25663) (165 aa) fasta scores: E(): 9.6e-13, 40.845% id in 142 aa, and to Neisseria men [...] |
| sspA protein network | https://string-db.org/network/257313.BP0274 | Similar to Escherichia coli stringent starvation protein A SspA or Ssp or Pog or B3229 SW:SSPA_ECOLI (P05838) (211 aa) fasta scores: E(): 5.4e-29, 42.857% id in 203 aa, and to Neisseria meningiti [...] |
| petC protein network | https://string-db.org/network/257313.BP0275 | Similar to Chromatium vinosum cytochrome C1 precursor PetC SW:CY1_CHRVI (O31216) (244 aa) fasta scores: E(): 2.7e-26, 41.637% id in 281 aa, and to Neisseria meningitidis ubiquinol--cytochrome C r [...] |
| petB protein network | https://string-db.org/network/257313.BP0276 | Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled [...] |
| petA protein network | https://string-db.org/network/257313.BP0277 | Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generat [...] |
| mscL protein network | https://string-db.org/network/257313.BP0278 | Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within th [...] |
| BP0279 protein network | https://string-db.org/network/257313.BP0279 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4445 TR:Q9HVX2 (EMBL:AE004859) (252 aa) fasta scores: E(): 8.6e-49, 53.516% id in 256 aa, and to Neisseria meningitidis hypothetical prote [...] |
| degQ protein network | https://string-db.org/network/257313.BP0280 | Protease; Similar to Escherichia coli protease DegQ precursor or HhoA or B3234 SW:DEGQ_ECOLI (P39099) (455 aa) fasta scores: E(): 1.6e-38, 41.642% id in 341 aa, and to Pseudomonas aeruginosa AlgW [...] |
| BP0281 protein network | https://string-db.org/network/257313.BP0281 | Transposase for IS481 element. |
| BP0282 protein network | https://string-db.org/network/257313.BP0282 | Putative regulatory protein; Similar to Bacillus subtilis protease synthase and sporulation negative regulatory protein Pai2 PaiB SW:PAIB_BACSU (P21341) (207 aa) fasta scores: E(): 3.2e-17, 30.47 [...] |
| BP0283 protein network | https://string-db.org/network/257313.BP0283 | Similar to Escherichia coli putative 2-hydroxyacid dehydrogenase in phoH-csgG intergenic region YcdW or B1033 SW:YCDW_ECOLI (P75913) (325 aa) fasta scores: E(): 2.7e-30, 36.364% id in 297 aa, and [...] |
| BP0284 protein network | https://string-db.org/network/257313.BP0284 | Similar to Rhizobium meliloti probable extracellular solute-binding protein, family 5 Sma2075 TR:AAK65791 (EMBL:AE007299) (543 aa) fasta scores: E(): 2e-63, 36.364% id in 539 aa, and to Rhizobium [...] |
| BP0285 protein network | https://string-db.org/network/257313.BP0285 | Similar to Escherichia coli acetyl esterase Aes or B0476 SW:AES_ECOLI (P23872) (319 aa) fasta scores: E(): 2.7e-29, 35.032% id in 314 aa, and to Streptomyces coelicolor putative lipase Sc4b10.32 [...] |
| BP0286 protein network | https://string-db.org/network/257313.BP0286 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0791 TR:Q9I5E7 (EMBL:AE004514) (262 aa) fasta scores: E(): 1.2e-37, 44.898% id in 245 aa, and to Rhizobium loti probable tra [...] |
| leuA-2 protein network | https://string-db.org/network/257313.BP0287 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...] |
| BP0288 protein network | https://string-db.org/network/257313.BP0288 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1235 TR:Q9I4A3 (EMBL:AE004553) (260 aa) fasta scores: E(): 1.1e-46, 52.697% id in 241 aa, and to Rhizobium loti probable tra [...] |
| ilvD protein network | https://string-db.org/network/257313.BP0289 | Similar to Escherichia coli dihydroxy-acid dehydratase IlvD or B3771 SW:ILVD_ECOLI (P05791) (616 aa) fasta scores: E(): 9.7e-180, 75.041% id in 617 aa, and to Neisseria meningitidis dihydroxy-aci [...] |
| BP0290 protein network | https://string-db.org/network/257313.BP0290 | Probable transporter; Similar to Rhizobium loti transmembrane efflux protein Mlr4084 TR:Q98EU2 (EMBL:AP003003) (397 aa) fasta scores: E(): 8.6e-82, 64.987% id in 397 aa, and to Streptomyces coeli [...] |
| BP0291 protein network | https://string-db.org/network/257313.BP0291 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1859 TR:Q9I2N6 (EMBL:AE004612) (295 aa) fasta scores: E(): 7e-66, 59.386% id in 293 aa, and to Neisseria meningitidis putati [...] |
| BP0294 protein network | https://string-db.org/network/257313.BP0294 | Conserved hypothetical protein (Pseudogene); Dephosphorylates the 5' and 2'(3')-phosphates of deoxyribonucleotides; Belongs to the 5'(3')-deoxyribonucleotidase family. |
| BP0295 protein network | https://string-db.org/network/257313.BP0295 | Transposase for IS481 element. |
| BP0296 protein network | https://string-db.org/network/257313.BP0296 | Hypothetical protein; No significant database matches. |
| BP0297 protein network | https://string-db.org/network/257313.BP0297 | Transposase for IS481 element. |
| BP0298 protein network | https://string-db.org/network/257313.BP0298 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2789 TR:Q9I054 (EMBL:AE004706) (359 aa) fasta scores: E(): 6.5e-06, 33.134% id in 335 aa, and to Agrobacterium tumefaciens Agr_l_258p TR:A [...] |
| BP0299 protein network | https://string-db.org/network/257313.BP0299 | MarR-family transcriptional regulator; Similar to Rhodopseudomonas palustris transcriptional activatory protein BadR SW:BADR_RHOPA (O07458) (175 aa) fasta scores: E(): 7.3e-06, 28.873% id in 142 [...] |
| BP0300 protein network | https://string-db.org/network/257313.BP0300 | Putative esterase; Similar to Pseudomonas paucimobilis esterase TR:Q9APE2 (EMBL:AF305841) (284 aa) fasta scores: E(): 4.4e-12, 28.058% id in 278 aa, and to Pseudomonas spCA10. hypothetical 31.6 k [...] |
| BP0301 protein network | https://string-db.org/network/257313.BP0301 | Similar to Rhodopseudomonas palustris putative ABC transporter substrate binding protein HbaE TR:O07470 (EMBL:U75364) (392 aa) fasta scores: E(): 4.5e-32, 32.741% id in 394 aa, and to Pseudomonas [...] |
| BP0302 protein network | https://string-db.org/network/257313.BP0302 | Probable branched-chain amino acid transport system, permease component; Similar to Rhodopseudomonas palustris putative ABC transporter subunit HbaF TR:O07469 (EMBL:U75364) (286 aa) fasta scores: [...] |
| BP0303 protein network | https://string-db.org/network/257313.BP0303 | Probable branched-chain amino acid transport system, permease component; Similar to Rhizobium meliloti putative permease ABC transporter protein Smc03117 TR:CAC47555 (EMBL:AL591792) (330 aa) fast [...] |
| BP0304 protein network | https://string-db.org/network/257313.BP0304 | Similar to Streptomyces coelicolor putative branched-chain amino acid transport ATP-binding protein Scf42.19C TR:Q9L2J9 (EMBL:AL137165) (266 aa) fasta scores: E(): 9.1e-30, 43.243% id in 259 aa, [...] |
| BP0305 protein network | https://string-db.org/network/257313.BP0305 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 7.5e-27, 44.915% id in 236 aa, a [...] |
| BP0309 protein network | https://string-db.org/network/257313.BP0309 | Probable short chain dehydrogenase (Pseudogene); HMMPfam hit to PF00678; Belongs to the enoyl-CoA hydratase/isomerase family. |
| BP0310 protein network | https://string-db.org/network/257313.BP0310 | Similar to Azoarcus evansii putative acyl-CoA dehydrogenase TR:AAL02066 (EMBL:AF320253) (404 aa) fasta scores: E(): 2.7e-99, 71.318% id in 387 aa, and to Thauera aromatica putative acyl-CoA dehyd [...] |
| BP0311 protein network | https://string-db.org/network/257313.BP0311 | Probable acid-coenzyme A ligase; Similar to Rhodopseudomonas palustris benzoate-coenzyme A ligase BadA TR:Q59760 (EMBL:L42322) (521 aa) fasta scores: E(): 1.1e-49, 34.990% id in 523 aa, and to Az [...] |
| BP0312 protein network | https://string-db.org/network/257313.BP0312 | Similar to Pseudomonas SpdJ-12. 4-hydroxybenzoyl-CoA thioesterase FcbC TR:Q9RBQ8 (EMBL:AF051771) (142 aa) fasta scores: E(): 7.8e-07, 33.333% id in 132 aa, and to Bacillus halodurans 4-hydroxyben [...] |
| BP0313 protein network | https://string-db.org/network/257313.BP0313 | Similar to Azoarcus evansii hypothetical 14.6 kDa protein TR:AAL02075 (EMBL:AF320254) (132 aa) fasta scores: E(): 3e-28, 55.303% id in 132 aa, and to Rhizobium loti Mll5429 protein TR:Q98BU0 (EMB [...] |
| BP0314 protein network | https://string-db.org/network/257313.BP0314 | Similar to Vibrio cholerae hypothetical protein Vca1085 TR:Q9KKL8 (EMBL:AE004434) (556 aa) fasta scores: E(): 3.5e-23, 27.632% id in 456 aa, and to Thermotoga maritima conserved hypothetical prot [...] |
| hemL protein network | https://string-db.org/network/257313.BP0315 | Similar to Escherichia coli glutamate-1-semialdehyde 2,1-aminomutase HemL or Gsa or PopC or B0154 SW:GSA_ECOLI (P23893) (426 aa) fasta scores: E(): 6.9e-94, 60.094% id in 426 aa, and to Neisseria [...] |
| thiE protein network | https://string-db.org/network/257313.BP0316 | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...] |
| thiD protein network | https://string-db.org/network/257313.BP0317 | Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD or B2103 SW:THID_ECOLI (P76422) (266 aa) fasta scores: E(): 0.0004, 24.255% id in 235 aa, and to Pseudomonas aeruginosa phosphometh [...] |
| rubA protein network | https://string-db.org/network/257313.BP0318 | Rubredoxin; Similar to Acinetobacter calcoaceticus rubredoxin RubA SW:RUBR_ACICA (P42453) (54 aa) fasta scores: E(): 1.2e-15, 55.556% id in 54 aa, and to Pseudomonas aeruginosa rubredoxin Pa5350 [...] |
| BP0319 protein network | https://string-db.org/network/257313.BP0319 | Putative transcriptional regulator; Similar to Pseudomonas aeruginosa AlgH or Pa0405 TR:Q9RQ16 (EMBL:AF137022) (189 aa) fasta scores: E(): 2.9e-31, 49.730% id in 185 aa, and to Neisseria meningit [...] |
| BP0320 protein network | https://string-db.org/network/257313.BP0320 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. |
| pyrB protein network | https://string-db.org/network/257313.BP0321 | Similar to Pseudomonas putida aspartate carbamoyltransferase PyrB SW:PYRB_PSEPU (Q59711) (334 aa) fasta scores: E(): 6.5e-77, 64.821% id in 307 aa, and to Pseudomonas aeruginosa aspartate carbamo [...] |
| pyrC protein network | https://string-db.org/network/257313.BP0322 | Dihydroorotase; Similar to Pseudomonas aeruginosa dihydroorotase-like protein PyrC' or PyrX or Pa0401 SW:PYRX_PSEAE (Q51551) (423 aa) fasta scores: E(): 5.5e-50, 44.041% id in 386 aa, and to Pseu [...] |
| BP0323 protein network | https://string-db.org/network/257313.BP0323 | Acyltransferase; Similar to Neisseria gonorrhoeae 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC SW:PLSC_NEIGO (Q59601) (255 aa) fasta scores: E(): 5.3e-21, 33.862% id in 189 aa, and to Burk [...] |
| apaH protein network | https://string-db.org/network/257313.BP0324 | Diadenosine-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. |
| BP0325 protein network | https://string-db.org/network/257313.BP0325 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3827 TR:Q9HXH5 (EMBL:AE004800) (355 aa) fasta scores: E(): 3e-11, 28.212% id in 358 aa, and to Vibrio cholerae [...] |
| mtgA protein network | https://string-db.org/network/257313.BP0326 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 fam [...] |
| BP0327 protein network | https://string-db.org/network/257313.BP0327 | Transposase for IS481 element. |
| BP0328 protein network | https://string-db.org/network/257313.BP0328 | Conserved hypothetical protein; Similar to Bacillus halodurans Bh0200 protein TR:Q9KGB0 (EMBL:AP001507) (107 aa) fasta scores: E(): 3.3, 30.108% id in 93 aa, and to the N-terminal region of Vibri [...] |
| BP0329 protein network | https://string-db.org/network/257313.BP0329 | Similar to Pseudomonas diterpeniphila coenzyme A ligase TdtL TR:AAK95584 (EMBL:AF274704) (543 aa) fasta scores: E(): 3.2e-55, 36.813% id in 546 aa, and to Streptomyces griseus subspgriseus NonL T [...] |
| BP0330 protein network | https://string-db.org/network/257313.BP0330 | Conserved hypothetical protein; Similar to Pseudomonas chlororaphis hypothetical 35.8 kDa protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 4e-24, 30.380% id in 316 aa, and to Rhizobi [...] |
| BP0331 protein network | https://string-db.org/network/257313.BP0331 | Similar to Methanococcus jannaschii hypothetical protein Mj1552 TR:Q58947 (EMBL:U67596) (141 aa) fasta scores: E(): 4.3e-07, 36.842% id in 95 aa, and to Archaeoglobus fulgidus conserved hypotheti [...] |
| BP0332 protein network | https://string-db.org/network/257313.BP0332 | Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 3.6e-43, 40.874% id in 389 aa, and to Rhodococcus spNCIMB 9784 non-specific lip [...] |
| BP0333 protein network | https://string-db.org/network/257313.BP0333 | Metallo-beta-lactamase family protein; Similar to Alteromonas carrageenovora arylsulfatase precursor AtsA or Ats SW:ARS_ALTCA (P28607) (328 aa) fasta scores: E(): 8.2e-09, 27.541% id in 305 aa, a [...] |
| BP0334 protein network | https://string-db.org/network/257313.BP0334 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-37, 41.176% id in 323 aa, and to Pseudomonas putida hypothetic [...] |
| BP0337 protein network | https://string-db.org/network/257313.BP0337 | Putative exported protein (pseudogene); Pseudogen. The N-terminal region of this CDS is deleted relative to its orthologues in B. pertussis and B. bronchiseptica. Similar to the C-reminal regions [...] |
| BP0338 protein network | https://string-db.org/network/257313.BP0338 | Putative membrane protein; No significant database matches. |
| ogt protein network | https://string-db.org/network/257313.BP0339 | Similar to Escherichia coli methylated-DNA--protein-cysteine methyltransferase Ogt or B1335 SW:OGT_ECOLI (P09168) (171 aa) fasta scores: E(): 1e-25, 42.857% id in 168 aa, and to Caulobacter cresc [...] |
| alkB protein network | https://string-db.org/network/257313.BP0340 | Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD or B2212 SW:ALKB_ECOLI (P05050) (216 aa) fasta scores: E(): 9.4e-44, 56.808% id in 213 aa, and to Brucella melitensis AlkB TR [...] |
| BP0341 protein network | https://string-db.org/network/257313.BP0341 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr1862 protein TR:Q98JN4 (EMBL:AP002998) (247 aa) fasta scores: E(): 2.1e-59, 61.039% id in 231 aa, and to Caulobacter crescentus hypoth [...] |
| BP0342 protein network | https://string-db.org/network/257313.BP0342 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0312 TR:Q9I6H9 (EMBL:AE004469) (164 aa) fasta scores: E(): 5.4e-27, 58.182% id in 165 aa, and to Rhizobium loti Mll0105 protein TR:Q98NK1 [...] |
| bhuV protein network | https://string-db.org/network/257313.BP0343 | Putative ATP-binding component of hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. |
| bhuU protein network | https://string-db.org/network/257313.BP0344 | Putative hemin permease; Similar to Yersinia enterocolitica hemin permease HemU TR:P74980 (EMBL:X77867) (334 aa) fasta scores: E(): 4.8e-47, 50.000% id in 286 aa, and to Yersinia pestis hemin tra [...] |
| bhuT protein network | https://string-db.org/network/257313.BP0345 | Similar to Yersinia enterocolitica hemin binding protein HemT TR:P74979 (EMBL:X77867) (279 aa) fasta scores: E(): 8.2e-29, 37.638% id in 271 aa, and to Yersinia pestis hemin-binding periplasmic p [...] |
| bhuS protein network | https://string-db.org/network/257313.BP0346 | Similar to Yersinia pestis hemin transport protein HmuS SW:HMUS_YERPE (Q56990) (345 aa) fasta scores: E(): 1.1e-46, 42.486% id in 346 aa, and to Yersinia enterocolitica hemin transport protein He [...] |
| bhuR protein network | https://string-db.org/network/257313.BP0347 | Outer membrane heme receptor; Previously sequenced as Bordetella pertussis outer membrane heme receptor BhuR TR:AAK38153 (EMBL:AY032627) (149 aa) fasta scores: E(): 2.7e-49, 100.000% id in 149 aa [...] |
| hurR protein network | https://string-db.org/network/257313.BP0348 | Heme uptake transmembrane sensor; Similar to Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 1e-22, 32.459% id in 305 aa, and to Pseudomonas aeruginosa p [...] |
| hurI protein network | https://string-db.org/network/257313.BP0349 | Heme uptake regulator; Similar to Escherichia coli probable RNA polymerase sigma factor FecI or B4293 SW:FECI_ECOLI (P23484) (173 aa) fasta scores: E(): 1.2e-26, 50.649% id in 154 aa, and to Pseu [...] |
| BP0350 protein network | https://string-db.org/network/257313.BP0350 | Hypothetical protein; No significant database matches. |
| BP0351 protein network | https://string-db.org/network/257313.BP0351 | Similar to Synechocystis sp ferredoxin PetF or Sll1382 TR:P74159 (EMBL:D90912) (122 aa) fasta scores: E(): 0.074, 28.125% id in 96 aa, and to Anabaena variabilis putative TR:AAL05047 (EMBL:AF4104 [...] |
| BP0352 protein network | https://string-db.org/network/257313.BP0352 | Hypothetical protein; No significant database matches. |
| BP0353 protein network | https://string-db.org/network/257313.BP0353 | Similar to Ralstonia spKN1 ferredoxin-like protein PhyF TR:Q9RAF3 (EMBL:AB031996) (115 aa) fasta scores: E(): 0.00015, 36.957% id in 92 aa, and to Pseudomonas putida ferredoxin, plant-type NahT S [...] |
| BP0354 protein network | https://string-db.org/network/257313.BP0354 | Similar to Halobacterium sp ornithine cyclodeaminase Ocd2 or Vng1364G TR:Q9HQ24 (EMBL:AE005056) (328 aa) fasta scores: E(): 3.7e-18, 31.494% id in 308 aa, and to Rhizobium loti ornithine cyclodea [...] |
| BP0355 protein network | https://string-db.org/network/257313.BP0355 | Transposase for IS481 element. |
| BP0356 protein network | https://string-db.org/network/257313.BP0356 | GntR-family transcription regulator; Similar to Rhizobium leguminosarum transcription activator MatR TR:Q9JP74 (EMBL:AF117694) (222 aa) fasta scores: E(): 9.1e-15, 37.824% id in 193 aa, and to St [...] |
| BP0357 protein network | https://string-db.org/network/257313.BP0357 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical protein Sma1368 TR:AAK65408 (EMBL:AE007262) (241 aa) fasta scores: E(): 1e-21, 36.325% id in 234 aa, and to Vibrio cholerae h [...] |
| BP0358 protein network | https://string-db.org/network/257313.BP0358 | Putative membrane protein; Similar to Bacillus halodurans Bh2161 protein TR:Q9KAX5 (EMBL:AP001514) (477 aa) fasta scores: E(): 2.9e-34, 46.573% id in 496 aa, and to Bacillus subtilis hypothetical [...] |
| BP0359 protein network | https://string-db.org/network/257313.BP0359 | Conserved hypothetical protein; Similar to Chlamydia muridarum putative coenzyme pqq synthesis protein C Tc0900 TR:Q9PJC9 (EMBL:AE002356) (236 aa) fasta scores: E(): 2.5e-11, 28.729% id in 181 aa [...] |
| BP0360 protein network | https://string-db.org/network/257313.BP0360 | Similar to Bacillus stearothermophilus aldehyde dehydrogenase, thermostable AldhT SW:DHAL_BACST (P42329) (488 aa) fasta scores: E(): 1.1e-77, 46.008% id in 476 aa, and to Bacillus subtilis probab [...] |
| BP0361 protein network | https://string-db.org/network/257313.BP0361 | Conserved hypothetical protein; Similar to Citrobacter freundii hypothetical 15.0 kDa protein in dhaT-dhaS intergenic region SW:YDHY_CITFR (P45517) (142 aa) fasta scores: E(): 4.1e-11, 33.803% id [...] |
| BP0362 protein network | https://string-db.org/network/257313.BP0362 | Similar to Yersinia pseudotuberculosis CDP-6-deoxy-delta-3,4-glucoseen reductase AscD or RfbI SW:ASCD_YERPS (P37911) (328 aa) fasta scores: E(): 1.2e-35, 33.846% id in 325 aa, and to Yersinia pes [...] |
| BP0363 protein network | https://string-db.org/network/257313.BP0363 | Similar to Rhizobium loti probable binding protein component of amino acid ABC transporter Mlr2201 TR:Q98IX6 (EMBL:AP002999) (262 aa) fasta scores: E(): 0.0001, 29.104% id in 134 aa, and to Synec [...] |
| BP0364 protein network | https://string-db.org/network/257313.BP0364 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Smb20179 TR:CAC48579 (EMBL:AL603642) (324 aa) fasta scores: E(): 1.3e-14, 24.615% id in 325 aa, and to Rhiz [...] |
| BP0367 protein network | https://string-db.org/network/257313.BP0367 | HMMPfam hit to PF00582, Universal stress protein family. |
| gdhA protein network | https://string-db.org/network/257313.BP0368 | Similar to Escherichia coli NADP-specific glutamate dehydrogenase GdhA or B1761 SW:DHE4_ECOLI (P00370) (447 aa) fasta scores: E(): 3.7e-126, 72.398% id in 442 aa, and to Pasteurella multocida Gdh [...] |
| BP0369 protein network | https://string-db.org/network/257313.BP0369 | Similar to Neisseria meningitidis putative nuclease Nma0348 or Nmb2082 TR:Q9JR99 (EMBL:AL162752) (259 aa) fasta scores: E(): 5e-63, 56.705% id in 261 aa, and to Streptomyces coelicolor putative e [...] |
| pyrE protein network | https://string-db.org/network/257313.BP0370 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). |
| gatB protein network | https://string-db.org/network/257313.BP0371 | glutamyl-tRNA(GLN) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in [...] |
| gatA protein network | https://string-db.org/network/257313.BP0372 | glutamyl-tRNA(GLN) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-t [...] |
| gatC protein network | https://string-db.org/network/257313.BP0373 | glutamyl-tRNA(GLN) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in [...] |
| mreB protein network | https://string-db.org/network/257313.BP0374 | Similar to Escherichia coli rod shape-determining protein MreB or EnvB or RodY or B3251 SW:MREB_ECOLI (P13519) (347 aa) fasta scores: E(): 2.6e-88, 72.595% id in 343 aa, and to Vibrio cholerae Mr [...] |
| mreC protein network | https://string-db.org/network/257313.BP0375 | Rod shape-determining protein; Involved in formation and maintenance of cell shape. |
| mreD protein network | https://string-db.org/network/257313.BP0376 | Similar to Escherichia coli rod shape-determining protein MreD or B3249 or Z4607 or Ecs4121 SW:MRED_ECOLI (P16927) (162 aa) fasta scores: E(): 1.5e-06, 33.333% id in 117 aa, and to Pseudomonas ae [...] |
| mrdA protein network | https://string-db.org/network/257313.BP0377 | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. |
| mrdB protein network | https://string-db.org/network/257313.BP0378 | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. |
| ldh protein network | https://string-db.org/network/257313.BP0379 | Similar to Alcaligenes eutrophus L-lactate dehydrogenase Ldh SW:LDH_ALCEU (Q07251) (349 aa) fasta scores: E(): 1.4e-89, 66.097% id in 351 aa, and to Escherichia coli hypothetical 38.9 kDa protein [...] |
| BP0380 protein network | https://string-db.org/network/257313.BP0380 | Putative Sodium:sulfate symportert; Similar to Escherichia coli putative tartrate carrier YgjE or B3063 SW:TTDT_ECOLI (P39414) (487 aa) fasta scores: E(): 1.6e-25, 26.141% id in 482 aa, and to Al [...] |
| SlmA protein network | https://string-db.org/network/257313.BP0381 | Putative TetR-family transcriptional regulator; Similar to Escherichia coli Ttk protein or B3641 SW:TTK_ECOLI (P06969) (198 aa) fasta scores: E(): 1.6e-19, 44.693% id in 179 aa, and to Vibrio cho [...] |
| BP0382 protein network | https://string-db.org/network/257313.BP0382 | Putative hydrolase; Similar to Neisseria meningitidis hydrolase, putative Nmb0040 TR:Q9K1P1 (EMBL:AE002362) (237 aa) fasta scores: E(): 1e-20, 37.674% id in 215 aa, and to Rhizobium meliloti cons [...] |
| argB protein network | https://string-db.org/network/257313.BP0383 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. |
| BP0385 protein network | https://string-db.org/network/257313.BP0385 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3931 TR:Q9HX85 (EMBL:AE004811) (259 aa) fasta scores: E(): 3.5e-62, 68.775% id in 253 aa, and to Xylella fastid [...] |
| BP0386 protein network | https://string-db.org/network/257313.BP0386 | Putative thioredoxin; Similar to Treponema pallidum thioredoxin TptrX TR:Q9R788 (EMBL:U95250) (185 aa) fasta scores: E(): 1.5e-08, 32.143% id in 140 aa, and to Neisseria meningitidis thioredoxin, [...] |
| BP0387 protein network | https://string-db.org/network/257313.BP0387 | Putative exported protein; Similar to Haemophilus influenzae hypothetical protein Hi1658 precursor SW:YRAP_HAEIN (P45301) (193 aa) fasta scores: E(): 8.2e-20, 39.037% id in 187 aa, and to Pasteur [...] |
| gmhA protein network | https://string-db.org/network/257313.BP0388 | Probable phosphosugar isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. |
| rsmI protein network | https://string-db.org/network/257313.BP0390 | Conserved hypothetical protein (Pseudogene); Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. |
| ogt-2 protein network | https://string-db.org/network/257313.BP0391 | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the [...] |
| BP0394 protein network | https://string-db.org/network/257313.BP0394 | HMMPfam hit to PF00892, Integral membrane protein DUF6. |
| BP0395 protein network | https://string-db.org/network/257313.BP0395 | Putative exported protein; Similar to Mycobacterium tuberculosis hypothetical 29.7 kDa protein Rv2307c or Mt2364 or Mtcy339.02 SW:YN07_MYCTU (Q50658) (281 aa) fasta scores: E(): 7.3e-16, 32.491% [...] |
| BP0396 protein network | https://string-db.org/network/257313.BP0396 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical protein Sma1780 TR:AAK65640 (EMBL:AE007284) (147 aa) fasta scores: E(): 5.4e-17, 39.855% id in 138 aa, and to Pseudomonas aer [...] |
| BP0397 protein network | https://string-db.org/network/257313.BP0397 | Similar to Escherichia coli hypothetical 27.8 kDa protein in celF-katE intergenic region YdjC or B1733 SW:YDJC_ECOLI (P37794) (249 aa) fasta scores: E(): 0.00011, 25.993% id in 277 aa, and to Rhi [...] |
| BP0398 protein network | https://string-db.org/network/257313.BP0398 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3556 TR:Q9HY61 (EMBL:AE004776) (549 aa) fasta scores: E(): 4.1e-31, 30.059% id in 509 aa, and to Salmonella typ [...] |
| BP0399 protein network | https://string-db.org/network/257313.BP0399 | Putative glycosyl transferase; Similar to Shigella flexneri GtrbI TR:Q9RPZ6 (EMBL:AF139596) (306 aa) fasta scores: E(): 1.2e-41, 40.000% id in 305 aa, and to Synechocystis sp putative glycosyl tr [...] |
| gltS protein network | https://string-db.org/network/257313.BP0402 | Transposase (Pseudogene); Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. |
| BP0403 protein network | https://string-db.org/network/257313.BP0403 | Putative exported protein; No significant database matches. |
| atoE protein network | https://string-db.org/network/257313.BP0404 | Similar to Escherichia coli short-chain fatty acids transporter AtoE or B2223 SW:ATOE_ECOLI (P76460) (440 aa) fasta scores: E(): 2.5e-76, 47.018% id in 436 aa, and to Bacillus halodurans short-ch [...] |
| BP0405 protein network | https://string-db.org/network/257313.BP0405 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa2501 TR:Q9I0Y1 (EMBL:AE004677) (55 aa) fasta scores: E(): 0.93, 40.476% id in 42 aa. |
| dnaQ protein network | https://string-db.org/network/257313.BP0406 | DNA polymerase III, epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing functi [...] |
| fusA protein network | https://string-db.org/network/257313.BP0410 | N-terminal region of elongation factor G (Pseudogene); ScanRegExp hit to PS00301, GTP-binding elongation factors signature. Confirmed by InterPro eMOTIF pattern match. |
| BP0411 protein network | https://string-db.org/network/257313.BP0411 | Similar to Caulobacter crescentus hypothetical protein Cc0924 TR:Q9A9Q0 (EMBL:AE005769) (135 aa) fasta scores: E(): 1.6e-09, 42.991% id in 107 aa, and to Rhizobium loti Mll8311 protein TR:Q983I8 [...] |
| BP0412 protein network | https://string-db.org/network/257313.BP0412 | Similar to Rhizobium meliloti putative transcriptional regulator protein Smb20039 TR:CAC48442 (EMBL:AL603642) (474 aa) fasta scores: E(): 3.8e-58, 40.517% id in 464 aa, and to Pseudomonas aerugin [...] |
| fusA-2 protein network | https://string-db.org/network/257313.BP0414 | C-terminal region of elongation factor G (Pseudogene); HMMPfam hit to PF00679, Elongation factor G C-terminus. |
| BP0415 protein network | https://string-db.org/network/257313.BP0415 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc03171 TR:CAC47481 (EMBL:AL591792) (250 aa) fasta scores: E(): 2.2e-67, 75.410% id in 244 aa, and to [...] |
| BP0416 protein network | https://string-db.org/network/257313.BP0416 | Conserved hypothetical protein; Similar to Rhodococcus spAD45 putative racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 6.1e-48, 37.940% id in 398 aa, and to Streptomyces coeli [...] |
| BP0417 protein network | https://string-db.org/network/257313.BP0417 | Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 1.7e-20, 34.221% id in 263 aa, and to Pseudomonas putida PhaB TR:O84979 ( [...] |
| BP0418 protein network | https://string-db.org/network/257313.BP0418 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.8e-32, 36.218% id in 312 aa, and to Pseudomonas putida hypothetic [...] |
| BP0419 protein network | https://string-db.org/network/257313.BP0419 | LysR-family transcriptional regulator; Similar to Bacillus subtilis als operon regulatory protein AlsR SW:ALSR_BACSU (Q04778) (302 aa) fasta scores: E(): 1.9e-26, 30.592% id in 304 aa, and to Pse [...] |
| BP0420 protein network | https://string-db.org/network/257313.BP0420 | Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1022 TR:Q9I4V2 (EMBL:AE004534) (381 aa) fasta scores: E(): 2.4e-29, 33.159% id in 383 aa, and to Mycobacterium tuberculosis CDC [...] |
| BP0421 protein network | https://string-db.org/network/257313.BP0421 | Putative acyl-CoA dehydrogenase; Similar to Mycobacterium tuberculosis CDC1551 acyl-CoA dehydrogenase, putative Mt3669 TR:AAK48027 (EMBL:AE007168) (318 aa) fasta scores: E(): 1.4e-09, 30.132% id [...] |
| BP0422 protein network | https://string-db.org/network/257313.BP0422 | Probable thiolase; Similar to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SW:THIL_ALCEU (P14611) (393 aa) fasta scores: E(): 1.5e-60, 46.530% id in 389 aa, and to Rhizobium meliloti p [...] |
| BP0424 protein network | https://string-db.org/network/257313.BP0424 | Putative fatty acid CoA ligase (Pseudogene); GGCC in pertussis; GGatCC in parapertussis. |
| BP0425 protein network | https://string-db.org/network/257313.BP0425 | Probable LysR-family transcriptional regulator; Similar to Alcaligenes eutrophus putative regulator of catechol degradation CatR TR:Q9EV43 (EMBL:AF042281) (330 aa) fasta scores: E(): 2.1e-15, 28. [...] |
| cspA protein network | https://string-db.org/network/257313.BP0426 | Cold shock protein; Similar to Escherichia coli cold shock protein CspA or B3556 SW:CSPA_ECOLI (P15277) (69 aa) fasta scores: E(): 9.5e-12, 55.385% id in 65 aa, and to Bordetella pertussis cold s [...] |
| BP0428 protein network | https://string-db.org/network/257313.BP0428 | Similar to Rhizobium meliloti putative transcriptional regulator, GntR family protein Smb20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 7e-10, 32.203% id in 177 aa, and to Streptom [...] |
| BP0429 protein network | https://string-db.org/network/257313.BP0429 | Similar to Homo sapiens delta-1-pyrroline-5-carboxylate dehydrogenase precursor AldH4a1 or P5cdh or AldH4 SW:PUT2_HUMAN (P30038) (563 aa) fasta scores: E(): 7.8e-101, 50.094% id in 531 aa, and to [...] |
| BP0430 protein network | https://string-db.org/network/257313.BP0430 | Short-chain fatty acids transporter; Similar to Pseudomonas aeruginosa hypothetical protein Pa2002 TR:Q9I2A7 (EMBL:AE004626) (474 aa) fasta scores: E(): 7.3e-97, 53.564% id in 463 aa, and to Haem [...] |
| BP0431 protein network | https://string-db.org/network/257313.BP0431 | Putative molybdopterin oxidoreductase; Similar to Salmonella typhimurium thiosulfate reductase precursor PhsA SW:PHSA_SALTY (P37600) (758 aa) fasta scores: E(): 6.8e-17, 23.279% id in 799 aa, and [...] |
| BP0432 protein network | https://string-db.org/network/257313.BP0432 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4173 TR:Q9HWK8 (EMBL:AE004833) (132 aa) fasta scores: E(): 1.7e-40, 75.194% id in 129 aa, and to Escherichia coli O157:H7 EDL933 Orf, hypo [...] |
| BP0433 protein network | https://string-db.org/network/257313.BP0433 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4174 TR:Q9HWK7 (EMBL:AE004834) (307 aa) fasta scores: E(): 3.7e-80, 70.588% id in 306 aa, and to Rhizobium meliloti putative [...] |
| BP0435 protein network | https://string-db.org/network/257313.BP0435 | Putative exported protein (Pseudogene); Signal peptide predicted for BP0454 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 between residues 21 and 22; B [...] |
| BP0436 protein network | https://string-db.org/network/257313.BP0436 | Conserved hypothetical protein; Similar to Salmonella enteritidis FkbR2 =TR:AAK97549 (EMBL:AF376036) (175 aa) fasta scores: E(): 1.7e-27, 55.634% id in 142 aa, and to Streptomyces hygroscopicus v [...] |
| BP0437 protein network | https://string-db.org/network/257313.BP0437 | LysR-family transcriptional regulator; Similar to Escherichia coli cyn operon transcriptional activator CynR or B0338 SW:CYNR_ECOLI (P27111) (311 aa) fasta scores: E(): 2.3e-21, 31.119% id in 286 [...] |
| BP0438 protein network | https://string-db.org/network/257313.BP0438 | Similar to Caulobacter crescentus hypothetical protein Cc3562 TR:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 1.5e-66, 42.750% id in 400 aa, and to Pseudomonas aeruginosa hypothetical prote [...] |
| BP0439 protein network | https://string-db.org/network/257313.BP0439 | Transposase for IS481 element. |
| BP0441 protein network | https://string-db.org/network/257313.BP0441 | N-terminal region of isovaleryl-CoA dehydrogenase (Pseudogene); HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, C-terminal domain. |
| BP0442 protein network | https://string-db.org/network/257313.BP0442 | Similar to Caulobacter crescentus metallo-beta-lactamase family protein Cc0395 TR:Q9AB39 (EMBL:AE005712) (317 aa) fasta scores: E(): 2.2e-44, 39.812% id in 319 aa, and to Deinococcus radiodurans [...] |
| aceK protein network | https://string-db.org/network/257313.BP0447 | Isocitrate dehydrogenase kinase/phosphatase (Pseudogene); In-frame TAG stop codon in pertussis; GAC in parapertussis and bronchiseptica; Belongs to the thiolase-like superfamily. Thiolase family. |
| accB protein network | https://string-db.org/network/257313.BP0448 | Similar to Myxococcus xanthus acetyl-CoA carboxylase carboxyltransferase AccB TR:Q9FAF6 (EMBL:AB039884) (538 aa) fasta scores: E(): 1.7e-93, 47.330% id in 543 aa, and to Homo sapiens 3-methylcrot [...] |
| accA protein network | https://string-db.org/network/257313.BP0449 | Similar to Myxococcus xanthus acetyl-Coa Carboxylase biotin carboxylase subunit AccA TR:Q9FAF5 (EMBL:AB039884) (573 aa) fasta scores: E(): 8.6e-85, 46.667% id in 570 aa, and to Escherichia coli b [...] |
| BP0450 protein network | https://string-db.org/network/257313.BP0450 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3012 TR:Q9HZJ4 (EMBL:AE004726) (124 aa) fasta scores: E(): 9.3e-07, 42.667% id in 75 aa, and to Clostridium acetobutylicum hypothetical pr [...] |
| argM protein network | https://string-db.org/network/257313.BP0451 | Similar to Escherichia coli succinylornithine transaminase ArgM or AstC or CstC or B1748 SW:ARGM_ECOLI (P77581) (406 aa) fasta scores: E(): 1.9e-57, 44.503% id in 382 aa, and to Pseudomonas aerug [...] |
| BP0452 protein network | https://string-db.org/network/257313.BP0452 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-42, 41.956% id in 317 aa, and to Agrob [...] |
| BP0453 protein network | https://string-db.org/network/257313.BP0453 | Low-specificity D-threonine aldolase; Similar to Arthrobacter sp metal-activated pyridoxal enzyme TR:O82872 (EMBL:AB010956) (379 aa) fasta scores: E(): 8.3e-99, 71.698% id in 371 aa, and to Alcal [...] |
| BP0454 protein network | https://string-db.org/network/257313.BP0454 | Putative exported protein; Similar to Brucella abortus 31 kDa immunogenic protein precursor Bcsp31 SW:BCSP_BRUAB (P12920) (329 aa) fasta scores: E(): 1.8e-68, 61.329% id in 331 aa, and to Archaeo [...] |
| BP0455 protein network | https://string-db.org/network/257313.BP0455 | Putative membrane protein; Similar to Bacillus halodurans Bh2945 protein Bh2945 TR:Q9K8Q8 (EMBL:AP001517) (656 aa) fasta scores: E(): 1.6e-57, 41.705% id in 657 aa, and to Pasteurella multocida h [...] |
| hemC protein network | https://string-db.org/network/257313.BP0456 | Putative heme receptor; Similar to Haemophilus ducreyi TonB-dependent heme receptor A precursor TdhA TR:O87381 (EMBL:AF052977) (739 aa) fasta scores: E(): 1.4e-134, 48.743% id in 716 aa, and to H [...] |
| smg protein network | https://string-db.org/network/257313.BP0457 | Conserved hypothetical protein; Similar to Escherichia coli protein Smg or B3284 SW:SMG_ECOLI (P30853) (157 aa) fasta scores: E(): 3.5e-12, 40.506% id in 158 aa, and to Vibrio cholerae Smg protei [...] |
| BP0459 protein network | https://string-db.org/network/257313.BP0459 | Probable aminoacyl-tRNA synthetase (Pseudogene); HMMPfam hit to PF00749, tRNA synthetases class I (E and Q). |
| topB protein network | https://string-db.org/network/257313.BP0460 | DNA topoisomerase iii; Similar to Escherichia coli DNA topoisomerase III TopB or B1763 SW:TOP3_ECOLI (P14294) (653 aa) fasta scores: E(): 5.8e-37, 33.866% id in 626 aa, and to Haemophilus influen [...] |
| BP0461 protein network | https://string-db.org/network/257313.BP0461 | Putative exported protein; Similar to Rhizobium loti ABC transporter, substrate-binding protein Mlr7949 TR:Q984L7 (EMBL:AP003013) (337 aa) fasta scores: E(): 2.5e-08, 25.085% id in 295 aa, and to [...] |
| BP0462 protein network | https://string-db.org/network/257313.BP0462 | ABC-transporter, ATP-binding component; Similar to Streptomyces coelicolor putative ABC-transport protein, ATP-binding component Sc8g12.21 TR:Q9KYY4 (EMBL:AL355753) (270 aa) fasta scores: E(): 3. [...] |
| BP0463 protein network | https://string-db.org/network/257313.BP0463 | ABC transporter, permease component; Similar to Escherichia coli taurine transport system permease protein TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 7.1e-16, 28.195 [...] |
| idnO protein network | https://string-db.org/network/257313.BP0464 | Similar to Escherichia coli gluconate 5-dehydrogenase IdnO or B4266 SW:IDNO_ECOLI (P39345) (254 aa) fasta scores: E(): 1.8e-29, 40.000% id in 250 aa, and to Agrobacterium tumefaciens Agr_c_4386p [...] |
| BP0465 protein network | https://string-db.org/network/257313.BP0465 | Similar to Ustilago maydis indole-3-acetaldehyde dehydrogenase Iad1 TR:Q92460 (EMBL:U74468) (497 aa) fasta scores: E(): 1.2e-68, 42.827% id in 474 aa, and to Bacillus halodurans NADP-dependent al [...] |
| FabG protein network | https://string-db.org/network/257313.BP0466 | Alcohol dehydrogenase; Similar to Escherichia coli 7-alpha-hydroxysteroid dehydrogenase HdhA or HsdH or B1619 or Z2624 or Ecs2327 SW:HDHA_ECOLI (P25529) (255 aa) fasta scores: E(): 7.5e-24, 37.75 [...] |
| BP0467 protein network | https://string-db.org/network/257313.BP0467 | Similar to Saccharomyces cerevisiae acetolactate synthase, mitochondrial precursor Ilv2 or Smr1 or Ymr108w or Ym9718.07 SW:ILVB_YEAST (P07342) (687 aa) fasta scores: E(): 1.7e-87, 42.710% id in 5 [...] |
| BP0468 protein network | https://string-db.org/network/257313.BP0468 | Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SW:BKDR_PSEPU (P42179) (161 aa) fasta scores: E(): 1.3e-19, 39.073% id in 151 aa, and to Pseudomonas aeruginosa probable tr [...] |
| BP0469 protein network | https://string-db.org/network/257313.BP0469 | Putative membrane protein; Similar to Escherichia coli O157:H7 hypothetical 36.8 kDa protein Ecs2127 TR:BAB35550 (EMBL:AP002557) (321 aa) fasta scores: E(): 2.3e-34, 38.170% id in 317 aa, and to [...] |
| BP0470 protein network | https://string-db.org/network/257313.BP0470 | Similar to Xylella fastidiosa hypothetical protein Xf1478 TR:Q9PDA1 (EMBL:AE003977) (139 aa) fasta scores: E(): 4.3e-20, 48.227% id in 141 aa, and to Homo sapiens similar to kiaa0304 gene product [...] |
| ribB protein network | https://string-db.org/network/257313.BP0471 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. |
| BP0473 protein network | https://string-db.org/network/257313.BP0473 | Conserved hypothetical protein (Pseudogene); Inverted repeat for IS481 element. |
| BP0474 protein network | https://string-db.org/network/257313.BP0474 | Choloylglycine hydrolase; Similar to Clostridium perfringens choloylglycine hydrolase SW:CBH_CLOPE (P54965) (329 aa) fasta scores: E(): 1.7e-06, 25.959% id in 339 aa, and to Rhizobium loti Mlr814 [...] |
| rne protein network | https://string-db.org/network/257313.BP0475 | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation [...] |
| rluC protein network | https://string-db.org/network/257313.BP0477 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| BP0478 protein network | https://string-db.org/network/257313.BP0478 | Probable hydrolase; Similar to Erwinia chrysanthemi indigoidine systhesis protein IdgB TR:Q9KHB5 (EMBL:AF265211) (230 aa) fasta scores: E(): 4.8e-18, 40.777% id in 206 aa, and to Pseudomonas aeru [...] |
| msrP protein network | https://string-db.org/network/257313.BP0479 | Conserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus prote [...] |
| msrQ protein network | https://string-db.org/network/257313.BP0480 | Putative membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects t [...] |
| BP0483 protein network | https://string-db.org/network/257313.BP0483 | Conserved hypothetical protein (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to Agrobacterium tumefaciens Agr_l_695p TR:AAK88921 (EMBL:AE008234) (577 [...] |
| lldD protein network | https://string-db.org/network/257313.BP0484 | Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or B3605 SW:LLDD_ECOLI (P33232) (396 aa) fasta scores: E(): 3.5e-63, 46.825% id in 378 aa, and to Pseudomonas aeruginosa L-lactate [...] |
| BP0486 protein network | https://string-db.org/network/257313.BP0486 | Probable acylphosphatase (Pseudogene); ~21 bp deletion in pertussis relative to parapertussis downstream of this codon. |
| BP0487 protein network | https://string-db.org/network/257313.BP0487 | Probable amidase; Similar to Pseudomonas aeruginosa probable amidase Pa4342 TR:Q9HW59 (EMBL:AE004850) (494 aa) fasta scores: E(): 3.5e-67, 45.436% id in 482 aa, and to Rhizobium loti amidotransfe [...] |
| BP0488 protein network | https://string-db.org/network/257313.BP0488 | Transcriptional regulator; Similar to Pseudomonas putida pca regulon regulatory protein PcaR SW:PCAR_PSEPU (Q52154) (291 aa) fasta scores: E(): 1.8e-22, 31.250% id in 272 aa, and to Rhizobium mel [...] |
| gyrB protein network | https://string-db.org/network/257313.BP0489 | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...] |
| dnaN protein network | https://string-db.org/network/257313.BP0490 | DNA polymerase iii, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading [...] |
| dnaA protein network | https://string-db.org/network/257313.BP0491 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-st [...] |
| rpmH protein network | https://string-db.org/network/257313.BP0492 | Similar to Escherichia coli 50S ribosomal protein L34 RpmH or SsaF or RimA or B3703 or Z5194 or Ecs4638 SW:RL34_ECOLI (P02437) (46 aa) fasta scores: E(): 1e-10, 65.909% id in 44 aa, and to Neisse [...] |
| rnpA protein network | https://string-db.org/network/257313.BP0493 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...] |
| BP0494 protein network | https://string-db.org/network/257313.BP0494 | Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. |
| yidC protein network | https://string-db.org/network/257313.BP0495 | Probable inner-membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane pro [...] |
| acpD protein network | https://string-db.org/network/257313.BP0498 | N-terminal region of acyl carrier protein phosphodiesterase (pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. The C-terminal region of this CDS is BP3054. Similar [...] |
| BP0499 protein network | https://string-db.org/network/257313.BP0499 | Hypothetical protein; No significant database matches. |
| BP0500 protein network | https://string-db.org/network/257313.BP0500 | Hypothetical protein; No significant database matches. |
| BP0501 protein network | https://string-db.org/network/257313.BP0501 | C-terminal region of two component sensor kinase (partial); Partial. This CDS is the C-terminal region of BP3351 which was disrupted by the integration of a prophage. Similar to Salmonella enteri [...] |
| BP0502 protein network | https://string-db.org/network/257313.BP0502 | Integrase; Similar to Escherichia coli shufflon-specific DNA recombinase Rci SW:RCI1_ECOLI (P10487) (384 aa) fasta scores: E(): 7.5e-17, 30.796% id in 289 aa, and to Pasteurella multocida putativ [...] |
| BP0503 protein network | https://string-db.org/network/257313.BP0503 | Similar to Bacteriophage P4 hypothetical 9.7 kDa protein SW:Y9K_BPP4 (P12552) (88 aa) fasta scores: E(): 0.82, 30.357% id in 56 aa, and to Vibrio cholerae transcriptional regulator Vc0497 TR:Q9KU [...] |
| BP0504 protein network | https://string-db.org/network/257313.BP0504 | Phage-related hypothetical protein; No significant database matches. |
| BP0505 protein network | https://string-db.org/network/257313.BP0505 | Phage-related conserved hypothetical protein; Similar to Bacteriophage D3 Orf39 orf39 TR:Q9MC83 (EMBL:AF165214) (108 aa) fasta scores: E(): 0.018, 36.937% id in 111 aa, and to Mycobacteriophage T [...] |
| BP0506 protein network | https://string-db.org/network/257313.BP0506 | Phage-related hypothetical protein; No significant database matches. |
| BP0507 protein network | https://string-db.org/network/257313.BP0507 | Hypothetical protein; Similar to the internal region of Bordetella pertussis pertactin outer membrane protein PrnA TR:AAK92093 (EMBL:AF348485) (910 aa) fasta scores: E(): 2.5, 25.767% id in 163 a [...] |
| BP0508 protein network | https://string-db.org/network/257313.BP0508 | Similar to Escherichia coli O157:H7 exonuclease Ecs1174 TR:BAB34597 (EMBL:AP002554) (226 aa) fasta scores: E(): 2.4e-11, 30.918% id in 207 aa, and to Bacteriophage VT2-Sa exonuclease Exo TR:Q9T1N [...] |
| BP0509 protein network | https://string-db.org/network/257313.BP0509 | Phage-related DNA recombination protein; Similar to Escherichia coli RecT protein RecT or B1349 SW:RECT_ECOLI (P33228) (269 aa) fasta scores: E(): 3.4e-09, 30.047% id in 213 aa, and to Escherichi [...] |
| BP0510 protein network | https://string-db.org/network/257313.BP0510 | Phage-related putative membrane protein; No significant database matches. |
| BP0511 protein network | https://string-db.org/network/257313.BP0511 | Phage-related hypothetical protein; No significant database matches. |
| BP0513 protein network | https://string-db.org/network/257313.BP0513 | Phage-related hypothetical protein (pseudogene); No significant database matches. |
| BP0514 protein network | https://string-db.org/network/257313.BP0514 | Transposase for IS481 element. |
| BP0515 protein network | https://string-db.org/network/257313.BP0515 | Phage-related hypothetical protein; No significant database matches. |
| BP0516 protein network | https://string-db.org/network/257313.BP0516 | Hypothetical protein; No significant database matches. |
| BP0517 protein network | https://string-db.org/network/257313.BP0517 | Transposase for IS481 element. |
| BP0518 protein network | https://string-db.org/network/257313.BP0518 | Conserved hypothetical protein; Similar to Saccharomyces cerevisiae highdosage growth inhibitor Hig1 TR:BAB20815 (EMBL:AB050475) (129 aa) fasta scores: E(): 6.3e-10, 34.579% id in 107 aa, and to [...] |
| BP0519 protein network | https://string-db.org/network/257313.BP0519 | Probable glutathione S-transferase; Similar to Loligo opalescens S-crystallin TR:Q25368 (EMBL:U19300) (217 aa) fasta scores: E(): 3.2e-06, 24.537% id in 216 aa, and to Rhizobium meliloti probable [...] |
| BP0520 protein network | https://string-db.org/network/257313.BP0520 | Putative exported protein; Similar to Escherichia coli HflC protein HflC or HflA or B4175 or Z5782 or Ecs5151 SW:HFLC_ECOLI (P25661) (334 aa) fasta scores: E(): 2.4e-06, 24.806% id in 258 aa, and [...] |
| BP0521 protein network | https://string-db.org/network/257313.BP0521 | Similar to Escherichia coli hypothetical 12.0 kDa protein in baeR-ogrK intergenic region YegP or B2080 SW:YEGP_ECOLI (P76402) (110 aa) fasta scores: E(): 2.1e-17, 54.545% id in 110 aa, and to Pas [...] |
| BP0522 protein network | https://string-db.org/network/257313.BP0522 | Similar to Arthrobacter sp metal-activated pyridoxal enzyme TR:O82872 (EMBL:AB010956) (379 aa) fasta scores: E(): 1.6e-16, 31.026% id in 390 aa, and to Agrobacterium tumefaciens Agr_l_1808p TR:AA [...] |
| BP0523 protein network | https://string-db.org/network/257313.BP0523 | Probable haloacid dehalogenase; Similar to Pseudomonas putida 2-haloalkanoic acid dehalogenase H-109 DehH109 SW:HAD2_PSEPU (Q59728) (224 aa) fasta scores: E(): 1.5e-05, 28.241% id in 216 aa, and [...] |
| BP0525 protein network | https://string-db.org/network/257313.BP0525 | Probable transcriptional regulator (Pseudogene); (GGCGCGC)3 in pertussis; (GGCGCGC)2 in parapertussis and bronchiseptica. |
| BP0526 protein network | https://string-db.org/network/257313.BP0526 | Hypothetical protein; No significant database matches. |
| ecnA1 protein network | https://string-db.org/network/257313.BP0527 | Similar to Escherichia coli anti-toxin entericidin A precursor EcnA or B4147.1 SW:ECNA_ECOLI (P56548) (41 aa) fasta scores: E(): 0.86, 42.857% id in 42 aa, and to Rickettsia conorii hypothetical [...] |
| BP0529 protein network | https://string-db.org/network/257313.BP0529 | Autotransporter; Similar to Mycobacterium tuberculosis PgrS-family protein Rv3345c or Mtv004.01C or Mtv016.45C TR:O53395 (EMBL:AL021841) (1538 aa) fasta scores: E(): 5.8e-17, 26.329% id in 1618 a [...] |
| BP0530 protein network | https://string-db.org/network/257313.BP0530 | Conserved hypothetical protein; Similar to Burkholderia cepacia ureidoglycolate hydrolase AllA TR:Q9AP01 (EMBL:AF317836) (177 aa) fasta scores: E(): 0.0025, 28.289% id in 152 aa, and to Rhodobact [...] |
| BP0531 protein network | https://string-db.org/network/257313.BP0531 | Putative exported protein; Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 3.2e-27, 34.323% id in 303 aa, and to Comamo [...] |
| BP0532 protein network | https://string-db.org/network/257313.BP0532 | Putative substrate-CoA ligase; Similar to Mycobacterium tuberculosis CDC1551 substrate--CoA ligase Mt2580 TR:AAK46884 (EMBL:AE007094) (547 aa) fasta scores: E(): 2.8e-44, 32.422% id in 512 aa, an [...] |
| BP0533 protein network | https://string-db.org/network/257313.BP0533 | Probable transcriptional regulator; Similar to Pseudomonas putida efflux pump regulator SrpS TR:Q9R9U0 (EMBL:AF061937) (259 aa) fasta scores: E(): 4.8e-12, 33.471% id in 242 aa, and to Streptomyc [...] |
| BP0534 protein network | https://string-db.org/network/257313.BP0534 | Probable enoyl-CoA hydratase/isomerase; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 1.8e-17, 31.624% id [...] |
| BP0535 protein network | https://string-db.org/network/257313.BP0535 | Probable carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration [...] |
| BP0537 protein network | https://string-db.org/network/257313.BP0537 | Putative exported protein (Pseudogene); ScanRegExp hit to PS00237, G-protein coupled receptors family 1 signature. |
| BP0538 protein network | https://string-db.org/network/257313.BP0538 | Arginase; Similar to Bacillus caldovelox arginase RocF SW:ARGI_BACCD (P53608) (299 aa) fasta scores: E(): 3.5e-44, 44.000% id in 300 aa, and to Rhizobium loti arginase Mll6778 TR:Q988E1 (EMBL:AP0 [...] |
| rocD protein network | https://string-db.org/network/257313.BP0539 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. |
| BP0540 protein network | https://string-db.org/network/257313.BP0540 | Transposase for IS481 element. |
| BP0541 protein network | https://string-db.org/network/257313.BP0541 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1269 TR:Q9I475 (EMBL:AE004556) (222 aa) fasta scores: E(): 1.7e-28, 42.347% id in 196 aa, and to Rhizobium loti transcriptio [...] |
| BP0542 protein network | https://string-db.org/network/257313.BP0542 | Putative exported protein; Similar to Pseudomonas chlororaphis hypothetical 35.8 kDa protein TR:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): 1.2e-36, 39.264% id in 326 aa, and to Pseudomona [...] |
| BP0543 protein network | https://string-db.org/network/257313.BP0543 | Conserved hypothetical protein; Similar to Rhizobium loti probable oxidoreductase Mll7103 TR:Q987C9 (EMBL:AP003011) (427 aa) fasta scores: E(): 1.1e-46, 39.394% id in 396 aa, and to Pseudomonas a [...] |
| BP0544 protein network | https://string-db.org/network/257313.BP0544 | Similar to Streptococcus thermophilus putative 4-oxalocrotonate tautomerase subunit 4-OT TR:Q9EVV8 (EMBL:AJ251800) (61 aa) fasta scores: E(): 0.0013, 38.182% id in 55 aa, and to Sphingomonas chun [...] |
| rimO protein network | https://string-db.org/network/257313.BP0545 | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. |
| BP0546 protein network | https://string-db.org/network/257313.BP0546 | Bacterioferritin; Similar to Azotobacter vinelandii bacterioferritin Bfr SW:BFR_AZOVI (P22759) (156 aa) fasta scores: E(): 3.5e-05, 30.345% id in 145 aa, and to Pseudomonas aeruginosa probable ba [...] |
| BP0547 protein network | https://string-db.org/network/257313.BP0547 | Similar to Eikenella corrodens lysine decarboxylase TR:Q9Z4R8 (EMBL:U89166) (183 aa) fasta scores: E(): 7.3e-25, 43.353% id in 173 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4923 SW [...] |
| BP0548 protein network | https://string-db.org/network/257313.BP0548 | Hypothetical protein; No significant database matches. |
| BP0549 protein network | https://string-db.org/network/257313.BP0549 | Similar to Caulobacter crescentus hydrolase, haloacid dehalogenase-like family cc1643 TR:Q9A7S7 (EMBL:AE005839) (246 aa) fasta scores: E(): 2.3e-26, 42.574% id in 202 aa, and to Agrobacterium rad [...] |
| BP0550 protein network | https://string-db.org/network/257313.BP0550 | Similar to Caulobacter crescentus hypothetical protein Cc2577 TR:Q9A580 (EMBL:AE005926) (204 aa) fasta scores: E(): 4.3e-46, 60.099% id in 203 aa, and to Rhizobium loti Mll0539 protein TR:Q98MK8 [...] |
| fmt protein network | https://string-db.org/network/257313.BP0551 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...] |
| def protein network | https://string-db.org/network/257313.BP0552 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine i [...] |
| kynU protein network | https://string-db.org/network/257313.BP0553 | Conserved hypothetical protein; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respective [...] |
| lrp protein network | https://string-db.org/network/257313.BP0554 | Similar to Escherichia coli leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or Oppi or b0889 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 4.8e-16, 38.667% id in 150 aa, and [...] |
| smf protein network | https://string-db.org/network/257313.BP0555 | Conserved hypothetical protein; Similar to Escherichia coli Smf protein Smf or B3285/B3286 SW:SMF_ECOLI (P30852) (374 aa) fasta scores: E(): 1.5e-32, 43.974% id in 307 aa, and to Pseudomonas aeru [...] |
| hmgcL protein network | https://string-db.org/network/257313.BP0556 | Similar to Gallus gallus hydroxymethylglutaryl-CoA lyase HmgcL SW:HMGL_CHICK (P35915) (298 aa) fasta scores: E(): 1.8e-60, 54.452% id in 292 aa, and to Pseudomonas aeruginosa hydroxymethylglutary [...] |
| BP0557 protein network | https://string-db.org/network/257313.BP0557 | Putative membrane protein; No significant database matches. |
| BP0558 protein network | https://string-db.org/network/257313.BP0558 | Similar to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein AapJ precursor SW:AAPJ_RHILV (Q52812) (341 aa) fasta scores: E(): 3.3e-75, 56.932% id in 339 aa, and to Vibrio [...] |
| BP0559 protein network | https://string-db.org/network/257313.BP0559 | Probable aminotransferase; Similar to Thermococcus profundus multiple substrate aminotransferase TR:Q9V2W5 (EMBL:AB027131) (417 aa) fasta scores: E(): 2.9e-42, 36.693% id in 387 aa, and to Strept [...] |
| BP0561 protein network | https://string-db.org/network/257313.BP0561 | Conserved hypothetical protein (Pseudogene); CAT in pertussis; C(-)T in parapertussis and bronchiseptica. |
| BP0562 protein network | https://string-db.org/network/257313.BP0562 | Putative exported protein; Similar to Rhizobium loti Mll3326 protein TR:Q98GH4 (EMBL:AP003001) (179 aa) fasta scores: E(): 6.4e-18, 41.830% id in 153 aa, and to Neisseria meningitidis hypothetica [...] |
| BP0563 protein network | https://string-db.org/network/257313.BP0563 | Similar to Streptomyces coelicolor putative LysR-family transcriptional regulator Sc5f8.17C TR:Q9K4K7 (EMBL:AL357613) (300 aa) fasta scores: E(): 2.8e-46, 46.644% id in 298 aa, and to Agrobacteri [...] |
| BP0564 protein network | https://string-db.org/network/257313.BP0564 | Probable transporter; Similar to Streptomyces coelicolor putative membrane transport protein Sc5f8.18 TR:Q9K4K6 (EMBL:AL357613) (204 aa) fasta scores: E(): 4.7e-24, 42.714% id in 199 aa, and to P [...] |
| BP0565 protein network | https://string-db.org/network/257313.BP0565 | Transposase for IS481 element. |
| BP0566 protein network | https://string-db.org/network/257313.BP0566 | Putative dioxygenase; Similar to Rhizobium meliloti hypothetical/unknown protein Smc01026 TR:CAC46020 (EMBL:AL591787) (296 aa) fasta scores: E(): 0.25, 27.090% id in 299 aa, and to Agrobacterium [...] |
| nadX1 protein network | https://string-db.org/network/257313.BP0567 | Conserved hypothetical protein; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate. |
| BP0568 protein network | https://string-db.org/network/257313.BP0568 | Putative amino acid efflux protein; Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or B3824 SW:RHTB_ECOLI (P27847) (206 aa) fasta scores: E(): 1.6e-14, 31.100% id i [...] |
| BP0569 protein network | https://string-db.org/network/257313.BP0569 | Conserved hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. |
| BP0570 protein network | https://string-db.org/network/257313.BP0570 | Putative exported protein; Similar to Neisseria meningitidis hypothetical protein Nma0161 TR:Q9JWZ1 (EMBL:AL162752) (199 aa) fasta scores: E(): 3.5e-12, 31.088% id in 193 aa, and to Neisseria men [...] |
| BP0571 protein network | https://string-db.org/network/257313.BP0571 | Putative two-component sensor kinase; Similar to Azorhizobium caulinodans nitrogen regulation protein NtrY SW:NTRY_AZOCA (Q04850) (771 aa) fasta scores: E(): 8.8e-14, 29.107% id in 773 aa, and to [...] |
| BP0572 protein network | https://string-db.org/network/257313.BP0572 | Putative two-component response regulator; Similar to Salmonella typhimurium transcriptional regulatory protein HydG SW:HYDG_SALTY (P25852) (441 aa) fasta scores: E(): 7.1e-09, 35.849% id in 159 [...] |
| trkA protein network | https://string-db.org/network/257313.BP0573 | Similar to Escherichia coli Trk system potassium uptake protein TrkA or B3290 or Z4660 or Ecs4155 SW:TRKA_ECOLI (P23868) (458 aa) fasta scores: E(): 6.9e-78, 48.478% id in 460 aa, and to Salmonel [...] |
| trkH protein network | https://string-db.org/network/257313.BP0574 | Trk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. |
| BP0575 protein network | https://string-db.org/network/257313.BP0575 | Similar to Escherichia coli transcriptional regulator protein SlyA TR:Q9F8R8 (EMBL:AF242208) (135 aa) fasta scores: E(): 2.1e-06, 29.630% id in 135 aa, and to Streptomyces coelicolor putative tra [...] |
| BP0576 protein network | https://string-db.org/network/257313.BP0576 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4618 TR:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 7.3e-44, 42.271% id in 317 aa. Also similar to BP2128, 50.893% identity (53.271 [...] |
| BP0577 protein network | https://string-db.org/network/257313.BP0577 | Similar to Caulobacter crescentus hypothetical protein Cc0019 TR:Q9AC47 (EMBL:AE005676) (210 aa) fasta scores: E(): 7e-13, 41.176% id in 204 aa, and to Agrobacterium tumefaciens Agr_pat_742p TR:A [...] |
| BP0578 protein network | https://string-db.org/network/257313.BP0578 | Similar to Synechocystis sp hypothetical 38.3 kDa protein Slr0619 TR:Q55861 (EMBL:D64004) (348 aa) fasta scores: E(): 1e-44, 47.569% id in 288 aa, and to Agrobacterium tumefaciens Agr_c_4595p TR: [...] |
| maiA protein network | https://string-db.org/network/257313.BP0579 | Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. |
| BP0581 protein network | https://string-db.org/network/257313.BP0581 | Probable hydrolase (Pseudogene); G in pertussis; G(AG) in parapertussis and bronchiseptica. |
| BP0582 protein network | https://string-db.org/network/257313.BP0582 | Putative isochorismatase; Similar to Arthrobacter sp N-carbamoylsarcosine amidase SW:CSH_ARTSP (P32400) (264 aa) fasta scores: E(): 2e-14, 32.673% id in 202 aa, and to Thermoplasma volcanium isoc [...] |
| BP0583 protein network | https://string-db.org/network/257313.BP0583 | Probable ring hydroxylating beta subunit; Similar to Pseudomonas sp salicylate-5-hydroxylase small oxygenase component NagH TR:O52380 (EMBL:AF036940) (161 aa) fasta scores: E(): 1.4e-17, 36.364% [...] |
| BP0584 protein network | https://string-db.org/network/257313.BP0584 | Probable Ring hydroxylating alpha subunit; Similar to Pseudomonas sp salicylate-5-hydroxylase large oxygenase component NagG TR:O52379 (EMBL:AF036940) (423 aa) fasta scores: E(): 4.2e-80, 46.731% [...] |
| BP0585 protein network | https://string-db.org/network/257313.BP0585 | Similar to Pseudomonas sp ferredoxin reductase BphA4 TR:Q52437 (EMBL:D16831) (408 aa) fasta scores: E(): 5.8e-45, 40.244% id in 410 aa, and to Rhizobium meliloti MocF TR:Q9R9P5 (EMBL:AF076471) (4 [...] |
| BP0586 protein network | https://string-db.org/network/257313.BP0586 | Ferredoxin; Similar to Pseudomonas putida naphthalene 1,2-dioxygenase system ferredoxin component NdoA or NahaB or DoxA or NdoC1 SW:NDOA_PSEPU (P23082) (103 aa) fasta scores: E(): 1.4e-20, 55.882 [...] |
| BP0589 protein network | https://string-db.org/network/257313.BP0589 | Putative exported protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. |
| BP0590 protein network | https://string-db.org/network/257313.BP0590 | Oxidoreductase, large chain; Similar to Pseudomonas putida quinoline 2-oxidoreductase, large chain QorL TR:P72224 (EMBL:X98131) (788 aa) fasta scores: E(): 1.2e-91, 36.882% id in 789 aa, and to M [...] |
| BP0591 protein network | https://string-db.org/network/257313.BP0591 | Oxidoreductase, medium chain; Similar to Pseudomonas putida quinoline 2-oxidoreductase, medium chain QorM TR:P72222 (EMBL:X98131) (288 aa) fasta scores: E(): 4.4e-20, 38.182% id in 220 aa, and to [...] |
| BP0592 protein network | https://string-db.org/network/257313.BP0592 | Putative iron-sulfur binding protein; The N-terminal region of this CDS is similar to Pseudomonas putida quinoline 2-oxidoreductase, small chain QorS TR:P72223 (EMBL:X98131) (168 aa) fasta scores [...] |
| BP0593 protein network | https://string-db.org/network/257313.BP0593 | Putative exported protein; Similar to Rhizobium loti Mlr6799 protein Mlr6799 TR:Q988C5 (EMBL:AP003010) (336 aa) fasta scores: E(): 1.4e-16, 27.879% id in 330 aa, and to Agrobacterium tumefaciens [...] |
| BP0594 protein network | https://string-db.org/network/257313.BP0594 | Probable ABC transporter, ATP-binding component; Similar to Arthrobacter keyseri transporter ATPase PtrA TR:Q9AGL2 (EMBL:AF331043) (275 aa) fasta scores: E(): 3.8e-32, 48.018% id in 227 aa, and t [...] |
| BP0595 protein network | https://string-db.org/network/257313.BP0595 | Similar to Rhizobium loti ABC transporter, permease protein Mlr6798 TR:Q988C6 (EMBL:AP003010) (275 aa) fasta scores: E(): 9.2e-31, 39.592% id in 245 aa, and to Agrobacterium tumefaciens Agr_l_128 [...] |
| BP0596 protein network | https://string-db.org/network/257313.BP0596 | Putative membrane protein; Similar to Rhizobium loti Mll5171 protein Mll5171 TR:Q98CF5 (EMBL:AP003005) (194 aa) fasta scores: E(): 5.1e-34, 50.785% id in 191 aa, and to Agrobacterium tumefaciens [...] |
| BP0597 protein network | https://string-db.org/network/257313.BP0597 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04249 TR:CAC46498 (EMBL:AL591788) (597 aa) fasta scores: E(): 4.8e-127, 61.922% id in 562 aa, and to [...] |
| BP0598 protein network | https://string-db.org/network/257313.BP0598 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfa [...] |
| bioC protein network | https://string-db.org/network/257313.BP0599 | Conserved hypothetical protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthes [...] |
| BP0600 protein network | https://string-db.org/network/257313.BP0600 | Conserved hypothetical protein; Similar to Pseudomonas aeruginosa probable phosphoribosyl transferase Pa0489 TR:Q9I629 (EMBL:AE004486) (241 aa) fasta scores: E(): 2.9e-13, 39.109% id in 202 aa, a [...] |
| trmL protein network | https://string-db.org/network/257313.BP0601 | rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L [...] |
| gpsA protein network | https://string-db.org/network/257313.BP0603 | Putative exported protein (Pseudogene); (CT)2 in pertussis; (CT)1 in parapertussis and bronchiseptica; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. |
| secB protein network | https://string-db.org/network/257313.BP0604 | Protein-export protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, main [...] |
| grxC protein network | https://string-db.org/network/257313.BP0605 | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. |
| BP0606 protein network | https://string-db.org/network/257313.BP0606 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5130 TR:Q9HU54 (EMBL:AE004926) (139 aa) fasta scores: E(): 6.5e-09, 33.846% id in 130 aa, and to Xylella fastidiosa hypothetical protein X [...] |
| gpmA protein network | https://string-db.org/network/257313.BP0607 | Phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. |
| BP0608 protein network | https://string-db.org/network/257313.BP0608 | Putative peptidase; Similar to Pseudomonas aeruginosa hypothetical protein Pa5133 TR:Q9HU51 (EMBL:AE004926) (428 aa) fasta scores: E(): 4.3e-20, 33.665% id in 502 aa, and to Escherichia coli hypo [...] |
| ctpA protein network | https://string-db.org/network/257313.BP0609 | Similar to Bartonella bacilliformis carboxy-terminal processing protease precursor CtpA SW:CTPA_BARBA (Q44879) (434 aa) fasta scores: E(): 8.3e-36, 44.545% id in 440 aa, and to Bartonella quintan [...] |
| thiF protein network | https://string-db.org/network/257313.BP0610 | Adenylyltransferase; Similar to Escherichia coli adenylyltransferase ThiF or B3992 SW:THIF_ECOLI (P30138) (251 aa) fasta scores: E(): 1.1e-41, 50.000% id in 252 aa, and to Pseudomonas aeruginosa [...] |
| BP0611 protein network | https://string-db.org/network/257313.BP0611 | Transposase for IS481 element. |
| BP0612 protein network | https://string-db.org/network/257313.BP0612 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.5e-37, 36.196% id in 326 aa, and to Comam [...] |
| BP0613 protein network | https://string-db.org/network/257313.BP0613 | Probable transcriptional regulator; Similar to Erwinia chrysanthemi pectin degradation repressor protein KdgR SW:KDGR_ERWCH (P37728) (305 aa) fasta scores: E(): 1.7e-11, 29.057% id in 265 aa, and [...] |
| BP0615 protein network | https://string-db.org/network/257313.BP0615 | Putative exported protein (Pseudogene); ACA in pertussis; (G)ACA in bronchiseptica. |
| BP0616 protein network | https://string-db.org/network/257313.BP0616 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein Mt3614 TR:AAK47972 (EMBL:AE007164) (278 aa) fasta scores: E(): 4.2e-15, 27.698% id in [...] |
| BP0617 protein network | https://string-db.org/network/257313.BP0617 | Similar to Caulobacter crescentus transcriptional regulator, TetR family Cc0992 TR:Q9A9I8 (EMBL:AE005777) (210 aa) fasta scores: E(): 1.8e-13, 34.503% id in 171 aa, and to Rhodococcus spNCIMB 978 [...] |
| lpdA protein network | https://string-db.org/network/257313.BP0618 | Similar to Escherichia coli dihydrolipoamide dehydrogenase LpdA or Lpd or B0116 SW:DLDH_ECOLI (P00391) (473 aa) fasta scores: E(): 4.1e-94, 55.579% id in 466 aa, and to Salmonella enterica subspe [...] |
| BP0619 protein network | https://string-db.org/network/257313.BP0619 | Similar to Thermotoga maritima branched chain amino acid ABC transporter, ATP-binding protein Tm1139 TR:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 4.2e-29, 46.186% id in 236 aa, and to De [...] |
| BP0620 protein network | https://string-db.org/network/257313.BP0620 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 2.2e-23, 36. [...] |
| BP0621 protein network | https://string-db.org/network/257313.BP0621 | Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 8.7e-22, 32.895% id in 304 a [...] |
| BP0622 protein network | https://string-db.org/network/257313.BP0622 | Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 5e-13, 28.428% id in 299 aa, and to Rhizobium meliloti probable [...] |
| BP0624 protein network | https://string-db.org/network/257313.BP0624 | Conserved hypothetical protein (Pseudogene); In-frame TAA stop codon in pertussis; CAA in bronchiseptica. |
| BP0625 protein network | https://string-db.org/network/257313.BP0625 | Probable acyl-CoA dehydrogenase; Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 8.8e-34, 33.425% id in 362 aa, and to Archaeoglobus fulgidus acyl-CoA de [...] |
| BP0627 protein network | https://string-db.org/network/257313.BP0627 | ScanRegExp hit to PS00189, 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. Confirmed by InterPro eMOTIF pattern match. |
| BP0628 protein network | https://string-db.org/network/257313.BP0628 | Similar to Zea mays pyruvate dehydrogenase E1 beta subunit isoform 2 Pdh2 TR:Q9ZQY2 (EMBL:AF069909) (374 aa) fasta scores: E(): 4.3e-56, 47.077% id in 325 aa, and to Rhizobium loti acetoin dehydr [...] |
| pdhA protein network | https://string-db.org/network/257313.BP0629 | Putative pyruvate dehydrogenase E1 component, alpha subunit; Similar to Clostridium magnum TPP-dependent acetoin dehydrogenase alpha-subunit TR:Q46142 (EMBL:L31844) (326 aa) fasta scores: E(): 8. [...] |
| BP0630 protein network | https://string-db.org/network/257313.BP0630 | Probable transcriptional regulator; Similar to Escherichia coli negative regulator of allantoin and glyoxylate utilization operons AllR or GlxA3 or B0506 or Z0660 or Ecs0567 SW:ALLR_ECOLI (P77734 [...] |
| BP0633 protein network | https://string-db.org/network/257313.BP0633 | C-terminus truncated putative pimeloyl-CoA synthetase (Pseudogene); HMMPfam hit to PF02629, CoA binding domain. |
| BP0634 protein network | https://string-db.org/network/257313.BP0634 | Similar to Bacillus subtilis acyl-CoA dehydrogenase AcdA or Acd SW:ACDA_BACSU (P45867) (379 aa) fasta scores: E(): 1.1e-49, 40.849% id in 377 aa, and to Bacillus halodurans acyl-CoA dehydrogenase [...] |
| BP0635 protein network | https://string-db.org/network/257313.BP0635 | Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 5.2e-25, 33.846% id in 260 aa, and to Rhizobium meliloti putative enoyl-C [...] |
| BP0636 protein network | https://string-db.org/network/257313.BP0636 | Conserved hypothetical protein; Similar to Rhodococcus spNCIMB 9784 non-specific lipid carrier-like protein CampC TR:AAK50624 (EMBL:AF323755) (408 aa) fasta scores: E(): 8.1e-37, 35.106% id in 37 [...] |
| BP0637 protein network | https://string-db.org/network/257313.BP0637 | Similar to Thermoplasma volcanium hypothetical protein Tvg0142586 TR:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 1.1e-07, 36.522% id in 115 aa, and to Archaeoglobus fulgidus conserved hypo [...] |
| BP0638 protein network | https://string-db.org/network/257313.BP0638 | Hypothetical protein; No significant database matches. |
| BP0639 protein network | https://string-db.org/network/257313.BP0639 | Conserved hypothetical protein; Similar to Archaeoglobus fulgidus monoamine oxidase regulatory protein, putative Af0198 TR:O30041 (EMBL:AE001092) (146 aa) fasta scores: E(): 6.9e-07, 44.444% id i [...] |
| BP0640 protein network | https://string-db.org/network/257313.BP0640 | Probable acyl-CoA dehydrogenase; Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 3.6e-38, 33.858% id in 381 aa, and to Pseudomonas aeruginosa probable ac [...] |
| BP0641 protein network | https://string-db.org/network/257313.BP0641 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-40, 40.000% id in 315 aa, and to Agrob [...] |
| BP0642 protein network | https://string-db.org/network/257313.BP0642 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 TR:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.9e-30, 35.567% id in 388 aa, and to Rhodococcus erythropolis putative dehydra [...] |
| BP0643 protein network | https://string-db.org/network/257313.BP0643 | LysR-family transcriptional regulator; Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 1.9e-27, 34.843% id in 287 aa [...] |
| BP0644 protein network | https://string-db.org/network/257313.BP0644 | Similar to Thermotoga maritima dihydrodipicolinate synthase DapA or Tm1521 SW:DAPA_THEMA (Q9X1K9) (294 aa) fasta scores: E(): 8.1e-16, 28.400% id in 250 aa, and to Agrobacterium tumefaciens Agr_p [...] |
| BP0645 protein network | https://string-db.org/network/257313.BP0645 | Transposase for IS481 element. |
| BP0646 protein network | https://string-db.org/network/257313.BP0646 | Transposase for IS481 element. |
| BP0647 protein network | https://string-db.org/network/257313.BP0647 | Similar to Pyrococcus abyssi hypothetical 13.6 kDa protein Pab1062 TR:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4e-09, 30.328% id in 122 aa, and to Pyrococcus horikoshii hypothetical 14. [...] |
| BP0649 protein network | https://string-db.org/network/257313.BP0649 | Conserved hypothetical protein (Pseudogene); (CGCGG)2 in pertussis; (CGCGG)3 in bronchiseptica. |
| BP0650 protein network | https://string-db.org/network/257313.BP0650 | LysR-family transcriptional regulator; Similar to Azospirillum brasilense galactose-binding protein regulator GbpR SW:GBPR_AZOBR (P52661) (342 aa) fasta scores: E(): 1.7e-23, 31.683% id in 303 aa [...] |
| dld protein network | https://string-db.org/network/257313.BP0651 | D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. |
| BP0652 protein network | https://string-db.org/network/257313.BP0652 | Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1311 TR:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 2.8e-46, 40.476% id in 378 aa, and to Pseudomonas aeruginosa p [...] |
| BP0653 protein network | https://string-db.org/network/257313.BP0653 | Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1310 TR:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 2e-81, 50.495% id in 404 aa, and to Pseudomonas aeruginosa pro [...] |
| BP0654 protein network | https://string-db.org/network/257313.BP0654 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.4e-36, 37.690% id in 329 aa, and to Rhizobium meliloti conserved [...] |
| BP0655 protein network | https://string-db.org/network/257313.BP0655 | Similar to Escherichia coli acetylornithine deacetylase ArgE or B3957 SW:ARGE_ECOLI (P23908) (383 aa) fasta scores: E(): 4.8e-26, 32.454% id in 379 aa, and to Pseudomonas aeruginosa probable pept [...] |
| BP0656 protein network | https://string-db.org/network/257313.BP0656 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5391 TR:Q9HTH3 (EMBL:AE004951) (224 aa) fasta scores: E(): 1.9e-54, 68.304% id in 224 aa, and to Aeropyrum pernix hypothetical 32.5 kDa pr [...] |
| BP0657 protein network | https://string-db.org/network/257313.BP0657 | Putative endoribonuclease; Similar to Pseudomonas aeruginosa hypothetical protein Pa5392 TR:Q9HTH2 (EMBL:AE004951) (140 aa) fasta scores: E(): 5.7e-50, 92.086% id in 139 aa, and to Rhizobium meli [...] |
| BP0658 protein network | https://string-db.org/network/257313.BP0658 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5393 TR:Q9HTH1 (EMBL:AE004951) (450 aa) fasta scores: E(): 2.8e-129, 75.962% id in 416 aa, and to Synechocystis sp hypothetical 46.6 kDa p [...] |
| BP0659 protein network | https://string-db.org/network/257313.BP0659 | Probable zinc-binding dehydrogenase; Similar to Escherichia coli protein YhdH or B3253 SW:YHDH_ECOLI (P26646) (324 aa) fasta scores: E(): 3.9e-65, 57.500% id in 320 aa, and to Rhizobium loti dehy [...] |
| BP0660 protein network | https://string-db.org/network/257313.BP0660 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0218 TR:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 9.4e-28, 32.886% id in 298 aa, and to Rhizobium loti transcriptio [...] |
| BP0661 protein network | https://string-db.org/network/257313.BP0661 | Similar to Entamoeba histolytica acetyl-CoA synthetase TR:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 7.1e-57, 32.460% id in 687 aa, and to Pseudomonas aeruginosa pimeloyl-CoA synthetase p [...] |
| BP0662 protein network | https://string-db.org/network/257313.BP0662 | Probable enoyl-CoA hydratase; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 8.8e-24, 33.725% id in 255 aa [...] |
| BP0663 protein network | https://string-db.org/network/257313.BP0663 | Conserved hypothetical protein; Similar to Streptomyces coelicolor putative lipoprotein Scbac1a6.20C TR:Q9ADG7 (EMBL:AL589708) (367 aa) fasta scores: E(): 0.0011, 26.549% id in 226 aa, and to Pse [...] |
| BP0664 protein network | https://string-db.org/network/257313.BP0664 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-44, 39.752% id in 322 aa, and to Agrob [...] |
| BP0665 protein network | https://string-db.org/network/257313.BP0665 | Similar to Saccharopolyspora erythraea thymidine diphosphoglucose 4,6-dehydratase Gdh TR:Q54116 (EMBL:L37354) (329 aa) fasta scores: E(): 2.7e-13, 26.524% id in 328 aa, and to Streptomyces tenebr [...] |
| glmS protein network | https://string-db.org/network/257313.BP0666 | Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen sourc [...] |
| BP0667 protein network | https://string-db.org/network/257313.BP0667 | Similar to Escherichia coli hypothetical transcriptional regulator YbaO or B0447 SW:YBAO_ECOLI (P54986) (152 aa) fasta scores: E(): 2.4e-13, 33.333% id in 150 aa, and to Haemophilus influenzae hy [...] |
| BP0668 protein network | https://string-db.org/network/257313.BP0668 | Probable thiolase; Similar to Cucurbita maxima 3-ketoacyl-CoA thiolase precursor TR:P93112 (EMBL:D70895) (461 aa) fasta scores: E(): 1.1e-50, 42.569% id in 397 aa, and to Deinococcus radiodurans [...] |
| BP0669 protein network | https://string-db.org/network/257313.BP0669 | Probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase, bifunctional enzyme; Similar to Cavia porcellus peroxisomal bifunctional enzyme EhhadH SW:ECHP_CAVPO (P55100) (725 aa) fasta scores: [...] |
| BP0670 protein network | https://string-db.org/network/257313.BP0670 | Probable acyl-CoA dehydrogenase; Similar to Escherichia coli AidB protein B4187 SW:AIDB_ECOLI (P33224) (541 aa) fasta scores: E(): 1.4e-32, 30.983% id in 468 aa, and to Pseudomonas aeruginosa pro [...] |
| BP0671 protein network | https://string-db.org/network/257313.BP0671 | Putative exported protein; Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.3e-29, 32.288% id in 319 aa, and to Comamo [...] |
| BP0672 protein network | https://string-db.org/network/257313.BP0672 | acetyl-CoA synthetase; Similar to Pseudomonas mendocina pimeloyl-CoA synthetase TR:Q9ZER2 (EMBL:AJ012480) (711 aa) fasta scores: E(): 2.2e-99, 40.979% id in 715 aa, and to Entamoeba histolytica a [...] |
| BP0673 protein network | https://string-db.org/network/257313.BP0673 | Conserved hypothetical protein; Similar to Chlorobium limicola ATP-citrate lyase alpha-subunit AclA TR:Q9AJC4 (EMBL:AB054670) (608 aa) fasta scores: E(): 0.0026, 21.961% id in 255 aa, and to Meth [...] |
| BP0674 protein network | https://string-db.org/network/257313.BP0674 | Probable transcriptional regulator; Similar to Salmonella typhimurium acetate operon repressor IclR SW:ICLR_SALTY (P17430) (274 aa) fasta scores: E(): 9.3e-08, 25.410% id in 244 aa, and to Caulob [...] |
| BP0675 protein network | https://string-db.org/network/257313.BP0675 | Probable molybdopterin oxidoreductase; Similar to Rhodobacter sphaeroides biotin sulfoxide reductase SW:BISC_RHOSH (P54934) (744 aa) fasta scores: E(): 9.8e-113, 42.457% id in 749 aa, and to Myco [...] |
| BP0676 protein network | https://string-db.org/network/257313.BP0676 | Transposase for IS481 element. |
| hemA protein network | https://string-db.org/network/257313.BP0677 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). |
| prfA protein network | https://string-db.org/network/257313.BP0678 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. |
| hemK protein network | https://string-db.org/network/257313.BP0679 | Heme biosynthesis protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the pro [...] |
| BP0680 protein network | https://string-db.org/network/257313.BP0680 | Similar to Neisseria meningitidis hypothetical protein Nma0984 or Nmb0773 TR:Q9JR73 (EMBL:AL162754) (103 aa) fasta scores: E(): 2.8e-24, 66.337% id in 101 aa, and to Rhizobium meliloti conserved [...] |
| ubiX protein network | https://string-db.org/network/257313.BP0681 | Probable flavoprotein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltrans [...] |
| BP0682 protein network | https://string-db.org/network/257313.BP0682 | Putative exported protein; Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.4e-38, 36.577% id in 298 aa, and to Rhizob [...] |
| BP0683 protein network | https://string-db.org/network/257313.BP0683 | Similar to Burkholderia cepacia 4,5-dihydroxyphthalate decarboxylase OphC TR:Q9ZFR0 (EMBL:AF095748) (330 aa) fasta scores: E(): 6.3e-68, 49.848% id in 329 aa, and to Comamonas testosteroni 4,5-di [...] |
| BP0684A protein network | https://string-db.org/network/257313.BP0684A | Molybdopterin dehydrogenase (Pseudogene); (T)3 in pertussis; (T)2 in parapertussis and bronchiseptica. |
| BP0685 protein network | https://string-db.org/network/257313.BP0685 | Probable dehydrogenase/oxidase; Similar to Pseudomonas putida quinoline 2-oxidoreductase, large chain QorL TR:P72224 (EMBL:X98131) (788 aa) fasta scores: E(): 7.5e-52, 36.189% id in 782 aa, and t [...] |
| BP0688 protein network | https://string-db.org/network/257313.BP0688 | Conserved hypothetical protein (Pseudogene); In-frame TAG stop codon in pertussis; CAG in parapertussis and bronchiseptica. |
| rlpA protein network | https://string-db.org/network/257313.BP0689 | Putative lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. |
| BP0690 protein network | https://string-db.org/network/257313.BP0690 | Conserved hypothetical protein; Displays ATPase and GTPase activities. |
| BP0692 protein network | https://string-db.org/network/257313.BP0692 | ScanRegExp hit to PS00190, Cytochrome c family heme-binding site signature. |
| hprK protein network | https://string-db.org/network/257313.BP0693 | Hpr serine kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-d [...] |
| rpoP protein network | https://string-db.org/network/257313.BP0694 | Similar to Escherichia coli nitrogen regulatory IIA protein PtsN or RpoP or B3204 SW:PTSN_ECOLI (P31222) (163 aa) fasta scores: E(): 6.2e-13, 40.000% id in 120 aa, and to Alcaligenes eutrophus hy [...] |
| rpoN-2 protein network | https://string-db.org/network/257313.BP0697 | Probable sigma(54) modulation protein (Pseudogene); (CA)2 in pertussis; (CA)1 deleted in parapertussis and bronchiseptica. |
| lptA protein network | https://string-db.org/network/257313.BP0698 | Putative exported protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. |
| BP0699 protein network | https://string-db.org/network/257313.BP0699 | Putative exported protein; Similar to Neisseria meningitidis putative periplasmic hypothetical protein Nma2133 TR:Q9JSU4 (EMBL:AL162758) (193 aa) fasta scores: E(): 0.00062, 23.711% id in 194 aa, [...] |
| BP0700 protein network | https://string-db.org/network/257313.BP0700 | Probable hydrolase; Similar to Neisseria meningitidis hypothetical protein Nma2134 TR:Q9JSU3 (EMBL:AL162758) (178 aa) fasta scores: E(): 3.7e-25, 44.706% id in 170 aa, and to Pseudomonas aerugino [...] |
| BP0701 protein network | https://string-db.org/network/257313.BP0701 | Conserved hypothetical protein; Similar to Escherichia coli GutQ protein GutQ or SrlQ or B2708 SW:GUTQ_ECOLI (P17115) (321 aa) fasta scores: E(): 2e-49, 48.438% id in 320 aa, and to Pseudomonas a [...] |
| purT protein network | https://string-db.org/network/257313.BP0702 | Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N [...] |
| BP0704 protein network | https://string-db.org/network/257313.BP0704 | N-terminal region of TonB dependent receptor protein (Pseudogene); Inverted repeat for IS481 element. |
| BP0706 protein network | https://string-db.org/network/257313.BP0706 | Putative C-terminal region of dehydrogenase (Pseudogene); HMMPfam hit to PF00732, GMC oxidoreductase. |
| BP0707 protein network | https://string-db.org/network/257313.BP0707 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 10.8 kDa protein Sce22.04 TR:Q9KYV8 (EMBL:AL355832) (110 aa) fasta scores: E(): 2.8e-07, 34.653% id in 101 aa, and [...] |
| BP0708 protein network | https://string-db.org/network/257313.BP0708 | Putative membrane protein; Similar to Neisseria meningitidis putative integral membrane protein Nma2020 TR:Q9JT22 (EMBL:AL162757) (245 aa) fasta scores: E(): 1.3e-33, 47.143% id in 210 aa, and to [...] |
| aspS protein network | https://string-db.org/network/257313.BP0709 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...] |
| BP0710 protein network | https://string-db.org/network/257313.BP0710 | Putative endonuclease/exonuclease/phosphatase family protein; Similar to Escherichia coli hypothetical protein YbhP or B0790 or Z1009 or Ecs0868 SW:YBHP_ECOLI (P75772) (253 aa) fasta scores: E(): [...] |
| clsB protein network | https://string-db.org/network/257313.BP0711 | Putative phospholipase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. |
| BP0718 protein network | https://string-db.org/network/257313.BP0718 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP0720 protein network | https://string-db.org/network/257313.BP0720 | Conserved hypothetical protein; Similar to Thermoplasma volcanium Tvg1306680 protein TR:Q978Z7 (EMBL:AP000996) (64 aa) fasta scores: E(): 7.1, 33.333% id in 48 aa, and to Agrobacterium tumefacien [...] |
| BP0721 protein network | https://string-db.org/network/257313.BP0721 | Probable aminotransferase; Similar to Bilophila wadsworthia taurine:pyruvate aminotransferase TR:Q9APM5 (EMBL:AF269146) (456 aa) fasta scores: E(): 9.3e-99, 54.000% id in 450 aa, and to Bacillus [...] |
| BP0722 protein network | https://string-db.org/network/257313.BP0722 | Probable amidase; Similar to Bradyrhizobium japonicum indoleacetamide hydrolase Bam SW:HYIN_BRAJA (P19922) (465 aa) fasta scores: E(): 2.6e-45, 39.409% id in 406 aa, and to Streptomyces spR1128 e [...] |
| BP0723 protein network | https://string-db.org/network/257313.BP0723 | Similar to Rhizobium meliloti probable ABC transporter, ATP-binding protein Sma1434 TR:AAK65441 (EMBL:AE007265) (550 aa) fasta scores: E(): 1e-76, 46.125% id in 542 aa, and to Agrobacterium tumef [...] |
| BP0724 protein network | https://string-db.org/network/257313.BP0724 | Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tQ SW:Y4TQ_RHISN (Q53192) (291 aa) fasta scores: E(): 1.4e-52, 53.307% id in 257 aa, and to Rhizobium loti ABC transpor [...] |
| BP0725 protein network | https://string-db.org/network/257313.BP0725 | Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 3.2e-65, 54.839% id in 310 aa, and to Rhizobium loti ABC transpor [...] |
| BP0726 protein network | https://string-db.org/network/257313.BP0726 | Similar to Rhizobium sp probable peptide ABC transporter periplasmic binding protein Y4tO precursor SW:Y4TO_RHISN (P55669) (531 aa) fasta scores: E(): 5.6e-64, 37.786% id in 524 aa, and to Bradyr [...] |
| BP0727 protein network | https://string-db.org/network/257313.BP0727 | Probable transcriptional regulator; Similar to Rhodococcus opacus putative regulator of catechol degradative operon CatR TR:O33539 (EMBL:X99622) (256 aa) fasta scores: E(): 1.1e-17, 33.468% id in [...] |
| BP0728 protein network | https://string-db.org/network/257313.BP0728 | Probable transcriptional regulator; Similar to Streptomyces roseosporus TetR homologue WhiR TR:P72569 (EMBL:U58281) (179 aa) fasta scores: E(): 0.00038, 28.814% id in 118 aa, and to Pseudomonas a [...] |
| BP0729 protein network | https://string-db.org/network/257313.BP0729 | Transposase for IS481 element. |
| nspC protein network | https://string-db.org/network/257313.BP0731 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. |
| BP0732 protein network | https://string-db.org/network/257313.BP0732 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Smb21630 TR:CAC49949 (EMBL:AL603647) (413 aa) fasta scores: E(): 2.6e-117, 67.317% id in 410 aa, and to Agr [...] |
| BP0733 protein network | https://string-db.org/network/257313.BP0733 | Transposase for IS481 element. |
| BP0734 protein network | https://string-db.org/network/257313.BP0734 | Hypothetical protein; No significant database matches. |
| BP0735 protein network | https://string-db.org/network/257313.BP0735 | Putative exported protein; Similar to Xylella fastidiosa hypothetical protein Xf1840 TR:Q9PCE1 (EMBL:AE004005) (237 aa) fasta scores: E(): 4e-29, 47.486% id in 179 aa, and to Zymomonas mobilis hy [...] |
| bfrF protein network | https://string-db.org/network/257313.BP0736 | Similar to Escherichia coli ferrichrome-iron receptor precursor FhuA or TonA or B0150 SW:FHUA_ECOLI (P06971) (747 aa) fasta scores: E(): 7.8e-38, 40.000% id in 725 aa, and to Pseudomonas aerugino [...] |
| BP0737 protein network | https://string-db.org/network/257313.BP0737 | Similar to Bordetella bronchiseptica putative inner membrane sensor BupR TR:Q9L429 (EMBL:AJ251793) (344 aa) fasta scores: E(): 7.6e-19, 33.025% id in 324 aa, and to Pseudomonas aeruginosa probabl [...] |
| BP0739 protein network | https://string-db.org/network/257313.BP0739 | ECF-family sigma factor Pseudogene); T in pertussis; (A)T in parapertussis and bronchiseptica. |
| BP0740 protein network | https://string-db.org/network/257313.BP0740 | Transposase (pseudogene); Inverted repeat for IS481-like element. |
| BP0741 protein network | https://string-db.org/network/257313.BP0741 | Putative transcriptional regulator; Similar to Bacteriophage 434 repressor protein CI SW:RPC1_BP434 (P16117) (94 aa) fasta scores: E(): 1.2, 35.088% id in 57 aa, and to Bacillus subtilis hypothet [...] |
| BP0744 protein network | https://string-db.org/network/257313.BP0744 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP0745 protein network | https://string-db.org/network/257313.BP0745 | Putative transcriptional regulator; Similar to Neisseria cinerea BasR TR:Q9F9Y4 (EMBL:AF139614) (222 aa) fasta scores: E(): 0.17, 28.729% id in 181 aa, and to Bordetella pertussis transcriptional [...] |
| proB protein network | https://string-db.org/network/257313.BP0746 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. |
| obg protein network | https://string-db.org/network/257313.BP0747 | Probable GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Play [...] |
| rpmA protein network | https://string-db.org/network/257313.BP0748 | Similar to Escherichia coli 50S ribosomal protein L27 RpmA or B3185 SW:RL27_ECOLI (P02427) (84 aa) fasta scores: E(): 2.8e-21, 71.084% id in 83 aa, and to Vibrio cholerae ribosomal protein L27 Vc [...] |
| rplU protein network | https://string-db.org/network/257313.BP0749 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. |
| BP0750 protein network | https://string-db.org/network/257313.BP0750 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 41.1 kDa protein Scf41.20C TR:Q9RJU9 (EMBL:AL117387) (390 aa) fasta scores: E(): 2.9e-72, 54.856% id in 381 aa, and [...] |
| ispB protein network | https://string-db.org/network/257313.BP0751 | Similar to Escherichia coli octaprenyl-diphosphate synthase IspB or Cel or B3187 SW:ISPB_ECOLI (P19641) (323 aa) fasta scores: E(): 1.2e-63, 53.560% id in 323 aa, and to Vibrio cholerae octapreny [...] |
| BP0752 protein network | https://string-db.org/network/257313.BP0752 | LysR-family transcriptional regulator; Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 4.6e-23, 34.507% id in 284 aa [...] |
| hyuA protein network | https://string-db.org/network/257313.BP0753 | Similar to Pseudomonas sp hydantoin utilization protein A HyuA SW:HYUA_PSESN (Q01262) (690 aa) fasta scores: E(): 2.8e-78, 35.044% id in 682 aa, and to Rhizobium loti hydantoin utilization protei [...] |
| hyuB protein network | https://string-db.org/network/257313.BP0754 | Similar to Pseudomonas sp hydantoin utilization protein B HyuB SW:HYUB_PSESN (Q01263) (592 aa) fasta scores: E(): 1.7e-52, 31.134% id in 591 aa, and to Rhizobium loti hydantoin utilization protei [...] |
| BP0755 protein network | https://string-db.org/network/257313.BP0755 | Similar to Proteus vulgaris L-amino acid deaminase Lad TR:Q9LCB2 (EMBL:AB030003) (471 aa) fasta scores: E(): 9.2e-29, 31.628% id in 430 aa, and to Proteus mirabilis amino acid deaminase Aad TR:Q5 [...] |
| gabD protein network | https://string-db.org/network/257313.BP0757 | Transposase (Pseudogene); Inverted repeat for IS481 element; Belongs to the aldehyde dehydrogenase family. |
| cyaC protein network | https://string-db.org/network/257313.BP0758 | Cyclolysin-activating lysine-acyltransferase; Involved in fatty acylation of the protoxin (CyaA) at two internal lysine residues, thereby converting it to the active toxin. The acyl donor is ACP; [...] |
| cyaA protein network | https://string-db.org/network/257313.BP0760 | Bifunctional hemolysin-adenylate cyclase precursor; This adenylate cyclase belongs to a special class of bacterial toxin. It causes whooping cough by acting on mammalian cells by elevating cAMP-c [...] |
| cyaB protein network | https://string-db.org/network/257313.BP0761 | Cyclolysin secretion ATP-binding protein; Involved in the export of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin); Belongs to the ABC transporter superfamily. Cyclolysin exporter [...] |
| cyaD protein network | https://string-db.org/network/257313.BP0762 | Cyclolysin secretion protein; CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. |
| cyaE protein network | https://string-db.org/network/257313.BP0763 | Cyclolysin secretion protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin); Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. |
| cyaX protein network | https://string-db.org/network/257313.BP0764 | Probable LysR-family transcriptional regulator; Identical to the previously sequenced Bordetella pertussis unknown Orf CyaX TR:Q45360 (EMBL:X14199) (285 aa) fasta scores: E(): 1.6e-99, 93.411% id [...] |
| BP0765 protein network | https://string-db.org/network/257313.BP0765 | Probable extracellular solute-binding protein; Similar to Escherichia coli amino-acid ABC transporter binding protein YbeJ precursor YbeJ or B0655 SW:YBEJ_ECOLI (P37902) (302 aa) fasta scores: E( [...] |
| gltK-2 protein network | https://string-db.org/network/257313.BP0767 | Glutamate/aspartate transport system permease protein (Pseudogene); (G)5 in pertussis; (G)6 in parapertussis. |
| gltL protein network | https://string-db.org/network/257313.BP0768 | Similar to Escherichia coli glutamate/aspartate transport ATP-binding protein GltL or B0652 or Z0802 or Ecs0691 SW:GLTL_ECOLI (P41076) (241 aa) fasta scores: E(): 5.2e-51, 65.000% id in 240 aa, a [...] |
| BP0769 protein network | https://string-db.org/network/257313.BP0769 | Probable aminotransferase; Similar to Staphylococcus aureus D-alanine aminotransferase TR:Q9KWZ6 (EMBL:Y14816) (282 aa) fasta scores: E(): 4.4e-32, 39.130% id in 276 aa, and to Brucella suis hypo [...] |
| BP0770 protein network | https://string-db.org/network/257313.BP0770 | Putative membrane protein; Similar to Rhizobium meliloti conserved hypothetical protein Smb20087 TR:CAC48487 (EMBL:AL603642) (201 aa) fasta scores: E(): 0.00043, 27.807% id in 187 aa, and to Rhiz [...] |
| BP0771 protein network | https://string-db.org/network/257313.BP0771 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 3e-27, 34.727% id in 311 aa, and to Alcaligenes eutrophus hypotheti [...] |
| FabG-2 protein network | https://string-db.org/network/257313.BP0772 | Similar to Zoogloea ramigera acetoacetyl-CoA reductase PhbB SW:PHBB_ZOORA (P23238) (241 aa) fasta scores: E(): 2.3e-25, 38.710% id in 248 aa, and to Azospirillum brasilense nodulation protein G N [...] |
| BP0773 protein network | https://string-db.org/network/257313.BP0773 | Similar to Methanococcus aeolicus acetohydroxyacid synthase large subunit IlvB TR:O08353 (EMBL:U35458) (599 aa) fasta scores: E(): 2.2e-48, 32.105% id in 570 aa, and to Methanococcus maripaludis [...] |
| BP0774 protein network | https://string-db.org/network/257313.BP0774 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa5525 TR:Q9HT48 (EMBL:AE004965) (246 aa) fasta scores: E(): 8.4e-20, 37.069% id in 232 aa, and to Rhizobium loti probable tra [...] |
| BP0775 protein network | https://string-db.org/network/257313.BP0775 | Hypothetical protein; Similar to the C-terminal region of Serratia marcescens extracellular serine protease precursor SW:PRTS_SERMA (P09489) (1045 aa) fasta scores: E(): 1.2e-19, 30.435% id in 27 [...] |
| BP0776 protein network | https://string-db.org/network/257313.BP0776 | Similar to Chelatobacter heintzii nta operon transcriptional regulator NtaR or NmoR SW:NTRA_CHEHE (P54988) (210 aa) fasta scores: E(): 5.8e-21, 40.476% id in 210 aa, and to EDTA-degrading bacteri [...] |
| BP0777 protein network | https://string-db.org/network/257313.BP0777 | Probable Zinc-binding dehydrogenase; Similar to Rhodopseudomonas palustris putative NADPH:quinone oxidoreductase BadC TR:O07459 (EMBL:U75363) (339 aa) fasta scores: E(): 5.9e-22, 34.393% id in 34 [...] |
| BP0778 protein network | https://string-db.org/network/257313.BP0778 | Putative acetyl-CoA synthetase; Similar to Amycolatopsis spHR167 feruloyl-CoA synthetase Fcs TR:Q9EY88 (EMBL:AJ290449) (491 aa) fasta scores: E(): 2.9e-35, 33.758% id in 471 aa, and to Rhizobium [...] |
| BP0779 protein network | https://string-db.org/network/257313.BP0779 | Weakly similar to Vibrio cholerae hypothetical protein Vca0936 TR:Q9KL13 (EMBL:AE004420) (312 aa) fasta scores: E(): 0.077, 25.258% id in 194 aa. Similar to BP2869, 43.785% identity (43.909% unga [...] |
| BP0780 protein network | https://string-db.org/network/257313.BP0780 | Putative membrane protein; Similar to Pasteurella multocida hypothetical protein Pm1265 TR:Q9CLG9 (EMBL:AE006165) (254 aa) fasta scores: E(): 1.9e-27, 35.628% id in 247 aa, and to Agrobacterium t [...] |
| BP0781 protein network | https://string-db.org/network/257313.BP0781 | Probable ABC transporter, ATP-binding component; Similar to Arthrobacter keyseri transporter ATPase PtrA TR:Q9AGL2 (EMBL:AF331043) (275 aa) fasta scores: E(): 2.6e-35, 48.963% id in 241 aa, and t [...] |
| BP0782 protein network | https://string-db.org/network/257313.BP0782 | Putative exported protein; Similar to Agrobacterium tumefaciens Agr_l_3061p TR:AAK90103 (EMBL:AE008354) (316 aa) fasta scores: E(): 3.6e-08, 27.181% id in 298 aa, and to Rhizobium loti Mll8573 pr [...] |
| BP0783 protein network | https://string-db.org/network/257313.BP0783 | Putative dioxygenase; Similar to Rhizobium loti Mlr0372 protein Mlr0372 TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 0.00021, 24.510% id in 306 aa, and to Agrobacterium tumefaciens Agr_c [...] |
| ilvB protein network | https://string-db.org/network/257313.BP0784 | Similar to Escherichia coli acetolactate synthase isozyme III large subunit IlvI or B0077 SW:ILVI_ECOLI (P00893) (574 aa) fasta scores: E(): 1e-42, 30.515% id in 544 aa, and to Methanococcus aeol [...] |
| BP0785 protein network | https://string-db.org/network/257313.BP0785 | Putative mechanosensitive channel protein; Similar to Rhizobium loti probable integral membrane protein Mlr0973 TR:Q98LL9 (EMBL:AP002996) (410 aa) fasta scores: E(): 1.5e-13, 28.019% id in 207 aa [...] |
| BP0786 protein network | https://string-db.org/network/257313.BP0786 | Transposase for IS481 element. |
| ilvI protein network | https://string-db.org/network/257313.BP0789 | N-terminal region of a putative membrane protein (Pseudogene); 4 probable transmembrane helices predicted for BP0787 by TMHMM2.0 at aa 21-43, 88-110, 117-139 and 154-176. |
| ilvH protein network | https://string-db.org/network/257313.BP0790 | Similar to Escherichia coli acetolactate synthase isozyme III small subunit IlvH or BrnP or B0078 SW:ILVH_ECOLI (P00894) (163 aa) fasta scores: E(): 3.7e-31, 55.828% id in 163 aa, and to Neisseri [...] |
| ilvC protein network | https://string-db.org/network/257313.BP0791 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...] |
| pssA protein network | https://string-db.org/network/257313.BP0792 | Putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein; Similar to Agrobacterium sp31749 phosphatidylserine synthase TR:AAL01116 (EMBL:AF410774) (274 aa) fasta scores: E(): 2.3e-21 [...] |
| BP0793 protein network | https://string-db.org/network/257313.BP0793 | Putative lipoprotein; No significant database matches. |
| rpsO protein network | https://string-db.org/network/257313.BP0794 | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging seve [...] |
| pnp protein network | https://string-db.org/network/257313.BP0795 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. |
| BP0796 protein network | https://string-db.org/network/257313.BP0796 | Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3069 TR:Q9HZD9 (EMBL:AE004731) (205 aa) fasta scores: E(): 3.5e-40, 54.634% id in 205 aa, and to Pseudomonas sp hypo [...] |
| BP0797 protein network | https://string-db.org/network/257313.BP0797 | Transposase for IS481 element. |
| tdcB protein network | https://string-db.org/network/257313.BP0798 | Similar to Escherichia coli threonine dehydratase catabolic TdcB or B3117 or Z4469 or Ecs3997 SW:THD2_ECOLI (P05792) (329 aa) fasta scores: E(): 1.6e-41, 45.246% id in 305 aa, and to Caulobacter [...] |
| BP0799 protein network | https://string-db.org/network/257313.BP0799 | Conserved hypothetical protein; Similar to Sphingomonas aromaticivorans hypothetical 21.4 kDa protein TR:O85864 (EMBL:AF079317) (196 aa) fasta scores: E(): 0.0065, 28.571% id in 161 aa. |
| BP0800 protein network | https://string-db.org/network/257313.BP0800 | Probable zinc-binding dehydrogenase; Similar to Rhizobium loti NADPH quinone oxidoreductase Mll3767 TR:Q98FI0 (EMBL:AP003002) (326 aa) fasta scores: E(): 3e-60, 57.669% id in 326 aa, and to Rhizo [...] |
| tpiA protein network | https://string-db.org/network/257313.BP0801 | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...] |
| secG protein network | https://string-db.org/network/257313.BP0802 | Protein-export membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. |
| betT protein network | https://string-db.org/network/257313.BP0804 | Similar to Escherichia coli high-affinity choline transport protein BetT or B0314 or Z0401 or Ecs0360 SW:BETT_ECOLI (P17447) (677 aa) fasta scores: E(): 2.5e-111, 44.296% id in 675 aa, and to Erw [...] |
| BP0805 protein network | https://string-db.org/network/257313.BP0805 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3174 TR:Q9HZ60 (EMBL:AE004741) (242 aa) fasta scores: E(): 1.4e-13, 31.048% id in 248 aa, and to Rhizobium meliloti putative [...] |
| BP0806 protein network | https://string-db.org/network/257313.BP0806 | Similar to Clostridium tetanomorphum methylaspartate ammonia-lyase SW:MAAL_CLOTT (Q05514) (413 aa) fasta scores: E(): 4.5e-51, 36.520% id in 408 aa, and to Citrobacter amalonaticus 3-methylaspart [...] |
| BP0807 protein network | https://string-db.org/network/257313.BP0807 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-34, 35.737% id in 319 aa, and to Agrobacterium tumefaciens Agr [...] |
| BP0808 protein network | https://string-db.org/network/257313.BP0808 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 TR:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 8e-29, 33.842% id in 393 aa, and to Agrobacterium tumefaciens Agr_l_2924p TR:AA [...] |
| argH protein network | https://string-db.org/network/257313.BP0810 | Putative argininosuccinate lyase (Pseudogene); (C)1 in pertussis; (C)2 in parapertussis. |
| BP0812 protein network | https://string-db.org/network/257313.BP0812 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP0813 protein network | https://string-db.org/network/257313.BP0813 | Similar to Rhizobium loti probable short-chain dehydrogenase/reductase Mlr0808 TR:Q98LZ5 (EMBL:AP002995) (259 aa) fasta scores: E(): 1.2e-30, 45.985% id in 274 aa, and to Rhizobium meliloti putat [...] |
| BP0814 protein network | https://string-db.org/network/257313.BP0814 | Similar to Escherichia coli probable transcriptional regulator LrhA or GenR or B2289 SW:LRHA_ECOLI (P36771) (312 aa) fasta scores: E(): 3.9e-37, 36.396% id in 283 aa, and to Erwinia chrysanthemi [...] |
| metC-2 protein network | https://string-db.org/network/257313.BP0815 | Similar to Escherichia coli cystathionine beta-lyase MetC or B3008 SW:METC_ECOLI (P06721) (395 aa) fasta scores: E(): 1.1e-56, 41.795% id in 390 aa, and to Rhizobium meliloti probable cystathioni [...] |
| BP0816 protein network | https://string-db.org/network/257313.BP0816 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr7142 protein TR:Q987A0 (EMBL:AP003011) (349 aa) fasta scores: E(): 2.1e-12, 26.901% id in 342 aa, and to Rhizobium meliloti hypothetic [...] |
| BP0817 protein network | https://string-db.org/network/257313.BP0817 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.6e-32, 35.474% id in 327 aa, and to Agrob [...] |
| BP0818 protein network | https://string-db.org/network/257313.BP0818 | Conserved hypothetical protein; Similar to Pseudomonas aeruginosa probable thiosulfate sulfurtransferase Pa2603 TR:Q9I0N4 (EMBL:AE004689) (527 aa) fasta scores: E(): 1.4e-45, 40.310% id in 516 aa [...] |
| BP0819 protein network | https://string-db.org/network/257313.BP0819 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.4e-35, 37.037% id in 324 aa, and to Pseud [...] |
| BP0820 protein network | https://string-db.org/network/257313.BP0820 | Conserved hypothetical protein; Similar to Agrobacterium tumefaciens Agr_l_1811p TR:AAK89479 (EMBL:AE008289) (440 aa) fasta scores: E(): 1.4e-42, 32.143% id in 448 aa, and to Rhizobium meliloti p [...] |
| hyuB-2 protein network | https://string-db.org/network/257313.BP0821 | Similar to Pseudomonas sp hydantoin utilization protein B HyuB SW:HYUB_PSESN (Q01263) (592 aa) fasta scores: E(): 4.3e-44, 29.223% id in 592 aa, and to Rhizobium loti hydantoin utilization protei [...] |
| hyuA-2 protein network | https://string-db.org/network/257313.BP0822 | Similar to Pseudomonas sp hydantoin utilization protein A hyuA SW:HYUA_PSESN (Q01262) (690 aa) fasta scores: E(): 1.3e-75, 34.776% id in 693 aa, and to Rhizobium loti hydantoin utilization protei [...] |
| BP0823 protein network | https://string-db.org/network/257313.BP0823 | Putative transcriptional regulator; Similar to Pseudomonas putida pca regulon regulatory protein PcaR SW:PCAR_PSEPU (Q52154) (291 aa) fasta scores: E(): 6e-07, 31.655% id in 139 aa, and to Rhodoc [...] |
| BP0824 protein network | https://string-db.org/network/257313.BP0824 | Azurin; Identical to the previously sequenced Bordetella bronchiseptica azurin SW:AZUR_BORBR (P00278) (129 aa) fasta scores: E(): 4.2e-49, 100.000% id in 129 aa,and similar to Alcaligenes xylosox [...] |
| BP0825 protein network | https://string-db.org/network/257313.BP0825 | Similar to Vibrio cholerae hypothetical protein Vc2666 TR:Q9KNR5 (EMBL:AE004332) (205 aa) fasta scores: E(): 2.1e-30, 43.781% id in 201 aa, and to Bacillus halodurans Bh3429 protein Bh3429 TR:Q9K [...] |
| BP0826 protein network | https://string-db.org/network/257313.BP0826 | Outer membrane component of multidrug efflux system; Similar to Pseudomonas aeruginosa mexE, mexF & oprN genes OprN TR:P95423 (EMBL:X99514) (472 aa) fasta scores: E(): 5e-47, 39.703% id in 471 aa [...] |
| BP0827 protein network | https://string-db.org/network/257313.BP0827 | Integral membrane component of multidrug efflux system; Similar to Pseudomonas aeruginosa probable Rnd efflux transporter Pa4207 TR:Q9HWH4 (EMBL:AE004837) (1029 aa) fasta scores: E(): 0, 69.697% [...] |
| BP0828 protein network | https://string-db.org/network/257313.BP0828 | Probable HlyD-family secretion protein; Similar to Pseudomonas aeruginosa probable Rnd efflux membrane fusion protein precursor Pa4206 TR:Q9HWH5 (EMBL:AE004837) (370 aa) fasta scores: E(): 4.6e-4 [...] |
| BP0829 protein network | https://string-db.org/network/257313.BP0829 | Putative transcriptional regulator; Similar to Streptomyces lipmanii StgU TR:O88133 (EMBL:AJ006517) (210 aa) fasta scores: E(): 7.2e-21, 41.743% id in 218 aa, and to Streptomyces coelicolor hypot [...] |
| BP0830 protein network | https://string-db.org/network/257313.BP0830 | Transposase for IS481 element. |
| betT-2 protein network | https://string-db.org/network/257313.BP0831 | Similar to Escherichia coli high-affinity choline transport protein BetT or B0314 or Z0401 or Ecs0360 SW:BETT_ECOLI (P17447) (677 aa) fasta scores: E(): 2.1e-92, 42.249% id in 658 aa, and to Pseu [...] |
| BP0832 protein network | https://string-db.org/network/257313.BP0832 | Similar to Yersinia pestis hypothetical transcriptional regulator TR:Q9ZC44 (EMBL:AL031866) (320 aa) fasta scores: E(): 3.9e-39, 54.091% id in 220 aa, and to Rhizobium meliloti putative LysR-type [...] |
| BP0834 protein network | https://string-db.org/network/257313.BP0834 | Conserved hypothetical protein (Pseudogene); (CG)3 in pertussis; (CG)4 in parapertussis and bronchiseptica. |
| BP0835 protein network | https://string-db.org/network/257313.BP0835 | Putative membrane protein; Similar to Bacillus megaterium hypothetical 24.9 kDa protein in cytochrome p450meg gene 3'region TR:Q06074 (EMBL:Z21972) (216 aa) fasta scores: E(): 9.7e-13, 31.658% id [...] |
| BP0836 protein network | https://string-db.org/network/257313.BP0836 | Putative exported protein; Similar to Rhizobium meliloti putative oxidoreductase protein Smc01572 TR:CAC46902 (EMBL:AL591790) (155 aa) fasta scores: E(): 0.00047, 32.593% id in 135 aa, and to Rhi [...] |
| BP0837 protein network | https://string-db.org/network/257313.BP0837 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4093 TR:Q9HWT5 (EMBL:AE004825) (138 aa) fasta scores: E(): 1.2e-09, 40.164% id in 122 aa, and to Rhizobium meliloti hypothetical transmemb [...] |
| BP0840 protein network | https://string-db.org/network/257313.BP0840 | Outer membrane porin protein precursor; Forms anion selective channels. |
| nuoA protein network | https://string-db.org/network/257313.BP0841 | Probable NADH-ubiquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor [...] |
| nuoB protein network | https://string-db.org/network/257313.BP0842 | NADH-ubiquinone oxidoreductase, 20 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to pro [...] |
| nuoC protein network | https://string-db.org/network/257313.BP0843 | Respiratory-chain NADH dehydrogenase, 30 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acce [...] |
| nuoD protein network | https://string-db.org/network/257313.BP0844 | Respiratory-chain NADH dehydrogenase, 49 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acce [...] |
| nuoE protein network | https://string-db.org/network/257313.BP0845 | Similar to Rattus norvegicus NADH-ubiquinone oxidoreductase 24 kDa subunit precursor NdufV2 SW:NUHM_RAT (P19234) (241 aa) fasta scores: E(): 3.8e-22, 39.490% id in 157 aa, and to Neisseria mening [...] |
| nuoF protein network | https://string-db.org/network/257313.BP0846 | Respiratory-chain NADH dehydrogenase, 51 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 [...] |
| nuoG protein network | https://string-db.org/network/257313.BP0847 | NADH-ubiquinone oxidoreductase, 75 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to pro [...] |
| nuoH protein network | https://string-db.org/network/257313.BP0848 | NADH-ubiquinone oxidoreductase, chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...] |
| nuoI protein network | https://string-db.org/network/257313.BP0849 | NADH-ubiquinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...] |
| nuoJ protein network | https://string-db.org/network/257313.BP0850 | NADH-ubiquinone oxidoreductase, chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton tra [...] |
| nuoK protein network | https://string-db.org/network/257313.BP0851 | NADH-ubiquinone oxidoreductase, chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...] |
| nuoL protein network | https://string-db.org/network/257313.BP0852 | Similar to Synechococcus sp NADH-plastoquinone oxidoreductase chain 5 NdhF SW:NU5C_SYNP2 (P31971) (664 aa) fasta scores: E(): 3.2e-81, 42.285% id in 674 aa, and to Neisseria meningitidis NADH deh [...] |
| nuoM protein network | https://string-db.org/network/257313.BP0853 | Similar to Marchantia polymorpha NADH-ubiquinone oxidoreductase chain 4 Nd4 or Nad4 SW:NU4M_MARPO (P26848) (495 aa) fasta scores: E(): 1.3e-83, 47.510% id in 482 aa, and to Neisseria meningitidis [...] |
| nuoN protein network | https://string-db.org/network/257313.BP0854 | NADH-ubiquinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the [...] |
| BP0855 protein network | https://string-db.org/network/257313.BP0855 | Putative membrane protein; Similar to Neisseria meningitidis hypothetical inner membrane protein Nma2227 TR:Q9JSL9 (EMBL:AL162758) (116 aa) fasta scores: E(): 4.5e-10, 36.634% id in 101 aa. |
| bfrD protein network | https://string-db.org/network/257313.BP0856 | Probable TonB-dependent receptor for iron transport; Probably involved in iron transport; Belongs to the TonB-dependent receptor family. |
| bfrE protein network | https://string-db.org/network/257313.BP0857 | Probable TonB-dependent receptor for iron transport; Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor PiuA or Fiu or Pa4514 TR:O68590 (EMBL:AF051690) (753 aa) fasta sc [...] |
| BP0858 protein network | https://string-db.org/network/257313.BP0858 | Probable GnaT-family acetyltransferase; Similar to Caulobacter crescentus acetyltransferase, GnaT family Cc1083 TR:Q9A9B1 (EMBL:AE005785) (173 aa) fasta scores: E(): 3.2e-14, 32.530% id in 166 aa [...] |
| FabG-3 protein network | https://string-db.org/network/257313.BP0859 | Short-chain dehydrogenase; Similar to Escherichia coli 7-alpha-hydroxysteroid dehydrogenase HdhA or HsdH or B1619 or X2624 or Ecs2327 SW:HDHA_ECOLI (P25529) (255 aa) fasta scores: E(): 4.6e-23, 3 [...] |
| BP0860 protein network | https://string-db.org/network/257313.BP0860 | Similar to Escherichia coli acetolactate synthase isozyme III large subunit IlvI or b0077 SW:ILVI_ECOLI (P00893) (574 aa) fasta scores: E(): 2e-18, 28.571% id in 532 aa, and to Rhizobium meliloti [...] |
| BP0861 protein network | https://string-db.org/network/257313.BP0861 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.7e-43, 38.889% id in 324 aa, and to Agrobacterium tumefaciens Agr [...] |
| BP0862 protein network | https://string-db.org/network/257313.BP0862 | Probable LysR-family transcriptional regulator; Similar to Salmonella typhimurium OsmT protein OsmT TR:CAC44465 (EMBL:AJ313506) (308 aa) fasta scores: E(): 1.3e-25, 34.354% id in 294 aa, and to R [...] |
| serB protein network | https://string-db.org/network/257313.BP0863 | Similar to Escherichia coli, and phosphoserine phosphatase SerB or B4388 or Z5989 or Ecs5346 SW:SERB_ECOLI (P06862) (322 aa) fasta scores: E(): 2.1e-28, 46.444% id in 239 aa, and to Neisseria men [...] |
| mfd protein network | https://string-db.org/network/257313.BP0864 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...] |
| ispD protein network | https://string-db.org/network/257313.BP0865 | 4-diphosphocytidyl-2c-methyl-D-erythritol synthase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). |
| ispF protein network | https://string-db.org/network/257313.BP0866 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...] |
| BP0867 protein network | https://string-db.org/network/257313.BP0867 | Transposase for IS481 element. |
| fbp protein network | https://string-db.org/network/257313.BP0868 | Fructose-1,6-bisphosphatase; Similar to Escherichia coli fructose-1,6-bisphosphatase Fbp or Fdp or B4232 SW:F16P_ECOLI (P09200) (332 aa) fasta scores: E(): 3.1e-49, 47.273% id in 330 aa, and to P [...] |
| pepN protein network | https://string-db.org/network/257313.BP0869 | Similar to Escherichia coli aminopeptidase N PepN or B0932 SW:AMPN_ECOLI (P04825) (869 aa) fasta scores: E(): 1.6e-65, 47.052% id in 899 aa, and to Caulobacter crescentus aminopeptidase N PepN or [...] |
| BP0870 protein network | https://string-db.org/network/257313.BP0870 | Putative exported protein; Similar to Zymomonas mobilis hypothetical 23.9 kDa protein TR:Q9EZA0 (EMBL:AF300471) (220 aa) fasta scores: E(): 0.00027, 33.333% id in 207 aa. |
| BP0871 protein network | https://string-db.org/network/257313.BP0871 | Transposase for IS481 element. |
| BP0872 protein network | https://string-db.org/network/257313.BP0872 | Similar to Rhizobium loti ATP-binding protein of ABC transporter Mll0815 TR:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 3.1e-156, 74.624% id in 599 aa, and to Agrobacterium tumefaciens Agr [...] |
| tpm protein network | https://string-db.org/network/257313.BP0873 | Similar to Pseudomonas syringae thiopurine S-methyltransferase Tpm SW:TPMT_PSESJ (O86262) (218 aa) fasta scores: E(): 1.1e-35, 44.495% id in 218 aa, and to Pseudomonas aeruginosa thiopurine methy [...] |
| vir-18 protein network | https://string-db.org/network/257313.BP0874 | Vir-repressed protein; Identical to the previously sequenced Bordetella pertussis vir-repressed protein Vir-18 TR:Q04274 (EMBL:M37228) (23 aa) fasta scores: E(): 0.0007, 100.000% id in 23 aa. |
| BP0875 protein network | https://string-db.org/network/257313.BP0875 | Putative exported protein; No significant database matches. |
| BP0876 protein network | https://string-db.org/network/257313.BP0876 | Putative lipoprotein; Similar to Escherichia coli hypothetical lipoprotein YdcL precursor YdcL or B1431 or Z2287 or Ecs2036 SW:YDCL_ECOLI (P76101) (222 aa) fasta scores: E(): 4.1e-13, 30.942% id [...] |
| ycgR protein network | https://string-db.org/network/257313.BP0877 | Conserved hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit [...] |
| BP0878 protein network | https://string-db.org/network/257313.BP0878 | Putative phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. |
| BP0882 protein network | https://string-db.org/network/257313.BP0882 | Putative exported protein (Pseudogene); (GCGCCGGC)3 in pertussis;(GCGCCGGC)2 in parapertussis and bronchiseptica. |
| BP0883 protein network | https://string-db.org/network/257313.BP0883 | Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then th [...] |
| BP0884 protein network | https://string-db.org/network/257313.BP0884 | Probable carboxylase; Similar to Methanococcus jannaschii pyruvate carboxylase subunit B PycB or Mj1231 SW:PYCB_METJA (Q58628) (567 aa) fasta scores: E(): 5.8e-52, 35.685% id in 482 aa, and to Py [...] |
| BP0885 protein network | https://string-db.org/network/257313.BP0885 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr4612 protein Mlr4612 TR:Q98DP4 (EMBL:AP003004) (122 aa) fasta scores: E(): 3, 29.487% id in 78 aa. |
| BP0886 protein network | https://string-db.org/network/257313.BP0886 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein Mt2360 TR:AAK46645 (EMBL:AE007078) (307 aa) fasta scores: E(): 2e-09, 25.498% id in 25 [...] |
| BP0887 protein network | https://string-db.org/network/257313.BP0887 | Conserved hypothetical protein; Similar to Arabidopsis thaliana induced upon wounding stress TR:Q39171 (EMBL:X99793) (386 aa) fasta scores: E(): 9.1e-20, 30.458% id in 371 aa, and to Arabidopsis [...] |
| BP0888 protein network | https://string-db.org/network/257313.BP0888 | Similar to Bacillus subtilis hypothetical transcriptional regulator YurK SW:YURK_BACSU (O32152) (242 aa) fasta scores: E(): 2.1e-15, 30.472% id in 233 aa, and to Deinococcus radiodurans transcrip [...] |
| accC protein network | https://string-db.org/network/257313.BP0889 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarbox [...] |
| BP0891 protein network | https://string-db.org/network/257313.BP0891 | Putative acyl-CoA carboxylase (Pseudogene); Inverted repeat for IS481 element. |
| BP0892 protein network | https://string-db.org/network/257313.BP0892 | Hypothetical protein; No significant database matches. |
| BP0893 protein network | https://string-db.org/network/257313.BP0893 | Hypothetical protein; No significant database matches. |
| pmi protein network | https://string-db.org/network/257313.BP0894 | Similar to Rhizobium meliloti mannose-6-phosphate isomerase Pmi or R02982 or Smc03111 SW:MANA_RHIME (P29954) (387 aa) fasta scores: E(): 4.5, 27.763% id in 389 aa, and to Caulobacter crescentus m [...] |
| BP0895 protein network | https://string-db.org/network/257313.BP0895 | Conserved hypothetical protein; Similar to Halobacterium sp 50S ribosomal protein l44E Rpl44e or Vng0551G TR:Q9HRT6 (EMBL:AE005006) (61 aa) fasta scores: E(): 8.8, 39.024% id in 41 aa. |
| BP0896 protein network | https://string-db.org/network/257313.BP0896 | Hypothetical protein; No significant database matches. |
| BP0897 protein network | https://string-db.org/network/257313.BP0897 | Transposase for IS481 element. |
| BP0898 protein network | https://string-db.org/network/257313.BP0898 | Putative ferredoxin; Similar to Pseudomonas spCA10 ferredoxin component of carbazole 1,9a-dioxygenase CaraC TR:O32475 (EMBL:D89064) (107 aa) fasta scores: E(): 0.16, 28.736% id in 87 aa, and to P [...] |
| BP0899 protein network | https://string-db.org/network/257313.BP0899 | Similar to Rhizobium loti ABC transporter, ATP-binding protein Mlr7818 TR:Q984W3 (EMBL:AP003012) (627 aa) fasta scores: E(): 1.9e-115, 56.324% id in 593 aa, and to Rhizobium meliloti probable ABC [...] |
| BP0900 protein network | https://string-db.org/network/257313.BP0900 | Probable oxidoreductase; Similar to Corynebacterium SP 2,5-diketo-D-gluconic acid reductase TR:P06632 (EMBL:M12799) (278 aa) fasta scores: E(): 5.9e-54, 53.008% id in 266 aa, and to Streptomyces [...] |
| BP0901 protein network | https://string-db.org/network/257313.BP0901 | Similar to Streptomyces coelicolor putative aldo/keto reductase Scf81.28C TR:Q9RJC4 (EMBL:AL133171) (307 aa) fasta scores: E(): 6.4e-83, 66.667% id in 309 aa, and to Escherichia coli hypothetical [...] |
| BP0902 protein network | https://string-db.org/network/257313.BP0902 | Putative membrane protein; Similar to Caulobacter crescentus hypothetical protein Cc2926 TR:Q9A4B1 (EMBL:AE005957) (70 aa) fasta scores: E(): 0.0073, 44.231% id in 52 aa. |
| BP0903 protein network | https://string-db.org/network/257313.BP0903 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1909 TR:Q9I2J5 (EMBL:AE004617) (383 aa) fasta scores: E(): 1.4e-72, 52.910% id in 378 aa, and to Caulobacter cr [...] |
| pphA protein network | https://string-db.org/network/257313.BP0904 | Similar to Escherichia coli serine/threonine protein phosphatase 1 PphA or PrpA or B1838 SW:PRP1_ECOLI (P55798) (218 aa) fasta scores: E(): 1.9e-18, 34.821% id in 224 aa, and to Bacteriophage lam [...] |
| mrcA protein network | https://string-db.org/network/257313.BP0905 | Similar to Escherichia coli penicillin-binding protein 1A MrcA or PonA or B3396 SW:PBPA_ECOLI (P02918) (850 aa) fasta scores: E(): 2.1e-61, 37.243% id in 827 aa, and to Pseudomonas aeruginosa pen [...] |
| BP0906 protein network | https://string-db.org/network/257313.BP0906 | Putative peptidase; Similar to Rickettsia conorii acylamino-acid-releasing enzyme Rc0603 TR:AAL03141 (EMBL:AE008621) (676 aa) fasta scores: E(): 2.3e-62, 34.783% id in 621 aa, and to Caulobacter [...] |
| BP0908 protein network | https://string-db.org/network/257313.BP0908 | Putative lipoprotein (Pseudogene); (TC)2 in pertussis; (TC)1 in parapertussis and bronchiseptica. |
| dinP protein network | https://string-db.org/network/257313.BP0909 | DNA-damage-inducible protein p; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from misma [...] |
| BP0910 protein network | https://string-db.org/network/257313.BP0910 | Transposase for IS481 element. |
| BP0911 protein network | https://string-db.org/network/257313.BP0911 | N-terminal region of a putative decarboxylase (pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481. No significant database matches. |
| BP0913 protein network | https://string-db.org/network/257313.BP0913 | LysR-family transcriptional regulator (Pseudogene); (GC)2 in pertussis; (GC)3 in parapertussis and bronchiseptica. |
| BP0914 protein network | https://string-db.org/network/257313.BP0914 | Probable inner membrane component of binding-protein-dependent transport system; Similar to Escherichia coli taurine transport system permease protein TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) [...] |
| BP0915 protein network | https://string-db.org/network/257313.BP0915 | Probable inner membrane component of binding-protein-dependent transport system; Similar to Escherichia coli taurine transport system permease protein TauC or SsiC or B0367 SW:TAUC_ECOLI (Q47539) [...] |
| BP0918 protein network | https://string-db.org/network/257313.BP0918 | Putative ATP-binding protein of a transporter (Pseudogene); TGA in-frame stop codon in pertussis; GGA in parapertussis and bronchiseptica. |
| gabD-2 protein network | https://string-db.org/network/257313.BP0919 | Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 1.3e-46, 35.532% id in 470 aa, and to Bacillus halodurans [...] |
| BP0920 protein network | https://string-db.org/network/257313.BP0920 | Putative exported protein; Similar to Salmonella typhi hypothetical protein R0146 TR:Q9L5J6 (EMBL:AF250878) (467 aa) fasta scores: E(): 4.6e-137, 73.176% id in 466 aa. |
| citB protein network | https://string-db.org/network/257313.BP0921 | Similar to Escherichia coli citrate utilization protein B CitB SW:CIT2_ECOLI (P05853) (379 aa) fasta scores: E(): 2.6e-91, 60.743% id in 377 aa, and to Salmonella typhi putative citrate utilisati [...] |
| BP0922 protein network | https://string-db.org/network/257313.BP0922 | Similar to Bacillus subtilis hypothetical 39.5 kDa protein in sigZ-csn intergenic region YraM SW:YRAM_BACSU (O07931) (367 aa) fasta scores: E(): 3.4e-41, 38.462% id in 364 aa, and to Vibrio chole [...] |
| BP0923 protein network | https://string-db.org/network/257313.BP0923 | Similar to Methanococcus jannaschii hypothetical protein Mj0255 SW:Y255_METJA (Q57703) (251 aa) fasta scores: E(): 2.6e-16, 32.500% id in 240 aa, and to Methanothermobacter thermautotrophicus con [...] |
| BP0924 protein network | https://string-db.org/network/257313.BP0924 | Putative transcriptional regulator; Similar to Klebsiella oxytoca CymJ TR:Q48400 (EMBL:X86014) (268 aa) fasta scores: E(): 5.8e-10, 24.895% id in 237 aa, and to Bacillus subtilis YrhO TR:O05405 ( [...] |
| BP0925 protein network | https://string-db.org/network/257313.BP0925 | Putative fumarylacetoacetate-family hydrolase; Similar to Homo sapiens unknown TR:AAH09403 (EMBL:BC009403) (314 aa) fasta scores: E(): 1.5e-30, 41.702% id in 235 aa, and to naphthalenesulfonate-d [...] |
| BP0926 protein network | https://string-db.org/network/257313.BP0926 | Similar to Pseudomonas aeruginosa hypothetical protein Pa1213 TR:Q9I4C5 (EMBL:AE004551) (319 aa) fasta scores: E(): 2.2e-14, 30.556% id in 288 aa. |
| BP0927 protein network | https://string-db.org/network/257313.BP0927 | Putative exported protein; Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 2.6e-40, 36.977% id in 311 aa, and to Rhizobium meliloti conserved [...] |
| BP0928 protein network | https://string-db.org/network/257313.BP0928 | Similar to alpha proteobacterium Y3F LysR-type transcriptional regulator PcaQ TR:Q9L5A8 (EMBL:AF253466) (308 aa) fasta scores: E(): 5.8e-19, 30.293% id in 307 aa, and to Pseudomonas aeruginosa pr [...] |
| BP0929 protein network | https://string-db.org/network/257313.BP0929 | Putative membrane protein; Similar to Helicobacter pylori J99 putative Jhp0345 TR:Q9ZM77 (EMBL:AE001470) (189 aa) fasta scores: E(): 0.02, 22.527% id in 182 aa, and to Streptomyces coelicolor put [...] |
| BP0930 protein network | https://string-db.org/network/257313.BP0930 | Putative CoA ligase; Similar to Pseudomonas diterpeniphila coenzyme A ligase TdtL TR:AAK95584 (EMBL:AF274704) (543 aa) fasta scores: E(): 7.2e-54, 33.333% id in 546 aa, and to Escherichia coli pr [...] |
| BP0931 protein network | https://string-db.org/network/257313.BP0931 | Putative exported protein; Similar to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 5.3e-24, 33.779% id in 299 aa, and to Comamonas te [...] |
| BP0932 protein network | https://string-db.org/network/257313.BP0932 | Conserved hypothetical protein; Similar to Methanothermobacter thermautotrophicus conserved protein Mth1398 TR:O27449 (EMBL:AE000902) (133 aa) fasta scores: E(): 1.1e-07, 35.398% id in 113 aa, an [...] |
| BP0934 protein network | https://string-db.org/network/257313.BP0934 | Conserved hypothetical protein (Pseudogene); TCTG in pertussis; (-) deleted in parapertussis and bronchiseptica. |
| BP0935 protein network | https://string-db.org/network/257313.BP0935 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-39, 39.264% id in 326 aa, and to Agrobacterium tumefaciens Agr_l [...] |
| BP0936 protein network | https://string-db.org/network/257313.BP0936 | LysR-family transcriptional regulator; Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR or Cc3045 SW:ILVR_CAUCR (P52670) (296 aa) fasta scores: E(): 1.2e-2 [...] |
| BP0937 protein network | https://string-db.org/network/257313.BP0937 | Phage-related protein; Similar to Bacteriophage HP1 hypothetical 14.9 kDa protein in rep-hol intergenic region SW:YO14_BPHP1 (P51716) (133 aa) fasta scores: E(): 5.6e-11, 37.795% id in 127 aa, an [...] |
| BP0938 protein network | https://string-db.org/network/257313.BP0938 | Transposase for IS481 element. |
| BP0939 protein network | https://string-db.org/network/257313.BP0939 | Conserved hypothetical protein; Similar to Rhizobium loti Msr2149 protein Msr2149 TR:Q98J18 (EMBL:AP002999) (62 aa) fasta scores: E(): 2.3e-09, 51.667% id in 60 aa, and to Rhizobium meliloti hypo [...] |
| BP0940 protein network | https://string-db.org/network/257313.BP0940 | Similar to Erwinia chrysanthemi sugar efflux transpoter SotB TR:Q9S3J9 (EMBL:AJ249181) (395 aa) fasta scores: E(): 1.7e-30, 31.967% id in 366 aa, and to Pseudomonas aeruginosa probable Mfs transp [...] |
| BP0941 protein network | https://string-db.org/network/257313.BP0941 | Similar to Alcaligenes eutrophus phosphoglycolate phosphatase, chromosomal CbbzC SW:GPHC_ALCEU (P40852) (231 aa) fasta scores: E(): 2.9e-17, 36.316% id in 190 aa, and to Neisseria meningitidis pu [...] |
| ubiG protein network | https://string-db.org/network/257313.BP0942 | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG [...] |
| ompA protein network | https://string-db.org/network/257313.BP0943 | Highly similar to Bordetella avium outer membrane protein A precursor OmpA SW:OMPA_BORAV (Q05146) (194 aa) fasta scores: E(): 5.7e-67, 91.753% id in 194 aa, and to Bordetella petrii OmpA protein [...] |
| gyrA protein network | https://string-db.org/network/257313.BP0944 | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...] |
| serC protein network | https://string-db.org/network/257313.BP0945 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belon [...] |
| pheA protein network | https://string-db.org/network/257313.BP0946 | Similar to Escherichia coli P-protein [includes: chorismate mutase and prephenate dehydratase] PheA or B2599 or Z3891 or Ecs3462 SW:PHEA_ECOLI (P07022) (386 aa) fasta scores: E(): 4.9e-27, 33.773 [...] |
| tyrA protein network | https://string-db.org/network/257313.BP0947 | Similar to Bordetella bronchiseptica prephenate dehydrogenase TyrA TR:Q9RND8 (EMBL:AF182427) (299 aa) fasta scores: E(): 4.1e-108, 99.331% id in 299 aa, and to Rhizobium meliloti putative cyclohe [...] |
| aroA protein network | https://string-db.org/network/257313.BP0948 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...] |
| cmk protein network | https://string-db.org/network/257313.BP0949 | Cytidylate kinase; Similar to Escherichia coli cytidylate kinase Cmk or MssA or B0910 or Z1256 or Ecs0993 SW:KCY_ECOLI (P23863) (227 aa) fasta scores: E(): 8.1e-40, 57.674% id in 215 aa, and iden [...] |
| rpsA protein network | https://string-db.org/network/257313.BP0950 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. |
| ihfB protein network | https://string-db.org/network/257313.BP0951 | Integration host factor beta-subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tran [...] |
| BP0952 protein network | https://string-db.org/network/257313.BP0952 | Putative membrane protein; Similar to Neisseria meningitidis putative inner membrane hypothetical protein Nma2149 TR:Q9JST1 (EMBL:AL162758) (104 aa) fasta scores: E(): 0.0012, 33.981% id in 103 a [...] |
| lapB protein network | https://string-db.org/network/257313.BP0953 | Putative membrane protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH [...] |
| rfaE protein network | https://string-db.org/network/257313.BP0954 | ADP-heptose synthase; Similar to Salmonella typhimurium ADP-heptose synthase RfaE TR:Q9AJ74 (EMBL:AF155126) (477 aa) fasta scores: E(): 7.1e-50, 52.508% id in 299 aa, and to Burkholderia pseudoma [...] |
| rfaD protein network | https://string-db.org/network/257313.BP0955 | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the [...] |
| BP0956 protein network | https://string-db.org/network/257313.BP0956 | Conserved hypothetical protein; Similar to Neisseria gonorrhoeae ComE TR:Q9EU10 (EMBL:AF268317) (99 aa) fasta scores: E(): 0.0033, 35.714% id in 84 aa, and to Xylella fastidiosa hypothetical prot [...] |
| BP0957 protein network | https://string-db.org/network/257313.BP0957 | Transposase for IS481 element. |
| cysM protein network | https://string-db.org/network/257313.BP0958 | Cysteine synthase B; Similar to Escherichia coli cysteine synthase B CysM or B2421 SW:CYSM_ECOLI (P16703) (303 aa) fasta scores: E(): 7.7e-67, 64.407% id in 295 aa, and to Pseudomonas aeruginosa [...] |
| mltB protein network | https://string-db.org/network/257313.BP0959 | Similar to Escherichia coli membrane-bound lytic murein transglycosylase B precursor MltB or B2701 SW:MLTB_ECOLI (P41052) (361 aa) fasta scores: E(): 4.8e-28, 35.696% id in 381 aa, and to Pseudom [...] |
| BP0960 protein network | https://string-db.org/network/257313.BP0960 | Similar to Neisseria meningitidis histone deacetylase family protein Nmb0605 TR:Q9K0J2 (EMBL:AE002416) (369 aa) fasta scores: E(): 2.4e-50, 44.156% id in 308 aa, and to Rhizobium meliloti conserv [...] |
| etfB protein network | https://string-db.org/network/257313.BP0961 | Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit EtfB or EtfS SW:ETFB_BRAJA (P53575) (249 aa) fasta scores: E(): 9.4e-59, 69.076% id in 249 aa, and to Pseudomonas a [...] |
| etfA protein network | https://string-db.org/network/257313.BP0962 | Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SW:ETFA_BRAJA (P53573) (314 aa) fasta scores: E(): 4.3e-64, 68.065% id in 310 aa, and to Pseudomonas [...] |
| BP0964 protein network | https://string-db.org/network/257313.BP0964 | Similar to Rhizobium loti probable acyl-CoA dehydrogenase Mlr6975 TR:Q987P3 (EMBL:AP003010) (583 aa) fasta scores: E(): 2.9e-96, 50.984% id in 610 aa, and to Rhizobium meliloti putative acyl-CoA [...] |
| BP0965 protein network | https://string-db.org/network/257313.BP0965 | Similar to Mus musculus antioxidant protein 2 Aop2 or Ltw4 or Prdx5 SW:AOP2_MOUSE (O08709) (223 aa) fasta scores: E(): 1.3e-42, 55.605% id in 223 aa, and to Pseudomonas aeruginosa probable antiox [...] |
| sbp protein network | https://string-db.org/network/257313.BP0966 | Similar to Escherichia coli sulfate-binding protein precursor Sbp or B3917 SW:SUBI_ECOLI (P06997) (329 aa) fasta scores: E(): 3.5e-85, 67.732% id in 313 aa, and to Enterobacter cloacae putative s [...] |
| cysA protein network | https://string-db.org/network/257313.BP0969 | Sulfate transport system permease protein (Pseudogene); Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system [...] |
| cysD protein network | https://string-db.org/network/257313.BP0970A | Phosphoadenosine phosphosulfate reductase (Pseudogene); (C)1 in pertussis; (C)2 in parapertussis and bronchiseptica. |
| cysN protein network | https://string-db.org/network/257313.BP0972 | Sulfate adenylyltransferase subunit 1 (Pseudogene); 57 bp deletion in pertussis relative to parapertussis and bronchiseptica following this codon. |
| BP0973 protein network | https://string-db.org/network/257313.BP0973 | Putative membrane protein; No significant database matches. |
| BP0974 protein network | https://string-db.org/network/257313.BP0974 | Putative membrane protein; Similar to Streptomyces coelicolor putative integral membrane protein Sce87.15C TR:Q9RKC3 (EMBL:AL132674) (281 aa) fasta scores: E(): 4.3e-14, 29.537% id in 281 aa, and [...] |
| rplS protein network | https://string-db.org/network/257313.BP0975 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. |
| BP0976 protein network | https://string-db.org/network/257313.BP0976 | Conserved hypothetical protein; Similar to Caulobacter crescentus MutT/NudiX family protein Cc0407 TR:Q9AB27 (EMBL:AE005713) (216 aa) fasta scores: E(): 6.1e-27, 47.959% id in 196 aa, and to Rhiz [...] |
| BP0977 protein network | https://string-db.org/network/257313.BP0977 | Similar to Pseudomonas aeruginosa probable oxidoreductase Pa4434 TR:Q9HVY1 (EMBL:AE004857) (345 aa) fasta scores: E(): 1.1e-83, 61.318% id in 349 aa, and to Vibrio cholerae oxidoreductase Tas, al [...] |
| BP0978 protein network | https://string-db.org/network/257313.BP0978 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| ubiC protein network | https://string-db.org/network/257313.BP0981 | Conserved hypothetical protein (Pseudogene); Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; [...] |
| BP0982 protein network | https://string-db.org/network/257313.BP0982 | Similar to Caulobacter crescentus RNA pseudouridylate synthase, putative Cc0855 TR:Q9A9V6 (EMBL:AE005762) (255 aa) fasta scores: E(): 5.2e-38, 49.587% id in 242 aa, and to Neisseria meningitidis [...] |
| BP0983 protein network | https://string-db.org/network/257313.BP0983 | Similar to Rhizobium meliloti putative LysR-family transcriptional regulator Sma1602 TR:AAK65531 (EMBL:AE007274) (302 aa) fasta scores: E(): 3.4e-51, 51.020% id in 294 aa, and to Pseudomonas aeru [...] |
| acrB protein network | https://string-db.org/network/257313.BP0985 | Acriflavine resistance protein a precursor (Pseudogene); Large deletion in pertussis relative to parapertussis and bronchiseptica following this codon. |
| cusC protein network | https://string-db.org/network/257313.BP0986 | Similar to Escherichia coli probable outer membrane lipoprotein CusC precursor CusC or IbeB or B0572 SW:CUSC_ECOLI (P77211) (457 aa) fasta scores: E(): 4.9e-38, 39.655% id in 464 aa, and to Pseud [...] |
| BP0987 protein network | https://string-db.org/network/257313.BP0987 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical protein Sma1766 TR:AAK65633 (EMBL:AE007284) (83 aa) fasta scores: E(): 3.7e-12, 52.439% id in 82 aa, and to Pseudomonas aerug [...] |
| BP0988 protein network | https://string-db.org/network/257313.BP0988 | Putative exported protein; Similar to Neisseria meningitidis putative lipoprotein Nma1767 TR:Q9JTI0 (EMBL:AL162757) (217 aa) fasta scores: E(): 1.6e-19, 39.490% id in 157 aa, and to Caulobacter c [...] |
| prlC protein network | https://string-db.org/network/257313.BP0989 | Similar to Escherichia coli oligopeptidase A PrlC or OpdA or B3498 SW:OPDA_ECOLI (P27298) (680 aa) fasta scores: E(): 7.2e-123, 46.009% id in 689 aa, and to Xylella fastidiosa oligopeptidase A Xf [...] |
| folD protein network | https://string-db.org/network/257313.BP0990 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10 [...] |
| BP0991 protein network | https://string-db.org/network/257313.BP0991 | Two-component response regulator; Similar to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SW:FIXJ_BRAJA (P23221) (205 aa) fasta scores: E(): 3e-26, 41.146% id in 192 aa, and t [...] |
| BP0992 protein network | https://string-db.org/network/257313.BP0992 | Tw-component sensor kinase; Similar to Azorhizobium caulinodans sensor protein FixL SW:FIXL_AZOCA (P26489) (504 aa) fasta scores: E(): 1.7e-37, 47.893% id in 261 aa, and to Caulobacter crescentus [...] |
| aceE protein network | https://string-db.org/network/257313.BP0993 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| aceF protein network | https://string-db.org/network/257313.BP0994 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| lpdA-2 protein network | https://string-db.org/network/257313.BP0995 | Similar to Escherichia coli dihydrolipoamide dehydrogenase LpdA or Lpd or B0116 or Z0126 or ecs0120 SW:DLDH_ECOLI (P00391) (473 aa) fasta scores: E(): 7.8e-97, 63.713% id in 474 aa, and to Alcali [...] |
| flaA protein network | https://string-db.org/network/257313.BP0996 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. |
| BP0997 protein network | https://string-db.org/network/257313.BP0997 | Transposase for IS481 element. |
| BP0998 protein network | https://string-db.org/network/257313.BP0998 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. |
| tktA protein network | https://string-db.org/network/257313.BP0999 | Transketolase 1; Similar to Escherichia coli transketolase 1 TktA or Tkt or B2935 SW:TKT1_ECOLI (P27302) (663 aa) fasta scores: E(): 5.7e-137, 63.433% id in 670 aa, and to Pasteurella multocida t [...] |
| gap protein network | https://string-db.org/network/257313.BP1000 | Similar to Pseudomonas aeruginosa glyceraldehyde 3-phosphate dehydrogenase Gap or HexC or pa3195 SWALL:G3P_PSEAE (SWALL:P27726) (334 aa) fasta scores: E(): 9.1e-84, 66.07% id in 336 aa, and to Al [...] |
| pgk protein network | https://string-db.org/network/257313.BP1001 | Similar to Escherichia coli phosphoglycerate kinase Pgk or B2926 SW:PGK_ECOLI (P11665) (386 aa) fasta scores: E(): 6.3e-83, 64.042% id in 381 aa, and to Alcaligenes eutrophus phosphoglycerate kin [...] |
| fabI protein network | https://string-db.org/network/257313.BP1002 | Similar to Escherichia coli, and enoyl-[acyl-carrier-protein] reductase [NADH] FabI or EnvM or B1288 or Z2512 or Ecs1861 SW:FABI_ECOLI (P29132) (261 aa) fasta scores: E(): 1.1e-35, 41.200% id in [...] |
| ackA protein network | https://string-db.org/network/257313.BP1003 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. |
| BP1004 protein network | https://string-db.org/network/257313.BP1004 | Similar to Clostridium beijerinckii phosphate butyryltransferase Ptb SW:PTB_CLOBE (Q05624) (302 aa) fasta scores: E(): 2.3e-39, 40.339% id in 295 aa, and to Rhizobium meliloti phosphate acetyltra [...] |
| BP1005 protein network | https://string-db.org/network/257313.BP1005 | Similar to Rhizobium meliloti hypothetical 80.6 kDa protein in ackA 5'region SW:YACK_RHIME (Q9X447) (733 aa) fasta scores: E(): 4.3e-155, 56.428% id in 739 aa. |
| BP1006 protein network | https://string-db.org/network/257313.BP1006 | Probable glutathione S-transferase; Similar to Escherichia coli hypothetical Gst-like protein YfcF or B2301 SW:YFCF_ECOLI (P77544) (214 aa) fasta scores: E(): 1e-33, 52.683% id in 205 aa, and to [...] |
| BP1009 protein network | https://string-db.org/network/257313.BP1009 | Transposase (Pseudogene); HMMPfam hit to PF00665, Integrase core domain. |
| BP1010 protein network | https://string-db.org/network/257313.BP1010 | Putative acetyltransferase; Similar to Synechocystis sp hypothetical 19.4 kDa protein Slr1340 TR:P74076 (EMBL:D90912) (178 aa) fasta scores: E(): 9.8e-35, 55.346% id in 159 aa, and to Anabaena sp [...] |
| cbpA protein network | https://string-db.org/network/257313.BP1011 | Similar to Escherichia coli curved DNA-binding protein CbpA or B1000 SW:CBPA_ECOLI (P36659) (306 aa) fasta scores: E(): 2.9e-26, 41.772% id in 316 aa, and to Caulobacter crescentus DnaJ family pr [...] |
| BP1012 protein network | https://string-db.org/network/257313.BP1012 | Conserved hypothetical protein; Similar to Thermus thermophilus dnaK operon DafA TR:P77527 (EMBL:Y07826) (78 aa) fasta scores: E(): 0.93, 38.776% id in 49 aa, and to Rhizobium meliloti hypothetic [...] |
| pitA protein network | https://string-db.org/network/257313.BP1014 | Putative membrane protein (pseudogene); 8 probable transmembrane helices predicted for BP1013 by TMHMM2.0 at aa 24-46, 51-73, 77-99, 139-161, 171-188, 200-222, 247-269 and 290-312. |
| mog protein network | https://string-db.org/network/257313.BP1015 | Similar to Escherichia coli molybdopterin biosynthesis Mog protein Mog or MogA or ChlG or B0009 or Z0009 or Ecs0009 SW:MOG_ECOLI (P28694) (195 aa) fasta scores: E(): 4e-47, 68.557% id in 194 aa, [...] |
| BP1016 protein network | https://string-db.org/network/257313.BP1016 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa2759 TR:Q9I084 (EMBL:AE004704) (104 aa) fasta scores: E(): 1.1, 27.027% id in 111 aa. |
| BP1017 protein network | https://string-db.org/network/257313.BP1017 | Putative peptidase; Similar to Pseudomonas aeruginosa hypothetical protein Pa3787 TR:Q9HXK8 (EMBL:AE004797) (282 aa) fasta scores: E(): 1.9e-72, 68.978% id in 274 aa, and to Xylella fastidiosa hy [...] |
| BP1018 protein network | https://string-db.org/network/257313.BP1018 | Hypothetical protein; No significant database matches. |
| infA protein network | https://string-db.org/network/257313.BP1019 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...] |
| BP1020 protein network | https://string-db.org/network/257313.BP1020 | Transposase for IS481 element. |
| fliA protein network | https://string-db.org/network/257313.BP1021 | RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma [...] |
| flhD protein network | https://string-db.org/network/257313.BP1022 | Flagellar transcriptional activator FlbB; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by bind [...] |
| flhC protein network | https://string-db.org/network/257313.BP1023 | Flagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by bind [...] |
| motA protein network | https://string-db.org/network/257313.BP1024 | Similar to Escherichia coli chemotaxis MotA protein MotA or B1890 SW:MOTA_ECOLI (P09348) (295 aa) fasta scores: E(): 2.9e-60, 55.439% id in 285 aa, and to Salmonella typhimurium chemotaxis MotA p [...] |
| motB protein network | https://string-db.org/network/257313.BP1025 | Similar to Escherichia coli chemotaxis MotB protein MotB or B1889 or Z2943 or Ecs2599 SW:MOTB_ECOLI (P09349) (308 aa) fasta scores: E(): 8.5e-54, 57.500% id in 280 aa, and to Salmonella typhimuri [...] |
| cheA protein network | https://string-db.org/network/257313.BP1028 | Chemotaxis protein CheY (Pseudogene); HMMPfam hit to PF00072, Response regulator receiver domain. |
| cheW protein network | https://string-db.org/network/257313.BP1029 | Similar to Escherichia coli chemotaxis protein CheW or B1887 or Z2941 or Ecs2597 SW:CHEW_ECOLI (P07365) (167 aa) fasta scores: E(): 1.3e-41, 74.83% id in 155 aa, and to Burkholderia pseudomallei [...] |
| tsr protein network | https://string-db.org/network/257313.BP1030 | Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 3e-64, 46.71% id in 533 aa, and to Salmonella typhimurium [...] |
| cheB protein network | https://string-db.org/network/257313.BP1032 | Chemotaxis protein methyltransferase (Pseudogene); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the [...] |
| cheY protein network | https://string-db.org/network/257313.BP1033 | Similar to Escherichia coli chemotaxis protein CheY or B1882 or Z2936 or Ecs2592 TR:AAG56872 (EMBL:K02175) (129 aa) fasta scores: E(): 5.1e-36, 78.73% id in 127 aa, and to Burkholderia pseudomall [...] |
| cheZ protein network | https://string-db.org/network/257313.BP1034 | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). |
| BP1035 protein network | https://string-db.org/network/257313.BP1035 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP1036 protein network | https://string-db.org/network/257313.BP1036 | Putative aldo/keto reductase; Similar to Rhizobium meliloti putative aldoketo reductase protein Smb20500 TR:CAC48882 (EMBL:AL603643) (331 aa) fasta scores: E(): 7.8e-35, 39.26% id in 326 aa, and [...] |
| corC protein network | https://string-db.org/network/257313.BP1038 | Putative apolipoprotein N-acyltransferase (Pseudogene); A in pertussis; (-) deleted in parapertussis and bronchiseptica. |
| ybeY protein network | https://string-db.org/network/257313.BP1039 | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. |
| BP1040 protein network | https://string-db.org/network/257313.BP1040 | PhoH-like protein; Similar to Escherichia coli PhoH-like protein YbeZ or B0660 or Z0809 or Ecs0698 SW:PHOL_ECOLI (P77349) (359 aa) fasta scores: E(): 2.6e-60, 54.74% id in 316 aa, and to Salmonel [...] |
| miaB protein network | https://string-db.org/network/257313.BP1041 | Conserved hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at positi [...] |
| BP1044 protein network | https://string-db.org/network/257313.BP1044 | Putative membrane protein (Pseudogene); Insertion sequence. |
| secF protein network | https://string-db.org/network/257313.BP1045 | Protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein [...] |
| secD protein network | https://string-db.org/network/257313.BP1046 | Protein-export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein [...] |
| yajC protein network | https://string-db.org/network/257313.BP1047 | Putative secreted protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and [...] |
| BP1048 protein network | https://string-db.org/network/257313.BP1048 | Transposase for IS481 element. |
| tgt protein network | https://string-db.org/network/257313.BP1049 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...] |
| queA protein network | https://string-db.org/network/257313.BP1050 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...] |
| BP1051 protein network | https://string-db.org/network/257313.BP1051 | Probable D-alanyl-D-alanine carboxypeptidase; Similar to Escherichia coli penicillin-binding protein 4 precursor DacB or B3182 SW:PBP4_ECOLI (P24228) (477 aa) fasta scores: E(): 2.5e-21, 29.19% i [...] |
| upp protein network | https://string-db.org/network/257313.BP1052 | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. |
| BP1053 protein network | https://string-db.org/network/257313.BP1053 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| prn protein network | https://string-db.org/network/257313.BP1054 | Pertactin precursor; Agglutinogen that binds to eukaryotic cells; a process mediated by the R-G-D sequence. Pertactin may have a role in bacterial adhesion, and thus play a role in virulence. May [...] |
| cysG protein network | https://string-db.org/network/257313.BP1055 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the [...] |
| BP1056 protein network | https://string-db.org/network/257313.BP1056 | Putative membrane protein; Weakly similar to Bacteriophage Mx8 p64 TR:AAK94399 (EMBL:AF396866) (357 aa) fasta scores: E(): 6.6, 25.54% id in 137 aa. |
| BP1057 protein network | https://string-db.org/network/257313.BP1057 | Putative membrane protein; Similar to Escherichia coli ElaB protein ElaB or B2266 or Z3526 or Ecs3154 SW:ELAB_ECOLI (P52084) (101 aa) fasta scores: E(): 1.1e-06, 35.86% id in 92 aa, and to Pseudo [...] |
| BP1058 protein network | https://string-db.org/network/257313.BP1058 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3041 TR:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 0.00021, 34.48% id in 116 aa. |
| BP1059 protein network | https://string-db.org/network/257313.BP1059 | Hypothetical protein; Weakly similar to Synechocystis sp hypothetical 23.9 kDa protein Slr1949 TR:P74511 (EMBL:D90915) (212 aa) fasta scores: E(): 8.6, 22.85% id in 140 aa. |
| ubiD protein network | https://string-db.org/network/257313.BP1060 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. |
| BP1061 protein network | https://string-db.org/network/257313.BP1061 | Similar to Neisseria meningitidis putative transglycosylase Nma1674 TR:Q9JTQ7 (EMBL:AL162756) (207 aa) fasta scores: E(): 0.017, 30.05% id in 193 aa, and to Caulobacter crescentus transglycosylas [...] |
| BP1062 protein network | https://string-db.org/network/257313.BP1062 | Probable aminotransferase; Similar to Thermus aquaticus aspartate aminotransferase AspC SW:AAT_THETH (Q56232) (385 aa) fasta scores: E(): 9.9e-32, 34.27% id in 388 aa, and to Pseudomonas aerugino [...] |
| BP1063 protein network | https://string-db.org/network/257313.BP1063 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 27.6 kDa protein Rv1249c or Mtv006.21C TR:O50464 (EMBL:AL021006) (262 aa) fasta scores: E(): 0.28, 33.92% id in [...] |
| maeB protein network | https://string-db.org/network/257313.BP1064 | Similar to Escherichia coli NADP-dependent malic enzyme Maeb or B2463 SW:MAO2_ECOLI (P76558) (759 aa) fasta scores: E(): 1.3e-173, 59.81% id in 759 aa, and to Haemophilus influenzae NADP-dependen [...] |
| BP1066 protein network | https://string-db.org/network/257313.BP1066 | Conserved hypothetical protein (Pseudogene); (G)4 in pertussis; GG(A)GG in parapertussis and bronchiseptica. |
| pstB protein network | https://string-db.org/network/257313.BP1068 | Phosphate transport ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC tran [...] |
| pstA protein network | https://string-db.org/network/257313.BP1069 | Similar to Escherichia coli phosphate transport system permease protein PstA or PhoT or B3726 SW:PSTA_ECOLI (P07654) (296 aa) fasta scores: E(): 1.8e-60, 58.45% id in 272 aa, and to Pasteurella m [...] |
| pstC protein network | https://string-db.org/network/257313.BP1070 | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; [...] |
| pstS protein network | https://string-db.org/network/257313.BP1071 | Phosphate-binding periplasmic protein precursor; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. |
| ppk protein network | https://string-db.org/network/257313.BP1072 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. |
| ppx protein network | https://string-db.org/network/257313.BP1073 | Exopolyphosphatase; Similar to Escherichia coli, and exopolyphosphatase Ppx or B2502 or Z3765 or Ecs3364 SW:PPX_ECOLI (P29014) (512 aa) fasta scores: E(): 1.8e-68, 40.88% id in 499 aa, and to Nei [...] |
| BP1074 protein network | https://string-db.org/network/257313.BP1074 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 28.0 kDa protein Scm10.09C TR:Q9RCY9 (EMBL:AL133469) (256 aa) fasta scores: E(): 7.9e-44, 50% id in 250 aa, and to [...] |
| mrsA protein network | https://string-db.org/network/257313.BP1075 | Phosphoglucomutase/phosphomannomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. |
| folP protein network | https://string-db.org/network/257313.BP1076 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...] |
| ftsH protein network | https://string-db.org/network/257313.BP1077 | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Bel [...] |
| rrmJ protein network | https://string-db.org/network/257313.BP1078 | Ribosomal RNA large subunit methyltransferase j; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. |
| BP1079 protein network | https://string-db.org/network/257313.BP1079 | Conserved hypothetical protein; Its N-terminal region is similar to Neisseria meningitidis hypothetical protein Nmb0800 TR:Q9K026 (EMBL:AE002433) (94 aa) fasta scores: E(): 2.7e-09, 47.87% id in [...] |
| BP1080 protein network | https://string-db.org/network/257313.BP1080 | Transposase for IS481 element. |
| BP1083 protein network | https://string-db.org/network/257313.BP1083 | C-terminal region of a putative membrane protein (pseudogene); 2 probable transmembrane helices predicted for BP1081 by TMHMM2.0 at aa 10-32 and 160-182. |
| thrB protein network | https://string-db.org/network/257313.BP1084 | Homoserine kinase; Similar to Pseudomonas aeruginosa homoserine kinase ThrB or Pa5495 SW:KHSE_PSEAE (P29364) (316 aa) fasta scores: E(): 6.6e-40, 43.17% id in 315 aa, and to Caulobacter crescentu [...] |
| dusA protein network | https://string-db.org/network/257313.BP1085 | Conserved hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines [...] |
| BP1086 protein network | https://string-db.org/network/257313.BP1086 | Transposase for IS481 element. |
| BP1087 protein network | https://string-db.org/network/257313.BP1087 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 15.1 kDa protein Rv2406c or Mtcy253.14 TR:P71737 (EMBL:Z81368) (142 aa) fasta scores: E(): 1.6e-11, 26.61% id in [...] |
| BP1088 protein network | https://string-db.org/network/257313.BP1088 | Putative membrane protein; Its N-terminal region is similar to Escherichia coli ribonuclease BN rbn or B3886 or Z5425 or Ecs4809 SW:RBN_ECOLI (P32146) (290 aa) fasta scores: E(): 1.8e-33, 39.2% i [...] |
| BP1089 protein network | https://string-db.org/network/257313.BP1089 | Putative membrane protein; Similar to Neisseria meningitidis hypothetical protein Nma0801 TR:Q9JVK4 (EMBL:AL162754) (117 aa) fasta scores: E(): 1.1e-13, 45.45% id in 99 aa, and to Vibrio cholerae [...] |
| selO protein network | https://string-db.org/network/257313.BP1090 | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). |
| BP1091 protein network | https://string-db.org/network/257313.BP1091 | Similar to Rhodobacter sphaeroides DmsO/TmaO-response regulator DorR TR:O30741 (EMBL:AF016236) (232 aa) fasta scores: E(): 8.7e-18, 33.76% id in 234 aa, and to Pseudomonas aeruginosa probable two [...] |
| BP1092 protein network | https://string-db.org/network/257313.BP1092 | Probable two-component histidine kinase; Similar to Escherichia coli sensor protein KdpD or B0695 SW:KDPD_ECOLI (P21865) (894 aa) fasta scores: E(): 6.1e-11, 30.9% id in 233 aa, and to Pseudomona [...] |
| BP1093 protein network | https://string-db.org/network/257313.BP1093 | Transposase for IS481 element. |
| livG protein network | https://string-db.org/network/257313.BP1094 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 7e-31, 41.73 [...] |
| livH protein network | https://string-db.org/network/257313.BP1095 | Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 4.1e-17, 33.88% id in 304 aa [...] |
| livK protein network | https://string-db.org/network/257313.BP1097 | High-affinity branched-chain amino acid transport system permease protein (Pseudogene); Large deletion in pertussis, relative to parapertussis and bronchiseptica, following this codon. This delet [...] |
| livF protein network | https://string-db.org/network/257313.BP1098 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 1.2e-26, 43.75% id in 240 aa, an [...] |
| BP1099 protein network | https://string-db.org/network/257313.BP1099 | Similar to Vibrio cholerae long-chain-fatty-acid--CoA ligase, putative Vc2484 TR:Q9KP89 (EMBL:AE004318) (601 aa) fasta scores: E(): 2e-51, 31.82% id in 597 aa, and to Aeropyrum pernix 651aa long [...] |
| BP1100 protein network | https://string-db.org/network/257313.BP1100 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2885 TR:Q9HZW2 (EMBL:AE004714) (198 aa) fasta scores: E(): 3.9e-24, 45.45% id in 176 aa, and to Pseudomonas fluorescens puta [...] |
| BP1101 protein network | https://string-db.org/network/257313.BP1101 | Putative membrane protein; No significant database matches. |
| lysS protein network | https://string-db.org/network/257313.BP1102 | Similar to Escherichia coli lysyl-tRNA synthetase LysS or HerC or AsuD or B2890 SW:SYK1_ECOLI (P13030) (504 aa) fasta scores: E(): 3.6e-115, 59.43% id in 498 aa, and to Neisseria meningitidis lys [...] |
| BP1103 protein network | https://string-db.org/network/257313.BP1103 | Probable short chain dehydrogenase; Similar to Homo sapiens sepiapterin reductase Spr SW:SPRE_HUMAN (P35270) (261 aa) fasta scores: E(): 2.1e-15, 38.4% id in 250 aa, and to Bacillus subtilis YueD [...] |
| prfB protein network | https://string-db.org/network/257313.BP1104 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. |
| recJ protein network | https://string-db.org/network/257313.BP1105 | Similar to Escherichia coli single-stranded-DNA-specific exonuclease RecJ or B2892 SW:RECJ_ECOLI (P21893) (577 aa) fasta scores: E(): 2.1e-86, 46.6% id in 575 aa, and to Neisseria meningitidis pu [...] |
| BP1106 protein network | https://string-db.org/network/257313.BP1106 | Putative exported protein; Similar to Xanthomonas campestris regulatory protein RpfE TR:Q9L4D4 (EMBL:AJ245997) (306 aa) fasta scores: E(): 6e-10, 30.59% id in 317 aa, and to Xylella fastidiosa hy [...] |
| lolC protein network | https://string-db.org/network/257313.BP1107 | Similar to Escherichia coli lipoprotein releasing system transmembrane protein LolE or B1118 SW:LOLE_ECOLI (P75958) (413 aa) fasta scores: E(): 1.4e-42, 36.27% id in 408 aa, and to Escherichia co [...] |
| lolD protein network | https://string-db.org/network/257313.BP1108 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane [...] |
| BP1109 protein network | https://string-db.org/network/257313.BP1109 | Similar to Escherichia coli putative deoxyribonuclease YjjV or B4378 SW:YJJV_ECOLI (P39408) (259 aa) fasta scores: E(): 7.3e-29, 42.06% id in 252 aa, and to Pseudomonas aeruginosa hypothetical pr [...] |
| sphB3 protein network | https://string-db.org/network/257313.BP1110 | Serine protease; Similar to Pseudomonas tolaasii serine protease EprS TR:O87811 (EMBL:AJ007828) (985 aa) fasta scores: E(): 1.1e-18, 25% id in 1060 aa, and to Serratia marcescens Ssp-h1 TR:Q54483 [...] |
| BP1111 protein network | https://string-db.org/network/257313.BP1111 | Hypothetical protein; No significant database matches. |
| bipA protein network | https://string-db.org/network/257313.BP1112 | Similar to Bordetella bronchiseptica putative outer membrane ligand binding protein BipA TR:Q9APE8 (EMBL:AF304006) (1578 aa) fasta scores: E(): 0, 79.75% id in 1576 aa, and to Escherichia coli O1 [...] |
| BP1115 protein network | https://string-db.org/network/257313.BP1115 | Transposase (Pseudogene); HMMPfam hit to PF00753, Metallo-beta-lactamase superfamily. |
| BP1116 protein network | https://string-db.org/network/257313.BP1116 | Conserved hypothetical protein; Similar to Salmonella typhimurium protein TrpH SW:TRPH_SALTY (O54453) (289 aa) fasta scores: E(): 1.8e-32, 39.78% id in 274 aa, and to Neisseria meningitidis hypot [...] |
| greB protein network | https://string-db.org/network/257313.BP1117 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a [...] |
| BP1118 protein network | https://string-db.org/network/257313.BP1118 | Transposase for IS481 element. |
| fim2 protein network | https://string-db.org/network/257313.BP1119 | Serotype 2 fimbrial subunit precursor; Bordetella pertussis is the causative agent of whooping cough. An essential step in the disease process is the attachment of the bacteria to the ciliated ep [...] |
| maeB-2 protein network | https://string-db.org/network/257313.BP1120 | Similar to Escherichia coli NADP-dependent malic enzyme MaeB or B2463 SW:MAO2_ECOLI (P76558) (759 aa) fasta scores: E(): 8.6e-184, 62.13% id in 758 aa, and to Pasteurella multocida Mdh Mdh_1 or p [...] |
| aceE-2 protein network | https://string-db.org/network/257313.BP1121 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| BP1122 protein network | https://string-db.org/network/257313.BP1122 | AsnC-family transcriptional regulator; Similar to Escherichia coli leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI or B0889 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E [...] |
| BP1123 protein network | https://string-db.org/network/257313.BP1123 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3934 TR:Q9HX82 (EMBL:AE004811) (678 aa) fasta scores: E(): 1.7e-151, 66.22% id in 678 aa, and to Neisseria meni [...] |
| odhA protein network | https://string-db.org/network/257313.BP1124 | Similar to Escherichia coli 2-oxoglutarate dehydrogenase E1 component SucA or B0726 or Z0880 or Ecs0751 SW:ODO1_ECOLI (P07015) (933 aa) fasta scores: E(): 3e-194, 53.87% id in 941 aa, and to Alca [...] |
| odhB protein network | https://string-db.org/network/257313.BP1125 | Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conv [...] |
| odhL protein network | https://string-db.org/network/257313.BP1126 | 2-oxoglutarate dehydrogenase complex, E3 component; Similar to Alcaligenes eutrophus dihydrolipoamide dehydrogenase OdhL SW:DLDH_ALCEU (P52992) (474 aa) fasta scores: E(): 4.8e-107, 60.29% id in [...] |
| BP1127 protein network | https://string-db.org/network/257313.BP1127 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus odhA, odhB, odhL, orf1 and orf5 genes TR:Q44029 (EMBL:X91877) (186 aa) fasta scores: E(): 5e-56, 77.83% id in 185 aa, and to Pseud [...] |
| fabG protein network | https://string-db.org/network/257313.BP1128 | Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 6e-23, 38.73% id in 253 aa, and to Pseudomonas aeruginosa 3 [...] |
| BP1129 protein network | https://string-db.org/network/257313.BP1129 | LysR-family transcriptional regulator; Similar to Frateuria spANA-18 regulator of cat2 gene cluster OrfR2 TR:Q9Z9Y2 (EMBL:AB009373) (295 aa) fasta scores: E(): 3.1e-30, 37.96% id in 295 aa, and t [...] |
| BP1130 protein network | https://string-db.org/network/257313.BP1130 | Transposase for IS481 element. |
| BP1131 protein network | https://string-db.org/network/257313.BP1131 | Putattive exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-52, 46.95% id in 328 aa, and to Agrob [...] |
| BP1132 protein network | https://string-db.org/network/257313.BP1132 | Probable short-chain dehydrogenase; Similar to Vibrio harveyi 3-oxoacyl-[acyl-carrier protein] reductase FabG SW:FABG_VIBHA (P55336) (244 aa) fasta scores: E(): 6.5e-16, 40.85% id in 235 aa, and [...] |
| tauD protein network | https://string-db.org/network/257313.BP1134 | Alpha-ketoglutarate-dependent taurine dioxygenase (Pseudogene); Inverted repeat for IS481 element. |
| fecI protein network | https://string-db.org/network/257313.BP1136 | ECF-family sigma factor; Similar to Escherichia coli probable RNA polymerase sigma factor FecI or B4293 SW:FECI_ECOLI (P23484) (173 aa) fasta scores: E(): 1e-21, 43.82% id in 162 aa, and to Pseud [...] |
| fecR protein network | https://string-db.org/network/257313.BP1137 | Putative signal transduction protein; Similar to Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 5.3e-19, 32.17% id in 317 aa, and to Pseudomonas putida [...] |
| bfrH protein network | https://string-db.org/network/257313.BP1138 | Similar to Escherichia coli ferrichrome-iron receptor precursor FhuA or TonA or B0150 SW:FHUA_ECOLI (P06971) (747 aa) fasta scores: E(): 4.9e-61, 38.21% id in 717 aa, and to Burkholderia cepacia [...] |
| BP1139 protein network | https://string-db.org/network/257313.BP1139 | Putative iron uptake protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0800 TR:Q9I5D8 (EMBL:AE004515) (177 aa) fasta scores: E(): 1.4e-08, 44.82% id in 87 aa. |
| BP1141 protein network | https://string-db.org/network/257313.BP1141 | Putative iron uptake protein (Pseudogene); TGA stop in pertussis; TGG in parapertussis and bronchiseptica. |
| BP1142 protein network | https://string-db.org/network/257313.BP1142 | Transposase for IS481 element. |
| trpS protein network | https://string-db.org/network/257313.BP1143 | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. |
| tex protein network | https://string-db.org/network/257313.BP1144 | Transcription accessory protein; Transcription accessory protein. Exact function not known. |
| BP1145 protein network | https://string-db.org/network/257313.BP1145 | Similar to Escherichia coli probable ATP-dependent helicase DinG or RarB or B0799 SW:DING_ECOLI (P27296) (716 aa) fasta scores: E(): 2.1e-27, 30.15% id in 703 aa, and to Escherichia coli probable [...] |
| comL protein network | https://string-db.org/network/257313.BP1146 | Competence lipoprotein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| rluD protein network | https://string-db.org/network/257313.BP1147 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| BP1148 protein network | https://string-db.org/network/257313.BP1148 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4543 SW:Y9E3_PSEAE (P33663) (242 aa) fasta scores: E(): 9.1e-33, 49.78% id in 229 aa, and to Escherichia coli hypothetical protein YfiH or [...] |
| phbC protein network | https://string-db.org/network/257313.BP1149 | Similar to Alcaligenes eutrophus poly-beta-hydroxybutyrate polymerase PhbC SW:PHBC_ALCEU (P23608) (589 aa) fasta scores: E(): 8.2e-129, 58.96% id in 541 aa, and to Burkholderia SpDSMZ 9242. phac [...] |
| phbB protein network | https://string-db.org/network/257313.BP1150 | Similar to Alcaligenes eutrophus acetoacetyl-CoA reductase PhbB SW:PHBB_ALCEU (P14697) (246 aa) fasta scores: E(): 1.6e-71, 76.82% id in 246 aa, and to Escherichia coli 3-oxoacyl-[acyl-carrier pr [...] |
| BP1151 protein network | https://string-db.org/network/257313.BP1151 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus hypothetical 21.0 kDa protein TR:O68272 (EMBL:AF026544) (183 aa) fasta scores: E(): 2.8e-48, 73.48% id in 181 aa, and to Burkholde [...] |
| BP1152 protein network | https://string-db.org/network/257313.BP1152 | Putative exported protein; Similar to Pasteurella multocida hypothetical protein Pm0452 TR:Q9CNH9 (EMBL:AE006081) (173 aa) fasta scores: E(): 3.9e-34, 55.74% id in 174 aa, and to Campylobacter je [...] |
| BP1153 protein network | https://string-db.org/network/257313.BP1153 | Putative exported protein; Similar to Prochlorothrix hollandica plastocyanin precursor PetE SW:PLAS_PROHO (P50057) (131 aa) fasta scores: E(): 2.7, 27.2% id in 125 aa, and to Rickettsia prowazeki [...] |
| BP1154 protein network | https://string-db.org/network/257313.BP1154 | Putative membrane protein; Similar to Neisseria meningitidis hypothetical protein Nmb0034 TR:Q9K1P7 (EMBL:AE002362) (279 aa) fasta scores: E(): 2.1e-20, 31.59% id in 269 aa, and to Streptomyces c [...] |
| BP1155 protein network | https://string-db.org/network/257313.BP1155 | Putative regulatory protein; Similar to Synechocystis sp nitrogen assimilation regulatory protein Slr1529 TR:P74210 (EMBL:D90913) (835 aa) fasta scores: E(): 1.5e-09, 26.03% id in 434 aa, and to [...] |
| BP1156 protein network | https://string-db.org/network/257313.BP1156 | Conserved hypotheticals protein; Similar to Pseudomonas aeruginosa phenazine/pyocyanine biosynthesis protein PhzF SW:PHZF_PSEAE (O69754) (278 aa) fasta scores: E(): 2.7e-08, 31.43% id in 299 aa, [...] |
| BP1157 protein network | https://string-db.org/network/257313.BP1157 | Transposase for IS481 element. |
| BP1158 protein network | https://string-db.org/network/257313.BP1158 | Putative dioxygenase; Similar to Agrobacterium tumefaciens Agr_l_1189p TR:AAK89172 (EMBL:AE008257) (134 aa) fasta scores: E(): 1.3e-30, 65.89% id in 129 aa, and to Pseudomonas aeruginosa hypothet [...] |
| BP1159 protein network | https://string-db.org/network/257313.BP1159 | Similar to Pseudomonas paucimobilis 2-pyrone-4,6-dicarboxylic acid hydrolase LigI TR:O87170 (EMBL:AB015964) (293 aa) fasta scores: E(): 6.8e-17, 30.76% id in 273 aa, and to Sphingomonas spLB126 F [...] |
| BP1160 protein network | https://string-db.org/network/257313.BP1160 | Putative lipoprotein; Similar to Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 3.1e-31, 37.1% id in 318 aa, and to Variovorax paradoxu [...] |
| BP1161 protein network | https://string-db.org/network/257313.BP1161 | Putative racemase; Similar to Rhizobium loti Mlr3365 protein TR:Q98GE6 (EMBL:AP003001) (389 aa) fasta scores: E(): 5.1e-26, 31.16% id in 385 aa, and to Streptomyces coelicolor putative isomerase [...] |
| BP1162 protein network | https://string-db.org/network/257313.BP1162 | Probable LysR-family transcriptional regulator; Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 3.4e-23, 34.02% id in 288 aa, a [...] |
| BP1163 protein network | https://string-db.org/network/257313.BP1163 | Similar to Picea abies short-chain type dehydrogenase/reductase SW:SDR1_PICAB (Q08632) (271 aa) fasta scores: E(): 1.4e-22, 38.37% id in 258 aa, and to Streptomyces coelicolor reductase Stah10.29 [...] |
| BP1164 protein network | https://string-db.org/network/257313.BP1164 | Putative membrane protein; Similar to Zymomonas mobilis tetracenomycin C resistance and export protein YjcC TR:Q9X3X9 (EMBL:AF088896) (487 aa) fasta scores: E(): 6.8e-48, 45.64% id in 436 aa, and [...] |
| BP1165 protein network | https://string-db.org/network/257313.BP1165 | Sodium/solute symporter; Similar to Escherichia coli sodium/pantothenate symporter PanF or B3258 SW:PANF_ECOLI (P16256) (483 aa) fasta scores: E(): 7.4e-16, 25.22% id in 448 aa, and to Haemophilu [...] |
| BP1165A protein network | https://string-db.org/network/257313.BP1165A | Putative membrane protein; No significant database matches. |
| ldcA protein network | https://string-db.org/network/257313.BP1166 | Similar to Escherichia coli muramoyltetrapeptide carboxypeptidase LdcA or B1192 SW:LDCA_ECOLI (P76008) (304 aa) fasta scores: E(): 1.3e-16, 32.83% id in 265 aa, and to Streptomyces coelicolor hyp [...] |
| BP1167 protein network | https://string-db.org/network/257313.BP1167 | Putative adolase; Similar to Rhizobium meliloti putative adolase/adducin sma1976 TR:AAK65743 (EMBL:AE007294) (249 aa) fasta scores: E(): 3.9e-36, 48.01% id in 227 aa, and to Pseudomonas aeruginos [...] |
| BP1168 protein network | https://string-db.org/network/257313.BP1168 | LysR-family transcriptional regulator; Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 3.4e-21, 32.36% id in 275 aa, [...] |
| BP1169 protein network | https://string-db.org/network/257313.BP1169 | Putative oxidoreductase; Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GarR or B3125 SW:GARR_ECOLI (P23523) (294 aa) fasta scores: E(): 6.8e-21, 31.61% id in 291 aa, and to Homo [...] |
| BP1170 protein network | https://string-db.org/network/257313.BP1170 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.1e-36, 37.73% id in 318 aa, and to Burkholderia cepacia hypotheti [...] |
| BP1171 protein network | https://string-db.org/network/257313.BP1171 | Conserved hypothetical protein; Similar to Rhizobium loti Mll4877 protein TR:Q98D37 (EMBL:AP003005) (194 aa) fasta scores: E(): 1.2e-33, 49.48% id in 194 aa, and to Eubacterium barkeri hypothetic [...] |
| BP1175 protein network | https://string-db.org/network/257313.BP1175 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0320 TR:Q9I6H1 (EMBL:AE004470) (116 aa) fasta scores: E(): 3.7e-06, 35.05% id in 97 aa, and to Escherichia coli [...] |
| astE protein network | https://string-db.org/network/257313.BP1176 | Similar to Pseudomonas aeruginosa succinylglutamate desuccinylase AstE or AruE or Pa0901 SW:ASTE_PSEAE (O50177) (332 aa) fasta scores: E(): 0.23, 25.82% id in 302 aa, and to Agrobacterium tumefac [...] |
| BP1177 protein network | https://string-db.org/network/257313.BP1177 | Transposase for IS481 element. |
| BP1178 protein network | https://string-db.org/network/257313.BP1178 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa2712 TR:Q9I0D0 (EMBL:AE004699) (287 aa) fasta scores: E(): 6.3e-48, 52.77% id in 288 aa, and to Rhizobium loti [...] |
| BP1180 protein network | https://string-db.org/network/257313.BP1180 | LysR-family transcriptional regulator; Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 8e-11, 28.74% id in 254 aa, and to Yersi [...] |
| glnQ protein network | https://string-db.org/network/257313.BP1181 | Amino acids ABC transporter, ATP-binding protein; Similar to Bacillus stearothermophilus glutamine transport ATP-binding protein GlnQ SW:GLNQ_BACST (P27675) (242 aa) fasta scores: E(): 1.6e-52, 6 [...] |
| BP1182 protein network | https://string-db.org/network/257313.BP1182 | Amino acids ABC transporter, permease protein; Similar to Pseudomonas aeruginosa probable permease of ABC transporter Pa4193 TR:Q9HWI8 (EMBL:AE004835) (234 aa) fasta scores: E(): 3.1e-45, 57.33% [...] |
| BP1183 protein network | https://string-db.org/network/257313.BP1183 | Amino acids ABC transporter, permease protein; Similar to Escherichia coli glutamate/aspartate transport system permease protein gltj gltj or b0654 SW:GLTJ_ECOLI (P41074) (246 aa) fasta scores: E [...] |
| BP1184 protein network | https://string-db.org/network/257313.BP1184 | Probable solute-binding protein; Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or B1920 SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 4.8e-13, 26% id in 223 [...] |
| aspC protein network | https://string-db.org/network/257313.BP1185 | Similar to Rhizobium leguminosarum aspartate aminotransferase AspC or AatA SW:AAT_RHILP (O86459) (400 aa) fasta scores: E(): 3.8e-76, 51.76% id in 396 aa, and to Rhizobium meliloti aspartate amin [...] |
| BP1186 protein network | https://string-db.org/network/257313.BP1186 | Putative aldolase; Similar to Pseudomonas straminea 4-hydroxy-4-methyl-2-oxoglutarate aldolase ProA TR:Q9AQI0 (EMBL:AB050935) (227 aa) fasta scores: E(): 1.2e-20, 39.37% id in 193 aa, and to Agro [...] |
| BP1188 protein network | https://string-db.org/network/257313.BP1188 | Hypothetical protein; Similar to the internal region of Bordetella bronchiseptica adhesin FhaB TR:Q9JP78 (EMBL:AF111796) (3634 aa) fasta scores: E(): 0.8, 28.31% id in 226 aa. |
| BP1188A protein network | https://string-db.org/network/257313.BP1188A | Hypothetical protein; Similar to Homo sapiens MHC class III region complement C4A TR:Q30211 (EMBL:S58715) (79 aa) fasta scores: E(): 4.1, 32.87% id in 73 aa. |
| BP1189 protein network | https://string-db.org/network/257313.BP1189 | Lipoprotein; Similar to Vibrio cholerae lipoprotein Vc1962 TR:Q9KQN6 (EMBL:AE004271) (163 aa) fasta scores: E(): 5.4e-15, 42.63% id in 129 aa, and to Treponema pallidum 17 kDa lipoprotein precurs [...] |
| BP1190 protein network | https://string-db.org/network/257313.BP1190 | Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC [...] |
| BP1191 protein network | https://string-db.org/network/257313.BP1191 | Similar to Caulobacter crescentus putative RNA polymerase sigma factor Cc3266 TR:Q9A3D8 (EMBL:AE005990) (291 aa) fasta scores: E(): 2.9e-50, 53.19% id in 282 aa, and to Streptomyces coelicolor pu [...] |
| BP1192 protein network | https://string-db.org/network/257313.BP1192 | Putative exported protein; Similar to Burkholderia cepacia phosphate transport protein TR:Q9RMS6 (EMBL:AF190626) (181 aa) fasta scores: E(): 7.3, 31.63% id in 98 aa. |
| BP1193 protein network | https://string-db.org/network/257313.BP1193 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3612 TR:Q9HY14 (EMBL:AE004781) (73 aa) fasta scores: E(): 1.6e-11, 51.47% id in 68 aa, and to Vibrio cholerae hypothetical protein Vca0163 [...] |
| BP1194 protein network | https://string-db.org/network/257313.BP1194 | Similar to Thermotoga maritima conserved hypothetical protein Tm1181 TR:Q9X0R3 (EMBL:AE001774) (179 aa) fasta scores: E(): 7.8e-26, 45.18% id in 166 aa, and to Bacillus halodurans Bh1524 protein [...] |
| BP1195 protein network | https://string-db.org/network/257313.BP1195 | Ferredoxin; Similar to Synechococcus sp ferredoxin II SW:FER2_SYNP6 (P08451) (104 aa) fasta scores: E(): 0.00022, 37.5% id in 96 aa, and to Vibrio cholerae ferredoxin Vc0311 TR:Q9KV47 (EMBL:AE004 [...] |
| BP1196 protein network | https://string-db.org/network/257313.BP1196 | Putative exported protein; No significant database matches. |
| btr protein network | https://string-db.org/network/257313.BP1197 | Transcriptional regulatory protein; May regulate gene expression in response to changes in oxygen levels or to changes in the redox potential of the bacterial environment. |
| clpB protein network | https://string-db.org/network/257313.BP1198 | ATP-dependent protease, ATPase subunit; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and Gr [...] |
| bapB protein network | https://string-db.org/network/257313.BP1199 | Autotransporter (pseudogene); Inverted repeat for IS481 element. |
| tcfA protein network | https://string-db.org/network/257313.BP1201 | Tracheal colonization factor precursor; Identical to the previously sequenced Bordetella pertussis tracheal colonization factor precursor Tcfa2 TR:O86135 (EMBL:AJ009785) (647 aa) fasta scores: E( [...] |
| BP1202 protein network | https://string-db.org/network/257313.BP1202 | Similar to Rhizobium loti transcriptional regulator Mll3386 TR:Q98GC7 (EMBL:AP003001) (219 aa) fasta scores: E(): 2.1e-34, 50.73% id in 205 aa, and to Mycobacterium tuberculosis CDC1551 transcrip [...] |
| BP1203 protein network | https://string-db.org/network/257313.BP1203 | Conserved hypothetical protein; Similar to Rhizobium loti Mll9388 protein Mll9388 TR:Q981G1 (EMBL:AP003016) (408 aa) fasta scores: E(): 5.5e-89, 63.03% id in 395 aa, and to Rhizobium sp hypotheti [...] |
| BP1204 protein network | https://string-db.org/network/257313.BP1204 | Similar to Rhizobium meliloti conserved hypothetical protein Sma1332 TR:AAK65386 (EMBL:AE007260) (280 aa) fasta scores: E(): 9.4e-70, 69.09% id in 275 aa, and to Rhizobium loti Mll9387 protein Ml [...] |
| BP1205 protein network | https://string-db.org/network/257313.BP1205 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr1698 protein Mlr1698 TR:Q98K03 (EMBL:AP002998) (147 aa) fasta scores: E(): 5.6e-16, 38.29% id in 141 aa, and to Mycobacterium tubercul [...] |
| BP1206 protein network | https://string-db.org/network/257313.BP1206 | LysR-family transcriptional regulator; Similar to Salmonella typhimurium OsmT protein TR:CAC44465 (EMBL:AJ313506) (308 aa) fasta scores: E(): 3.8e-19, 31.66% id in 300 aa, and to Agrobacterium tu [...] |
| BP1207 protein network | https://string-db.org/network/257313.BP1207 | N-acyl-D-glutamate deacylase; Similar to Alcaligenes xylosoxydans xylosoxydans N-acyl-D-glutamate deacylase SW:NDED_ALCXX (P94211) (488 aa) fasta scores: E(): 1.9e-144, 78.78% id in 476 aa, and t [...] |
| BP1208 protein network | https://string-db.org/network/257313.BP1208 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.6e-47, 44.98% id in 309 aa, and to Comamo [...] |
| BP1209 protein network | https://string-db.org/network/257313.BP1209 | Probable oxidoreductase; Similar to Escherichia coli sulfite reductase [NADPH] flavoprotein alpha-component CysJ or B2764 SW:CYSJ_ECOLI (P38038) (598 aa) fasta scores: E(): 7.2e-14, 27.01% id in [...] |
| apbE protein network | https://string-db.org/network/257313.BP1210 | Thiamine biosynthesis lipoprotein precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a tar [...] |
| BP1211 protein network | https://string-db.org/network/257313.BP1211 | Putative exported protein; Similar to Xylella fastidiosa hypothetical protein Xf0595 TR:Q9PFR2 (EMBL:AE003905) (267 aa) fasta scores: E(): 4e-46, 50.76% id in 260 aa, and to Caulobacter crescentu [...] |
| BP1212 protein network | https://string-db.org/network/257313.BP1212 | Putative exported protein; Similar to Caulobacter crescentus hypothetical protein Cc3060 TR:Q9A3Z0 (EMBL:AE005969) (171 aa) fasta scores: E(): 1.3e-34, 55.23% id in 172 aa, and to Xylella fastidi [...] |
| BP1213 protein network | https://string-db.org/network/257313.BP1213 | Putative membrane protein; Similar to Caulobacter crescentus hypothetical protein Cc3059 TR:Q9A3Z1 (EMBL:AE005969) (209 aa) fasta scores: E(): 2.7e-43, 55.92% id in 211 aa, and to Xylella fastidi [...] |
| nodI protein network | https://string-db.org/network/257313.BP1214 | ABC, transporter, ATP-binding protein; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbios [...] |
| nodJ protein network | https://string-db.org/network/257313.BP1215 | ABC transporter, permease protein; Similar to Rhizobium sp nodulation protein J NodJ or Y4hE SW:NODJ_RHISN (P55475) (262 aa) fasta scores: E(): 2.2e-39, 42.3% id in 260 aa, and to Bradyrhizobium [...] |
| BP1216 protein network | https://string-db.org/network/257313.BP1216 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa5409 TR:Q9HTF5 (EMBL:AE004953) (186 aa) fasta scores: E(): 1.1e-33, 55.3% id in 179 aa, and to Rhizobium loti M [...] |
| crcB protein network | https://string-db.org/network/257313.BP1217 | Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. |
| BP1218 protein network | https://string-db.org/network/257313.BP1218 | Putative exported protein; Similar to Zymomonas mobilis shc hpnE TR:Q56996 (EMBL:X80766) (414 aa) fasta scores: E(): 4.8e-06, 25.87% id in 456 aa, and to Neisseria meningitidis putative oxidoredu [...] |
| BP1219 protein network | https://string-db.org/network/257313.BP1219 | Putative phytoene synthase; Similar to Narcissus pseudonarcissus phytoene synthase precursor Psy SW:PSY_NARPS (P53797) (423 aa) fasta scores: E(): 8.1e-29, 32.72% id in 275 aa, and to Neisseria m [...] |
| BP1220 protein network | https://string-db.org/network/257313.BP1220 | Similar to Streptomyces griseus phytoene synthase CrtB or CrtI SW:CRTB_STRGR (P54977) (342 aa) fasta scores: E(): 2.4e-14, 34.57% id in 269 aa, and to Neisseria meningitidis putative transferase [...] |
| dadX protein network | https://string-db.org/network/257313.BP1221 | Alanine racemase, catabolic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. |
| BP1222 protein network | https://string-db.org/network/257313.BP1222 | Probable short-chain dehydrogenase; Similar to Streptococcus agalactiae CylG TR:Q9X429 (EMBL:AF093787) (240 aa) fasta scores: E(): 1e-20, 34.16% id in 240 aa, and to Pseudomonas aeruginosa probab [...] |
| BP1223 protein network | https://string-db.org/network/257313.BP1223 | Putative membrane protein; No significant database matches. |
| BP1224 protein network | https://string-db.org/network/257313.BP1224 | Transposase for IS481 element. |
| BP1225 protein network | https://string-db.org/network/257313.BP1225 | Similar to Pseudomonas aeruginosa putative RNA polymerase sigma factor Pa2896 TR:Q9HZV1 (EMBL:AE004716) (194 aa) fasta scores: E(): 8.5e-19, 43.15% id in 190 aa, and to Rhizobium loti RNA polymer [...] |
| radA protein network | https://string-db.org/network/257313.BP1227 | Putative exported protein (pseudogene); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-m [...] |
| BP1228 protein network | https://string-db.org/network/257313.BP1228 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa2847 TR:Q9HZZ6 (EMBL:AE004711) (249 aa) fasta scores: E(): 2.8e-32, 45.45% id in 242 aa, and to Streptomyces co [...] |
| BP1229 protein network | https://string-db.org/network/257313.BP1229 | Putative exported protein; No significant database matches. |
| norM protein network | https://string-db.org/network/257313.BP1230 | Similar to Escherichia coli multidrug resistance protein NorM or B1663 SW:NORM_ECOLI (P37340) (457 aa) fasta scores: E(): 1.2e-33, 32% id in 450 aa, and to Neisseria meningitidis probable multidr [...] |
| BP1231 protein network | https://string-db.org/network/257313.BP1231 | Putative membrane protein; Similar to Neisseria meningitidis putative inner membrane protein Nma0497 TR:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.5e-18, 26.04% id in 599 aa, and to Xyl [...] |
| rpmE2 protein network | https://string-db.org/network/257313.BP1232 | Similar to Xylella fastidiosa 50S ribosomal protein L31 Xf1534 TR:Q9PD45 (EMBL:AE003983) (80 aa) fasta scores: E(): 2.4e-14, 53.75% id in 80 aa, and to Streptococcus pneumoniae R6 50S ribosomal p [...] |
| kynA protein network | https://string-db.org/network/257313.BP1233 | Putative tryptophan oxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catal [...] |
| kynB protein network | https://string-db.org/network/257313.BP1234 | Conserved hypothetical protein; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. |
| radC protein network | https://string-db.org/network/257313.BP1235 | DNA repair protein; Similar to Escherichia coli DNA repair protein RadC or B3638 SW:RADC_ECOLI (P25531) (222 aa) fasta scores: E(): 2.9e-26, 37.44% id in 211 aa, and to Pseudomonas aeruginosa DNA [...] |
| fkpB protein network | https://string-db.org/network/257313.BP1236 | Similar to Escherichia coli, and FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase FkbP or SlpA or B0028 or Z0033 or Ecs0031 SW:FKBX_ECOLI (P22563) (148 aa) fasta scores: E(): 5.9e-11, 33.56% [...] |
| lytB protein network | https://string-db.org/network/257313.BP1237 | Putative drug tolerance protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate ( [...] |
| BP1238 protein network | https://string-db.org/network/257313.BP1238 | Similar to Pseudomonas sp glutathione-S-transferase homolog NagL TR:O86043 (EMBL:AF036940) (212 aa) fasta scores: E(): 4.3e-42, 53.52% id in 213 aa, and to Rhizobium loti glutathione S-transferas [...] |
| BP1239 protein network | https://string-db.org/network/257313.BP1239 | Conserved hypothetical protein; Similar to Helicobacter pylori J99 putative jhp0839 TR:Q9ZKU6 (EMBL:AE001513) (99 aa) fasta scores: E(): 0.0048, 30% id in 80 aa. |
| BP1240 protein network | https://string-db.org/network/257313.BP1240 | Similar to Rhizobium meliloti conserved hypothetical protein SMC00684 TR:CAC47266 (EMBL:AL591791) (381 aa) fasta scores: E(): 1.8e-27, 35.07% id in 345 aa, and to Agrobacterium tumefaciens Agr_l_ [...] |
| BP1241 protein network | https://string-db.org/network/257313.BP1241 | Conserved hypothetical protein; Similar to Agrobacterium tumefaciens Agr_c_4536p TR:AAK88228 (EMBL:AE008162) (196 aa) fasta scores: E(): 3.4e-34, 53.96% id in 189 aa, and to Escherichia coli from [...] |
| BP1242 protein network | https://string-db.org/network/257313.BP1242 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0056 TR:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 1.8e-68, 61.33% id in 300 aa, and to Vibrio cholerae transcriptio [...] |
| BP1243 protein network | https://string-db.org/network/257313.BP1243 | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from m [...] |
| BP1244 protein network | https://string-db.org/network/257313.BP1244 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr8253 protein TR:Q983N1 (EMBL:AP003013) (546 aa) fasta scores: E(): 5.6e-20, 31.49% id in 562 aa, and to Escherichia coli hypothetical [...] |
| rimP protein network | https://string-db.org/network/257313.BP1245 | Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. |
| nusA protein network | https://string-db.org/network/257313.BP1246 | N utilization substance protein A; Participates in both transcription termination and antitermination. |
| infB protein network | https://string-db.org/network/257313.BP1247 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...] |
| rbfA protein network | https://string-db.org/network/257313.BP1248 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...] |
| truB protein network | https://string-db.org/network/257313.BP1249 | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. |
| typA protein network | https://string-db.org/network/257313.BP1250 | GTP-binding elongation factor; Similar to Escherichia coli GTP-binding protein TypA/BipA TypA or BipA or B3871 SW:TYPA_ECOLI (P32132) (591 aa) fasta scores: E(): 2.4e-140, 63.34% id in 592 aa, an [...] |
| BP1251 protein network | https://string-db.org/network/257313.BP1251 | Putative toxin; Similar to the previously sequenced Bordetella pertussis pertussis toxin subunit 2 precursor PtxB SW:TOX2_BORPE (P04978) (226 aa) fasta scores: E(): 1.6e-06, 30.43% id in 207 aa, [...] |
| BP1252 protein network | https://string-db.org/network/257313.BP1252 | Putative exported protein; No significant database matches. |
| BP1253 protein network | https://string-db.org/network/257313.BP1253 | Putative exported protein; Similar to Neisseria meningitidis hypothetical protein Nmb0283 TR:Q9K184 (EMBL:AE002385) (210 aa) fasta scores: E(): 1.1e-35, 55.89% id in 195 aa, and to Neisseria meni [...] |
| polA protein network | https://string-db.org/network/257313.BP1254 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. |
| BP1255 protein network | https://string-db.org/network/257313.BP1255 | Putative membrane protein; No significant database matches. |
| BP1256 protein network | https://string-db.org/network/257313.BP1256 | Similar to Escherichia coli putative carboxymethylenebutenolidase YsgA or B3830 SW:DLHH_ECOLI (P56262) (258 aa) fasta scores: E(): 3.8e-48, 51.58% id in 252 aa, and to Methylobacterium extorquens [...] |
| BP1257 protein network | https://string-db.org/network/257313.BP1257 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa4822 TR:Q9HUY8 (EMBL:AE004895) (555 aa) fasta scores: E(): 1.1e-66, 44.82% id in 551 aa, and to Rhizobium melil [...] |
| sdaA protein network | https://string-db.org/network/257313.BP1258 | L-serine dehydratase 1; Similar to Escherichia coli L-serine dehydratase 1 SdaA or B1814 SW:SDHL_ECOLI (P16095) (454 aa) fasta scores: E(): 1e-88, 53.89% id in 462 aa, and to Pseudomonas aerugino [...] |
| queH protein network | https://string-db.org/network/257313.BP1259 | Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) an [...] |
| glnE protein network | https://string-db.org/network/257313.BP1260 | Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, t [...] |
| rho protein network | https://string-db.org/network/257313.BP1262 | Conserved hypothetical protein (Pseudogene); Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, [...] |
| trxA protein network | https://string-db.org/network/257313.BP1263 | Thioredoxin 1; Similar to Escherichia coli thioredoxin 1 TrxA or TsnC or FipA or B3781 SW:THIO_ECOLI (P00274) (108 aa) fasta scores: E(): 6.4e-28, 66.35% id in 107 aa, and to Pseudomonas aerugino [...] |
| parE protein network | https://string-db.org/network/257313.BP1264 | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DN [...] |
| BP1265 protein network | https://string-db.org/network/257313.BP1265 | Putative membrane protein; Similar to Streptomyces coelicolor putative membrane protein Sc10h5.06 TR:O86498 (EMBL:AL031232) (207 aa) fasta scores: E(): 1.8, 32.14% id in 140 aa. |
| parC protein network | https://string-db.org/network/257313.BP1266 | Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DN [...] |
| BP1267 protein network | https://string-db.org/network/257313.BP1267 | Putative membrane protein; Similar to Bacillus subtilis hypothetical 46.2 kDa protein in asnH-gntR intergenic region YxaH or S14H SW:YXAH_BACSU (P42107) (402 aa) fasta scores: E(): 8.4e-27, 31% i [...] |
| BP1270 protein network | https://string-db.org/network/257313.BP1270 | C-terminal region of a putative membrane protein (Pseudogene); HMMPfam hit to PF00892, Integral membrane protein DUF6. |
| livF-2 protein network | https://string-db.org/network/257313.BP1273 | Putative aspartate racemase (Pseudogene); Pseudogene. This CDS appears to be missing the N-terminal region, this is probably due to the a large deletion immediately upstream. Similar to Shigella [...] |
| livG-2 protein network | https://string-db.org/network/257313.BP1274 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or Ecs4302 SW:LIVG_ECOLI (P22730) (255 aa) fasta scores: E(): 2.1e-54, 60. [...] |
| livM protein network | https://string-db.org/network/257313.BP1275 | Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivM or B3456 SW:LIVM_ECOLI (P22729) (425 aa) fasta scores: E(): 8e-84, 57.7% id in 409 aa, a [...] |
| livH-2 protein network | https://string-db.org/network/257313.BP1276 | Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivH or B3457 SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 3.7e-61, 58.52% id in 311 aa [...] |
| livJ protein network | https://string-db.org/network/257313.BP1277 | Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 7.4e-64, 48.05% id in 360 aa, and to Pseudomonas aeruginosa leuc [...] |
| BP1278 protein network | https://string-db.org/network/257313.BP1278 | Transposase for IS481 element. |
| BP1279 protein network | https://string-db.org/network/257313.BP1279 | Putative membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precurso [...] |
| proC protein network | https://string-db.org/network/257313.BP1280 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. |
| ugpB protein network | https://string-db.org/network/257313.BP1281 | Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 4.6e-91, 54.21% id in 439 aa, and to Agroba [...] |
| ugpA protein network | https://string-db.org/network/257313.BP1282 | Similar to Escherichia coli sn-glycerol-3-phosphate transport system permease protein UgpA or B3452 SW:UGPA_ECOLI (P10905) (295 aa) fasta scores: E(): 2.1e-66, 59.65% id in 290 aa, and to Rhizobi [...] |
| ugpE protein network | https://string-db.org/network/257313.BP1283 | Sn-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the su [...] |
| ugpC protein network | https://string-db.org/network/257313.BP1284 | Sn-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport sy [...] |
| livJ-2 protein network | https://string-db.org/network/257313.BP1285 | Similar to Escherichia coli leu/ile/val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 3.8e-67, 49.86% id in 361 aa, and to Pseudomonas aeruginosa leuc [...] |
| BP1286 protein network | https://string-db.org/network/257313.BP1286 | Similar to Caulobacter crescentus hypothetical protein Cc2185 TR:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 9.9e-30, 49.24% id in 199 aa, and to Pseudomonas aeruginosa hypothetical protei [...] |
| BP1287 protein network | https://string-db.org/network/257313.BP1287 | Transposase for IS481 element. |
| BP1289 protein network | https://string-db.org/network/257313.BP1289 | Putative membrane protein (Pseudogene); Signal peptide predicted for BP1288 by SignalP 2.0 HMM (Signal peptide probabilty 0.888) with cleavage site probability 0.675 between residues 33 and 34. |
| BP1290 protein network | https://string-db.org/network/257313.BP1290 | Conserved hypothetical protein; Similar to Yersinia enterocolitica hypothetical 16.3 kDa protein TR:Q9F4G7 (EMBL:AY008264) (148 aa) fasta scores: E(): 5.1e-08, 31.75% id in 148 aa, and to Rhizobi [...] |
| BP1291 protein network | https://string-db.org/network/257313.BP1291 | Conserved hypothetical protein; Similar to Yersinia enterocolitica hypothetical 17.2 kDa protein TR:Q9F4G8 (EMBL:AY008264) (152 aa) fasta scores: E(): 0.00042, 31.32% id in 166 aa, and to Rhizobi [...] |
| BP1292 protein network | https://string-db.org/network/257313.BP1292 | Similar to Escherichia coli putative lipoprotein YaeC precursor YaeC or B0197 SW:YAEC_ECOLI (P28635) (271 aa) fasta scores: E(): 9.1e-26, 36.53% id in 260 aa, and to Pseudomonas aeruginosa hypoth [...] |
| lldD-2 protein network | https://string-db.org/network/257313.BP1293 | Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or B3605 SW:LLDD_ECOLI (P33232) (396 aa) fasta scores: E(): 2.2e-37, 38.16% id in 359 aa, and to Streptomyces rishiriensis dehydro [...] |
| psd protein network | https://string-db.org/network/257313.BP1294 | Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). |
| BP1295 protein network | https://string-db.org/network/257313.BP1295 | Hypothetical protein; No significant database matches. |
| BP1296 protein network | https://string-db.org/network/257313.BP1296 | Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein Pa4972 TR:Q9HUJ3 (EMBL:AE004910) (248 aa) fasta scores: E(): 1.5e-25, 37.61% id in 226 aa, and to Streptomyces coelico [...] |
| BP1297 protein network | https://string-db.org/network/257313.BP1297 | Similar to Pyrococcus abyssi lipoate-protein ligase A related Pab1916 TR:Q9V0V8 (EMBL:AJ248285) (249 aa) fasta scores: E(): 2e-24, 37.02% id in 235 aa, and to Pyrococcus horikoshii 249aa long hyp [...] |
| BP1298 protein network | https://string-db.org/network/257313.BP1298 | Conserved hypothetical protein; Similar to Halobacterium sp Vng6255C TR:Q9HHS3 (EMBL:AE005157) (89 aa) fasta scores: E(): 5.3e-08, 40.21% id in 92 aa. |
| BP1299 protein network | https://string-db.org/network/257313.BP1299 | Putative acetyltransferase; Similar to Streptomyces griseus regulatory protein for C-P lyase PhnO-like TR:Q54244 (EMBL:D29961) (150 aa) fasta scores: E(): 7.3e-26, 52% id in 150 aa, and to Rhizob [...] |
| BP1300 protein network | https://string-db.org/network/257313.BP1300 | Similar to Zea mays glutathione transferase III Gst3B TR:Q9SM20 (EMBL:AJ010296) (221 aa) fasta scores: E(): 1.2e-10, 30.28% id in 208 aa, and to Pseudomonas aeruginosa probable glutathione S-tran [...] |
| BP1301 protein network | https://string-db.org/network/257313.BP1301 | Glutathione peroxidase; Similar to Schizosaccharomyces pombe glutathione peroxidase Gpx1 or Spbc32f12.03C SW:GSHJ_SCHPO (O59858) (158 aa) fasta scores: E(): 1.7e-32, 50.96% id in 155 aa, and to P [...] |
| BP1302 protein network | https://string-db.org/network/257313.BP1302 | Putative exported protein; Similar to Caulobacter crescentus hypothetical protein Cc1979 TR:Q9A6V4 (EMBL:AE005871) (407 aa) fasta scores: E(): 1.1e-29, 32.41% id in 398 aa, and to Agrobacterium t [...] |
| BP1304 protein network | https://string-db.org/network/257313.BP1304 | Conserved hypothetical protein (Pseudogene); Large deletion in pertussis relative to parapertussis. |
| BP1305 protein network | https://string-db.org/network/257313.BP1305 | Conserved hypothetical protein; Its C-terminal region is similar to hypothetical racemases from a wide range of bacteria. No significant similarity over the entire length of the CDS; Belongs to t [...] |
| arsC protein network | https://string-db.org/network/257313.BP1306 | Similar to Escherichia coli arsenate reductase ArsC or ArsG or B3503 SW:ARSC_ECOLI (P37311) (141 aa) fasta scores: E(): 9.4e-21, 57.52% id in 113 aa, and to Rhizobium meliloti hypothetical arsena [...] |
| BP1307 protein network | https://string-db.org/network/257313.BP1307 | Similar to Escherichia coli bacterioferritin comigratory protein Bcp or B2480 or Z3739 or Ecs3342 SW:BCP_ECOLI (P23480) (156 aa) fasta scores: E(): 1e-06, 28.84% id in 156 aa, and to Caulobacter [...] |
| BP1308 protein network | https://string-db.org/network/257313.BP1308 | Transposase for IS481 element. |
| BP1313 protein network | https://string-db.org/network/257313.BP1313 | Putative metalloprotease (Pseudogene); (GC)4 in pertussis; (GC)5 in parapertussis and bronchiseptica. |
| BP1314 protein network | https://string-db.org/network/257313.BP1314 | Putative exported protein; Similar to Rhizobium meliloti putative oxidoreductase protein Smb20656 TR:CAC49763 (EMBL:AL603646) (289 aa) fasta scores: E(): 5.6e-44, 44.52% id in 274 aa, and to Rhiz [...] |
| BP1315 protein network | https://string-db.org/network/257313.BP1315 | Universal stress family protein; Similar to Halobacterium sp Vng1536C TR:Q9HPP5 (EMBL:AE005067) (147 aa) fasta scores: E(): 3.5e-10, 36.23% id in 138 aa, and to Methanococcus jannaschii hypotheti [...] |
| BP1318 protein network | https://string-db.org/network/257313.BP1318 | Putative membrane protein (Pseudogene); Signal peptide predicted for BP1317 by SignalP 2.0 HMM (Signal peptide probabilty 0.924) with cleavage site probability 0.365 between residues 22 and 23. |
| BP1319 protein network | https://string-db.org/network/257313.BP1319 | Similar to Salmonella typhimurium putative transcriptional regulatory protein PtsJ SW:PTSJ_SALTY (P40193) (430 aa) fasta scores: E(): 1.7e-73, 54.31% id in 429 aa, and to Streptomyces coelicolor [...] |
| BP1320 protein network | https://string-db.org/network/257313.BP1320 | Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. |
| pdxK protein network | https://string-db.org/network/257313.BP1321 | Pyridoxine kinase; B6-vitamer kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxine (PN), pyridoxal (PL), and pyridoxamine (PM), form [...] |
| BP1323 protein network | https://string-db.org/network/257313.BP1323 | Two-component sensor histidine kinase (Pseudogene); HMMPfam hit to PF00072, Response regulator receiver domain. |
| malQ protein network | https://string-db.org/network/257313.BP1326 | Putative 4-alpha-glucanotransferase (pseudogene); CGC(-) in pertussis; CGC(A) in parapertussis and bronchiseptica. |
| glgX protein network | https://string-db.org/network/257313.BP1327 | Probable glycosyl hydrolase; Similar to Escherichia coli glycogen operon protein GlgX or GlyX or B3431 SW:GLGX_ECOLI (P15067) (657 aa) fasta scores: E(): 5.3e-95, 47.25% id in 656 aa, and to Pseu [...] |
| glgB protein network | https://string-db.org/network/257313.BP1328 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains [...] |
| BP1329 protein network | https://string-db.org/network/257313.BP1329 | Alpha-glucosidase; Similar to Pimelobacter sp trehalose synthase treS TR:P72235 (EMBL:D78198) (573 aa) fasta scores: E(): 2.4e-90, 58.22% id in 553 aa, and to Pseudomonas aeruginosa probable treh [...] |
| BP1333 protein network | https://string-db.org/network/257313.BP1333 | Conserved hypothetical protein (pseudogene); This CDS is disrupted by the insertion of IS481. Similar to The N-terminus of Pseudomonas aeruginosa hypothetical protein Pa2244 SWALL:Q9I1M5 (EMBL:AE [...] |
| BP1334 protein network | https://string-db.org/network/257313.BP1334 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2168 TR:Q9I1U7 (EMBL:AE004644) (258 aa) fasta scores: E(): 8.8e-66, 65% id in 240 aa. |
| BP1335 protein network | https://string-db.org/network/257313.BP1335 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2167 TR:Q9I1U8 (EMBL:AE004644) (365 aa) fasta scores: E(): 2.1e-39, 41.48% id in 364 aa. |
| clsB-2 protein network | https://string-db.org/network/257313.BP1339 | Probable phospholipase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. |
| BP1340 protein network | https://string-db.org/network/257313.BP1340 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2156 TR:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 2.2e-62, 63.93% id in 244 aa, and to Escherichia coli hypothetical protein YbhP [...] |
| BP1342 protein network | https://string-db.org/network/257313.BP1342 | Hypothetical protein (pseudogene); No significant database matches. |
| mxcB protein network | https://string-db.org/network/257313.BP1344 | Iron utilization protein (Pseudogene); ~27 bp deletion in pertussis; ~27 bp insertion in parapertussis and bronchiseptica. |
| BP1345 protein network | https://string-db.org/network/257313.BP1345 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 123.1 kDa protein Rv1251c or Mtv006.23C TR:O50466 (EMBL:AL021006) (1139 aa) fasta scores: E(): 3e-51, 37.83% id [...] |
| BP1346 protein network | https://string-db.org/network/257313.BP1346 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2417 TR:Q9I164 (EMBL:AE004669) (312 aa) fasta scores: E(): 4.1e-55, 52.72% id in 294 aa, and to Rhizobium meliloti putative [...] |
| BP1347 protein network | https://string-db.org/network/257313.BP1347 | Putative reductase; Similar to Rhizobium loti Mll5191 protein Mll5191 TR:Q98CD9 (EMBL:AP003005) (203 aa) fasta scores: E(): 4.2e-35, 52.17% id in 184 aa, and to Streptomyces coelicolor putative r [...] |
| citE protein network | https://string-db.org/network/257313.BP1348 | Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SW:CILB_LEUMC (O53078) (302 aa) fasta scores: E(): 1.8e-26, 35.06% id in 288 aa, and to Caulobacter crescentus citrate lyase bet [...] |
| BP1349 protein network | https://string-db.org/network/257313.BP1349 | Similar to Rhizobium meliloti putative transcriptional regulator, GntR family protein Smb20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 4.7e-14, 35.29% id in 204 aa, and to Pseudom [...] |
| BP1350 protein network | https://string-db.org/network/257313.BP1350 | Similar to Giardia lamblia acetyl-CoA synthetase TR:Q9Y1N2 (EMBL:AF107206) (726 aa) fasta scores: E(): 8.7e-33, 27.75% id in 735 aa, and to Archaeoglobus fulgidus conserved hypothetical protein A [...] |
| BP1352 protein network | https://string-db.org/network/257313.BP1352 | Putative exported protein (pseudogene); Signal peptide predicted for BP1351 by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.996 between residues 17 and 18. |
| BP1353 protein network | https://string-db.org/network/257313.BP1353 | Conserved hypothetical protein; Similar to Rhizobium meliloti putative conserved membrane-anchored protein Smb21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 8.4e-39, 37.01% id in 3 [...] |
| BP1354 protein network | https://string-db.org/network/257313.BP1354 | Putative exported protein; Similar to Pseudomonas putida hypothetical 34.5 kDa protein in clcB-clcD intergenic region precursor SW:YCLC_PSEPU (Q47100) (329 aa) fasta scores: E(): 6.3e-30, 33.11% [...] |
| BP1355 protein network | https://string-db.org/network/257313.BP1355 | Probable LacI-family transcriptional regulator; Similar to Escherichia coli transcriptional repressor CytR or B3934 or Z5481 or Ecs4861 SW:CYTR_ECOLI (P06964) (341 aa) fasta scores: E(): 8.7e-25, [...] |
| leuD protein network | https://string-db.org/network/257313.BP1356 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Leu [...] |
| leuC protein network | https://string-db.org/network/257313.BP1358 | 3-isopropylmalate dehydratase large subunit (Pseudogene); GGGC in pertussis; GGGC(GGGCCGTCCGCTGGCGGGC) in parapertussis and bronchiseptica. |
| BP1359 protein network | https://string-db.org/network/257313.BP1359 | Putative mandelate racemase; Similar to Pseudomonas aeruginosa hypothetical protein Pa4041 TR:Q9HWY6 (EMBL:AE004821) (389 aa) fasta scores: E(): 1.7e-54, 43.97% id in 382 aa, and to Sulfolobus to [...] |
| BP1360 protein network | https://string-db.org/network/257313.BP1360 | Putative ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. |
| BP1361 protein network | https://string-db.org/network/257313.BP1361 | Transposase for IS481 element. |
| BP1362 protein network | https://string-db.org/network/257313.BP1362 | Similar to Rhizobium meliloti putative amino-acid ABC transporter ATP-binding protein Smc03894 TR:CAC47856 (EMBL:AL591793) (253 aa) fasta scores: E(): 1.3e-55, 69.91% id in 246 aa, and to Clostri [...] |
| BP1363 protein network | https://string-db.org/network/257313.BP1363 | Similar to Rhizobium meliloti putative amino-acid transport system permease ABC transporter protein Smc03893 TR:CAC47855 (EMBL:AL591793) (226 aa) fasta scores: E(): 1.2e-57, 71.3% id in 223 aa, a [...] |
| BP1364 protein network | https://string-db.org/network/257313.BP1364 | Similar to Rhizobium loti amino acid ABC transporter, periplasmic amino acid-binding protein Mll3861 TR:Q98FA8 (EMBL:AP003002) (267 aa) fasta scores: E(): 1.8e-58, 65.88% id in 255 aa, and to Clo [...] |
| BP1365 protein network | https://string-db.org/network/257313.BP1365 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| flhB protein network | https://string-db.org/network/257313.BP1366 | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of [...] |
| flhF protein network | https://string-db.org/network/257313.BP1370 | Flagellar biosynthesis protein FlhF (Pseudogene); (GC)4 in pertussis; (GC)5 in parapertussis and bronchiseptica. |
| flgM protein network | https://string-db.org/network/257313.BP1371 | Similar to Escherichia coli negative regulator of flagellin synthesis FlgM or B1071 SW:FLGM_ECOLI (P43532) (97 aa) fasta scores: E(): 0.0023, 37.36% id in 91 aa, and to Salmonella typhimurium neg [...] |
| flgA protein network | https://string-db.org/network/257313.BP1372 | Flagella basal body P-ring formation protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring ass [...] |
| flgB protein network | https://string-db.org/network/257313.BP1373 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. |
| flgC protein network | https://string-db.org/network/257313.BP1374 | Similar to Salmonella typhimurium flagellar basal-body rod protein FlgC or FlaW or Fla FIII SW:FLGC_SALTY (P16438) (134 aa) fasta scores: E(): 3.4e-31, 67.39% id in 138 aa, and to Yersinia entero [...] |
| flgD protein network | https://string-db.org/network/257313.BP1375 | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. |
| flgE protein network | https://string-db.org/network/257313.BP1376 | Similar to Salmonella typhimurium flagellar hook protein FlgE or FlaK or Fla FV SW:FLGE_SALTY (P16322) (402 aa) fasta scores: E(): 4e-24, 40.08% id in 479 aa, and to Escherichia coli flagellar ho [...] |
| flgF protein network | https://string-db.org/network/257313.BP1377 | Similar to Salmonella typhimurium flagellar basal-body rod protein FlgF or FlaX or Fla FVI SW:FLGF_SALTY (P16323) (251 aa) fasta scores: E(): 3.1e-34, 48.01% id in 252 aa, and to Escherichia coli [...] |
| flgG protein network | https://string-db.org/network/257313.BP1378 | Similar to Salmonella typhimurium flagellar basal-body rod protein FlgG or FlaL or Fla FVII SW:FLGG_SALTY (P16439) (260 aa) fasta scores: E(): 3.2e-60, 67.05% id in 261 aa, and to Escherichia col [...] |
| flgH protein network | https://string-db.org/network/257313.BP1379 | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. |
| flgI protein network | https://string-db.org/network/257313.BP1380 | Flagellar P-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. |
| flgJ protein network | https://string-db.org/network/257313.BP1381 | Peptidoglycan hydrolase; Similar to Salmonella typhimurium peptidoglycan hydrolase FlgJ or FlaZ or Fla FX SW:FLGJ_SALTY (P15931) (316 aa) fasta scores: E(): 3.9e-22, 42.58% id in 317 aa, and to E [...] |
| flgK protein network | https://string-db.org/network/257313.BP1382 | Similar to Salmonella typhimurium flagellar hook-associated protein 1 FlgK or FlaS or FlaW SW:FLGK_SALTY (P15932) (552 aa) fasta scores: E(): 1.2e-68, 40.32% id in 558 aa, and to Escherichia coli [...] |
| flgL protein network | https://string-db.org/network/257313.BP1383 | Flagellar hook-associated protein 3; Similar, over the N-terminal region, to Salmonella typhimurium flagellar hook-associated protein 3 FlgL or FlaT or FlaU SW:FLGL_SALTY (P16326) (317 aa) fasta [...] |
| tsr-2 protein network | https://string-db.org/network/257313.BP1384 | Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or Ched or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 1.4e-54, 46.18% id in 550 aa, and to Escherichia coli met [...] |
| tar protein network | https://string-db.org/network/257313.BP1385 | Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or B1886 SW:MCP2_ECOLI (P07017) (553 aa) fasta scores: E(): 1.8e-64, 45.36% id in 529 aa, and to Escherichia coli me [...] |
| fliR protein network | https://string-db.org/network/257313.BP1389 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. |
| fliQ protein network | https://string-db.org/network/257313.BP1390 | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. |
| fliP protein network | https://string-db.org/network/257313.BP1391 | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. |
| fliO protein network | https://string-db.org/network/257313.BP1392 | Flagellar protein FliO; Similar to Escherichia coli flagellar protein FliO or FlbD or FlaP or B1947 SW:FLIO_ECOLI (P22586) (121 aa) fasta scores: E(): 2.8e-06, 36.36% id in 110 aa, and to Salmone [...] |
| fliN protein network | https://string-db.org/network/257313.BP1393 | Similar to Escherichia coli flagellar motor switch protein FliN or MotD or FlaN or B1946 SW:FLIN_ECOLI (P15070) (137 aa) fasta scores: E(): 1.3e-23, 61.53% id in 130 aa, and to Salmonella typhimu [...] |
| fliM protein network | https://string-db.org/network/257313.BP1394 | Similar to Escherichia coli flagellar motor switch protein FliM or Fla AII or Fla QII or CheC2 or B1945 SW:FLIM_ECOLI (P06974) (334 aa) fasta scores: E(): 3.6e-66, 52.32% id in 323 aa, and to Sal [...] |
| fliL protein network | https://string-db.org/network/257313.BP1395 | Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. |
| fliJ protein network | https://string-db.org/network/257313.BP1399 | Flagellar protein FliJ; Similar to Escherichia coli flagellar protein FliJ or FlaO or FlaS or B1942 SW:FLIJ_ECOLI (P52613) (147 aa) fasta scores: E(): 5.2e-10, 33.1% id in 145 aa, and to Salmonel [...] |
| fliI protein network | https://string-db.org/network/257313.BP1400 | Similar to Escherichia coli flagellum-specific ATP synthase FliI or Fla AIII or FlaC or B1941 SW:FLII_ECOLI (P52612) (457 aa) fasta scores: E(): 4.1e-87, 64.95% id in 468 aa, and to Salmonella ty [...] |
| fliH protein network | https://string-db.org/network/257313.BP1401 | Similar to Escherichia coli flagellar assembly protein FliH or Fla BIII or Fla AII.3 or B1940 SW:FLIH_ECOLI (P31068) (228 aa) fasta scores: E(): 4.8e-14, 29.77% id in 225 aa, and to Salmonella ty [...] |
| fliG protein network | https://string-db.org/network/257313.BP1402 | Similar to Escherichia coli flagellar motor switch protein FliG or Fla BII or Fla AII.2 or b1939 or z3029 or ecs2678 SW:FLIG_ECOLI (P31067) (331 aa) fasta scores: E(): 1.7e-70, 61.39% id in 329 a [...] |
| fliF protein network | https://string-db.org/network/257313.BP1403 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. |
| fliE protein network | https://string-db.org/network/257313.BP1404 | Similar to Escherichia coli flagellar hook-basal body complex protein FliE or FlaN or Fla AI or B1937 or Z3027 or Ecs2676 SW:FLIE_ECOLI (P25797) (103 aa) fasta scores: E(): 3e-12, 47.22% id in 10 [...] |
| BP1405 protein network | https://string-db.org/network/257313.BP1405 | Hypothetical protein; No significant database matches. |
| BP1406 protein network | https://string-db.org/network/257313.BP1406 | Putative flagellar protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1473 TR:Q9I3N9 (EMBL:AE004576) (111 aa) fasta scores: E(): 2e-07, 43.18% id in 88 aa, and to Bacillus subtilis [...] |
| fliT protein network | https://string-db.org/network/257313.BP1408 | Hypothetical protein (Pseudogene); (CCAA)2 in pertussis; (CCAA)1 in parapertussis. |
| fliS protein network | https://string-db.org/network/257313.BP1409 | Flagellar protein FliS; Similar to Salmonella typhimurium flagellar protein FliS SW:FLIS_SALTY (P26609) (135 aa) fasta scores: E(): 4.5e-19, 47.86% id in 117 aa, and to Escherichia coli flagellar [...] |
| fliD protein network | https://string-db.org/network/257313.BP1410 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing fil [...] |
| flaG protein network | https://string-db.org/network/257313.BP1411 | Putative flagellar protein; Similar to Pseudomonas aeruginosa FlaG TR:O33420 (EMBL:L81176) (128 aa) fasta scores: E(): 0.033, 31.35% id in 118 aa, and to Riftia pachyptila endosymbiont FlaG TR:Q9 [...] |
| folC protein network | https://string-db.org/network/257313.BP1412 | Similar to Escherichia coli FolC bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] FolC or DedC or B2315 SW:FOLC_ECOLI (P08192) (422 aa) fasta scores: E(): 4 [...] |
| BP1413 protein network | https://string-db.org/network/257313.BP1413 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5052 TR:Q9HUC7 (EMBL:AE004918) (231 aa) fasta scores: E(): 0.00036, 35.71% id in 168 aa. |
| cvpA protein network | https://string-db.org/network/257313.BP1414 | Similar to Escherichia coli colicin V production protein CvpA or DedE or B2313 SW:CVPA_ECOLI (P08550) (162 aa) fasta scores: E(): 1.5e-10, 32.7% id in 159 aa, and to Pseudomonas aeruginosa hypoth [...] |
| purF protein network | https://string-db.org/network/257313.BP1415 | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine p [...] |
| dsbB protein network | https://string-db.org/network/257313.BP1416 | Similar to Escherichia coli disulfide bond formation protein B DsbB or RoxB or B1185 or Z1948 or Ecs1680 SW:DSBB_ECOLI (P30018) (176 aa) fasta scores: E(): 3.1e-05, 28.47% id in 144 aa, and to Ps [...] |
| glnD protein network | https://string-db.org/network/257313.BP1417 | Putative multiple antibiotic resistance protein (Pseudogene); Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status o [...] |
| map protein network | https://string-db.org/network/257313.BP1418 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharg [...] |
| rpsB protein network | https://string-db.org/network/257313.BP1419 | Similar to Escherichia coli 30S ribosomal protein S2 RpsB or B0169 or Z0180 or Ecs0171 SW:RS2_ECOLI (P02351) (240 aa) fasta scores: E(): 5.1e-52, 61.3% id in 230 aa, and to Spirulina platensis 30 [...] |
| tsf protein network | https://string-db.org/network/257313.BP1420 | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the [...] |
| pyrH protein network | https://string-db.org/network/257313.BP1421 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. |
| frr protein network | https://string-db.org/network/257313.BP1422 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...] |
| uppS protein network | https://string-db.org/network/257313.BP1423 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. |
| cdsA protein network | https://string-db.org/network/257313.BP1424 | Similar to Escherichia coli phosphatidate cytidylyltransferase CdsA or Cds or B0175 or Z0186 or Ecs0177 SW:CDSA_ECOLI (P06466) (249 aa) fasta scores: E(): 1.1e-15, 33.72% id in 255 aa, and to Hae [...] |
| dxr protein network | https://string-db.org/network/257313.BP1425 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...] |
| BP1426 protein network | https://string-db.org/network/257313.BP1426 | Similar to Escherichia coli inner membrane protein EcfE TR:AAL01378 (EMBL:AF407012) (450 aa) fasta scores: E(): 4e-55, 40.17% id in 448 aa, and to Pseudomonas aeruginosa hypothetical protein Pa36 [...] |
| bamA protein network | https://string-db.org/network/257313.BP1427 | Probable surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| BP1428 protein network | https://string-db.org/network/257313.BP1428 | Similar to Salmonella typhimurium outer membrane protein OmpH precursor OmpH SW:OMPH_SALTY (P16974) (161 aa) fasta scores: E(): 3.6e-06, 28.84% id in 156 aa, and to Neisseria meningitidis putativ [...] |
| lpxD protein network | https://string-db.org/network/257313.BP1429 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lip [...] |
| fabZ protein network | https://string-db.org/network/257313.BP1430 | (3R)-hydroxymyristol-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...] |
| lpxA protein network | https://string-db.org/network/257313.BP1431 | acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...] |
| lpxB protein network | https://string-db.org/network/257313.BP1432 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...] |
| rnhB protein network | https://string-db.org/network/257313.BP1433 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. |
| BP1434 protein network | https://string-db.org/network/257313.BP1434 | Similar to Neisseria meningitidis putative RNA methyltransferase Nma1351 TR:Q9JUE8 (EMBL:AL162755) (261 aa) fasta scores: E(): 7.7e-33, 42.91% id in 261 aa, and to Synechocystis sp hypothetical t [...] |
| BP1435 protein network | https://string-db.org/network/257313.BP1435 | Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/deph [...] |
| ppsA protein network | https://string-db.org/network/257313.BP1436 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. |
| BP1437 protein network | https://string-db.org/network/257313.BP1437 | Probable class-I glutamine amidotransferase; Similar to Xylella fastidiosa GMP synthase xf0560 TR:Q9PFU7 (EMBL:AE003903) (240 aa) fasta scores: E(): 7.8e-30, 46.15% id in 234 aa, and to Caulobact [...] |
| BP1438 protein network | https://string-db.org/network/257313.BP1438 | Putative membrane protein; Similar to Neisseria meningitidis putative membrane protein Nma1383 TR:Q9JUC5 (EMBL:AL162755) (135 aa) fasta scores: E(): 4e-06, 29.92% id in 137 aa, and to Mycobacteri [...] |
| BP1439 protein network | https://string-db.org/network/257313.BP1439 | Transposase for IS481 element. |
| BP1440 protein network | https://string-db.org/network/257313.BP1440 | Putative membrane protein; Similar to Rickettsia conorii hypothetical 34.0 kDa protein Rc0452 TR:AAL02990 (EMBL:AE008609) (312 aa) fasta scores: E(): 2.1e-55, 53.33% id in 300 aa, and to Neisseri [...] |
| BP1441 protein network | https://string-db.org/network/257313.BP1441 | Probable membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc01464 TR:CAC46726 (EMBL:AL591789) (426 aa) fasta scores: E(): 4.8e-25, 33.42% id in 377 aa, and to R [...] |
| smpB protein network | https://string-db.org/network/257313.BP1442 | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...] |
| BP1443 protein network | https://string-db.org/network/257313.BP1443 | Similar to Vibrio cholerae hypothetical protein Vc0849 SW:Y849_VIBCH (P52122) (144 aa) fasta scores: E(): 2.9e-24, 46.52% id in 144 aa, and to Escherichia coli hypothetical protein YfjG or B2619 [...] |
| BP1444 protein network | https://string-db.org/network/257313.BP1444 | Conserved hypothetical protein; Similar to Escherichia coli protein YfjF or B2618 SW:YFJF_ECOLI (P52119) (96 aa) fasta scores: E(): 9.8e-07, 43.52% id in 85 aa, and to Neisseria meningitidis hypo [...] |
| BP1445 protein network | https://string-db.org/network/257313.BP1445 | Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa0746 TR:Q9I5I3 (EMBL:AE004509) (387 aa) fasta scores: E(): 2.8e-92, 62.36% id in 380 aa, and to Caulobacter crescentus acyl-CoA [...] |
| BP1446 protein network | https://string-db.org/network/257313.BP1446 | enoly-CoA hydratase; Similar to Pseudomonas putida enoyl-coenzyme A hydratase TR:Q51969 (EMBL:U24215) (355 aa) fasta scores: E(): 1.9e-29, 38.66% id in 375 aa, and to Pseudomonas aeruginosa proba [...] |
| mmsB protein network | https://string-db.org/network/257313.BP1447 | Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB or Pa3569 SW:MMSB_PSEAE (P28811) (298 aa) fasta scores: E(): 4.2e-66, 67% id in 294 aa, and to Rhizobium loti 3-hydroxyis [...] |
| BP1448 protein network | https://string-db.org/network/257313.BP1448 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr6946 protein TR:Q987R7 (EMBL:AP003010) (171 aa) fasta scores: E(): 5.5e-18, 48.85% id in 131 aa, and to Agrobacterium tumefaciens Agr_ [...] |
| BP1449 protein network | https://string-db.org/network/257313.BP1449 | Putative membrane protein; Similar to Caulobacter crescentus nodulin-related protein Cc0717 TR:Q9AA89 (EMBL:AE005747) (233 aa) fasta scores: E(): 8.4e-38, 60.71% id in 224 aa, and to Rhizobium lo [...] |
| BP1450 protein network | https://string-db.org/network/257313.BP1450 | Transposase for IS481 element. |
| talB protein network | https://string-db.org/network/257313.BP1451 | Transaldolase B; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. |
| carA protein network | https://string-db.org/network/257313.BP1452 | Similar to Escherichia coli carbamoyl-phosphate synthase small chain CarA or PyrA or B0032 or Z0037 or Ecs0035 SW:CARA_ECOLI (P00907) (382 aa) fasta scores: E(): 6.1e-94, 65.02% id in 366 aa, and [...] |
| carB protein network | https://string-db.org/network/257313.BP1453 | Similar to Escherichia coli carbamoyl-phosphate synthase large chain CarB or PyrA or B0033 SW:CARB_ECOLI (P00968) (1072 aa) fasta scores: E(): 0, 68.42% id in 1080 aa, and to Neisseria meningitid [...] |
| gpmB protein network | https://string-db.org/network/257313.BP1455 | Probable short chain dehydrogenase (Pseudogene); (CG)3 in pertussis; (CG)4 in parapertussis and bronchiseptica. |
| BP1456 protein network | https://string-db.org/network/257313.BP1456 | LysR-family transcriptional regulator; Similar to the previously sequenced Bordetella pertussis Brg1 TR:O30441 (EMBL:AF006000) (291 aa) fasta scores: E(): 9.6e-14, 30.46% id in 302 aa, and to Nei [...] |
| BP1457 protein network | https://string-db.org/network/257313.BP1457 | Probable ATP-binding component of ABC transporter; Similar to Escherichia coli putrescine transport ATP-binding protein PotG or B0855 SW:POTG_ECOLI (P31134) (377 aa) fasta scores: E(): 4.2e-46, 4 [...] |
| BP1458 protein network | https://string-db.org/network/257313.BP1458 | Probable permease component of ABC transporter; Similar to Actinobacillus pleuropneumoniae ferric transport system permease protein AfuB SW:AFUB_ACTPL (Q44123) (687 aa) fasta scores: E(): 4.3e-38 [...] |
| BP1459 protein network | https://string-db.org/network/257313.BP1459 | Transposase for IS481 element. |
| aroC protein network | https://string-db.org/network/257313.BP1462 | Putative membrane protein (Pseudogene); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which [...] |
| BP1463 protein network | https://string-db.org/network/257313.BP1463 | Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein Pa4632 TR:Q9HVF9 (EMBL:AE004877) (273 aa) fasta scores: E(): 6.6e-50, 53% id in 266 aa, and to Vibrio cholerae hypothe [...] |
| mobB protein network | https://string-db.org/network/257313.BP1464 | Similar to Escherichia coli molybdopterin-guanine dinucleotide biosynthesis protein B MobB or B3856 SW:MOBB_ECOLI (P32125) (174 aa) fasta scores: E(): 1.4e-19, 42.51% id in 167 aa, and to Rhizobi [...] |
| moeA protein network | https://string-db.org/network/257313.BP1465 | Molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. |
| mobA protein network | https://string-db.org/network/257313.BP1466 | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine din [...] |
| BP1467 protein network | https://string-db.org/network/257313.BP1467 | Putative iron sulfur binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. |
| BP1468 protein network | https://string-db.org/network/257313.BP1468 | Conserved hypothetical protein. |
| BP1469 protein network | https://string-db.org/network/257313.BP1469 | Conserved hypothetical protein. |
| BP1470 protein network | https://string-db.org/network/257313.BP1470 | Similar to Vibrio cholerae iron-sulfur cluster-binding protein Vc1516 TR:Q9KRW8 (EMBL:AE004230) (553 aa) fasta scores: E(): 7.7e-19, 35.92% id in 451 aa. |
| BP1471 protein network | https://string-db.org/network/257313.BP1471 | Conserved hypothetical protein; Similar to Vibrio cholerae chaperone, formate dehydrogenase-specific, putative Vc1515 TR:Q9KRW9 (EMBL:AE004230) (218 aa) fasta scores: E(): 1.1e-21, 43.54% id in 1 [...] |
| fdhA protein network | https://string-db.org/network/257313.BP1472 | Similar to Wolinella succinogenes formate dehydrogenase large subunit precursor FdhA TR:P28179 (EMBL:X54057) (939 aa) fasta scores: E(): 2.4e-89, 43.78% id in 973 aa, and to Campylobacter jejuni [...] |
| fdhB protein network | https://string-db.org/network/257313.BP1474 | Formate dehydrogenase iron-sulfur subunit (Pseudogene); ScanRegExp hit to PS00198, 4Fe-4S ferredoxins, iron-sulfur binding region signature. Confirmed by InterPro eMOTIF pattern match. |
| fdhC protein network | https://string-db.org/network/257313.BP1475 | Similar to Wolinella succinogenes formate dehydrogenase subunit C precursor FdhC TR:P28180 (EMBL:X54057) (306 aa) fasta scores: E(): 2.3e-08, 27.75% id in 245 aa, and to Vibrio cholerae formate d [...] |
| BP1476 protein network | https://string-db.org/network/257313.BP1476 | Putative exported protein; No significant database matches. |
| BP1477 protein network | https://string-db.org/network/257313.BP1477 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus formate dehydrogenase FdsR TR:Q9RBF7 (EMBL:AJ007718) (299 aa) fasta scores: E(): 5.6e-30, 39.23% id in 288 aa, and to Bacillus sub [...] |
| BP1479 protein network | https://string-db.org/network/257313.BP1479 | Putative permease component of ABC transporter (Pseudogene); (TG)2 in pertussis; (TG)1 in parapertussis and bronchiseptica; Belongs to the ABC transporter superfamily. |
| BP1480 protein network | https://string-db.org/network/257313.BP1480 | Putative exported protein; Similar to Eubacterium acidaminophilum extracellular tungstate binding protein precursor TupA TR:CAC40782 (EMBL:AJ291988) (286 aa) fasta scores: E(): 1e-40, 51.21% id i [...] |
| leuC-2 protein network | https://string-db.org/network/257313.BP1481 | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. |
| leuD-2 protein network | https://string-db.org/network/257313.BP1482 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Leu [...] |
| leuB protein network | https://string-db.org/network/257313.BP1483 | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...] |
| asd protein network | https://string-db.org/network/257313.BP1484 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...] |
| BP1485 protein network | https://string-db.org/network/257313.BP1485 | Putative membrane protein; Similar to The N-terminal region of Pseudomonas aeruginosa twitching motility protein FimV TR:O87015 (EMBL:U93274) (927 aa) fasta scores: E(): 4.1e-09, 28.87% id in 561 [...] |
| truA protein network | https://string-db.org/network/257313.BP1486 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. |
| smoM protein network | https://string-db.org/network/257313.BP1487 | Putative periplasmic solute-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. |
| BP1488 protein network | https://string-db.org/network/257313.BP1488 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04248 TR:CAC46497 (EMBL:AL591788) (191 aa) fasta scores: E(): 6.9e-34, 53.48% id in 172 aa, and to R [...] |
| BP1489 protein network | https://string-db.org/network/257313.BP1489 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04249 TR:CAC46498 (EMBL:AL591788) (597 aa) fasta scores: E(): 8.1e-127, 61.42% id in 560 aa, and to [...] |
| trpF protein network | https://string-db.org/network/257313.BP1490 | Similar to Pseudomonas aeruginosa N-(5'-phosphoribosyl)anthranilate isomerase TrpF or Pa3113 SW:TRPF_PSEAE (Q59649) (211 aa) fasta scores: E(): 1.2e-28, 49.52% id in 210 aa, and to Acinetobacter [...] |
| BP1491 protein network | https://string-db.org/network/257313.BP1491 | Transposase for IS481 element. |
| BP1492 protein network | https://string-db.org/network/257313.BP1492 | Hypothetical protein; Similar to the C-terminal regions of Salmonella typhimurium AdrA protein AdrA TR:Q9L401 (EMBL:AJ271071) (370 aa) fasta scores: E(): 8.8e-15, 34.71% id in 193 aa, and to Esch [...] |
| hemN protein network | https://string-db.org/network/257313.BP1495 | Oxygen-independent coproporphyrinogen III oxidase (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to The C-terminal regions of Alcaligenes eutrophus oxy [...] |
| BP1496 protein network | https://string-db.org/network/257313.BP1496 | Probable two-component response regulator; Similar to Escherichia coli capsular synthesis regulator component B RcsB or B2217 or Z3476 or Ecs3106 SW:RCSB_ECOLI (P14374) (216 aa) fasta scores: E() [...] |
| thrS protein network | https://string-db.org/network/257313.BP1497 | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor en [...] |
| infC protein network | https://string-db.org/network/257313.BP1498 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...] |
| gshB protein network | https://string-db.org/network/257313.BP1499 | Similar to Escherichia coli glutathione synthetase GshB or Gsh-II or B2947 SW:GSHB_ECOLI (P04425) (316 aa) fasta scores: E(): 8.5e-54, 46.77% id in 310 aa, and to Neisseria meningitidis glutathio [...] |
| BP1500 protein network | https://string-db.org/network/257313.BP1500 | Putative IIa component of sugar transport PTS system; Similar to Vibrio furnissii PTS permease for mannose subunit IIIman N terminal domain ManW TR:P96165 (EMBL:U65015) (146 aa) fasta scores: E() [...] |
| ptsH protein network | https://string-db.org/network/257313.BP1501 | Phosphocarrier protein HPr; Similar to Alcaligenes eutrophus phosphocarrier protein HPr PhbH SW:PTHP_ALCEU (P23537) (89 aa) fasta scores: E(): 1.6e-15, 57.3% id in 89 aa, and to Neisseria meningi [...] |
| ptsI protein network | https://string-db.org/network/257313.BP1502 | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...] |
| BP1503 protein network | https://string-db.org/network/257313.BP1503 | Conserved hypothetical protein; Similar to Homo sapiens proline rich peptide P-B precursor PbII TR:Q9UBN0 (EMBL:D29833) (79 aa) fasta scores: E(): 6.7, 38.59% id in 57 aa. |
| osmC protein network | https://string-db.org/network/257313.BP1505 | Osmotically inducible protein C (Pseudogene); (G)4 in pertussis; (G)2 in parapertussis and bronchiseptica. |
| BP1506 protein network | https://string-db.org/network/257313.BP1506 | Putative exported protein; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter, periplasmic amino acid- binding protein Dra0263 TR:Q9RYP6 (EMBL:AE001863) (424 aa) fasta s [...] |
| BP1507 protein network | https://string-db.org/network/257313.BP1507 | Putative extracellular solute-binding protein; Similar to Desulfitobacterium dehalogenans ABC transporter binding protein-like protein AabH TR:Q9APF8 (EMBL:AF299117) (269 aa) fasta scores: E(): 7 [...] |
| BP1508 protein network | https://string-db.org/network/257313.BP1508 | Putative inner membrane component of binding-protein-dependent transport system; Similar to Rhizobium meliloti putative amino acid ABC transporter permease protein Smb20429 TR:CAC48815 (EMBL:AL60 [...] |
| BP1509 protein network | https://string-db.org/network/257313.BP1509 | Putative inner membrane component of binding-protein-dependent transport system; Similar to Rhizobium meliloti putative amino acid ABC transporter permease protein Smb20430 TR:CAC48816 (EMBL:AL60 [...] |
| BP1510 protein network | https://string-db.org/network/257313.BP1510 | Similar to Rhizobium sp probable amino-acid ABC transporter ATP-binding protein Y4th SW:Y4TH_RHISN () (257 aa) fasta scores: E(): 2e-45, 54.29% id in 256 aa, and to Rhizobium meliloti putative am [...] |
| BP1511 protein network | https://string-db.org/network/257313.BP1511 | Transposase for IS481 element. |
| BP1512 protein network | https://string-db.org/network/257313.BP1512 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2706 TR:Q9I0D6 (EMBL:AE004698) (131 aa) fasta scores: E(): 2.7e-20, 48.06% id in 129 aa, and to Rhizobium loti Mll0824 protein TR:Q98LY2 ( [...] |
| BP1513 protein network | https://string-db.org/network/257313.BP1513 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganism [...] |
| BP1514 protein network | https://string-db.org/network/257313.BP1514 | Conserved hypothetical protein; Similar to Methylophilus methylotrophus putative regulatory protein FmdB SW:FMDB_METME () (112 aa) fasta scores: E(): 6.1e-09, 39.82% id in 113 aa, and to Caulobac [...] |
| BP1515 protein network | https://string-db.org/network/257313.BP1515 | Putative transporter protein; Similar to Streptococcus salivarius UreI TR:Q55052 (EMBL:AF042344) (171 aa) fasta scores: E(): 2e-18, 39.53% id in 172 aa, and to Pseudomonas aeruginosa putative tra [...] |
| fmdA protein network | https://string-db.org/network/257313.BP1516 | Formamidase; Similar to Methylophilus methylotrophus formamidase FmdA SW:FMDA_METME (Q50228) (407 aa) fasta scores: E(): 2e-125, 71.53% id in 397 aa, and to Emericella nidulans formamidase FmdS T [...] |
| BP1517 protein network | https://string-db.org/network/257313.BP1517 | Putative LuxR-family transcriptional regulator; Similar to Rhizobium loti Mll1934 protein TR:Q98JH9 (EMBL:AP002998) (390 aa) fasta scores: E(): 5.7e-09, 23.54% id in 361 aa, and to Agrobacterium [...] |
| BP1518 protein network | https://string-db.org/network/257313.BP1518 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4875 TR:Q9HUT8 (EMBL:AE004901) (98 aa) fasta scores: E(): 1.9e-18, 61.22% id in 98 aa, and to Deinococcus radiodurans hypothetical 12.2 kD [...] |
| fba protein network | https://string-db.org/network/257313.BP1519 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphat [...] |
| BP1520 protein network | https://string-db.org/network/257313.BP1520 | Similar to Caulobacter crescentus hypothetical protein Cc3092 TR:Q9A3V9 (EMBL:AE005972) (134 aa) fasta scores: E(): 4.2e-22, 46.97% id in 132 aa, and to Rhizobium loti Mlr0112 protein TR:Q98NJ4 ( [...] |
| purC protein network | https://string-db.org/network/257313.BP1521 | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Similar to Corynebacterium ammoniagenes 5'-phosphoribosyl-4-N-succinocarboxamide-5-amino imidazole synthetase PurC TR:Q9RHX2 (EMBL:AB0031 [...] |
| BP1522 protein network | https://string-db.org/network/257313.BP1522 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus hypothetical 10.9 kDa protein TR:Q9ZAL5 (EMBL:Y10831) (98 aa) fasta scores: E(): 1.1e-16, 71.93% id in 57 aa, and to Xylella fasti [...] |
| BP1523 protein network | https://string-db.org/network/257313.BP1523 | Putative DNA-binding protein; Similar to Alcaligenes eutrophus hypothetical 14.2 kDa protein TR:Q9ZAL4 (EMBL:Y10831) (133 aa) fasta scores: E(): 3.3e-41, 77.27% id in 132 aa, and to Xylella fasti [...] |
| BP1524 protein network | https://string-db.org/network/257313.BP1524 | Putative membrane protein; No significant database matches. |
| BP1525 protein network | https://string-db.org/network/257313.BP1525 | Putative membrane protein; Similar to Agrobacterium tumefaciens Agr_l_2587p TR:AAK89860 (EMBL:AE008329) (171 aa) fasta scores: E(): 0.96, 29.03% id in 155 aa. |
| purE protein network | https://string-db.org/network/257313.BP1526 | Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). |
| purK protein network | https://string-db.org/network/257313.BP1527 | Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide ( [...] |
| BP1528 protein network | https://string-db.org/network/257313.BP1528 | Conserved hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. |
| BP1529 protein network | https://string-db.org/network/257313.BP1529 | Similar to Escherichia coli putative amino-acid ABC transporter binding protein YhdW precursor YhdW or B3268 SW:YHDW_ECOLI (P45766) (341 aa) fasta scores: E(): 2.5e-70, 54.22% id in 343 aa, and t [...] |
| BP1530 protein network | https://string-db.org/network/257313.BP1530 | Putative transcriptional regulator; Similar to Pseudomonas putida PcaR protein TR:Q9R9T0 (EMBL:AJ252090) (291 aa) fasta scores: E(): 6.5e-21, 31.66% id in 240 aa, and to Pseudomonas aeruginosa tr [...] |
| BP1531 protein network | https://string-db.org/network/257313.BP1531 | Putative arginase; Similar to Pseudomonas aeruginosa agmatinase SpeB1 or Pa0288 TR:Q9I6K2 (EMBL:AE004466) (318 aa) fasta scores: E(): 5.2e-33, 39.8% id in 304 aa, and to Streptomyces coelicolor a [...] |
| BP1532 protein network | https://string-db.org/network/257313.BP1532 | Putative amino acid-binding periplasmic protein; Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or B1920 SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 3.8e-16 [...] |
| BP1533 protein network | https://string-db.org/network/257313.BP1533 | Putative inner membrane component of binding-protein-dependent transport system; Similar to Thermotoga maritima amino acid ABC transporter, permease protein Tm0592 TR:Q9WZ61 (EMBL:AE001734) (216 [...] |
| BP1534 protein network | https://string-db.org/network/257313.BP1534 | Similar to Escherichia coli hypothetical amino-acid ABC transporter ATP-binding protein YhdZ YhdZ or B3271 SW:YHDZ_ECOLI (P45769) (252 aa) fasta scores: E(): 1.5e-58, 66.93% id in 245 aa, and to [...] |
| BP1535 protein network | https://string-db.org/network/257313.BP1535 | Putative thiamine-pyrophosphate-requiring enzyme; Similar to Rhizobium loti acetolactate synthase I Mll3567 TR:Q98FY4 (EMBL:AP003002) (517 aa) fasta scores: E(): 3.9e-108, 59.38% id in 522 aa, an [...] |
| BP1536 protein network | https://string-db.org/network/257313.BP1536 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr2698 protein TR:Q98HV2 (EMBL:AP003000) (156 aa) fasta scores: E(): 2.3e-18, 42.75% id in 145 aa, and to Agrobacterium tumefaciens Agr_ [...] |
| gcdH protein network | https://string-db.org/network/257313.BP1537 | Similar to Mus musculus glutaryl-CoA dehydrogenase, mitochondrial precursor GcdH SW:GCDH_MOUSE (Q60759) (438 aa) fasta scores: E(): 3.4e-105, 65.99% id in 397 aa, and to Pseudomonas aeruginosa gl [...] |
| ilvG protein network | https://string-db.org/network/257313.BP1538 | Similar to Escherichia coli acetolactate synthase isozyme II large subunit IlvG or B3767 SW:ILVG_ECOLI (P00892) (548 aa) fasta scores: E(): 1.6e-49, 32.53% id in 544 aa, and to Rhizobium meliloti [...] |
| BP1539 protein network | https://string-db.org/network/257313.BP1539 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa0448 TR:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 3.2e-45, 44.33% id in 291 aa, and to Rhizobium meliloti probable [...] |
| xerD protein network | https://string-db.org/network/257313.BP1540 | Integrase/recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dime [...] |
| BP1541 protein network | https://string-db.org/network/257313.BP1541 | Similar to Burkholderia solanacearum conserved hypothetical protein Rsc2545 TR:CAD16252 (EMBL:AL646070) (163 aa) fasta scores: E(): 7.4e-44, 69.75% id in 162 aa, and to Neisseria meningitidis hyp [...] |
| BP1542 protein network | https://string-db.org/network/257313.BP1542 | Similar to Burkholderia solanacearum conserved hypothetical protein Rsc0416 TR:CAD13944 (EMBL:AL646059) (192 aa) fasta scores: E(): 1.1e-59, 77.6% id in 192 aa, and to Pseudomonas aeruginosa hypo [...] |
| BP1543 protein network | https://string-db.org/network/257313.BP1543 | Similar to Burkholderia solanacearum hypothetical protein Rsc0415 TR:CAD13943 (EMBL:AL646059) (134 aa) fasta scores: E(): 1.7e-32, 73.55% id in 121 aa, and to Agrobacterium tumefaciens Agr_l_852p [...] |
| BP1544 protein network | https://string-db.org/network/257313.BP1544 | Transposase for IS481 element. |
| pbpG protein network | https://string-db.org/network/257313.BP1545 | Probable D-alanyl-D-alanine carboxypeptidase; Similar to Escherichia coli penicillin-binding protein 7 precursor PbpG or B2134 SW:PBP7_ECOLI (P33364) (313 aa) fasta scores: E(): 3.1e-43, 49.81% i [...] |
| BP1545A protein network | https://string-db.org/network/257313.BP1545A | Hypothetical protein; No significant database matches. |
| BP1546 protein network | https://string-db.org/network/257313.BP1546 | Putative membrane protein; Similar to Pseudomonas aeruginosa probable MFS transporter Pa1286 TR:Q9I458 (EMBL:AE004558) (399 aa) fasta scores: E(): 9.9e-65, 49.61% id in 389 aa, and to Agrobacteri [...] |
| BP1547 protein network | https://string-db.org/network/257313.BP1547 | Conserved hypothetical protein; Weakly similar to Caulobacter crescentus hypothetical protein Cc3537 TR:Q9A2M0 (EMBL:AE006012) (996 aa) fasta scores: E(): 1.6e-09, 26.54% id in 859 aa. |
| BP1548 protein network | https://string-db.org/network/257313.BP1548 | Putative nuclease/helicase; Similar to Escherichia coli exodeoxyribonuclease V beta chain RecB or RorA or B2820 SW:EX5B_ECOLI (P08394) (1180 aa) fasta scores: E(): 0.0011, 23.34% id in 1118 aa, a [...] |
| dnaX protein network | https://string-db.org/network/257313.BP1549 | DNA polymerase III subunit Tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuc [...] |
| BP1550 protein network | https://string-db.org/network/257313.BP1550 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. |
| recR protein network | https://string-db.org/network/257313.BP1551 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. |
| BP1552 protein network | https://string-db.org/network/257313.BP1552 | Transposase for IS481 element. |
| BP1553 protein network | https://string-db.org/network/257313.BP1553 | Hypothetical protein; No significant database matches. |
| BP1554 protein network | https://string-db.org/network/257313.BP1554 | Hypothetical protein; No significant database matches. |
| BP1555 protein network | https://string-db.org/network/257313.BP1555 | Putative membrane protein; Similar to Salmonella typhimurium LT2 putative inner membrane protein Stm2486 TR:AAL21380 (EMBL:AE008812) (287 aa) fasta scores: E(): 1.1e-58, 54.16% id in 288 aa, and [...] |
| BP1556 protein network | https://string-db.org/network/257313.BP1556 | Similar to Neisseria meningitidis hypothetical protein Nmb0436 TR:Q9K0X0 (EMBL:AE002400) (213 aa) fasta scores: E(): 9.9e-40, 54.54% id in 209 aa, and to Pseudomonas aeruginosa hypothetical prote [...] |
| BP1557 protein network | https://string-db.org/network/257313.BP1557 | Transposase for IS481 element. |
| BP1558 protein network | https://string-db.org/network/257313.BP1558 | Putative exported protein; Similar to Rhizobium loti Mlr5529 protein TR:Q98BK7 (EMBL:AP003006) (367 aa) fasta scores: E(): 8.4e-57, 45.92% id in 368 aa, and to Agrobacterium tumefaciens Agr_c_487 [...] |
| BP1560 protein network | https://string-db.org/network/257313.BP1560 | Putative exported protein (Pseudogene); G(-) in pertussis; G(CCGCGCTGGCG) in bronchiseptica and parapertussis. |
| BP1561 protein network | https://string-db.org/network/257313.BP1561 | Putative exported protein; Similar to Rhizobium meliloti hypothetical signal peptide protein Smc00402 TR:CAC41759 (EMBL:AL591783) (426 aa) fasta scores: E(): 3e-56, 63.07% id in 436 aa, and to Ag [...] |
| BP1562 protein network | https://string-db.org/network/257313.BP1562 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3436 TR:Q9HYH0 (EMBL:AE004764) (185 aa) fasta scores: E(): 3e-32, 48.86% id in 176 aa, and to Deinococcus radio [...] |
| BP1563 protein network | https://string-db.org/network/257313.BP1563 | Similar to Pseudomonas putida chromate reductase ChrR TR:AAK56852 (EMBL:AF375641) (186 aa) fasta scores: E(): 5.4e-24, 42.13% id in 178 aa, and to Rhizobium loti Mlr0414 protein TR:Q98MW2 (EMBL:A [...] |
| BP1565 protein network | https://string-db.org/network/257313.BP1565 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 9.6 kDa protein Scm10.03 TR:Q9RCZ5 (EMBL:AL133469) (85 aa) fasta scores: E(): 9.8e-16, 59.15% id in 71 aa, and to R [...] |
| mutS protein network | https://string-db.org/network/257313.BP1566 | Mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. |
| BP1567 protein network | https://string-db.org/network/257313.BP1567 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2630 TR:Q9I0K8 (EMBL:AE004691) (389 aa) fasta scores: E(): 1.6e-40, 39.85% id in 409 aa, and to Escherichia coli hypothetical protein YcfD [...] |
| fim3 protein network | https://string-db.org/network/257313.BP1568 | Serotype 3 fimbrial subunit precursor; Bordetella pertussis is the causative agent of whooping cough. An essential step in the disease process is the attachment of the bacteria to the ciliated ep [...] |
| BP1569 protein network | https://string-db.org/network/257313.BP1569 | Putative lipoprotein; Similar to Burkholderia solanacearum probable transmembrane protein Rsc1146 TR:CAD14848 (EMBL:AL646062) (398 aa) fasta scores: E(): 8.6e-37, 41.99% id in 381 aa, and to Neis [...] |
| dapA protein network | https://string-db.org/network/257313.BP1570 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). |
| BP1572 protein network | https://string-db.org/network/257313.BP1572 | Conserved hypothetical protein (Pseudogene); Inverted repeat for IS481 element. |
| glnH protein network | https://string-db.org/network/257313.BP1573 | Similar to Escherichia coli glutamine-binding periplasmic protein precursor GlnH or B0811 or Z1033 or Ecs0889 SW:GLNH_ECOLI (P10344) (248 aa) fasta scores: E(): 4.6e-52, 60.81% id in 245 aa, and [...] |
| glnP protein network | https://string-db.org/network/257313.BP1574 | Similar to Escherichia coli, and glutamine transport system permease protein GlnP or B0810 or Z1032 or Ecs0888 SW:GLNP_ECOLI (P10345) (219 aa) fasta scores: E(): 5.6e-48, 60.9% id in 220 aa, and [...] |
| glnQ-2 protein network | https://string-db.org/network/257313.BP1575 | Similar to Escherichia coli glutamine transport ATP-binding protein GlnQ or B0809 SW:GLNQ_ECOLI (P10346) (240 aa) fasta scores: E(): 2.8e-58, 71.66% id in 240 aa, and to Salmonella typhimurium gl [...] |
| spoT protein network | https://string-db.org/network/257313.BP1576 | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cell [...] |
| rpoZ protein network | https://string-db.org/network/257313.BP1577 | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha [...] |
| gmK protein network | https://string-db.org/network/257313.BP1578 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. |
| BP1579 protein network | https://string-db.org/network/257313.BP1579 | Putative cytochrome C; Similar to Pseudomonas aeruginosa hypothetical protein Pa2481 TR:Q9I101 (EMBL:AE004676) (291 aa) fasta scores: E(): 2.4e-61, 58.8% id in 284 aa, and to Wolinella succinogen [...] |
| BP1580 protein network | https://string-db.org/network/257313.BP1580 | Probable cytochrome C; Similar to Thiobacillus ferrooxidans putative cytochrome C-552 diheme precursor CycA TR:Q9KIW6 (EMBL:AF220499) (260 aa) fasta scores: E(): 1e-14, 34.84% id in 221 aa, and t [...] |
| BP1581 protein network | https://string-db.org/network/257313.BP1581 | Similar to Streptomyces coelicolor putative oxidoreductase Scc75a.33 TR:Q9RKP1 (EMBL:AL133220) (263 aa) fasta scores: E(): 3.1e-58, 67.33% id in 248 aa, and to Rhizobium loti oxidoreductase Mll29 [...] |
| BP1582 protein network | https://string-db.org/network/257313.BP1582 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3472 TR:Q9HYD4 (EMBL:AE004768) (198 aa) fasta scores: E(): 3.5e-21, 42.22% id in 180 aa, and to Xylella fastidi [...] |
| amn protein network | https://string-db.org/network/257313.BP1583 | Putative nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. |
| BP1584 protein network | https://string-db.org/network/257313.BP1584 | Putative DNA-binding protein; Similar to Rickettsia conorii hypothetical protein Rc1223 TR:AAL03761 (EMBL:AE008669) (142 aa) fasta scores: E(): 4.2e-09, 42.35% id in 85 aa, and to Agrobacterium t [...] |
| BP1585 protein network | https://string-db.org/network/257313.BP1585 | Hypothetical protein; Similar to an internal region of EDTA-degrading bacterium BNC1 ribosomal protein L1 TR:Q9EVJ4 (EMBL:AF176664) (232 aa) fasta scores: E(): 1.1, 42.42% id in 33 aa. |
| BP1586 protein network | https://string-db.org/network/257313.BP1586 | Similar to Rickettsia conorii hypothetical protein Rc1222 TR:AAL03760 (EMBL:AE008669) (78 aa) fasta scores: E(): 0.0014, 40.9% id in 44 aa. |
| BP1587 protein network | https://string-db.org/network/257313.BP1587 | Conserved hypothetical protein; Similar to Escherichia coli protein YicC or B3644 SW:YICC_ECOLI (P23839) (287 aa) fasta scores: E(): 7e-13, 37.86% id in 309 aa, and to Pseudomonas aeruginosa hypo [...] |
| rph protein network | https://string-db.org/network/257313.BP1588 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucl [...] |
| BP1589 protein network | https://string-db.org/network/257313.BP1589 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 TR:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 3.3e-104, 63.9% id in 446 aa, and to Methanothermobacter thermautotrophicus con [...] |
| BP1590 protein network | https://string-db.org/network/257313.BP1590 | Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 TR:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 3.2e-53, 47.63% id in 296 aa, and to Acinetobacter lwoffii hypoth [...] |
| BP1591 protein network | https://string-db.org/network/257313.BP1591 | Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or B4355 SW:MCP1_ECOLI (P02942) (551 aa) fasta scores: E(): 2.2e-49, 39.74% id in 556 aa, and to Salmonella typhimuri [...] |
| BP1592 protein network | https://string-db.org/network/257313.BP1592 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3258 TR:Q9HYY2 (EMBL:AE004748) (601 aa) fasta scores: E(): 1.4e-72, 37.3% id in 571 aa, and to Agrobacterium tumefaciens Agr_c_1510p TR:AA [...] |
| BP1593 protein network | https://string-db.org/network/257313.BP1593 | Conserved hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine n [...] |
| BP1594 protein network | https://string-db.org/network/257313.BP1594 | Transposase for IS481 element. |
| BP1595 protein network | https://string-db.org/network/257313.BP1595 | Putative porphyrin oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] clust [...] |
| glnA protein network | https://string-db.org/network/257313.BP1596 | Similar to Escherichia coli glutamine synthetase GlnA or B3870 or Z5406 or Ecs4792 SW:GLNA_ECOLI (P06711) (468 aa) fasta scores: E(): 1.9e-129, 64.95% id in 468 aa, and to Herbaspirillum seropedi [...] |
| glnL protein network | https://string-db.org/network/257313.BP1597 | Similar to Escherichia coli nitrogen regulation protein NR(II) GlnL or NtrB or GlnR or B3869 or Z5405 or Ecs4791 SW:NTRB_ECOLI (P06712) (349 aa) fasta scores: E(): 2.4e-37, 41.42% id in 350 aa, a [...] |
| glnG protein network | https://string-db.org/network/257313.BP1598 | Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Pho [...] |
| BP1599 protein network | https://string-db.org/network/257313.BP1599 | Similar to Escherichia coli hypothetical transcriptional regulator YeeY or B2015 SW:YEEY_ECOLI (P76369) (309 aa) fasta scores: E(): 5.6e-33, 39.38% id in 292 aa, and to Vibrio cholerae transcript [...] |
| BP1600 protein network | https://string-db.org/network/257313.BP1600 | Similar to Synechocystis sp hypothetical 25.7 kDa protein Sll1773 SW:YH73_SYNY3 (P73623) (232 aa) fasta scores: E(): 3.3e-52, 55.79% id in 233 aa, and to Escherichia coli protein YhhW or B3439 SW [...] |
| BP1601 protein network | https://string-db.org/network/257313.BP1601 | Conserved hypothetical protein; Similar to Rhizobium loti pirin-related protein Mlr7473 TR:Q985Y4 (EMBL:AP003011) (306 aa) fasta scores: E(): 1.1e-56, 51.74% id in 286 aa, and to Agrobacterium tu [...] |
| BP1604 protein network | https://string-db.org/network/257313.BP1604 | Probable ATP-binding component of ABC transporter (Pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| BP1605 protein network | https://string-db.org/network/257313.BP1605 | Similar to Neisseria gonorrhoeae major ferric iron binding protein precursor FbP SW:FBP_NEIGO (P17259) (330 aa) fasta scores: E(): 2.1e-13, 27.55% id in 352 aa, and to Agrobacterium tumefaciens A [...] |
| fpr protein network | https://string-db.org/network/257313.BP1606 | Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SW:FENR_AZOVI (Q44532) (257 aa) fasta scores: E(): 1.1e-70, 70.98% id in 255 aa, and to Pseudomonas aeruginosa ferredoxin--NADP+ r [...] |
| BP1607 protein network | https://string-db.org/network/257313.BP1607 | Similar to Yersinia pestis LysR-family regulatory protein Ypo0669 TR:CAC89523 (EMBL:AJ414144) (303 aa) fasta scores: E(): 3.9e-68, 63.14% id in 293 aa, and to Burkholderia solanacearum probable t [...] |
| DkgB protein network | https://string-db.org/network/257313.BP1609 | Putative membrane protein (Pseudogene); 25 bp deletion in pertussis relative to parapertussis following this codon. |
| BP1611 protein network | https://string-db.org/network/257313.BP1611 | Putative autotransporter (Pseudogene); ScanRegExp hit to PS00237, G-protein coupled receptors family 1 signature. |
| recG protein network | https://string-db.org/network/257313.BP1612 | ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding act [...] |
| BP1613 protein network | https://string-db.org/network/257313.BP1613 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa5344 TR:Q9HTL4 (EMBL:AE004946) (310 aa) fasta scores: E(): 7.8e-62, 54.15% id in 301 aa, and to Neisseria meningitidis trans [...] |
| BP1614 protein network | https://string-db.org/network/257313.BP1614 | Similar to Caulobacter crescentus transcriptional regulator, LysR family Cc1474 TR:Q9A889 (EMBL:AE005821) (298 aa) fasta scores: E(): 2.2e-30, 41.4% id in 256 aa, and to Rhizobium loti probable t [...] |
| BP1615 protein network | https://string-db.org/network/257313.BP1615 | Similar to Burkholderia solanacearum probable transmembrane aldehyde dehydrogenase oxidoreductase protein Rsp1055 TR:CAD18206 (EMBL:AL646082) (499 aa) fasta scores: E(): 3.7e-110, 61.27% id in 50 [...] |
| dps protein network | https://string-db.org/network/257313.BP1616 | Putative DNA-binding protein; Similar to Burkholderia solanacearum putative DNA protection during starvation or oxidative stress transcription regulator protein Dps TR:CAD16394 (EMBL:AL646071) (1 [...] |
| BP1617 protein network | https://string-db.org/network/257313.BP1617 | C-terminal region of a putative polysaccharide biosynthesis protein (partial); Pseudogene. This CDS is the C-terminal region of BP1618. |
| tviD protein network | https://string-db.org/network/257313.BP1618 | Putative N-terminal region of capsular polysaccharide biosynthesis protein (partial); Partial. The C-terminal region of this CDS is downstream and on the opposite orientation, BP1617. Similar (ov [...] |
| BP1619 protein network | https://string-db.org/network/257313.BP1619 | Hypothetical protein; No significant database matches. |
| BP1620 protein network | https://string-db.org/network/257313.BP1620 | Similar to Streptomyces coelicolor putative glycosyl transferase Scac2.02C TR:Q9F324 (EMBL:AL392189) (257 aa) fasta scores: E(): 9.4e-10, 27.08% id in 240 aa, and to Haemophilus influenzae putati [...] |
| kpsM protein network | https://string-db.org/network/257313.BP1623 | Similar to Escherichia coli polysialic acid transport protein KpsM SW:KPM2_ECOLI (P24584) (258 aa) fasta scores: E(): 1.3e-24, 31.49% id in 254 aa, and to Rhizobium meliloti putative cell surface [...] |
| kpsT protein network | https://string-db.org/network/257313.BP1624 | Similar to Escherichia coli polysialic acid transport ATP-binding protein KpsT SW:KST5_ECOLI (P24586) (224 aa) fasta scores: E(): 4.7e-25, 39.7% id in 204 aa, and to Pasteurella multocida HexA he [...] |
| kpsE protein network | https://string-db.org/network/257313.BP1625 | Similar to Escherichia coli capsule polysaccharide export inner-membrane protein KpsE SW:KSE5_ECOLI (P42214) (382 aa) fasta scores: E(): 2.8e-21, 26.74% id in 359 aa, and to Neisseria meningitidi [...] |
| wbpT protein network | https://string-db.org/network/257313.BP1626 | Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipC or TviE or Sty4656 SW:VIPC_SALTI (Q04975) (578 aa) fasta scores: E(): 5.7e-49, 33.15% id in 567 aa, and to Citrobacter freu [...] |
| vipC protein network | https://string-db.org/network/257313.BP1627 | Similar to Citrobacter freundii Vi biosynthesis protein VipC TR:Q9AP44 (EMBL:AF316551) (831 aa) fasta scores: E(): 2.5e-10, 23.73% id in 257 aa. |
| wza protein network | https://string-db.org/network/257313.BP1628 | Similar to Escherichia coli putative polysaccharide export protein Wza precursor Wza or B2062 or Z3227 or Ecs2867 SW:WZA_ECOLI (P76388) (379 aa) fasta scores: E(): 7.9e-23, 32.14% id in 364 aa, a [...] |
| wbpO protein network | https://string-db.org/network/257313.BP1629 | Capsular polysaccharide biosynthesis protein; Similar to Pseudomonas aeruginosa WbpO TR:Q9RHD7 (EMBL:AF035937) (422 aa) fasta scores: E(): 3.1e-132, 80.23% id in 420 aa, and to Plesiomonas shigel [...] |
| wbpP protein network | https://string-db.org/network/257313.BP1630 | Capsular polysaccharide biosynthesis protein; Similar to Pseudomonas aeruginosa WbpP TR:Q9RHD6 (EMBL:AF035937) (341 aa) fasta scores: E(): 9.9e-97, 69.79% id in 341 aa, and to Salmonella typhi Vi [...] |
| wcbA protein network | https://string-db.org/network/257313.BP1631 | Similar to Escherichia coli capsule polysaccharide export protein KpsC SW:KSC5_ECOLI (P42217) (675 aa) fasta scores: E(): 1.9e-87, 42.81% id in 689 aa, and to Pasteurella multocida LipA TR:Q9L9L5 [...] |
| wcbO protein network | https://string-db.org/network/257313.BP1633 | Capsular polysaccharide export protein (Pseudogene); Inverted repeat for IS481 element. |
| BP1635 protein network | https://string-db.org/network/257313.BP1635 | Putative membrane protein (Pseudogene); 4 probable transmembrane helices predicted for BP1634 by TMHMM2.0 at aa 40-62, 73-95, 108-130 and 145-167. |
| BP1636 protein network | https://string-db.org/network/257313.BP1636 | Similar to Rhizobium meliloti nonspecific acid phosphatase precursor NapE TR:AAK39518 (EMBL:AF354653) (334 aa) fasta scores: E(): 1.7e-72, 56.96% id in 323 aa. |
| BP1637 protein network | https://string-db.org/network/257313.BP1637 | Putative exported protein; No significant database matches. |
| BP1638 protein network | https://string-db.org/network/257313.BP1638 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3074 TR:Q9HZD4 (EMBL:AE004731) (586 aa) fasta scores: E(): 1.1e-15, 33.07% id in 508 aa, and to Vibrio cholerae hypothetical protein Vca01 [...] |
| BP1639 protein network | https://string-db.org/network/257313.BP1639 | Putative exported protein; Similar to Bacteroides fragilis BatA SWALL:Q9X4N3 (EMBL:AF116251) (327 aa) fasta scores: E(): 1.4e-13, 31.29% id in 262 aa, and to Pseudomonas aeruginosa hypothetical p [...] |
| BP1640 protein network | https://string-db.org/network/257313.BP1640 | Conserved hypothetical protein (pseudogene); (C)1 in pertussis; (C)2 in parapertussis and bronchiseptica. |
| BP1641 protein network | https://string-db.org/network/257313.BP1641 | Putative regulatory protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3070 TR:Q9HZD8 (EMBL:AE004731) (326 aa) fasta scores: E(): 4e-61, 54.85% id in 319 aa, and to Vibrio cholerae [...] |
| BP1643 protein network | https://string-db.org/network/257313.BP1643 | Putative exported protein (Pseudogene); Signal peptide predicted for BP1642 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.730 between residues 25 and 26. |
| BP1644 protein network | https://string-db.org/network/257313.BP1644 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.7e-47, 41.46% id in 328 aa, and to Agrobacterium tume [...] |
| BP1645 protein network | https://string-db.org/network/257313.BP1645 | Probable short-chain dehydrogenase; Similar to Mycobacterium tuberculosis dehydrogenase Rv2857c or Mtv003.03C TR:O33339 (EMBL:AL008883) (258 aa) fasta scores: E(): 2.7e-28, 40.47% id in 252 aa, a [...] |
| BP1646 protein network | https://string-db.org/network/257313.BP1646 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 2.6e-42, 54.27% id in 234 aa, and to Bacillus subtil [...] |
| BP1647 protein network | https://string-db.org/network/257313.BP1647 | Transposase for IS481 element. |
| livG-3 protein network | https://string-db.org/network/257313.BP1649 | Putative branched chain amino acid transport permease (Pseudogene); 2 probable transmembrane helices predicted for BP1648 by TMHMM2.0 at aa 5-27 and 32-54. |
| livF-3 protein network | https://string-db.org/network/257313.BP1650 | Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF or B3454 SW:LIVF_ECOLI (P22731) (237 aa) fasta scores: E(): 1.9e-34, 46.12% id in 232 aa, an [...] |
| BP1651 protein network | https://string-db.org/network/257313.BP1651 | Similar to Bacillus halodurans transcriptional regulator Bh2958 TR:Q9K8P5 (EMBL:AP001517) (215 aa) fasta scores: E(): 8e-09, 28.1% id in 185 aa, and to Pseudomonas fluorescens putative transcript [...] |
| BP1652 protein network | https://string-db.org/network/257313.BP1652 | Putative oxidoreductase (Partial); Partial CDS, it lacks the N-terminal region. Similar to Pseudomonas putida putidaredoxin reductase camA SW:CAMA_PSEPU (P16640) (422 aa) fasta scores: E(): 5.1e- [...] |
| wcbQ protein network | https://string-db.org/network/257313.BP1654 | Similar to Rhizobium meliloti capsular polysaccharide biosynthesis protein RkpI or R00574 or smc02270 SW:RKPI_RHIME (Q52938) (538 aa) fasta scores: E(): 1.9e-18, 29.24% id in 489 aa, and to Burkh [...] |
| wcbP protein network | https://string-db.org/network/257313.BP1655 | Putative oxidoreductase; Similar to Myxococcus xanthus hypothetical oxidoreductase in uraA 5'region SW:YURA_MYXXA (P25970) (258 aa) fasta scores: E(): 1.4e-15, 39.35% id in 216 aa, and to Burkhol [...] |
| BP1656 protein network | https://string-db.org/network/257313.BP1656 | Transposase for IS481 element. |
| BP1657 protein network | https://string-db.org/network/257313.BP1657 | Putative exported protein (Pseudogene); No significant database matches. |
| BP1658 protein network | https://string-db.org/network/257313.BP1658 | Probable two-component sensor histidine kinase; The C-terminal region of this CDS is Similar to Deinococcus radiodurans sensor histidine kinase Dr0577 TR:Q9RWT8 (EMBL:AE001916) (590 aa) fasta sco [...] |
| BP1659 protein network | https://string-db.org/network/257313.BP1659 | Similar to Streptomyces reticuli response regulatory protein SenR TR:Q9RIM0 (EMBL:Y14336) (217 aa) fasta scores: E(): 1.8e-15, 34.52% id in 223 aa, and to Streptomyces coelicolor AbsA2 or Sce8.19 [...] |
| sphB2 protein network | https://string-db.org/network/257313.BP1660 | Autotransporter; Sequence contains 6 Ns. to be corrected. |
| BP1662 protein network | https://string-db.org/network/257313.BP1662 | Putative DNA-binding protein; Similar to Vibrio cholerae hypothetical protein Vca0469 TR:Q9KMA5 (EMBL:AE004379) (104 aa) fasta scores: E(): 7.4e-05, 33.69% id in 92 aa, and to Agrobacterium tumef [...] |
| BP1663 protein network | https://string-db.org/network/257313.BP1663 | Conserved hypothetical protein (partial); Partial CDS (lacking the N-terminal region). Similar to Vibrio cholerae hypothetical protein Vca0468 TR:Q9KMA6 (EMBL:AE004379) (110 aa) fasta scores: E() [...] |
| gst protein network | https://string-db.org/network/257313.BP1664 | Similar to Escherichia coli glutathione S-transferase Gst or B1635 or Z2647 or Ecs2344 SW:GT_ECOLI (P39100) (201 aa) fasta scores: E(): 8.3e-17, 34.15% id in 202 aa, and to Rhizobium meliloti put [...] |
| tfdA protein network | https://string-db.org/network/257313.BP1665 | Similar to Alcaligenes eutrophus alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase TfdA SW:TFDA_ALCEU (P10088) (287 aa) fasta scores: E(): 3.2e-37, 43.21% id in 280 aa, and to [...] |
| BP1666 protein network | https://string-db.org/network/257313.BP1666 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2115 TR:Q9I200 (EMBL:AE004639) (317 aa) fasta scores: E(): 2.2e-09, 22.48% id in 298 aa, and to Rhizobium meliloti LysR fami [...] |
| BP1667 protein network | https://string-db.org/network/257313.BP1667 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.3e-37, 36.66% id in 300 aa, and to Pseudomonas putida [...] |
| BP1668 protein network | https://string-db.org/network/257313.BP1668 | Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa5524 TR:Q9HT49 (EMBL:AE004965) (260 aa) fasta scores: E(): 1.6e-22, 38.43% id in 255 aa, and to Streptomyces cinnamonensis m [...] |
| lldA protein network | https://string-db.org/network/257313.BP1669 | Similar to Neisseria meningitidis lactate dehydrogenase LldA or Nmb1377 TR:Q51135 (EMBL:U58911) (390 aa) fasta scores: E(): 3.4e-45, 36.05% id in 380 aa, and to Pseudomonas aeruginosa L-lactate d [...] |
| BP1670 protein network | https://string-db.org/network/257313.BP1670 | Putative hydrolase; Similar to Burkholderia solanacearum conserved hypothetical protein Rsc1824 TR:CAD15526 (EMBL:AL646066) (319 aa) fasta scores: E(): 1.8e-19, 35.39% id in 308 aa. |
| BP1671 protein network | https://string-db.org/network/257313.BP1671 | Probable short chain dehydrogenase; Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 1.2e-07, 27.23% id in 2 [...] |
| fabG-2 protein network | https://string-db.org/network/257313.BP1672 | Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 7.6e-21, 34.69% id in 245 aa, and to Agrobacterium tumefaci [...] |
| BP1673 protein network | https://string-db.org/network/257313.BP1673 | Putative exported protein; Similar to Variovorax paradoxus 2,4-diphenoxyacetic acid gene cluster TR:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.9e-39, 38.8% id in 317 aa, and to Pseudomo [...] |
| BP1674 protein network | https://string-db.org/network/257313.BP1674 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2206 TR:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 5.9e-19, 28.85% id in 305 aa, and to Burkholderia solanacearum pr [...] |
| BP1675 protein network | https://string-db.org/network/257313.BP1675 | Putative exported protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.8e-32, 34.47% id in 322 aa, and to Alcaligenes eutrophus hypothet [...] |
| BP1678 protein network | https://string-db.org/network/257313.BP1678 | Hypothetical protein (Pseudogene); There is ~100 bp deletion in pertussis and parapertussis and bronchiseptica. |
| arsH protein network | https://string-db.org/network/257313.BP1680 | Putative LysR-family transcriptional regulator (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to the C-terminal region of Burkholderia solanacearum con [...] |
| arsC-2 protein network | https://string-db.org/network/257313.BP1682 | Arsenate reductase (Pseudogene); TAG stop in pertussis; GAG in parapertussis and bronchiseptica. |
| BP1683 protein network | https://string-db.org/network/257313.BP1683 | Putative transcriptional regulator; Similar to Thiobacillus ferrooxidans ArsR-like protein TR:Q9L9D2 (EMBL:AF173880) (118 aa) fasta scores: E(): 1.3e-11, 45.09% id in 102 aa, and to Caulobacter c [...] |
| BP1685 protein network | https://string-db.org/network/257313.BP1685 | Conserved hypothetical protein (Pseudogene); (G)6 in pertussis; (G)4 in parapertussis and bronchiseptica. There is also a large deletion in pertussis, relative to parapertussis and bronchiseptica [...] |
| BP1686 protein network | https://string-db.org/network/257313.BP1686 | Probable short-chain dehydrogenase; Similar to Pseudomonas abietaniphila DitG TR:Q9X4X1 (EMBL:AF119621) (244 aa) fasta scores: E(): 1.9e-35, 50.22% id in 227 aa, and to Rhizobium loti short-chain [...] |
| BP1687 protein network | https://string-db.org/network/257313.BP1687 | LysR-family transcriptional regulator; Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ SW:PCAQ_AGRTU (P52668) (311 aa) fasta scores: E(): 9.2e-13, 27.55% id in 294 [...] |
| BP1688 protein network | https://string-db.org/network/257313.BP1688 | Putative membrane protein; Similar to Drosophila melanogaster Cg13065 protein TR:Q9VV13 (EMBL:AE003528) (140 aa) fasta scores: E(): 2.2, 39.53% id in 86 aa, and to Streptomyces coelicolor hypothe [...] |
| BP1689 protein network | https://string-db.org/network/257313.BP1689 | Transposase for IS481 element. |
| phaA protein network | https://string-db.org/network/257313.BP1691 | Putative exported protein (Pseudogene); PS00013 Prokaryotic membrane lipoprotein lipid attachment site. |
| phaC protein network | https://string-db.org/network/257313.BP1692 | Similar to Rhizobium meliloti pH adaptation potassium efflux system C transmembrane protein PhaC TR:CAC47490 (EMBL:X93358) (115 aa) fasta scores: E(): 3e-27, 72.97% id in 111 aa, and to Rhodobact [...] |
| phaD protein network | https://string-db.org/network/257313.BP1693 | Putative pH adaptation potassium efflux protein; Similar to Rhizobium meliloti PhaD protein TR:Q52981 (EMBL:X93358) (547 aa) fasta scores: E(): 6e-96, 52.33% id in 535 aa, and to Agrobacterium tu [...] |
| phaE protein network | https://string-db.org/network/257313.BP1694 | Putative pH adaptation potassium efflux protein; Similar to Rhizobium meliloti PhaE protein TR:Q52982 (EMBL:X93358) (161 aa) fasta scores: E(): 1.9e-18, 39.26% id in 163 aa, and to Agrobacterium [...] |
| phaF protein network | https://string-db.org/network/257313.BP1695 | Similar to Rhizobium meliloti pH adaptation potassium efflux system protein F PhaF or PhaF1 or R02914 or Smc03183 SW:PHAF_RHIME (Q52983) (92 aa) fasta scores: E(): 4.3e-16, 54.34% id in 92 aa, an [...] |
| phaG protein network | https://string-db.org/network/257313.BP1696 | Putative pH adaptation potassium efflux protein; Similar to Rhizobium meliloti PhaG protein TR:CAC47494 (EMBL:X93358) (121 aa) fasta scores: E(): 6.7e-11, 44.89% id in 98 aa, and to Rhodobacter c [...] |
| BP1697 protein network | https://string-db.org/network/257313.BP1697 | Transposase for IS481 element. |
| BP1698 protein network | https://string-db.org/network/257313.BP1698 | Putative exported protein; No significant database matches. |
| BP1699 protein network | https://string-db.org/network/257313.BP1699 | Similar to Borrelia burgdorferi hypothetical protein Bb0007 SW:Y007_BORBU (O51040) (285 aa) fasta scores: E(): 7.4e-16, 26.31% id in 285 aa. |
| cumB protein network | https://string-db.org/network/257313.BP1700 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. |
| ldcA-2 protein network | https://string-db.org/network/257313.BP1701 | Similar to Escherichia coli muramoyltetrapeptide carboxypeptidase LdcA or B1192 SW:LDCA_ECOLI (P76008) (304 aa) fasta scores: E(): 2.6e-36, 40% id in 300 aa, and to Neisseria meningitidis hypothe [...] |
| BP1702 protein network | https://string-db.org/network/257313.BP1702 | Similar to Pseudomonas aeruginosa probable enoyl-CoA hydratase/isomerase Pa2013 TR:Q9I298 (EMBL:AE004627) (265 aa) fasta scores: E(): 2.1e-37, 41.06% id in 263 aa, and to Caulobacter crescentus e [...] |
| BP1703 protein network | https://string-db.org/network/257313.BP1703 | Putative membrane protein; Similar to Rhizobium meliloti putative transmembrane protein Smc04283 TR:CAC46625 (EMBL:AL591789) (579 aa) fasta scores: E(): 3.8e-49, 49.83% id in 610 aa. |
| BP1704 protein network | https://string-db.org/network/257313.BP1704 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein Smc04287 TR:CAC46626 (EMBL:AL591789) (233 aa) fasta scores: E(): 5e-40, 52.63% id in 209 aa, and to Rhi [...] |
| BP1705 protein network | https://string-db.org/network/257313.BP1705 | Putative exported protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. |
| BP1706 protein network | https://string-db.org/network/257313.BP1706 | Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc1453 TR:CAD15155 (EMBL:AL646064) (540 aa) fasta scores: E(): 1.2e-125, 72.5% id in 542 aa, and to Escherichia col [...] |
| BP1707 protein network | https://string-db.org/network/257313.BP1707 | Similar to Streptomyces coelicolor putative ABC-transport protein, ATP-binding component Sc8g12.21 TR:Q9KYY4 (EMBL:AL355753) (270 aa) fasta scores: E(): 4.4e-32, 49.52% id in 212 aa, and to Pseud [...] |
| BP1708 protein network | https://string-db.org/network/257313.BP1708 | Putative exported protein; Similar to Methanobacterium bryantii copper response extracellular protein TR:Q48929 (EMBL:U40213) (353 aa) fasta scores: E(): 1.3e-14, 29.32% id in 266 aa, and to Dein [...] |
| BP1709 protein network | https://string-db.org/network/257313.BP1709 | Similar to Pseudomonas aeruginosa probable permease of ABC transporter Pa3448 TR:Q9HYF8 (EMBL:AE004765) (274 aa) fasta scores: E(): 2.7e-18, 35.4% id in 257 aa, and to Streptomyces coelicolor put [...] |
| BP1711 protein network | https://string-db.org/network/257313.BP1711 | Putative substrate-binding protein (Pseudogene); Inverted repeat for IS481 element. |
| BP1712 protein network | https://string-db.org/network/257313.BP1712 | Similar to Rhizobium meliloti hypothetical protein Smc01701 TR:CAC41902 (EMBL:AL591783) (194 aa) fasta scores: E(): 1.3e-36, 54.01% id in 187 aa, and to Pseudomonas aeruginosa hypothetical protei [...] |
| trxC protein network | https://string-db.org/network/257313.BP1713 | Thioredoxin 2; Similar to Escherichia coli thioredoxin 2 TrxC or B2582 or Z3867 or Ecs3448 SW:THI2_ECOLI (P33636) (139 aa) fasta scores: E(): 2.2e-13, 51.28% id in 78 aa, and to Streptomyces coel [...] |
| BP1715 protein network | https://string-db.org/network/257313.BP1715 | Conserved hypothetical protein (Pseudogene); (GC)2 in pertussis; (GC)3(G) in parapertussis and bronchiseptica. |
| gcp protein network | https://string-db.org/network/257313.BP1716 | Probable glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer [...] |
| BP1717 protein network | https://string-db.org/network/257313.BP1717 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| plsY protein network | https://string-db.org/network/257313.BP1718 | Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-ph [...] |
| surE protein network | https://string-db.org/network/257313.BP1719 | Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. |
| pcm protein network | https://string-db.org/network/257313.BP1720 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl [...] |
| BP1721 protein network | https://string-db.org/network/257313.BP1721 | Putative peptidase; Similar to Escherichia coli lipoprotein NlpD precursor NlpD or B2742 SW:NLPD_ECOLI (P33648) (379 aa) fasta scores: E(): 2.2e-18, 39.39% id in 264 aa, and to Rhodocyclus gelati [...] |
| BP1722 protein network | https://string-db.org/network/257313.BP1722 | Similar to Neisseria meningitidis hypothetical protein Nma1628 TR:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.4e-60, 55.89% id in 263 aa, and to Campylobacter jejuni hypothetical protein [...] |
| BP1723 protein network | https://string-db.org/network/257313.BP1723 | Putative exported protein; Weakly similar to Epiphyas postvittana apolipophorin-iii-like protein TR:Q9GPN5 (EMBL:AF314181) (186 aa) fasta scores: E(): 5.3, 22.89% id in 166 aa. |
| BP1724 protein network | https://string-db.org/network/257313.BP1724 | Putative exported protein; Similar to Ralstonia solanacearum probable signal peptide protein Rsc0341 TR:CAD13869 (EMBL:AL646058) (268 aa) fasta scores: E(): 3.5e-18, 37.9% id in 277 aa, and to Ca [...] |
| rlmD protein network | https://string-db.org/network/257313.BP1725 | Conserved hypothetical protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U [...] |
| BP1726 protein network | https://string-db.org/network/257313.BP1726 | MerR-family transcriptional regulator; Similar to Rhizobium meliloti heavy metal dependent transcription regulator HmrR SW:HMRR_RHIME (Q9X5X4) (147 aa) fasta scores: E(): 1.2e-35, 71.53% id in 13 [...] |
| BP1727 protein network | https://string-db.org/network/257313.BP1727 | Putative exported protein; Similar to Pseudomonas syringae OrfH protein TR:Q9KWM7 (EMBL:AB033420) (65 aa) fasta scores: E(): 2.9e-05, 43.54% id in 62 aa, and to Agrobacterium tumefaciens strC58 A [...] |
| BP1728 protein network | https://string-db.org/network/257313.BP1728 | Putative glutaredoxin; Similar to Vibrio cholerae peroxiredoxin family protein/glutaredoxin Vc2637 TR:Q9KNU3 (EMBL:AE004330) (247 aa) fasta scores: E(): 3.4e-61, 65.14% id in 241 aa, and to Neiss [...] |
| BP1729 protein network | https://string-db.org/network/257313.BP1729 | Putative pyridine nucleotide-disulfide oxidoreductase; Similar to Halobacterium volcanii dihydrolipoamide dehydrogenase Lpd SW:DLDH_HALVO (Q04829) (474 aa) fasta scores: E(): 1.4e-30, 32.27% id i [...] |
| rlmJ protein network | https://string-db.org/network/257313.BP1730 | Conserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. |
| ugpQ protein network | https://string-db.org/network/257313.BP1731 | Similar to Escherichia coli glycerophosphoryl diester phosphodiesterase UgpQ or B3449 SW:UGPQ_ECOLI (P10908) (247 aa) fasta scores: E(): 4.5e-40, 47.73% id in 243 aa, and to Alcaligenes eutrophus [...] |
| ppiD protein network | https://string-db.org/network/257313.BP1732 | Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase D PpiD or B0441 SW:PPID_ECOLI (P77241) (623 aa) fasta scores: E(): 2.9e-17, 26.07% id in 652 aa, and to Pseudomonas aeruginosa pept [...] |
| tesA protein network | https://string-db.org/network/257313.BP1733 | Similar to Escherichia coli acyl-CoA thioesterase I precursor TesA or ApeA or PldC or B0494 SW:TESA_ECOLI (P29679) (208 aa) fasta scores: E(): 9.7e-24, 42.07% id in 183 aa, and to Pseudomonas aer [...] |
| BP1736 protein network | https://string-db.org/network/257313.BP1736 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa4739 TR:Q9HV60 (EMBL:AE004887) (114 aa) fasta scores: E(): 2.6e-06, 40.18% id in 107 aa, and to the N-terminal [...] |
| BP1737 protein network | https://string-db.org/network/257313.BP1737 | Putative membrane protein; Similar to Rhizobium loti Msr3702 protein TR:Q98FM7 (EMBL:AP003002) (54 aa) fasta scores: E(): 1.3e-08, 60.37% id in 53 aa, and to Pseudomonas aeruginosa hypothetical p [...] |
| BP1738 protein network | https://string-db.org/network/257313.BP1738 | Similar to Pseudomonas aeruginosa hypothetical protein Pa4738 TR:Q9HV61 (EMBL:AE004887) (65 aa) fasta scores: E(): 1.5e-13, 60.93% id in 64 aa, and to Escherichia coli protein YjbJ or B4045 or Z5 [...] |
| cphA protein network | https://string-db.org/network/257313.BP1739 | Cyanphycin synthetase; Similar to Synechococcus elongatus cyanphycin synthetase CphA TR:Q9F2I7 (EMBL:AJ288949) (896 aa) fasta scores: E(): 5.9e-113, 41.6% id in 870 aa, and to Cyanothece cyanophy [...] |
| cphA-2 protein network | https://string-db.org/network/257313.BP1740 | Similar to Cyanothece cyanophycin synthetase CphA TR:Q9KGY4 (EMBL:AF279247) (872 aa) fasta scores: E(): 1.9e-49, 37.54% id in 863 aa, and to Synechocystis sp cyanophycin synthetase CphA or Slr200 [...] |
| BP1743 protein network | https://string-db.org/network/257313.BP1743 | ScanRegExp hit to PS00211, ABC transporters family signature. Confirmed by InterPro eMOTIF pattern match. |
| BP1744 protein network | https://string-db.org/network/257313.BP1744 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3230 TR:Q9HZ10 (EMBL:AE004746) (374 aa) fasta scores: E(): 1e-64, 46.88% id in 369 aa, and to Ralstonia solanacearum conserved hypothetica [...] |
| BP1745 protein network | https://string-db.org/network/257313.BP1745 | Putative exported protein; Similar to Neisseria meningitidis hypothetical protein Nmb0621 TR:Q9K0H9 (EMBL:AE002417) (275 aa) fasta scores: E(): 6.4e-40, 53.94% id in 241 aa, and to Pasteurella mu [...] |
| BP1746 protein network | https://string-db.org/network/257313.BP1746 | Putative peptidoglycan-binding protein; Similar to Pseudomonas aeruginosa probable transglycolase Pa1171 TR:Q9I4G6 (EMBL:AE004547) (398 aa) fasta scores: E(): 2.8e-92, 62.46% id in 389 aa, and to [...] |
| BP1747 protein network | https://string-db.org/network/257313.BP1747 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3796 TR:Q9HXK1 (EMBL:AE004798) (195 aa) fasta scores: E(): 9.9e-12, 41.61% id in 149 aa, and to Escherichia coli hypothetical protein YidB [...] |
| BP1748 protein network | https://string-db.org/network/257313.BP1748 | Transposase for IS481 element. |
| BP1749 protein network | https://string-db.org/network/257313.BP1749 | Similar to Rhizobium loti transcriptional regulator Mll7935 TR:Q984M5 (EMBL:AP003013) (159 aa) fasta scores: E(): 1.9e-15, 36.42% id in 151 aa, and to Agrobacterium tumefaciens StrC58 Agr_c_1339p [...] |
| BP1750 protein network | https://string-db.org/network/257313.BP1750 | Putative membrane protein; Similar to Agrobacterium tumefaciens strC58 Agr_c_1338p TR:AAK86547 (EMBL:AE008008) (320 aa) fasta scores: E(): 1.6e-32, 33.44% id in 296 aa, and to Bacillus halodurans [...] |
| dfp protein network | https://string-db.org/network/257313.BP1751 | DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylc [...] |
| lspA protein network | https://string-db.org/network/257313.BP1752 | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. |
| ileS protein network | https://string-db.org/network/257313.BP1753 | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...] |
| ribF protein network | https://string-db.org/network/257313.BP1754 | Similar to Escherichia coli riboflavin biosynthesis protein RibF or B0025 or Z0029 or Ecs0028 SW:RIBF_ECOLI (P08391) (313 aa) fasta scores: E(): 4e-48, 47.49% id in 299 aa, and to Pseudomonas aer [...] |
| purN protein network | https://string-db.org/network/257313.BP1756 | Phosphoribosylglycinamide formyltransferase (Pseudogene); There is a ~140 bp deletion in pertussis, relative to parapertussis and bronchiseptica, following this codon; Belongs to the class I-like [...] |
| BP1757 protein network | https://string-db.org/network/257313.BP1757 | Transposase for IS481 element. |
| BP1757A protein network | https://string-db.org/network/257313.BP1757A | Putative exported protein; Similar to the N-terminal region of Escherichia coli PilL TR:AAL05516 (EMBL:AF399919) (357 aa) fasta scores: E(): 3.8, 33.01% id in 106 aa. |
| BP1758 protein network | https://string-db.org/network/257313.BP1758 | Probable fatty acid desaturase; Similar to Azotobacter vinelandii stearoyl-CoA desaturase TR:Q59162 (EMBL:U37517) (367 aa) fasta scores: E(): 7.8e-68, 47.7% id in 348 aa, and to Pseudomonas aerug [...] |
| uvrD protein network | https://string-db.org/network/257313.BP1759 | DNA helicase II; Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or B3813 SW:UVRD_ECOLI (P03018) (720 aa) fasta scores: E(): 1.3e-94, 46.5% id in 772 aa, and to Ne [...] |
| BP1760 protein network | https://string-db.org/network/257313.BP1760 | Putative exported protein; Similar to Pseudomonas aeruginosa probable siderophore receptor Pa1365 TR:Q9I3X9 (EMBL:AE004565) (813 aa) fasta scores: E(): 1.1e-08, 23.6% id in 771 aa, and to Escheri [...] |
| BP1761 protein network | https://string-db.org/network/257313.BP1761 | Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YheS or B3352 or Z4713 or Ecs4203 SW:YHES_ECOLI (P45535) (637 aa) fasta scores: E(): 2.4e-90, 50.31% id in 632 aa, and [...] |
| prmB protein network | https://string-db.org/network/257313.BP1762 | Putative adenine-specific methylase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfa [...] |
| dapE protein network | https://string-db.org/network/257313.BP1763 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in [...] |
| dapD protein network | https://string-db.org/network/257313.BP1764 | Identical to the previously sequenced Bordetella pertussis 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD SW:DAPD_BORPE (Q9ZEX2) (273 aa) fasta scores: E(): 2.3e-107, 100% id [...] |
| phg protein network | https://string-db.org/network/257313.BP1767 | Autotransporter; Identical to the previously sequenced Bordetella pertussis Phg protein TR:Q9Z5R3 (EMBL:AJ009835) (418 aa) fasta scores: E(): 1.6e-154, 100% id in 418 aa. |
| BP1768 protein network | https://string-db.org/network/257313.BP1768 | Putative membrane protein; No significant database matches. |
| BP1769 protein network | https://string-db.org/network/257313.BP1769 | Hypothetical protein; No significant database matches. |
| cspA-2 protein network | https://string-db.org/network/257313.BP1770 | Cold shock-like protein; Identical to the previously sequenced Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 3.4e-26, 100% id in 67 aa, and s [...] |
| BP1771 protein network | https://string-db.org/network/257313.BP1771 | Similar to Caulobacter crescentus hypothetical protein Cc2122 TR:Q9A6H2 (EMBL:AE005885) (187 aa) fasta scores: E(): 1.9e-37, 54.74% id in 179 aa, and to Rhizobium meliloti hypothetical protein Sm [...] |
| cspA-3 protein network | https://string-db.org/network/257313.BP1772 | Cold shock-like protein; Similar to Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 1.2e-15, 71.66% id in 60 aa, and to Escherichia coli cold s [...] |
| BP1773 protein network | https://string-db.org/network/257313.BP1773 | Putative membrane protein; Similar to Bradyrhizobium japonicum PipA TR:Q9L8L2 (EMBL:AF200320) (193 aa) fasta scores: E(): 1.6e-48, 76.16% id in 172 aa, and to Pasteurella multocida hypothetical p [...] |
| tig protein network | https://string-db.org/network/257313.BP1774 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...] |
| clpP protein network | https://string-db.org/network/257313.BP1775 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degrada [...] |
| clpX protein network | https://string-db.org/network/257313.BP1776 | ATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the abs [...] |
| lon protein network | https://string-db.org/network/257313.BP1777 | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...] |
| BP1778 protein network | https://string-db.org/network/257313.BP1778 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 5e-36, 43.19% id in 294 aa, and to Ralstonia solanacearum probabl [...] |
| BP1779 protein network | https://string-db.org/network/257313.BP1779 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0446 TR:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 7.6e-94, 56.71% id in 402 aa, and to Acinetobacter spNCIMB9871 L-carnitine dehy [...] |
| BP1780 protein network | https://string-db.org/network/257313.BP1780 | Putative exported protein; Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 6.8e-40, 39.93% id in 313 aa, and to Variovorax paradoxus, and 2,4- [...] |
| BP1781 protein network | https://string-db.org/network/257313.BP1781 | Conserved hypothetical protein; Similar to Rhizobium leguminosarum nodulation protein N NodN SW:NODN_RHILV (P08634) (161 aa) fasta scores: E(): 4e-18, 43.84% id in 130 aa, and to Mycobacterium tu [...] |
| BP1782 protein network | https://string-db.org/network/257313.BP1782 | Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 4e-24, 38.79% id in 250 aa, and to Caulobacter crescentus enoyl-CoA hydra [...] |
| BP1783 protein network | https://string-db.org/network/257313.BP1783 | Conserved hypothetical protein; Similar to Pyrococcus abyssi AcaC protein or Pab0908 TR:Q9UYY6 (EMBL:AJ248287) (134 aa) fasta scores: E(): 1.3e-05, 29.83% id in 124 aa, and to Archaeoglobus fulgi [...] |
| BP1784 protein network | https://string-db.org/network/257313.BP1784 | Putative thiolase; Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 7.5e-88, 60.31% id in 378 aa, and to Methanothermobacter the [...] |
| fabG-3 protein network | https://string-db.org/network/257313.BP1785 | Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.3e-24, 36.69% id in 248 aa, and to Thermotoga maritima 3- [...] |
| pcaI protein network | https://string-db.org/network/257313.BP1788 | HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, C-terminal domain. |
| pcaJ protein network | https://string-db.org/network/257313.BP1789 | Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SW:PCAJ_PSEPU (Q01104) (212 aa) fasta scores: E(): 8.3e-38, 52.45% id in 204 aa, and to Caulobacter crescentus 3-oxoadipa [...] |
| lexA protein network | https://string-db.org/network/257313.BP1794 | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causin [...] |
| tyrB protein network | https://string-db.org/network/257313.BP1795 | Similar to Escherichia coli aromatic-amino-acid aminotransferase TyrB or B4054 SW:TYRB_ECOLI (P04693) (397 aa) fasta scores: E(): 6.9e-78, 52.51% id in 398 aa, and to Pseudomonas aeruginosa aspar [...] |
| uvrB protein network | https://string-db.org/network/257313.BP1796 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abn [...] |
| ptpA protein network | https://string-db.org/network/257313.BP1797 | Similar to Streptomyces coelicolor low molecular weight protein-tyrosine-phosphatase PtpA or Scq11.04C SW:PTPA_STRCO (P53433) (164 aa) fasta scores: E(): 2.9e-20, 45.28% id in 159 aa, and to Pseu [...] |
| BP1798 protein network | https://string-db.org/network/257313.BP1798 | Putative DNA-binding protein; Similar to Ralstonia solanacearum conserved hypothetical protein Rsc1018 TR:CAD14720 (EMBL:AL646062) (193 aa) fasta scores: E(): 9.9e-42, 70.58% id in 170 aa, and to [...] |
| iscS protein network | https://string-db.org/network/257313.BP1799 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental [...] |
| iscU protein network | https://string-db.org/network/257313.BP1800 | [Fe-S] cluster formation/repair protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then [...] |
| iscA protein network | https://string-db.org/network/257313.BP1801 | [Fe-S] cluster formation/repair protein; Similar to Azotobacter vinelandii IscA TR:O31271 (EMBL:AF010139) (107 aa) fasta scores: E(): 1.5e-28, 68.22% id in 107 aa, and to Pseudomonas aeruginosa p [...] |
| hscB protein network | https://string-db.org/network/257313.BP1802 | Chaperone protein; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. |
| hscA protein network | https://string-db.org/network/257313.BP1803 | Chaperone protein; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. |
| fdx protein network | https://string-db.org/network/257313.BP1804 | Ferredoxin, 2Fe-2S; Similar to Escherichia coli ferredoxin, 2Fe-2S Fdx or B2525 or Z3792 or Ecs3391 TR:AAG57639 (EMBL:M88654) (111 aa) fasta scores: E(): 1.5e-28, 62.5% id in 112 aa, and to Neiss [...] |
| BP1805 protein network | https://string-db.org/network/257313.BP1805 | Conserved hypothetical protein; Similar to Azotobacter vinelandii hypothetical 7.9 kDa protein TR:O69223 (EMBL:AF010139) (68 aa) fasta scores: E(): 1.3e-14, 62.5% id in 64 aa, and to Neisseria me [...] |
| BP1806 protein network | https://string-db.org/network/257313.BP1806 | Hypothetical protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. |
| BP1807 protein network | https://string-db.org/network/257313.BP1807 | Transposase for IS481 element. |
| paaG protein network | https://string-db.org/network/257313.BP1808 | Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 2.3e-24, 38.79% id in 250 aa, and to Rhizobium meliloti putative enoyl-Co [...] |
| BP1809 protein network | https://string-db.org/network/257313.BP1809 | Transposase for IS481 element. |
| BP1810 protein network | https://string-db.org/network/257313.BP1810 | Transposase for IS481 element. |
| kdgT protein network | https://string-db.org/network/257313.BP1812 | 2-keto-3-deoxygluconate permease (Pseudogene); (T)2 in pertussis; (T)1 in parapertussis and bronchiseptica. |
| pdxA protein network | https://string-db.org/network/257313.BP1813 | Similar to Escherichia coli pyridoxal phosphate biosynthetic protein PdxA or B0052 SW:PDXA_ECOLI (P19624) (329 aa) fasta scores: E(): 1.2e-18, 31.7% id in 287 aa, and to Caulobacter crescentus py [...] |
| BP1814 protein network | https://string-db.org/network/257313.BP1814 | Probable GntR-family transcriptional regulator; Similar to Rhizobium meliloti putative transcription regulator protein Smc02340 TR:CAC47147 (EMBL:AL591791) (244 aa) fasta scores: E(): 3.8e-18, 33 [...] |
| BP1815 protein network | https://string-db.org/network/257313.BP1815 | Similar to Rhizobium meliloti hypothetical protein Smc02631 TR:CAC45671 (EMBL:AL591786) (283 aa) fasta scores: E(): 1e-13, 36.45% id in 288 aa, and to Streptomyces coelicolor conserved hypothetic [...] |
| panD protein network | https://string-db.org/network/257313.BP1816 | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. |
| ascD protein network | https://string-db.org/network/257313.BP1817 | Similar to Yersinia pestis and Y. pseudotuberculosis CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD or RfbI or Ypo3116 SW:ASCD_YERPE (P37911) (328 aa) fasta scores: E(): 1.1e [...] |
| dadA protein network | https://string-db.org/network/257313.BP1818 | Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR or B1189 or Z1952 or Ecs1684 SW:DADA_ECOLI (P29011) (432 aa) fasta scores: E(): 4.2e-68, 45.14% id in 412 aa, and [...] |
| ugpB-2 protein network | https://string-db.org/network/257313.BP1819 | Similar to Escherichia coli glycerol-3-phosphate-binding periplasmic protein precursor UgpB or B3453 or Z4822 or Ecs4299 SW:UGPB_ECOLI (P10904) (438 aa) fasta scores: E(): 5.3e-42, 30.76% id in 4 [...] |
| BP1820 protein network | https://string-db.org/network/257313.BP1820 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1998 TR:Q9I2B1 (EMBL:AE004626) (306 aa) fasta scores: E(): 4.7e-30, 36.3% id in 314 aa, and to Rhizobium loti transcriptiona [...] |
| BP1822 protein network | https://string-db.org/network/257313.BP1822 | Conserved hypothetical protein (Pseudogene); Stop codon in pertussis, parapertussis and bronchiseptica. According to Fasta hits there is no stop codon but a frameshift. |
| BP1823 protein network | https://string-db.org/network/257313.BP1823 | Similar to Rhizobium sp probable peptide ABC transporter periplasmic binding protein Y4tO precursor y4tO SW:Y4TO_RHISN (P55669) (531 aa) fasta scores: E(): 2e-70, 39.92% id in 521 aa, and to Brad [...] |
| BP1824 protein network | https://string-db.org/network/257313.BP1824 | Probable inner membrane component of binding-protein-dependent transport system; Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fas [...] |
| BP1825 protein network | https://string-db.org/network/257313.BP1825 | Probable probable inner membrane component of binding-protein-dependent transport system; Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tQ SW:Y4TQ_RHISN (Q53192) (29 [...] |
| BP1826 protein network | https://string-db.org/network/257313.BP1826 | Similar to Rhizobium meliloti probable ABC transporter, ATP-binding protein Sma1434 TR:AAK65441 (EMBL:AE007265) (550 aa) fasta scores: E(): 4.3e-80, 48.08% id in 549 aa, and to Pseudomonas aerugi [...] |
| BP1827 protein network | https://string-db.org/network/257313.BP1827 | Putative amidase; Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 2e-26, 32.39% id in 460 aa, and to Rhizobium meliloti putative amidase protein Smc02881 [...] |
| BP1829 protein network | https://string-db.org/network/257313.BP1829 | Putative lipoprotein (Pseudogene); 14 bp deletion in pertussis, relative to parapertussis and bronchiseptica, around this position. |
| BP1830 protein network | https://string-db.org/network/257313.BP1830 | Hypothetical protein; No significant database matches. |
| BP1831 protein network | https://string-db.org/network/257313.BP1831 | Hypothetical protein; The N-terminal region of this CDS is similar to Streptomyces coelicolor hypothetical 7.7 kDa protein Sc7h1.36C TR:O54195 (EMBL:AL021411) (81 aa) fasta scores: E(): 0.24, 45. [...] |
| BP1833 protein network | https://string-db.org/network/257313.BP1833 | Putative general secretion pathway protein (Pseudogene); 11 bp insertion in pertussis relative to parapertussis and bronchiseptica. |
| BP1834 protein network | https://string-db.org/network/257313.BP1834 | Putative fimbrial protein; Similar to Escherichia coli type IV prepilin PilS TR:O88170 (EMBL:AB007463) (204 aa) fasta scores: E(): 0.62, 24.49% id in 196 aa, and to Salmonella typhi PilS protein [...] |
| BP1835 protein network | https://string-db.org/network/257313.BP1835 | Putative exported protein; No significant database matches. |
| alaS protein network | https://string-db.org/network/257313.BP1836 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...] |
| BP1837 protein network | https://string-db.org/network/257313.BP1837 | Similar to Neisseria meningitidis hypothetical protein Nma0882 or Nmb0681 SW:Y882_NEIMA (Q9JR98) (74 aa) fasta scores: E(): 1.1e-10, 61.66% id in 60 aa, and to Pseudomonas aeruginosa hypothetical [...] |
| BP1838 protein network | https://string-db.org/network/257313.BP1838 | Putative exported protein; Weakly similar to Bacillus subtilis endoglucanase precursor TR:Q03882 (EMBL:M38634) (148 aa) fasta scores: E(): 4, 26.71% id in 131 aa. |
| rpsP protein network | https://string-db.org/network/257313.BP1839 | Similar to Escherichia coli 30S ribosomal protein S16 RpsP or B2609 or Z3903 or Ecs3472 SW:RS16_ECOLI (P02372) (82 aa) fasta scores: E(): 5.3e-17, 58.44% id in 77 aa, and to Ralstonia solanacearu [...] |
| rimM protein network | https://string-db.org/network/257313.BP1840 | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Ess [...] |
| trmD protein network | https://string-db.org/network/257313.BP1841 | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. |
| BP1842 protein network | https://string-db.org/network/257313.BP1842 | Probable class-V aminotransferase; Similar to Escherichia coli selenocysteine lyase CsdB or SufS or B1680 SW:CSDB_ECOLI (P77444) (406 aa) fasta scores: E(): 1.3e-18, 29.57% id in 355 aa, and to S [...] |
| BP1843 protein network | https://string-db.org/network/257313.BP1843 | Similar to Rhizobium meliloti hypothetical protein Smc02103 TR:CAC46072 (EMBL:AL591787) (154 aa) fasta scores: E(): 2.4e-22, 50% id in 156 aa, and to Agrobacterium tumefaciens strC58 Agr_c_2535p [...] |
| BP1844 protein network | https://string-db.org/network/257313.BP1844 | Transposase for IS481 element. |
| BP1845 protein network | https://string-db.org/network/257313.BP1845 | Conserved hypothetical protein; Similar to Escherichia coli unknown protein from 2D-PAGE YgfZ or B2898 SW:UP14_ECOLI (P39179) (325 aa) fasta scores: E(): 7.2e-17, 31.3% id in 345 aa, and to Pseud [...] |
| mltG protein network | https://string-db.org/network/257313.BP1846 | Putative exported protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. |
| tmk protein network | https://string-db.org/network/257313.BP1847 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. |
| holB protein network | https://string-db.org/network/257313.BP1848 | Similar to Escherichia coli DNA polymerase III, delta' subunit HolB or B1099 SW:HOLB_ECOLI (P28631) (334 aa) fasta scores: E(): 8e-10, 29.94% id in 354 aa, and to Neisseria meningitidis putative [...] |
| BP1849 protein network | https://string-db.org/network/257313.BP1849 | Similar to Neisseria meningitidis hypothetical protein Nmb0771 TR:Q9K050 (EMBL:AE002431) (259 aa) fasta scores: E(): 1.5e-44, 50% id in 252 aa, and to Vibrio cholerae hypothetical protein Vc2014 [...] |
| BP1850 protein network | https://string-db.org/network/257313.BP1850 | Putative exported protein; Similar to Chromatium vinosum ankyrin homolog precursor SW:ANKH_CHRVI (Q06527) (323 aa) fasta scores: E(): 3.1e-09, 32.87% id in 219 aa. |
| BP1851 protein network | https://string-db.org/network/257313.BP1851 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3174 TR:Q9HZ60 (EMBL:AE004741) (242 aa) fasta scores: E(): 1e-28, 41.77% id in 237 aa, and to Vibrio cholerae transcriptiona [...] |
| BP1852 protein network | https://string-db.org/network/257313.BP1852 | Similar to Escherichia coli glutamine-binding periplasmic protein precursor GlnH or B0811 or Z1033 or Ecs0889 SW:GLNH_ECOLI (P10344) (248 aa) fasta scores: E(): 5.1e-24, 36% id in 250 aa, and to [...] |
| glnQ-3 protein network | https://string-db.org/network/257313.BP1855 | Glutamine transport system permease (Pseudogene); 1 probable transmembrane helix predicted for BP1854 by TMHMM2.0 at aa 56-78. |
| gdhA-2 protein network | https://string-db.org/network/257313.BP1857 | Probable arginase (Pseudogene); ScanRegExp hit to PS01053, Arginase family signature 3; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. |
| amaB protein network | https://string-db.org/network/257313.BP1859 | ScanRegExp hit to PS00687, Aldehyde dehydrogenases glutamic acid active site. |
| ilvG-2 protein network | https://string-db.org/network/257313.BP1860 | Similar to Escherichia coli acetolactate synthase isozyme II large subunit IlvG or B3767 SW:ILVG_ECOLI (P00892) (548 aa) fasta scores: E(): 3.7e-41, 28.54% id in 522 aa, and to Rhizobium loti ace [...] |
| citE-2 protein network | https://string-db.org/network/257313.BP1861 | Similar to Escherichia coli citrate lyase beta chain CitE or B0616 SW:CILB_ECOLI (P77770) (302 aa) fasta scores: E(): 4.8e-19, 31.48% id in 289 aa, and to Salmonella enteritidis CitE TR:AAK97548 [...] |
| BP1862 protein network | https://string-db.org/network/257313.BP1862 | Putative membrane protein; Similar to Rhizobium meliloti putative C4-dicarboxylate transport system, permease large protein transmembrane Smb21436 TR:CAC49665 (EMBL:AL603646) (426 aa) fasta score [...] |
| BP1863 protein network | https://string-db.org/network/257313.BP1863 | Putative membrane protein; Similar to Rhizobium meliloti putative C4-dicarboxylate transport system, permease small protein transmembrane Smb21437 TR:CAC49666 (EMBL:AL603646) (186 aa) fasta score [...] |
| BP1864 protein network | https://string-db.org/network/257313.BP1864 | Putative exported protein; Similar to Rhizobium meliloti putative C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide Smb21438 TR:Q926B4 (EMBL:AL603646) ( [...] |
| BP1865 protein network | https://string-db.org/network/257313.BP1865 | Similar to Erwinia chrysanthemi exu regulon transcriptional regulator ExuR SW:EXUR_ERWCH (Q9X9E0) (259 aa) fasta scores: E(): 1.5e-19, 34.57% id in 214 aa, and to Rhizobium meliloti putative tran [...] |
| BP1866 protein network | https://string-db.org/network/257313.BP1866 | Transposase for IS481 element. |
| BP1874 protein network | https://string-db.org/network/257313.BP1874 | Hypothetical protein (Pseudogene); In-frame TAG stop codon in pertussis; CAG in parapertussis and bronchiseptica. |
| BP1875 protein network | https://string-db.org/network/257313.BP1875 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2116 TR:Q9I1Z9 (EMBL:AE004639) (265 aa) fasta scores: E(): 3e-59, 63.11% id in 244 aa, and to Bacillus subtilis hypothetical 28.1 kDa prot [...] |
| bvgR protein network | https://string-db.org/network/257313.BP1876 | Regulatory protein BvgR; Previously sequenced as Bordetella pertussis BvgR TR:O85677 (EMBL:AF071567) (291 aa) fasta scores: E(): 5.1e-121, 100% id in 291 aa. |
| bvgS protein network | https://string-db.org/network/257313.BP1877 | Virulence sensor protein; Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals. |
| bvgA protein network | https://string-db.org/network/257313.BP1878 | Virulence factors transcription regulator; Member of the two-component regulatory system BvgS/BvgA. Activates the transcription of virulence genes. |
| fhaB protein network | https://string-db.org/network/257313.BP1879 | Filamentous hemagglutinin/adhesin; Evidence for a role in host-cell binding and infection. |
| fimB protein network | https://string-db.org/network/257313.BP1881 | Fimbrial protein (pseudogene); Required for the biogenesis of the filamentous hemagglutinin and the fimbria; Belongs to the periplasmic pilus chaperone family. |
| fimC protein network | https://string-db.org/network/257313.BP1882 | Outer membrane usher protein precursor; Probable porin-like protein necessary for the assembly of a pilin-type protein; Belongs to the fimbrial export usher family. |
| fimD protein network | https://string-db.org/network/257313.BP1883 | Fimbrial adhesin; Previously sequenced as Bordetella pertussis protein FhaE precursor FhaE or FimD SW:FHAE_BORPE (Q00879) (376 aa) fasta scores: E(): 1.9e-143, 100% id in 365 aa. |
| fhaC protein network | https://string-db.org/network/257313.BP1884 | Hemolysin activator-like protein; Member of a two partner secretion pathway (TPS) in which it mediates the secretion of filamentous hemagglutinin FHA (fhaB). Belongs to the TPS (TC 1.B.20) family [...] |
| BP1886 protein network | https://string-db.org/network/257313.BP1886 | Conserved hypothetical protein (Pseudogene); CC in pertussis; (AC)CC in parapertussis and bronchiseptica. |
| BP1887 protein network | https://string-db.org/network/257313.BP1887 | Putative exported protein; Similar to Ralstonia solanacearum putative signal peptide protein Rsc2166 TR:CAD15873 (EMBL:AL646068) (339 aa) fasta scores: E(): 4.6e-38, 34.37% id in 320 aa, and to P [...] |
| BP1890 protein network | https://string-db.org/network/257313.BP1890 | Putative membrane protein (Pseudogene); Signal peptide predicted for BP1889 by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.485 between residues 30 and 31. |
| BP1891 protein network | https://string-db.org/network/257313.BP1891 | Putative exported protein; Similar to Ralstonia solanacearum putative signal peptide protein Rsc2510 TR:CAD16217 (EMBL:AL646070) (338 aa) fasta scores: E(): 3.2e-27, 30.15% id in 325 aa, and to S [...] |
| BP1892 protein network | https://string-db.org/network/257313.BP1892 | Conserved hypothetical protein; Similar to Agrobacterium tumefaciens strC58 Agr_l_563p TR:AAK88851 (EMBL:AE008228) (228 aa) fasta scores: E(): 1.7e-09, 29.25% id in 188 aa. |
| BP1894 protein network | https://string-db.org/network/257313.BP1894 | Putative LysR-family transcriptional regulator (Pseudogene); Predicted helix-turn-helix motif with score 1265 (+3.50 SD) at aa 16-37, sequence RSFKAAAGKLHLTQAAISGRIA. |
| oplaH protein network | https://string-db.org/network/257313.BP1895 | 5-oxoprolinase; Similar to Rattus norvegicus 5-oxoprolinase OplaH SW:OPLA_RAT (P97608) (1288 aa) fasta scores: E(): 3.5e-94, 45.17% id in 1264 aa, and to Rhizobium loti 5-oxoprolinase Mlr1573 TR: [...] |
| BP1896 protein network | https://string-db.org/network/257313.BP1896 | Similar to Ralstonia solanacearum conserved hypothetical protein Rsc1742 TR:CAD15444 (EMBL:AL646066) (350 aa) fasta scores: E(): 2.1e-57, 46.84% id in 333 aa, and to Emericella nidulans acyl-coen [...] |
| BP1898 protein network | https://string-db.org/network/257313.BP1898 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP1899 protein network | https://string-db.org/network/257313.BP1899 | Similar to Rhizobium meliloti putative transcription regulator protein Smc00263 TR:Q92PP5 (EMBL:AL591788) (282 aa) fasta scores: E(): 6.2e-22, 36.03% id in 247 aa, and to Rhizobium loti transcrip [...] |
| BP1900 protein network | https://string-db.org/network/257313.BP1900 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-55, 48.32% id in 329 aa, and to Agrobacterium tu [...] |
| BP1901 protein network | https://string-db.org/network/257313.BP1901 | Similar to Pseudomonas aeruginosa probable methyltransferase Pa3817 TR:Q9HXI5 (EMBL:AE004799) (257 aa) fasta scores: E(): 2.5e-30, 41.93% id in 248 aa, and to Azotobacter vinelandii hypothetical [...] |
| suhB protein network | https://string-db.org/network/257313.BP1902 | Inositol-1-monophosphatase; Similar to Escherichia coli extragenic suppressor protein SuhB or SsyA or b2533 SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.2e-41, 46.33% id in 259 aa, and to [...] |
| BP1903 protein network | https://string-db.org/network/257313.BP1903 | Putative membrane protein; Similar to Salmonella enterica subspenterica serovar Typhi putative membrane protein Sty1958 TR:CAD05511 (EMBL:AL627272) (519 aa) fasta scores: E(): 1e-110, 59.22% id i [...] |
| bacA protein network | https://string-db.org/network/257313.BP1904 | Bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. |
| lpxH protein network | https://string-db.org/network/257313.BP1905 | UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water [...] |
| ppiB protein network | https://string-db.org/network/257313.BP1906 | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclop [...] |
| BP1907 protein network | https://string-db.org/network/257313.BP1907 | Putative exported protein; Similar to Rhodobacter sphaeroides hypothetical 21.1 kDa protein putative Orf TR:Q53172 (EMBL:Z50182) (197 aa) fasta scores: E(): 0.41, 29.33% id in 150 aa, and to Desu [...] |
| cysS protein network | https://string-db.org/network/257313.BP1908 | Similar to Escherichia coli cysteinyl-tRNA synthetase CysS or B0526 SW:SYC_ECOLI (P21888) (461 aa) fasta scores: E(): 2.2e-57, 50% id in 496 aa, and to Neisseria meningitidis cysteinyl-tRNA synth [...] |
| BP1909 protein network | https://string-db.org/network/257313.BP1909 | Similar to Schizosaccharomyces pombe DNA-3-methyladenine glycosylase Mag1 or Spapb24d3.04C SW:MAG1_SCHPO (Q92383) (228 aa) fasta scores: E(): 2e-16, 34.84% id in 198 aa, and to Halobacterium sp 3 [...] |
| accA-2 protein network | https://string-db.org/network/257313.BP1910 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on [...] |
| BP1911 protein network | https://string-db.org/network/257313.BP1911 | Transposase for IS481 element. |
| tilS protein network | https://string-db.org/network/257313.BP1912 | Conserved hypothetical protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine i [...] |
| ask protein network | https://string-db.org/network/257313.BP1913 | Aspartokinase; Similar to Mycobacterium smegmatis aspartokinase Ask SW:AK_MYCSM (P41403) (421 aa) fasta scores: E(): 2e-66, 46.28% id in 417 aa, and to Ralstonia solanacearum probable aspartate k [...] |
| BP1914 protein network | https://string-db.org/network/257313.BP1914 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP1915 protein network | https://string-db.org/network/257313.BP1915 | Conserved hypothetical protein; Similar to Streptomyces glaucescens tetracenomycin polyketide synthesis protein TcmJ SW:TCMJ_STRGA (P16558) (149 aa) fasta scores: E(): 0.00089, 26.84% id in 149 a [...] |
| BP1916 protein network | https://string-db.org/network/257313.BP1916 | Similar to Rhizobium meliloti hypothetical protein Sma0797 TR:AAK65090 (EMBL:AE007233) (108 aa) fasta scores: E(): 8.5e-16, 42.15% id in 102 aa, and to Agrobacterium tumefaciens StrC58 Agr_l_1239 [...] |
| BP1917 protein network | https://string-db.org/network/257313.BP1917 | Putative 3-hydroxyacyl-CoA dehydrogenase; Similar to Oryctolagus cuniculus lambda-crystallin SW:CRYL_RABIT (P14755) (319 aa) fasta scores: E(): 2.2e-28, 35.43% id in 302 aa, and to Rhizobium loti [...] |
| BP1918 protein network | https://string-db.org/network/257313.BP1918 | Putative membrane protein; Similar to Bacillus halodurans C4-dicarboxylate transport system Bh2672 TR:Q9K9H5 (EMBL:AP001516) (183 aa) fasta scores: E(): 1.4e-07, 29.6% id in 152 aa, and to Agroba [...] |
| BP1919 protein network | https://string-db.org/network/257313.BP1919 | Putative membrane protein; Similar to Pasteurella multocida hypothetical protein Pm0273 TR:Q9CNZ7 (EMBL:AE006062) (427 aa) fasta scores: E(): 1.8e-62, 43.91% id in 419 aa, and to Bacillus halodur [...] |
| BP1920 protein network | https://string-db.org/network/257313.BP1920 | Putative exported protein; Similar to Rhizobium meliloti putative ABC transporter periplasmic solute-binding protein Smb20036 TR:CAC48439 (EMBL:AL603642) (338 aa) fasta scores: E(): 4.7e-25, 32.1 [...] |
| bioH protein network | https://string-db.org/network/257313.BP1921 | Putative hydrolase; Similar to Kurthia sp538-KA26 BioH TR:Q9AJM9 (EMBL:AB045874) (267 aa) fasta scores: E(): 1.4e-15, 30.36% id in 247 aa, and to Caulobacter crescentus hydrolase, alpha/beta hydr [...] |
| nadX2 protein network | https://string-db.org/network/257313.BP1922 | Putative exported protein; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate. |
| BP1923 protein network | https://string-db.org/network/257313.BP1923 | Probable short chain dehydrogenase; Similar to Brevibacterium spHCU cyclohexanol dehydrogenase ChnA TR:AAK73164 (EMBL:AF257214) (256 aa) fasta scores: E(): 8.4e-30, 42.29% id in 253 aa, and to St [...] |
| BP1924 protein network | https://string-db.org/network/257313.BP1924 | Probable TetR-family transcriptional regulator; Similar to Burkholderia pseudomallei regulator AmrR TR:O87934 (EMBL:AF072887) (187 aa) fasta scores: E(): 0.18, 26.11% id in 180 aa, and to Agrobac [...] |
| BP1925 protein network | https://string-db.org/network/257313.BP1925 | LysR-family transcriptional regulator; Similar to Escherichia coli transcriptional activator protein LysR or B2839 SW:LYSR_ECOLI (P03030) (311 aa) fasta scores: E(): 1.7e-20, 30.63% id in 284 aa, [...] |
| BP1926 protein network | https://string-db.org/network/257313.BP1926 | Putative extracellular solute-binding protein; Similar to Rhizobium loti ABC transporter, binding protein Mlr7676 TR:Q985H2 (EMBL:AP003012) (370 aa) fasta scores: E(): 5.6e-54, 41.92% id in 353 a [...] |
| BP1928 protein network | https://string-db.org/network/257313.BP1928 | Conserved hypothetical protein (Pseudogene); (C)3 in pertussis; (C)3(GAGCGCGGAAATGGCC) in parapertussis and bronchiseptica. |
| BP1929 protein network | https://string-db.org/network/257313.BP1929 | Similar to Rhizobium loti ABC transporter, permease protein Mll2949 TR:Q98HB0 (EMBL:AP003000) (265 aa) fasta scores: E(): 3.9e-31, 40.4% id in 250 aa, and to Pseudomonas aeruginosa probable perme [...] |
| BP1930 protein network | https://string-db.org/network/257313.BP1930 | Similar to Rhizobium loti ABC transporter, ATP-binding protein Mll2948 TR:Q98HB1 (EMBL:AP003000) (371 aa) fasta scores: E(): 3.5e-46, 43.86% id in 367 aa, and to Pseudomonas aeruginosa probable A [...] |
| BP1931 protein network | https://string-db.org/network/257313.BP1931 | Similar to Vibrio cholerae NADH-dependent flavin oxidoreductase, Oye family Vca0998 TR:Q9KKV2 (EMBL:AE004426) (347 aa) fasta scores: E(): 1.1e-27, 35.46% id in 344 aa, and to Xylella fastidiosa N [...] |
| BP1933 protein network | https://string-db.org/network/257313.BP1933 | Probable transcriptional regulator (pseudogene); Predicted helix-turn-helix motif with score 1388 (+3.91 SD) at aa 31-52, sequence LTLAEAAYRTGLSRAAARRVLL. |
| BP1934 protein network | https://string-db.org/network/257313.BP1934 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-48, 47.26% id in 311 aa, and to Agrobacterium tume [...] |
| BP1935 protein network | https://string-db.org/network/257313.BP1935 | Similar to Rhizobium meliloti hypothetical protein Sma2289 TR:AAK65890 (EMBL:AE007308) (130 aa) fasta scores: E(): 2.1e-10, 34.4% id in 125 aa, and to Streptomyces coelicolor conserved hypothetic [...] |
| BP1936 protein network | https://string-db.org/network/257313.BP1936 | Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 15.2 kDa protein Scd82.08 TR:Q9L0M3 (EMBL:AL160431) (142 aa) fasta scores: E(): 0.0063, 26.38% id in 144 aa. |
| BP1937 protein network | https://string-db.org/network/257313.BP1937 | Hypothetical protein; No significant database matches. |
| BP1938 protein network | https://string-db.org/network/257313.BP1938 | Hypothetical protein; No significant database matches. |
| BP1939 protein network | https://string-db.org/network/257313.BP1939 | Similar to Rhizobium meliloti putative transcription regulator protein Smc01226 TR:CAC46144 (EMBL:AL591787) (96 aa) fasta scores: E(): 1.5e-27, 72.04% id in 93 aa, and to Pseudomonas aeruginosa h [...] |
| nemA protein network | https://string-db.org/network/257313.BP1940 | Similar to Escherichia coli N-ethylmaleimide reductase NemA or B1650 SW:NEMA_ECOLI (P77258) (365 aa) fasta scores: E(): 7.3e-64, 51.74% id in 373 aa, and to Rhizobium loti morphinone reductase Ml [...] |
| BP1941 protein network | https://string-db.org/network/257313.BP1941 | Putative membrane protein; No significant database matches. |
| hmsR protein network | https://string-db.org/network/257313.BP1942 | Putative glycosyl transferase; Similar to Staphylococcus caprae IcaA TR:Q9AIQ8 (EMBL:AF246926) (411 aa) fasta scores: E(): 1.1e-55, 37.28% id in 405 aa, and to Yersinia pestis HmsR TR:Q56941 (EMB [...] |
| hmsF protein network | https://string-db.org/network/257313.BP1943 | Putative hemin storage protein; Similar to Yersinia pestis HmsF protein TR:Q9R7V4 (EMBL:AL031866) (673 aa) fasta scores: E(): 1.3e-94, 40.2% id in 679 aa, and to Escherichia coli hypothetical lip [...] |
| hmsH protein network | https://string-db.org/network/257313.BP1944 | Putative hemin storage protein; Similar to Yersinia pestis HmsH TR:Q56939 (EMBL:U22837) (822 aa) fasta scores: E(): 1.5e-25, 24.39% id in 701 aa. |
| BP1945 protein network | https://string-db.org/network/257313.BP1945 | Putative membrane protein; No significant database matches. |
| BP1946 protein network | https://string-db.org/network/257313.BP1946 | Similar to Rhizobium loti transcriptional regulator Mll4876 TR:Q98D38 (EMBL:AP003005) (153 aa) fasta scores: E(): 1.3e-15, 44.44% id in 135 aa, and to Pseudomonas aeruginosa probable transcriptio [...] |
| BP1947 protein network | https://string-db.org/network/257313.BP1947 | Transposase for IS481 element. |
| BP1948 protein network | https://string-db.org/network/257313.BP1948 | Branched-chain amino acid-binding protein; Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SW:BRAC_PSEAE (P21175 [...] |
| BP1949 protein network | https://string-db.org/network/257313.BP1949 | Putative permease component of branched-chain amino acid transport system; Similar to Pseudomonas aeruginosa putative membrane spanning protein OhbE TR:O87621 (EMBL:AF087482) (614 aa) fasta score [...] |
| BP1950 protein network | https://string-db.org/network/257313.BP1950 | Similar to Streptococcus pneumoniae branched-chain amino acid ABC transporter, ATP-binding protein sp0752 TR:Q97RP7 (EMBL:AE007382) (254 aa) fasta scores: E(): 1.2e-30, 42.23% id in 251 aa, and t [...] |
| BP1951 protein network | https://string-db.org/network/257313.BP1951 | Putative ATP-binding component of ABC transporter; Similar to Pseudomonas aeruginosa putative substrate binding protein OhbG TR:O87623 (EMBL:AF087482) (239 aa) fasta scores: E(): 5.2e-31, 46.44% [...] |
| BP1953 protein network | https://string-db.org/network/257313.BP1953 | Putative cytochrome (Pseudogene); (CG)4 in pertussis; (CG)3 in parapertussis. |
| BP1954 protein network | https://string-db.org/network/257313.BP1954 | Similar to Streptomyces coelicolor putative salicylate hydroxylase Sce29.14C TR:Q9Z4Y6 (EMBL:AL035707) (420 aa) fasta scores: E(): 2.3e-46, 40.42% id in 329 aa, and to Acinetobacter SpADP1. hypot [...] |
| maiA-2 protein network | https://string-db.org/network/257313.BP1955 | Similar to Serratia marcescens maleate cis-trans isomerase MaiA TR:Q9KWI0 (EMBL:AB035810) (250 aa) fasta scores: E(): 8.2e-69, 79.67% id in 246 aa, and to Bacillus stearothermophilus maleate cis- [...] |
| BP1957 protein network | https://string-db.org/network/257313.BP1957 | Probable alpha/beta hydrolase (Pseudogene); G in pertussis; G(AG) in parapertussis and bronchiseptica. |
| BP1958 protein network | https://string-db.org/network/257313.BP1958 | Putative isochorismatase; Similar to Arthrobacter sp N-carbamoylsarcosine amidase SW:CSH_ARTSP (P32400) (264 aa) fasta scores: E(): 2e-14, 32.67% id in 202 aa, and to Arthrobacter keyseri putativ [...] |
| BP1959 protein network | https://string-db.org/network/257313.BP1959 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP1961 protein network | https://string-db.org/network/257313.BP1961 | HMMPfam hit to PF01315, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain. |
| bfrI protein network | https://string-db.org/network/257313.BP1962 | Putative ferrisiderophore receptor; Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor FiuA TR:O68595 (EMBL:AF051691) (802 aa) fasta scores: E(): 1.7e-71, 36.83% id in 7 [...] |
| BP1965 protein network | https://string-db.org/network/257313.BP1965 | Putative transcriptional regulator (Pseudogene); In-frame TGA stop codon in pertussis; TGG in parapertussis and bronchiseptica. |
| BP1969 protein network | https://string-db.org/network/257313.BP1969 | Fusion between a transposase and a C-terminal portion of a regulatory protein (Pseudogene); HMMPfam hit to PF00196, Bacterial regulatory proteins, luxR family. |
| pgm protein network | https://string-db.org/network/257313.BP1970 | Phosphoglucomutase; Similar to Bordetella bronchiseptica phosphoglucomutase Pgm TR:Q9S3V9 (EMBL:AF171632) (392 aa) fasta scores: E(): 4.2e-74, 50.89% id in 393 aa, and to Pseudomonas aeruginosa p [...] |
| pgi protein network | https://string-db.org/network/257313.BP1971 | Similar to Zymomonas mobilis glucose-6-phosphate isomerase Pgi SW:G6PI_ZYMMO (P28718) (507 aa) fasta scores: E(): 6.4e-34, 31.46% id in 464 aa, and to Xanthomonas campestris glucose-6-phosphate i [...] |
| srpH protein network | https://string-db.org/network/257313.BP1972 | Similar to Synechococcus sp serine acetyltransferase, plasmid SrpH SW:SRPH_SYNP7 (Q59967) (319 aa) fasta scores: E(): 8.6e-57, 53.07% id in 309 aa, and to Trypanosoma cruzi serine acetyltransfera [...] |
| BP1973 protein network | https://string-db.org/network/257313.BP1973 | Putative membrane protein; Similar to Pseudomonas aeruginosa probable Mfs transporter Pa1286 TR:Q9I458 (EMBL:AE004558) (399 aa) fasta scores: E(): 2.4e-63, 49.5% id in 400 aa, and to Agrobacteriu [...] |
| cobB protein network | https://string-db.org/network/257313.BP1974 | Putative Sir2-like regulatory protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin fami [...] |
| BP1975 protein network | https://string-db.org/network/257313.BP1975 | Putative inositol monophosphatase; Similar to Escherichia coli extragenic suppressor protein SuhB or SsyA or B2533 SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.5e-13, 32.43% id in 222 aa, [...] |
| gabD-3 protein network | https://string-db.org/network/257313.BP1976 | Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 7e-125, 66.66% id in 480 aa, and to Alcaligenes eutrophus [...] |
| goaG protein network | https://string-db.org/network/257313.BP1977 | Similar to Escherichia coli 4-aminobutyrate aminotransferase GoaG or B1302 SW:GOAG_ECOLI (P50457) (421 aa) fasta scores: E(): 2.8e-108, 68.09% id in 420 aa, and to Yersinia pestis putative aminob [...] |
| BP1979 protein network | https://string-db.org/network/257313.BP1979 | Probable GntR-family transcriptional regulator (Pseudogene); (CG)3 in pertussis; (CG)4 in parapertussis and bronchiseptica. |
| BP1980 protein network | https://string-db.org/network/257313.BP1980 | Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or B3813 SW:UVRD_ECOLI (P03018) (720 aa) fasta scores: E(): 2.1e-28, 32.46% id in 687 aa, and to Ralstonia solanace [...] |
| BP1982 protein network | https://string-db.org/network/257313.BP1982 | Putative magnesium transporter (Pseudogene); 2 probable transmembrane helices predicted for BP1981 by TMHMM2.0 at aa 172-191 and 201-223. |
| BP1983 protein network | https://string-db.org/network/257313.BP1983 | Putative extracellular solute-binding protein; No significant database matches. |
| BP1984 protein network | https://string-db.org/network/257313.BP1984 | Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 6.3e-22, 28.52% id in 333 aa, and to Streptococcus pneumoniae R [...] |
| BP1985 protein network | https://string-db.org/network/257313.BP1985 | Similar to Streptomyces coelicolor oligopeptide transport integral membrane protein Sc2a11.10 TR:O86571 (EMBL:AL031184) (335 aa) fasta scores: E(): 5.7e-22, 32.79% id in 247 aa, and to Deinococcu [...] |
| BP1986 protein network | https://string-db.org/network/257313.BP1986 | Putative ABC transporter, ATP-binding protein; Similar to Agrobacterium tumefaciens MoaD TR:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 2.2e-81, 48.35% id in 548 aa, and to Rhizobium melil [...] |
| BP1987 protein network | https://string-db.org/network/257313.BP1987 | Probable MarR-family transcriptional regulator; Similar to Streptomyces coelicolor hypothetical 19.0 kDa protein Sc10b7.04 TR:Q9X957 (EMBL:Y13833) (174 aa) fasta scores: E(): 1.5e-07, 37.24% id i [...] |
| BP1989 protein network | https://string-db.org/network/257313.BP1989 | Putative membrane protein (Pseudogene); (GC)4 in pertussis; (GC)2 in parapertussis and bronchiseptica. |
| BP1990 protein network | https://string-db.org/network/257313.BP1990 | Putative membrane protein; N-terminus is similar to the N-terminal region of similar to Pseudomonas aeruginosa hypothetical protein PaA1727 TR:Q9I310 (EMBL:AE004599) (685 aa) fasta scores: E(): 1 [...] |
| BP1991 protein network | https://string-db.org/network/257313.BP1991 | Putative membrane protein; Similar to Caulobacter crescentus pilus subunit protein CC2948 TR:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 4.6e-05, 54% id in 50 aa, and to Rhizobium meliloti [...] |
| BP1992 protein network | https://string-db.org/network/257313.BP1992 | Putative membrane protein; Similar to Bacillus halodurans late competence protein required for processing and translocation BH3035 TR:Q9K8H1 (EMBL:AP001517) (162 aa) fasta scores: E(): 0.0035, 26 [...] |
| BP1993 protein network | https://string-db.org/network/257313.BP1993 | Putative exported protein; Poor database matches. Similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein PA4294 TR:Q9HWA6 (EMBL:AE004845) (168 aa) fasta scores: E(): 0.00 [...] |
| BP1994 protein network | https://string-db.org/network/257313.BP1994 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein PA5409 TR:Q9HTF5 (EMBL:AE004953) (186 aa) fasta scores: E(): 2.5, 29.8% id in 151 aa. N-terminus is similar to N- [...] |
| BP1995 protein network | https://string-db.org/network/257313.BP1995 | Putative membrane protein; N-terminus is similar to the N-terminal region of Pseudomonas aeruginosa hypothetical protein PA4305 TR:Q9HW95 (EMBL:AE004846) (303 aa) fasta scores: E(): 3.9e-14, 36.3 [...] |
| BP1996 protein network | https://string-db.org/network/257313.BP1996 | Similar to Pseudomonas aeruginosa probable type II secretion system protein PA4304 TR:Q9HW96 (EMBL:AE004846) (416 aa) fasta scores: E(): 1e-32, 39.73% id in 453 aa. C-terminus is similar to the C [...] |
| BP1997 protein network | https://string-db.org/network/257313.BP1997 | Conserved hypothetical protein; Similar to Ralstonia solanacearum probable pilus assembly protein Cpae2 or Rsp1086 or Rs02593 SWALL:Q8XQY2 (EMBL:AL646082) (439 aa) fasta scores: E(): 9.8e-23, 34. [...] |
| BP1999 protein network | https://string-db.org/network/257313.BP1999 | Bacterial type II secretion system protein (pseudogene); CCC in pertussis; C(AT)CC in parapertussis and bronchiseptica. |
| BP2001 protein network | https://string-db.org/network/257313.BP2001 | Putative membrane protein (Pseudogene); 3 probable transmembrane helices predicted for BP2000 by TMHMM2.0 at aa 81-100, 110-132 and 263-285. |
| BP2003 protein network | https://string-db.org/network/257313.BP2003 | Putative exported protein (pseudogene); Tentative CDS prediction; unknown function. |
| BP2004 protein network | https://string-db.org/network/257313.BP2004 | Putative response regulator; Similar, except at N-terminus, to Pseudomonas aeruginosa type 4 fimbriae expression regulatory protein PilR, pilR or PA4547 SW:PILR_PSEAE (Q00934) (445 aa) fasta scor [...] |
| BP2005 protein network | https://string-db.org/network/257313.BP2005 | Putative lipoprotein; Unknown function. |
| BP2006 protein network | https://string-db.org/network/257313.BP2006 | Similar to Rhizobium loti hypothetical protein MLL3449 TR:Q98G81 (EMBL:AP003002) (99 aa) fasta scores: E(): 4.7e-06, 42.268% id in 97 aa, Caulobacter crescentus hypothetical protein CC0827 TR:Q9A [...] |
| BP2007 protein network | https://string-db.org/network/257313.BP2007 | Similar to Pseudomonas aeruginosa RNA polymerase sigma-H factor AlgU or AlgT or PA0762 SW:RPSH_PSEAE (Q06198) (193 aa) fasta scores: E(): 2.4e-14, 34.783% id in 184 aa and to others e.g. Rhizobiu [...] |
| BP2008 protein network | https://string-db.org/network/257313.BP2008 | Putative exported protein; Contains a region with similarity to bacterial hypothetical proteins e.g. Deinococcus radiodurans hypothetical protein DRA0258 TR:Q9RYQ1 (EMBL:AE001863) (288 aa) fasta [...] |
| BP2009 protein network | https://string-db.org/network/257313.BP2009 | Similar to many cytochromes C e.g. Rhodopseudomonas viridis cytochrome c2 precursor CycA, cycA SW:CY2_RHOVI (P00083) (127 aa) fasta scores: E(): 1.8e-14, 45.045% id in 111 aa. |
| efp protein network | https://string-db.org/network/257313.BP2010 | Putative elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions [...] |
| BP2011 protein network | https://string-db.org/network/257313.BP2011 | Similar to Pseudomonas aeruginosa hypothetical protein PA2852 TR:Q9HZZ1 (EMBL:AE004711) (376 aa) fasta scores: E(): 1.6e-53, 47.013% id in 385 aa and to Neisseria meningitidis hypothetical protei [...] |
| BP2012 protein network | https://string-db.org/network/257313.BP2012 | Similar to Leishmania major hypothetical protein LM12.86 TR:Q9N746 (EMBL:AL390114) (163 aa) fasta scores: E(): 9.1e-20, 43.949% id in 157 aa and to Leishmania major hypothetical protein LM12.84 T [...] |
| BP2013 protein network | https://string-db.org/network/257313.BP2013 | Similar to bacterial hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA2839 TR:Q9I004 (EMBL:AE004710) (256 aa) fasta scores: E(): 2.2e-43, 49.612% id in 258 aa. Also simila [...] |
| acnA protein network | https://string-db.org/network/257313.BP2014 | Putative aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. |
| BP2015 protein network | https://string-db.org/network/257313.BP2015 | Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein PA2230 TR:Q9I1N9 (EMBL:AE004649) (223 aa) fasta scores: E(): 2e-68, 78.351% id in 194 aa and to Rhizobium meliloti put [...] |
| brfB protein network | https://string-db.org/network/257313.BP2016 | Similar to Yersinia enterocolitica ferrichrome receptor FcuA, fcuA SW:FCUA_YEREN (Q05202) (758 aa) fasta scores: E(): 5.1e-99, 40.909% id in 726 aa and to Bordetella bronchiseptica putative ferri [...] |
| BP2017 protein network | https://string-db.org/network/257313.BP2017 | Putative haloacid-type dehydrogenase; Show weak similarity to Pseudomonas sp. 2-haloalkanoic acid dehalogenase I SW:HAD1_PSESP (P24069) (227 aa) fasta scores: E(): 2.4e-09, 28.821% id in 229 aa. [...] |
| BP2018 protein network | https://string-db.org/network/257313.BP2018 | Transposase for IS481 element. |
| BP2019 protein network | https://string-db.org/network/257313.BP2019 | Putative lipoprotein; Similar in part to Rhizobium meliloti hypothetical transmembrane protein SMC00354 TR:CAC41711 (EMBL:AL591783) (221 aa) fasta scores: E(): 2.1e-09, 33.908% id in 174 aa and t [...] |
| BP2020 protein network | https://string-db.org/network/257313.BP2020 | Hypothetical protein; No significant database hits. |
| acnB protein network | https://string-db.org/network/257313.BP2021 | Putative aconitate hydratase; Similar to many e.g. Escherichia coli aconitate hydratase 2 acnB or B0118 SW:ACO2_ECOLI (P36683) (865 aa) fasta scores: E(): 0, 72.885% id in 863 aa; Belongs to the [...] |
| BP2022 protein network | https://string-db.org/network/257313.BP2022 | Putative exonuclease; Similar to the N-terminal half of Bacillus subtilis DNA polymerase III PolC-type polC or dnaF or mutI SW:DPO3_BACSU (P13267) (1437 aa) fasta scores: E(): 3.7e-07, 33.918% id [...] |
| BP2023 protein network | https://string-db.org/network/257313.BP2023 | Conserved hypothetical protein; Similar to Mus musculus RS21-C6 TDRG-Tl1 TR:Q9QY93 (EMBL:AF110764) (170 aa) fasta scores: E(): 1.6e-15, 51.456% id in 103 aa and to other bacterial hypothetical pr [...] |
| BP2024 protein network | https://string-db.org/network/257313.BP2024 | Similar to bacterial hypothetical proteins e.g. Bacillus subtilis hypothetical protein YczJ yczJ SW:YCZJ_BACSU (O31484) (95 aa) fasta scores: E(): 2.5e-09, 33.684% id in 95 aa and Deinococcus rad [...] |
| BP2025 protein network | https://string-db.org/network/257313.BP2025 | Similar to bacterial hypothetical proteins e.g. Rhizobium loti hypothetical protein MSR4226 TR:Q98EI5 (EMBL:AP003003) (98 aa) fasta scores: E(): 0.0081, 29.897% id in 97 aa. |
| BP2026 protein network | https://string-db.org/network/257313.BP2026 | Similar to bacterial putative integral membrane proteins e.g. Caulobacter crescentus integral membrane protein CC3090 TR:Q9A3W1 (EMBL:AE005972) (300 aa) fasta scores: E(): 1.3e-58, 57.388% id in [...] |
| BP2027 protein network | https://string-db.org/network/257313.BP2027 | Shows weak similarity to many bacterial putative integral membrane proteins e.g. Escherichia coli O157:H7 hypothetical membrane protein ECS4801 TR:BAB38224 (EMBL:AP002567) (291 aa) fasta scores: [...] |
| BP2028 protein network | https://string-db.org/network/257313.BP2028 | Putative exported protein; Unknown function. |
| BP2030 protein network | https://string-db.org/network/257313.BP2030 | Putative membrane protein (pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481. No significant database matches; Belongs to the LysR transcriptional regulatory family. |
| BP2031 protein network | https://string-db.org/network/257313.BP2031 | Putative acyl-CoA transferase; Similar to many e.g. Pseudomonas aeruginosa coenzyme A transferase PsecoA, psecoA TR:O84911 (EMBL:AF010184) (497 aa) fasta scores: E(): 1.9e-121, 66.397% id in 494 [...] |
| BP2034 protein network | https://string-db.org/network/257313.BP2034 | Putative transmembrane transport protein (pseudogene); 3 probable transmembrane helices predicted for BP2033 by TMHMM2.0 at aa 35-57, 67-85 and 98-120; Belongs to the LysR transcriptional regulat [...] |
| BP2036 protein network | https://string-db.org/network/257313.BP2036 | Similar to many bacterial hypothetical proteins e.g. Escherichia coli hypothetical protein YchJ, ychJ SW:YCHJ_ECOLI (P37052) (152 aa) fasta scores: E(): 1.5e-11, 44.681% id in 94 aa. This CDS pre [...] |
| BP2037 protein network | https://string-db.org/network/257313.BP2037 | Conserved hypothetical protein; Similar to many e.g. Rhizobium meliloti conserved hypothetical protein SMC00656 TR:CAC47295 (EMBL:AL591791) (93 aa) fasta scores: E(): 2.9e-08, 34.831% id in 89 aa [...] |
| BP2038 protein network | https://string-db.org/network/257313.BP2038 | Putative hydroxlacyl-CoA dehydrogenase; Similar to Streptomyces coelicolor probable hydroxyacyl-CoA dehydrogenase SCBAC20F6.15 TR:Q53926 (EMBL:X62373) (307 aa) fasta scores: E(): 1.3e-37, 41.613% [...] |
| BP2039 protein network | https://string-db.org/network/257313.BP2039 | Putative amidase; Similar to e.g. Bradyrhizobium japonicum indoleacetamide hydrolase, bam SW:HYIN_BRAJA (P19922) (465 aa) fasta scores: E(): 8.3e-46, 40.849% id in 377 aa and many other putative [...] |
| BP2040 protein network | https://string-db.org/network/257313.BP2040 | Putative membrane protein; Unknown function. |
| proA protein network | https://string-db.org/network/257313.BP2041 | Putative gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes [...] |
| holA protein network | https://string-db.org/network/257313.BP2042 | Similar to many e.g. Escherichia coli DNA polymerase III, delta subunit HolA, holA or b0640 SW:HOLA_ECOLI (P28630) (343 aa) fasta scores: E(): 3.1e-22, 31.677% id in 322 aa and to Neisseria menin [...] |
| lptE protein network | https://string-db.org/network/257313.BP2043 | Putative lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may [...] |
| leuS protein network | https://string-db.org/network/257313.BP2044 | leucyl-tRNA synthetase; Similar to many e.g. Pseudomonas aeruginosa leucyl-tRNA synthetase LeuS, leuS or PA3987 SW:SYL_PSEAE (Q9HX33) (873 aa) fasta scores: E(): 0, 59.775% id in 890 aa; Belongs [...] |
| BP2045 protein network | https://string-db.org/network/257313.BP2045 | Similar to many putative transport proteins e.g. Escherichia coli O157:H7 putative transport protein ECS3543 TR:BAB36966 (EMBL:AP002562) (394 aa) fasta scores: E(): 2.3e-76, 58.115% id in 382 aa. |
| BP2046 protein network | https://string-db.org/network/257313.BP2046 | Putative MarR-family transcriptional regulator; Similar to e.g. Erwinia chrysanthemi regulatory protein PecS, pecS SW:PECS_ERWCH (P42195) (166 aa) fasta scores: E(): 3e-17, 38.816% id in 152 aa a [...] |
| bph2 protein network | https://string-db.org/network/257313.BP2047 | Histone H1 homologue, DNA-binding protein Bph2, bph2 TR:P94344 (EMBL:U82555) (145 aa) fasta scores: E(): 2.2e-44, 100.000% id in 145 aa; Belongs to the bacterial histone-like protein family. |
| BP2048 protein network | https://string-db.org/network/257313.BP2048 | Transposase for IS481 element. |
| BP2049 protein network | https://string-db.org/network/257313.BP2049 | Putative sulfate transporter; Similar to e.g. Pseudomonas aeruginosa probable sulfate transporter PA0029 TR:Q9I7A1 (EMBL:AE004442) (517 aa) fasta scores: E(): 4e-48, 38.815% id in 523 aa and Styl [...] |
| rpmG protein network | https://string-db.org/network/257313.BP2050 | 50S ribosomal protein L33; Similar to e.g. Escherichia coli and Salmonella typhimurium 50S ribosomal protein L33, rpmG or B3636 SW:RL33_ECOLI (P02436) (54 aa) fasta scores: E(): 1.9e-14, 75.926% [...] |
| rpmB protein network | https://string-db.org/network/257313.BP2051 | Similar to e.g. Escherichia coli 50S ribosomal protein L28, rpmB or B3637 SW:RL28_ECOLI (P02428) (77 aa) fasta scores: E(): 6.9e-21, 74.667% id in 75 aa; Belongs to the bacterial ribosomal protei [...] |
| BP2052 protein network | https://string-db.org/network/257313.BP2052 | Putative transmembrane transport protein; Similar to many e.g. Pseudomonas aeruginosa probable MFS transporter PA3573 TR:Q9HY47 (EMBL:AE004778) (392 aa) fasta scores: E(): 2.1e-54, 45.455% id in [...] |
| BP2055 protein network | https://string-db.org/network/257313.BP2055 | Similar to many e.g. Escherichia coli glycine betaine-binding periplasmic protein, proX or proU or b2679 SW:PROX_ECOLI (P14177) (330 aa) fasta scores: E(): 4e-08, 24.096% id in 332 aa. Also simil [...] |
| BP2056 protein network | https://string-db.org/network/257313.BP2056 | Similar to many e.g. Escherichia coli glycine betaine/L-proline transport system permease protein, proW or b2678 SW:PROW_ECOLI (P14176) (354 aa) fasta scores: E(): 1.4e-42, 47.566% id in 267 aa. |
| BP2057 protein network | https://string-db.org/network/257313.BP2057 | Putative ABC-transporter ATP-binding protein; Similar to many e.g. Lactococcus lactis BusaA busaA TR:Q9RQ06 (EMBL:AF139575) (407 aa) fasta scores: E(): 1.8e-58, 47.783% id in 406 aa and to Salmon [...] |
| BP2058 protein network | https://string-db.org/network/257313.BP2058 | Putative tautomerase; Shows weak similarity over the N-terminal 60 residues to tautomerases e.g. Pseudomonas putida 4-oxalocrotonate tautomerase xylH SW:XYLH_PSEPU (Q01468) (62 aa) fasta scores: [...] |
| BP2059 protein network | https://string-db.org/network/257313.BP2059 | Putative thiolase; Similar to many thioloases e.g. Alcaligenes eutrophus beta-ketothiolase bktB TR:O68275 (EMBL:AF026544) (394 aa) fasta scores: E(): 3.1e-106, 75.897% id in 390 aa and Clostridiu [...] |
| BP2060 protein network | https://string-db.org/network/257313.BP2060 | Similar to many hypothetical proteins e.g. Neisseria meningitidis putative transferase NMA1087 or NMB0869 TR:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.5e-19, 32.432% id in 259 aa and P [...] |
| BP2061 protein network | https://string-db.org/network/257313.BP2061 | Similar to many putative transcriptional regulators e.g. Rhizobium meliloti putative transcriptional regulator SMB20773 TR:CAC49865 (EMBL:AL603647) (228 aa) fasta scores: E(): 6.7e-17, 38.350% id [...] |
| BP2062 protein network | https://string-db.org/network/257313.BP2062 | Similar to e.g. Rhizobium leguminosarum malonyl-CoA decarboxylase matA TR:Q9ZIP6 (EMBL:AF117694) (462 aa) fasta scores: E(): 4.7e-36, 46.012% id in 326 aa and Homo sapiens malonyl-CoA decarboxyla [...] |
| BP2063 protein network | https://string-db.org/network/257313.BP2063 | Conserved hypothetical protein; Similar to many enoyl-CoA hydratase family proteins e.g. Streptomyces coelicolor putative enoyl CoA hydratase SC5f2A.31C TR:Q9X7Q4 (EMBL:AL049587) (257 aa) fasta s [...] |
| BP2066 protein network | https://string-db.org/network/257313.BP2066 | Putative malonyl-CoA synthetase (pseudogene); HMMPfam hit to PF00501, AMP-binding enzyme. |
| BP2067 protein network | https://string-db.org/network/257313.BP2067 | Putative superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. |
| BP2068 protein network | https://string-db.org/network/257313.BP2068 | Putative exported protein; Similar to many hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA3836 TR:Q9HXG8 (EMBL:AE004801) (325 aa) fasta scores: E(): 1.9e-83, 76.543% id [...] |
| BP2070 protein network | https://string-db.org/network/257313.BP2070 | Putative transmembrane component of ABC transporter (pseudogene); 7 probable transmembrane helices predicted for BP2069 by TMHMM2.0 at aa 13-35, 42-61, 85-107, 133-155, 165-184, 189-208 and 223-2 [...] |
| BP2071 protein network | https://string-db.org/network/257313.BP2071 | Putative molybdenum-binding protein; Similar to Azotobacter vinelandii molybdenum transport protein ModA SW:MODA_AZOVI (P37733) (270 aa) fasta scores: E(): 3e-33, 46.341% id in 246 aa and Rhodoba [...] |
| BP2072 protein network | https://string-db.org/network/257313.BP2072 | Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein PA4793 TR:Q9HV15 (EMBL:AE004892) (187 aa) fasta scores: E(): 4.2e-06, 27.374% id in 179 aa. |
| BP2073 protein network | https://string-db.org/network/257313.BP2073 | Similar to hypothetical proteins e.g. Rhizobium loti hypothetical protein MLR2398 TR:Q98IH7 (EMBL:AP002999) (390 aa) fasta scores: E(): 7.7e-67, 52.660% id in 376 aa. |
| BP2074 protein network | https://string-db.org/network/257313.BP2074 | Putative DNA-binding protein; Similar to the C-termini of two-component response regulators e.g. Rhodobacter sphaeroides DmsR dmsR TR:O32479 (EMBL:D89075) (232 aa) fasta scores: E(): 1.9e-05, 36. [...] |
| BP2075 protein network | https://string-db.org/network/257313.BP2075 | Putative efflux system inner membrane protein; Similar to e.g. Escherichia coli acriflavine resistance protein E precursor acrE or envC or b3265 SW:ACRE_ECOLI (P24180) (385 aa) fasta scores: E(): [...] |
| BP2076 protein network | https://string-db.org/network/257313.BP2076 | Putative efflux system transmembrane protein; Similar to e.g. Escherichia coli acriflavine resistance protein B acrB or acrE or b0462 SW:ACRB_ECOLI (P31224) (1049 aa) fasta scores: E(): 3.1e-201, [...] |
| pdxJ protein network | https://string-db.org/network/257313.BP2078 | Putative efflux system outer membrane component (Pseudogene); Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2 [...] |
| acpS protein network | https://string-db.org/network/257313.BP2079 | Putative holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS fam [...] |
| nagZ protein network | https://string-db.org/network/257313.BP2080 | Putative beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving ri [...] |
| uvrC protein network | https://string-db.org/network/257313.BP2081 | Putative excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is [...] |
| pgsA protein network | https://string-db.org/network/257313.BP2082 | Similar to many e.g. Escherichia coli CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pgsA or b1912 SW:PGSA_ECOLI (P06978) (181 aa) fasta scores: E(): 7.1e-27, 50.276% id in 18 [...] |
| queF protein network | https://string-db.org/network/257313.BP2084 | Putative transmembrane transport protein (pseudogene); Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). |
| aceA protein network | https://string-db.org/network/257313.BP2085 | Putative isocitrate lyase; Similar to many e.g. Escherichia coli isocitrate lyase aceA or b4015 SW:ACEA_ECOLI (P05313) (434 aa) fasta scores: E(): 9.8e-123, 70.805% id in 435 aa. |
| BP2087 protein network | https://string-db.org/network/257313.BP2087 | Transposase for IS481 element. |
| BP2089 protein network | https://string-db.org/network/257313.BP2089 | Putative ABC-transporter permease component (pseudogene); Signal peptide predicted for BP2088 by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.795 between res [...] |
| BP2090 protein network | https://string-db.org/network/257313.BP2090 | Similar to many ABC-transporter substrate-binding proteins e.g. Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor braC or PA1074 SW:BRAC_PSE [...] |
| BP2091 protein network | https://string-db.org/network/257313.BP2091 | Similar to many dioxygenase components e.g. Pseudomonas putida large subunit of terminal dioxygenase tdnA1 TR:P95531 (EMBL:D85415) (448 aa) fasta scores: E(): 9.9e-42, 34.954% id in 432 aa, and P [...] |
| BP2092 protein network | https://string-db.org/network/257313.BP2092 | Putative dioxygenase component; Similar to many e.g. Pseudomonas putida p-cumate dioxygenase small subunit cmtAc TR:Q51975 (EMBL:U24215) (180 aa) fasta scores: E(): 3.1e-10, 27.647% id in 170 aa [...] |
| BP2093 protein network | https://string-db.org/network/257313.BP2093 | enoyl-CoA hydratase/isomerase-like protein; Similar to many e.g. Streptomyces collinus 2-cyclohexenylcarbonyl CoA isomerase chcB TR:Q9L4S8 (EMBL:AF268489) (269 aa) fasta scores: E(): 9e-18, 34.10 [...] |
| BP2094 protein network | https://string-db.org/network/257313.BP2094 | Putative 3-oxoacyl-CoA or-ACP reductase; Similar to many e.g. Zoogloea ramigera acetoacetyl-CoA reductase phbB SW:PHBB_ZOORA (P23238) (241 aa) fasta scores: E(): 1.7e-24, 41.494% id in 241 aa and [...] |
| BP2095 protein network | https://string-db.org/network/257313.BP2095 | Putative ferredoxin; Similar to many e.g. Caulobacter crescentus ferredoxin, 2fe-2s fdxB or fdxP or CC3524 SW:FER2_CAUCR (P37098) (106 aa) fasta scores: E(): 1.6e-17, 50.495% id in 101 aa. |
| BP2096 protein network | https://string-db.org/network/257313.BP2096 | Putative fatty-acyl-CoA racemase; Similar to many e.g. Rattus norvegicus alpha-methylacyl-CoA racemase AMACR SW:AMAC_RAT (P70473) (381 aa) fasta scores: E(): 8.3e-53, 44.416% id in 385 aa and Str [...] |
| BP2097 protein network | https://string-db.org/network/257313.BP2097 | Putative esterase; Similar to e.g. Streptomyces hygroscopicus acetyl-hydrolase bah SW:BAH_STRHY (Q01109) (299 aa) fasta scores: E(): 1.2e-24, 39.912% id in 228 aa and to Bordetella pertussis hypo [...] |
| BP2098 protein network | https://string-db.org/network/257313.BP2098 | Putative acyl-CoA ligase; Similar to Azoarcus evansii aerobic phenylacetate-CoA ligase paaK or pacD TR:Q9L9C1 (EMBL:AF176259) (440 aa) fasta scores: E(): 2.1e-39, 33.710% id in 442 aa and Escheri [...] |
| BP2099 protein network | https://string-db.org/network/257313.BP2099 | Similar to many putative thiolases e.g. Caulobacter crescentus thiolase family protein CC1432 TR:Q9A8C2 (EMBL:AE005818) (400 aa) fasta scores: E(): 1.5e-111, 67.929% id in 396 aa; Belongs to the [...] |
| BP2100 protein network | https://string-db.org/network/257313.BP2100 | Similar to Caulobacter crescentus hypothetical protein CC1431 TR:Q9A8C3 (EMBL:AE005818) (488 aa) fasta scores: E(): 3e-65, 44.136% id in 469 aa. |
| BP2102 protein network | https://string-db.org/network/257313.BP2102 | Hypothetical protein (pseudogene); (TG)2 in pertussis; (TG)1 in parapertussis and bronchiseptica; Belongs to the LysR transcriptional regulatory family. |
| BP2103 protein network | https://string-db.org/network/257313.BP2103 | Putative exported protein; Similar to many hypothetical proteins e.g. Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.4e-41, 40 [...] |
| BP2104 protein network | https://string-db.org/network/257313.BP2104 | Transposase for IS481 element. |
| BP2105 protein network | https://string-db.org/network/257313.BP2105 | Transposase for IS481 element. |
| BP2106 protein network | https://string-db.org/network/257313.BP2106 | Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA3338 TR:Q9HYQ7 (EMBL:AE004756) (96 aa) fasta scores: E(): 3.1e-25, 70.213% id in 94 aa and Rhizobium loti hypot [...] |
| BP2107 protein network | https://string-db.org/network/257313.BP2107 | Similar to hypothetical proteins e.g. Caulobacter crescentus hypothetical protein CC3056 TR:Q9A3Z4 (EMBL:AE005969) (137 aa) fasta scores: E(): 6.6e-14, 43.590% id in 117 aa. |
| BP2108 protein network | https://string-db.org/network/257313.BP2108 | Putative membrane protein; Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA2662 TR:Q9I0H6 (EMBL:AE004695) (397 aa) fasta scores: E(): 7.8e-34, 39.747% id in 39 [...] |
| BP2109 protein network | https://string-db.org/network/257313.BP2109 | Putative membrane protein; Similar to hypothetical proteins e.g. Neisseria meningitidis hypothetical protein NMB0013 TR:Q9K1Q7 (EMBL:AE002359) (149 aa) fasta scores: E(): 2.4e-16, 44.444% id in 1 [...] |
| BP2110 protein network | https://string-db.org/network/257313.BP2110 | Similar to many e.g. Escherichia coli exodeoxyribonuclease III xthA or b1749 SW:EX3_ECOLI (P09030) (268 aa) fasta scores: E(): 1.2e-18, 36.842% id in 266 aa and Neisseria meningitidis putative ex [...] |
| BP2111 protein network | https://string-db.org/network/257313.BP2111 | Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. |
| BP2112 protein network | https://string-db.org/network/257313.BP2112 | Putative oxidoreductase; The methionine start codon of this CDS is substituted with a threonine. Similar to Escherichia coli oxidoreductase UcpA or B2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) [...] |
| BP2114 protein network | https://string-db.org/network/257313.BP2114 | Putative amidase (pseudogene); TGA stop in pertussis; TGG in parapertussis. |
| BP2115 protein network | https://string-db.org/network/257313.BP2115 | Similar to hypothetical proteins e.g. Helicobacter pylori J99 hypothetical protein JHP0295 TR:Q9ZMC6 (EMBL:AE001466) (293 aa) fasta scores: E(): 2.6e-24, 36.8% id in 288 aa and Yersinia pseudotub [...] |
| BP2116 protein network | https://string-db.org/network/257313.BP2116 | Putative exported protein; Similar to hypothetical proteins e.g. Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.1e-40, 38.26% [...] |
| BP2119 protein network | https://string-db.org/network/257313.BP2119 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| gor protein network | https://string-db.org/network/257313.BP2120 | Glutathione reductase; Similar to e.g. Pseudomonas aeruginosa glutathione reductase Gor or PA2025 SW:GSHR_PSEAE (P23189) (451 aa) fasta scores: E(): 1.6e-143, 80.44% id in 450 aa, and to Escheric [...] |
| BP2121 protein network | https://string-db.org/network/257313.BP2121 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| aroG protein network | https://string-db.org/network/257313.BP2124 | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive (pseudogene); (GAGG)2 in pertussis; (GAGG)1 in parapertussis and bronchiseptica. |
| BP2125 protein network | https://string-db.org/network/257313.BP2125 | Similar to many putative transcriptional regulators e.g. Rhizobium meliloti putative gstR-like transcriptional regulator protein TR:CAC48407 (EMBL:AL603642) (301 aa) fasta scores: E(): 4e-44, 43. [...] |
| BP2125A protein network | https://string-db.org/network/257313.BP2125A | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1969 TR:Q9I2D5 (EMBL:AE004623) (130 aa) fasta scores: E()=4.5e-06, 38.18% id in 110 aa. |
| BP2126 protein network | https://string-db.org/network/257313.BP2126 | Putative oxidoreductase subunit; Similar to e.g. Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit iorA SW:IORA_BREDI (Q51697) (152 aa) fasta scores: E(): 1.3e-27, 50.98% id in 1 [...] |
| BP2127 protein network | https://string-db.org/network/257313.BP2127 | Putative exported oxidoreductase subunit; Similar to e.g. Brevundimonas diminuta isoquinoline 1-oxidoreductase beta subunit iorB SW:IORB_BREDI (Q51698) (781 aa) fasta scores: E(): 4e-16, 34.58% i [...] |
| BP2128 protein network | https://string-db.org/network/257313.BP2128 | Conserved hypothetical protein; Similar to many e.g. Pseudomonas aeruginosa hypothetical protein PA4618 TR:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 2.4e-34, 37.72% id in 326 aa. Also si [...] |
| BP2129 protein network | https://string-db.org/network/257313.BP2129 | Similar to many putative transcriptional regulators e.g. Pseudomonas aeruginosa probable transcriptional regulator PA2047 TR:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 7.8e-55, 55.47% id [...] |
| BP2130 protein network | https://string-db.org/network/257313.BP2130 | Similar to Xanthomonas axonopodis hypothetical protein Xac2490 SWALL:AAM37341 (EMBL:AE011886) (294 aa) fasta scores: E(): 1.3e-28, 54.26% id in 293 aa, and to Xanthomonas campestris hypothetical [...] |
| BP2131 protein network | https://string-db.org/network/257313.BP2131 | Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA4012 TR:Q9HX15 (EMBL:AE004818) (197 aa) fasta scores: E(): 5.1e-10, 32.97% id in 188 aa. |
| BP2132 protein network | https://string-db.org/network/257313.BP2132 | Similar to hypothetical proteins e.g. Pseudomonas aeruginosa hypothetical protein PA1353 TR:Q9I3Z1 (EMBL:AE004565) (137 aa) fasta scores: E(): 6.3e-21, 47.69% id in 130 aa. |
| BP2133 protein network | https://string-db.org/network/257313.BP2133 | Putative transmembrane efflux protein; Similar to many e.g. Streptomyces lavendulae mitomycin C translocase mct TR:Q9WVV3 (EMBL:AF127374) (484 aa) fasta scores: E(): 8.6e-53, 41.7% id in 470 aa a [...] |
| BP2134 protein network | https://string-db.org/network/257313.BP2134 | Similar to hypothetical proteins e.g. Agrobacterium tumefaciens hypothetical protein TR:AAK88141 (EMBL:AE008154) (118 aa) fasta scores: E(): 2.1e-19, 42.98% id in 114 aa and Arabidopsis thaliana [...] |
| BP2137 protein network | https://string-db.org/network/257313.BP2137 | Putative acetyltransferase (pseudogene); Inverted repeat for IS481 element. |
| BP2138 protein network | https://string-db.org/network/257313.BP2138 | Similar to ABC-transporter ATP-binding components e.g. Vibrio cholerae putative toxin secretion transporter VC1446 TR:Q9KS15 (EMBL:AE004223) (721 aa) fasta scores: E(): 3.2e-44, 32.58% id in 577 [...] |
| BP2139 protein network | https://string-db.org/network/257313.BP2139 | Putative lipoprotein; Unknown function. |
| BP2140 protein network | https://string-db.org/network/257313.BP2140 | Putative membrane protein; Similar to e.g. Pseudomonas aeruginosa hypothetical protein PA4467 TR:Q9HVV1 (EMBL:AE004860) (310 aa) fasta scores: E(): 6.6e-31, 48.42% id in 254 aa and Myxococcus xan [...] |
| BP2141 protein network | https://string-db.org/network/257313.BP2141 | Putative exported protein; Unknown function. |
| BP2142 protein network | https://string-db.org/network/257313.BP2142 | Similar to many e.g. Rhizobium meliloti putative transcription regulator protein SMC02425 TR:CAC47179 (EMBL:AL591791) (225 aa) fasta scores: E(): 9.6e-26, 36.6% id in 224 aa. |
| BP2143 protein network | https://string-db.org/network/257313.BP2143 | Putative sulfate transporter; Similar to many e.g. Vibrio cholerae sulfate permease family protein VCA0077 TR:Q9KN88 (EMBL:AE004350) (553 aa) fasta scores: E(): 1.8e-139, 68.14% id in 540 aa. |
| BP2144 protein network | https://string-db.org/network/257313.BP2144 | Similar to Agrobacterium tumefaciens hypothetical protein AGR_C_3685P TR:AAK87787 (EMBL:AE008120) (182 aa) fasta scores: E(): 2e-21, 37.83% id in 185 aa and Rhizobium meliloti hypothetical protei [...] |
| BP2145 protein network | https://string-db.org/network/257313.BP2145 | Putative ArsR-family transcriptional regulator; Similar to many e.g. Agrobacterium tumefaciens hypothetical protein AGR_C_3686P TR:AAK87788 (EMBL:AE008120) (142 aa) fasta scores: E(): 1.1e-21, 51 [...] |
| BP2146 protein network | https://string-db.org/network/257313.BP2146 | Conserved hypothetical protein; Similar, except at the N-terminus, to Deinococcus radiodurans hydrolase-related protein DR1403 TR:Q9RUI3 (EMBL:AE001985) (277 aa) fasta scores: E(): 3.7e-37, 45.57 [...] |
| BP2147 protein network | https://string-db.org/network/257313.BP2147 | Putative exported protein; Similar to e.g. Neisseria meningitidis hypothetical protein NMB0783 TR:Q9K039 (EMBL:AE002432) (159 aa) fasta scores: E(): 5.5e-15, 44.65% id in 159 aa and Haemophilus d [...] |
| BP2148 protein network | https://string-db.org/network/257313.BP2148 | Similar to Rhizobium loti hypothetical protein MSR0042 TR:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 1.2e-11, 67.79% id in 59 aa. |
| BP2149 protein network | https://string-db.org/network/257313.BP2149 | Putative araC-family transcriptional regulator; Similar to many e.g. Agrobacterium tumefaciens AGR_PAT_562P TR:AAK90764 (EMBL:AE007908) (340 aa) fasta scores: E(): 7e-25, 32.45% id in 265 aa. |
| BP2150 protein network | https://string-db.org/network/257313.BP2150 | Similar to e.g. Rhizobium meliloti conserved hypothetical protein SMC01560 TR:CAC46890 (EMBL:AL591790) (117 aa) fasta scores: E(): 8.1e-22, 52.17% id in 115 aa and Escherichia coli hypothetical p [...] |
| BP2151 protein network | https://string-db.org/network/257313.BP2151 | Putative oxidoreductase; Similar to e.g. Streptomyces coelicolor putative oxidoreductase SCF55.14 TR:Q9RJQ0 (EMBL:AL132991) (289 aa) fasta scores: E(): 1.4e-35, 46.12% id in 284 aa and Pseudomona [...] |
| BP2152 protein network | https://string-db.org/network/257313.BP2152 | Putative lysR-family transcriptional regulator; Similar to many e.g. Burkholderia cepacia 2,2-dialkylglycine decarboxylase repressor protein dgdR SW:DGDR_BURCE (P16931) (293 aa) fasta scores: E() [...] |
| BP2153 protein network | https://string-db.org/network/257313.BP2153 | Putative exported protein; Similar to e.g. Xylella fastidiosa hypothetical protein Xf1278 TR:Q9PDV1 (EMBL:AE003961) (451 aa) fasta scores: E(): 9.3e-87, 56.77% id in 421 aa and Escherichia coli h [...] |
| BP2156 protein network | https://string-db.org/network/257313.BP2156 | Putative LysR-family transcriptional regulator (pseudogene); Predicted helix-turn-helix motif with score 1608 (+4.66 SD) at aa 29-50, sequence LSFKGAAAELHVTPTAVSHQIR. |
| acoD protein network | https://string-db.org/network/257313.BP2157 | Aldehyde dehydrogenase; Similar to Alcaligenes eutrophus acetaldehyde dehydrogenase II AcoD SW:DHA2_ALCEU (P46368) (506 aa) fasta scores: E(): 1.1e-155, 74.65% id in 509 aa. |
| BP2158 protein network | https://string-db.org/network/257313.BP2158 | Similar to Yersinia pseudotuberculosis putative transcriptional regulator TR:Q9AGD7 (EMBL:AF335466) (614 aa) fasta scores: E(): 1.1e-60, 39.49% id in 628 aa, and to Alcaligenes eutrophus acetoin [...] |
| BP2161 protein network | https://string-db.org/network/257313.BP2161 | Conserved hypothetical protein (pseudogene); In-frame TAG stop codon in pertussis; TGG in parapertussis and bronchiseptica. |
| bioD protein network | https://string-db.org/network/257313.BP2162 | Putative biotin synthesis protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to [...] |
| BP2163 protein network | https://string-db.org/network/257313.BP2163 | Hypothetical protein; Weakly similar to predicted hydrolases eg. Streptomyces coelicolor putative hydrolase SCE87.22C TR:Q9RKB6 (EMBL:AL132674) (314 aa) fasta scores: E(): 0.017, 30.62% id in 258 [...] |
| bioF protein network | https://string-db.org/network/257313.BP2164 | Putative 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier prote [...] |
| bioA protein network | https://string-db.org/network/257313.BP2165 | Similar to Escherichia coli adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA or b0774 SW:BIOA_ECOLI (P12995) (429 aa) fasta scores: E(): 2.1e-77, 50.48% id in 414 aa, and to Caulob [...] |
| BP2166 protein network | https://string-db.org/network/257313.BP2166 | Transposase for IS481 element. |
| BP2167 protein network | https://string-db.org/network/257313.BP2167 | Putative integral membrane protein; Similar to Vibrio cholerae cation transport ATPase, E1-E2 family VC1437 TR:Q9KS24 (EMBL:AE004222) (790 aa) fasta scores: E(): 5.4e-11, 29.43% id in 316 aa, and [...] |
| BP2168 protein network | https://string-db.org/network/257313.BP2168 | Putative outer membrane protein; Similar to Neisseria meningitidis (serogroup A), and putative inner membrane protein NMA1716 or NMB1516 TR:Q9JR08 (EMBL:AL162756) (62 aa) fasta scores: E(): 0.001 [...] |
| BP2170 protein network | https://string-db.org/network/257313.BP2170 | Probable cytochrome C oxidase subunit (Pseudogene); (C)1 in pertussis; (C)2 in parapertussis and bronchiseptica. |
| BP2171 protein network | https://string-db.org/network/257313.BP2171 | Similar to Vibrio cholerae cytochrome C oxidase, subunit CcoQ VC1440 TR:Q9KS21 (EMBL:AE004222) (54 aa) fasta scores: E(): 0.25, 34.78% id in 46 aa. |
| BP2172 protein network | https://string-db.org/network/257313.BP2172 | Putative cytochrome C oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. |
| BP2173 protein network | https://string-db.org/network/257313.BP2173 | Similar to many predicted ferredoxins eg. Neisseria meningitidis putative ferredoxin NMA1668 TR:Q9JTR2 (EMBL:AL162756) (498 aa) fasta scores: E(): 2.7e-76, 44.93% id in 494 aa. |
| BP2174 protein network | https://string-db.org/network/257313.BP2174 | Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein SWALL:Q8XZW4 (EMBL:AL646063) Rsc1281 or Rs02794; length 76 aa; id=54.34%; ungapped id=56.81%; E()=3.4e-05; 46 aa overl [...] |
| BP2175 protein network | https://string-db.org/network/257313.BP2175 | Putative inner membrane protein; No significant database matches. |
| BP2176 protein network | https://string-db.org/network/257313.BP2176 | Putative inner membrane protein; No significant database matches. |
| BP2177 protein network | https://string-db.org/network/257313.BP2177 | Similar to Rhizobium meliloti conserved hypothetical protein SMC00230 TR:CAC46234 (EMBL:AL591788) (165 aa) fasta scores: E(): 3.6e-31, 56.09% id in 164 aa, and to Pseudomonas aeruginosa hypotheti [...] |
| BP2178 protein network | https://string-db.org/network/257313.BP2178 | Similar to many eg. Caulobacter crescentus ABC transporter, ATP-binding protein CC3373 TR:Q9A333 (EMBL:AE005998) (314 aa) fasta scores: E(): 4.8e-77, 77.12% id in 306 aa. |
| BP2179 protein network | https://string-db.org/network/257313.BP2179 | Similar to Caulobacter crescentus ABC-2 type transporter, putative cc3372 TR:Q9A334 (EMBL:AE005998) (253 aa) fasta scores: E(): 1.6e-69, 75.79% id in 252 aa. |
| BP2180 protein network | https://string-db.org/network/257313.BP2180 | Conserved hypothetical protein; Similar to many eg. Rhizobium meliloti conserved hypothetical protein sma0665 TR:AAK65009 (EMBL:AE007226) (413 aa) fasta scores: E(): 9.9e-38, 38.28% id in 350 aa, [...] |
| BP2181 protein network | https://string-db.org/network/257313.BP2181 | Transposase for IS481 element. |
| BP2183 protein network | https://string-db.org/network/257313.BP2183 | Conserved hypothetical protein (Pseudogene); Region of unusual DNA content. |
| rpoD protein network | https://string-db.org/network/257313.BP2184 | RNA polymerase sigma factor 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the pri [...] |
| dnaG protein network | https://string-db.org/network/257313.BP2185 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. |
| rpsU protein network | https://string-db.org/network/257313.BP2186 | Similar to Escherichia coli 30S ribosomal protein S21 RpsU or B3065 or Z4418 or Ecs3948 SW:RS21_ECOLI (P02379) (70 aa) fasta scores: E(): 9.2e-14, 60% id in 70 aa, and to Neisseria meningitidis 3 [...] |
| BP2187 protein network | https://string-db.org/network/257313.BP2187 | Putative transferase; Similar to Archaeoglobus fulgidus xanthine-guanine phosphoribosyltransferase AF0239 TR:O30000 (EMBL:AE001089) (194 aa) fasta scores: E(): 1e-09, 31.81% id in 154 aa. |
| purA protein network | https://string-db.org/network/257313.BP2188 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...] |
| hisZ protein network | https://string-db.org/network/257313.BP2189 | Putative tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. |
| hflC protein network | https://string-db.org/network/257313.BP2190 | Putative inner membrane-anchored protein; HflC and HflK could regulate a protease. |
| hflK protein network | https://string-db.org/network/257313.BP2191 | Putative membrane protein; HflC and HflK could encode or regulate a protease. |
| hflX protein network | https://string-db.org/network/257313.BP2192 | Putative GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like [...] |
| hfq protein network | https://string-db.org/network/257313.BP2193 | Putative RNA-binding regulatory protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental [...] |
| his1 protein network | https://string-db.org/network/257313.BP2194 | Similar to Acetobacter pasteurianus histidinol-phosphate aminotransferase HisC or His1 SW:HIS8_ACEPA (P45358) (356 aa) fasta scores: E(): 6.2e-79, 59.6% id in 354 aa. Similar to BP3769 (34.118% i [...] |
| der protein network | https://string-db.org/network/257313.BP2195 | Putative GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (De [...] |
| bamB protein network | https://string-db.org/network/257313.BP2196 | Putative quinoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| BP2197 protein network | https://string-db.org/network/257313.BP2197 | Putative membrane protein; Similar to Neisseria meningitidis putative membrane protein NMA1064 TR:Q9JV00 (EMBL:AL162755) (209 aa) fasta scores: E(): 4.8e-16, 35.07% id in 211 aa. |
| hisS protein network | https://string-db.org/network/257313.BP2198 | Similar to Escherichia coli and histidyl-tRNA synthetase HisS or b2514 or z3777 or ecs3376 SW:SYH_ECOLI (P04804) (423 aa) fasta scores: E(): 3.1e-88, 55.89% id in 424 aa. |
| ispG protein network | https://string-db.org/network/257313.BP2199 | 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG [...] |
| BP2200 protein network | https://string-db.org/network/257313.BP2200 | Putative membrane protein; No significant database matches. |
| rlmN protein network | https://string-db.org/network/257313.BP2201 | Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proo [...] |
| ndk protein network | https://string-db.org/network/257313.BP2202 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...] |
| valS protein network | https://string-db.org/network/257313.BP2203 | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...] |
| BP2204 protein network | https://string-db.org/network/257313.BP2204 | Similar to Caulobacter crescentus putative outer membrane protein Cc0351 precursor SW:Y351_CAUCR (Q9AB80) (254 aa) fasta scores: E(): 5.8e-12, 29.38% id in 245 aa, and to Escherichia coli mlta-in [...] |
| BP2206 protein network | https://string-db.org/network/257313.BP2206 | Putative two-component response regulator (pseudogene); 20 bp deletion in pertussis, relative to parapertussis and bronchiseptica, following this codon. |
| BP2207 protein network | https://string-db.org/network/257313.BP2207 | Transposase for IS481 element. |
| BP2210 protein network | https://string-db.org/network/257313.BP2210 | Putative DNA polymerase III alpha chain (pseudogene); HMMPfam hit to PF01336, OB-fold nucleic acid binding domain. |
| BP2211 protein network | https://string-db.org/network/257313.BP2211 | Putative conserved DNA-binding protein; Similar to Escherichia coli, hypothetical protein YjeB or b4178 or z5785 or ecs5154 SW:YJEB_ECOLI (P21498) (141 aa) fasta scores: E(): 3.1e-18, 44.61% id i [...] |
| fhp protein network | https://string-db.org/network/257313.BP2212 | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects th [...] |
| BP2213 protein network | https://string-db.org/network/257313.BP2213 | Similar to Vibrio cholerae hypothetical protein Vc0519 TR:Q9KUK0 (EMBL:AE004138) (147 aa) fasta scores: E(): 2.4e-18, 51.04% id in 143 aa, and to Neisseria meningitidis hypothetical protein NMB19 [...] |
| BP2214 protein network | https://string-db.org/network/257313.BP2214 | Transposase for IS481 element. |
| ectA protein network | https://string-db.org/network/257313.BP2215 | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. |
| BP2216 protein network | https://string-db.org/network/257313.BP2216 | Putative transcriptional regulator (MarR family); Similar to Vibrio cholerae transcriptional regulator, MarR family vc1278 TR:Q9KSH8 (EMBL:AE004207) (159 aa) fasta scores: E(): 3.1e-11, 36.02% id [...] |
| BP2217 protein network | https://string-db.org/network/257313.BP2217 | Putative regulator (SIS family); Similar to Rhizobium meliloti putative transcriptional regulator protein smb20276 TR:CAC48666 (EMBL:AL603642) (296 aa) fasta scores: E(): 6.8e-19, 34.53% id in 30 [...] |
| BP2218 protein network | https://string-db.org/network/257313.BP2218 | Putative aminotransferase; Similar to Rhizobium meliloti probable aminotransferase protein smb20277 TR:CAC48667 (EMBL:AL603642) (447 aa) fasta scores: E(): 2.6e-118, 69.14% id in 444 aa, and to B [...] |
| BP2219 protein network | https://string-db.org/network/257313.BP2219 | Putative cell surface protein; Similar to Rhizobium meliloti hypothetical immunogenic protein smb20292 TR:CAC48682 (EMBL:AL603642) (327 aa) fasta scores: E(): 8e-93, 73.62% id in 326 aa, and to B [...] |
| BP2220 protein network | https://string-db.org/network/257313.BP2220 | Conserved inner membrane protein; Similar to Rhizobium meliloti hypothetical 88.3 kDa protein smb20291 TR:CAC48681 (EMBL:AL603642) (827 aa) fasta scores: E(): 1.1e-160, 54.67% id in 834 aa. |
| BP2221 protein network | https://string-db.org/network/257313.BP2221 | Transposase for IS481 element. |
| BP2222 protein network | https://string-db.org/network/257313.BP2222 | Hypothetical protein; No significant database matches. May be disrupted by downsteam IS481. |
| bapA protein network | https://string-db.org/network/257313.BP2224 | Putative autotransporter; Previously sequenced as Bordetella pertussis BapA protein BapA TR:Q9F4B4 (EMBL:AJ277632) (903 aa) fasta scores: E(): 0, 100% id in 903 aa. |
| BP2225 protein network | https://string-db.org/network/257313.BP2225 | Similar to Rhizobium meliloti putative cardiolipin synthetase transmembrane protein TR:CAC46099 (EMBL:AL591787) (487 aa) fasta scores: E(): 6.5e-100, 54% id in 487 aa, and to Bacillus firmus card [...] |
| BP2226 protein network | https://string-db.org/network/257313.BP2226 | Similar to Bacillus subtilis anti-sigma F factor antagonist spoIIAa SW:SP21_BACSU (P10727) (116 aa) fasta scores: E(): 1.1e-06, 30.84% id in 107 aa; Belongs to the anti-sigma-factor antagonist fa [...] |
| BP2227 protein network | https://string-db.org/network/257313.BP2227 | Putative anti-sigma factor; Similar to Chlamydia muridarum RsbW protein, putative tc0837 TR:Q9PJJ2 (EMBL:AE002350) (152 aa) fasta scores: E(): 6.3e-05, 28.57% id in 126 aa, and to Bacillus subtil [...] |
| alr protein network | https://string-db.org/network/257313.BP2228 | Alanine racemase, catabolic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. |
| BP2229 protein network | https://string-db.org/network/257313.BP2229 | Putative inner membrane transport protein; Similar to Pseudomonas aeruginosa probable MFS transporter pa4096 TR:Q9HWT2 (EMBL:AE004826) (419 aa) fasta scores: E(): 1.1e-10, 28.57% id in 406 aa, an [...] |
| BP2230 protein network | https://string-db.org/network/257313.BP2230 | Putative regulator; Similar to Chlamydia trachomatis sigma regulatory family protein-pp2c phosphatase rbsu or ct588 TR:O84592 (EMBL:AE001329) (650 aa) fasta scores: E(): 5e-19, 27.88% id in 373 a [...] |
| BP2231 protein network | https://string-db.org/network/257313.BP2231 | Putative exported protein; No significant database matches. |
| BP2232 protein network | https://string-db.org/network/257313.BP2232 | Hypothetical protein; No significant database matches. |
| BP2233 protein network | https://string-db.org/network/257313.BP2233 | Hypothetical protein; No significant database matches. |
| brpL protein network | https://string-db.org/network/257313.BP2234 | Similar to Erwinia amylovora putative RNA polymerase sigma factor HrpL SWALL:Q46616 (EMBL:U36244) (182 aa) fasta scores: E(): 5.7e-14, 37.41% id in 155 aa, and to Escherichia coli RNA polymerase [...] |
| bscC protein network | https://string-db.org/network/257313.BP2235 | Similar to Pseudomonas aeruginosa type II secretion protein PscC or Pa1716 SWALL:Q9I319 (EMBL:AE004598) (600 aa) fasta scores: E(): 1.6e-28, 36.15% id in 531 aa, and to Yersinia enterocolitica Ys [...] |
| bscW protein network | https://string-db.org/network/257313.BP2236 | Hypothetical protein; No significant database matches. |
| bscU protein network | https://string-db.org/network/257313.BP2237 | Putative type III secretion protein; Similar to many eg. Pseudomonas aeruginosa translocation protein in type III secretion PscU or Pa1690 TR:Q9I337 (EMBL:AE004596) (349 aa) fasta scores: E(): 1. [...] |
| bscT protein network | https://string-db.org/network/257313.BP2238 | Similar to Pseudomonas aeruginosa translocation protein in type III secretion PscT or pa1691 TR:Q9I336 (EMBL:AE004596) (262 aa) fasta scores: E(): 3.1e-29, 38.84% id in 242 aa, and to Yersinia pe [...] |
| bscS protein network | https://string-db.org/network/257313.BP2239 | Putative type III secretion protein; Similar to Bordetella bronchiseptica BscS TR:Q9L9D8 (EMBL:AF172245) (88 aa) fasta scores: E(): 3.9e-30, 97.72% id in 88 aa, and to Yersinia pestis Yop translo [...] |
| bscR protein network | https://string-db.org/network/257313.BP2240 | Putative type III secretion protein; Similar to Bordetella bronchiseptica BscR TR:Q9L9D9 (EMBL:AF172245) (223 aa) fasta scores: E(): 1.1e-79, 99.1% id in 223 aa, and to Yersinia pestis Yop transl [...] |
| bscQ protein network | https://string-db.org/network/257313.BP2241 | Putative type III secretion protein; Similar to Bordetella bronchiseptica BscQ TR:Q9L9E0 (EMBL:AF172245) (123 aa) fasta scores: E(): 3.4e-34, 98.9% id in 91 aa, and to Yersinia pestis Yop translo [...] |
| bscP protein network | https://string-db.org/network/257313.BP2243 | Hypothetical protein; No significant database matches. |
| bscO protein network | https://string-db.org/network/257313.BP2244 | Putative type III secretion protein; Similar to many eg. Bordetella bronchiseptica BscO TR:O68540 (EMBL:AF049488) (143 aa) fasta scores: E(): 3.3e-46, 97.88% id in 142 aa, and to Pseudomonas aeru [...] |
| bscN protein network | https://string-db.org/network/257313.BP2245 | Putative ATP synthase in type III secretion system; Similar to many eg. Bordetella bronchiseptica BscN TR:O68539 (EMBL:AF049488) (444 aa) fasta scores: E(): 2.6e-162, 99.32% id in 444 aa, and to [...] |
| bscL protein network | https://string-db.org/network/257313.BP2246 | Putative type III secretion protein; Similar to many eg. Bordetella bronchiseptica BscL TR:O68538 (EMBL:AF049488) (212 aa) fasta scores: E(): 8e-72, 98.58% id in 212 aa, and to Pseudomonas aerugi [...] |
| bscK protein network | https://string-db.org/network/257313.BP2247 | Conserved hypothetical protein; Similar to Bordetella bronchiseptica BscK TR:O68537 (EMBL:AF049488) (220 aa) fasta scores: E(): 9.4e-87, 98.18% id in 220 aa. |
| bscJ protein network | https://string-db.org/network/257313.BP2248 | Putative type III secretion protein; Similar to many eg. Bordetella bronchiseptica BscJ TR:O68536 (EMBL:AF049488) (274 aa) fasta scores: E(): 4.5e-97, 98.17% id in 274 aa, and to Erwinia amylovor [...] |
| bscI protein network | https://string-db.org/network/257313.BP2249 | Putative type III secretion protein; Similar to Bordetella bronchiseptica BscI TR:O68535 (EMBL:AF049488) (115 aa) fasta scores: E(): 8.1e-32, 90.43% id in 115 aa, and to Pseudomonas aeruginosa ty [...] |
| bcr4 protein network | https://string-db.org/network/257313.BP2250 | Hypothetical protein; No significant database matches. |
| bcrH2 protein network | https://string-db.org/network/257313.BP2251 | Putative regulatory protein; Weakly similar to many Pseudomonas aeruginosa regulatory protein PcrH or pa1707 TR:Q9I325 (EMBL:AE004597) (167 aa) fasta scores: E(): 0.0042, 25.34% id in 146 aa, and [...] |
| bopB protein network | https://string-db.org/network/257313.BP2252 | Similar to Bordetella bronchiseptica outer protein B BopB TR:Q9REZ5 (EMBL:AF207789) (400 aa) fasta scores: E(): 2e-118, 96.75% id in 400 aa. |
| bopD protein network | https://string-db.org/network/257313.BP2253 | Similar to Bordetella bronchiseptica outer protein D BopD TR:Q9REZ6 (EMBL:AF207788) (313 aa) fasta scores: E(): 3.5e-86, 98.4% id in 313 aa. |
| bcrH1 protein network | https://string-db.org/network/257313.BP2254 | Similar to Pseudomonas aeruginosa regulatory protein PcrH or pa1707 TR:Q9I325 (EMBL:AE004597) (167 aa) fasta scores: E(): 1.4e-12, 37.41% id in 155 aa, and to Yersinia pestis low calcium response [...] |
| BP2255 protein network | https://string-db.org/network/257313.BP2255 | Hypothetical protein; No significant database matches. |
| bsp22 protein network | https://string-db.org/network/257313.BP2256 | Putative secreted protein; Strongly similar to Bordetella bronchiseptica secreted protein 22 Bsp22 TR:Q9REZ7 (EMBL:AF207787) (205 aa) fasta scores: E(): 4.1e-68, 96.58% id in 205 aa. |
| bopN protein network | https://string-db.org/network/257313.BP2257 | Putative outer protein N; Similar to many eg. Bordetella bronchiseptica outer protein N BopN TR:Q9REZ4 (EMBL:AF207790) (365 aa) fasta scores: E(): 4.3e-132, 99.17% id in 365 aa, and to Pseudomona [...] |
| BP2258 protein network | https://string-db.org/network/257313.BP2258 | Hypothetical protein; No significant database matches. |
| BP2259 protein network | https://string-db.org/network/257313.BP2259 | Conserved hypothetical protein; Similar to Pseudomonas aeruginosa pcr3 pcr3 or pa1701 TR:O30534 (EMBL:AF010150) (121 aa) fasta scores: E(): 0.52, 31.49% id in 127 aa. |
| BP2260 protein network | https://string-db.org/network/257313.BP2260 | Conserved hypothetical protein; Similar to Bradyrhizobium japonicum Id192 TR:Q9ANI6 (EMBL:AF322012) (142 aa) fasta scores: E(): 0.99, 29.2% id in 113 aa, and to Chlamydia muridarum type III secre [...] |
| bcrD protein network | https://string-db.org/network/257313.BP2261 | Putative type III secretion pore protein; Similar to many eg. Chlamydophila caviae Cds2 protein TR:O34019 (EMBL:U88070) (709 aa) fasta scores: E(): 6e-116, 47.14% id in 700 aa, and to Salmonella [...] |
| bscD protein network | https://string-db.org/network/257313.BP2262 | Putative type III secretion protein; Weak but full length similarity to Pseudomonas aeruginosa type III secretion protein PscD TR:P95432 (EMBL:U56077) (432 aa) fasta scores: E(): 0.00018, 25.57% [...] |
| bscE protein network | https://string-db.org/network/257313.BP2263 | Hypothetical protein; No significant database matches. |
| bscF protein network | https://string-db.org/network/257313.BP2264 | Similar to Pseudomonas aeruginosa putative type III secretion protein PscF or pa1719 TR:P95434 (EMBL:U56077) (85 aa) fasta scores: E(): 0.013, 27.9% id in 86 aa. |
| BP2265 protein network | https://string-db.org/network/257313.BP2265 | Hypothetical protein; No significant database matches. |
| greA protein network | https://string-db.org/network/257313.BP2267 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a [...] |
| BP2268 protein network | https://string-db.org/network/257313.BP2268 | Similar to Escherichia coli methyl-accepting chemotaxis protein ii tar or chem or b1886 SW:MCP2_ECOLI (P07017) (553 aa) fasta scores: E(): 2.1e-60, 46.69% id in 484 aa. |
| BP2269 protein network | https://string-db.org/network/257313.BP2269 | Similar to Escherichia coli putative purine permease YcdG or b1006 SW:YCDG_ECOLI (P75892) (442 aa) fasta scores: E(): 4.5e-99, 66.58% id in 431 aa, and to Streptomyces coelicolor putative uracyl [...] |
| BP2271 protein network | https://string-db.org/network/257313.BP2271 | Putative regulatory lipoprotein; Similar to Salmonella typhimurium phosphoglycerate transport regulatory protein PgtC precursor pgtC SW:PGTC_SALTY (P37591) (397 aa) fasta scores: E(): 2.7e-23, 28 [...] |
| BP2274 protein network | https://string-db.org/network/257313.BP2274 | Putative exported oxidoreductase (Pseudogene); Signal peptide predicted for BP2273 by SignalP 2.0 HMM (Signal peptide probabilty 0.947) with cleavage site probability 0.825 between residues 21 an [...] |
| phnX protein network | https://string-db.org/network/257313.BP2275 | Putative hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. |
| BP2276 protein network | https://string-db.org/network/257313.BP2276 | Putative ABC transport permease; Similar to many eg. Rhizobium meliloti putative iron uptake ABC transporter permease protein smb21542 TR:CAC49383 (EMBL:AL603645) (680 aa) fasta scores: E(): 2.1e [...] |
| BP2277 protein network | https://string-db.org/network/257313.BP2277 | Putative ABC transport ATP-binding subunit; Similar to Pseudomonas putida ABC transporter TR:Q9KHS9 (EMBL:AF249736) (282 aa) fasta scores: E(): 2.6e-60, 67.98% id in 278 aa, and to Vibrio cholera [...] |
| BP2278 protein network | https://string-db.org/network/257313.BP2278 | Putative transcriptional regulator; Similar to Pseudomonas putida response regulator TR:Q9KHT0 (EMBL:AF249736) (289 aa) fasta scores: E(): 6.2e-53, 51.91% id in 287 aa, and to Rhodospirillum rubr [...] |
| BP2279 protein network | https://string-db.org/network/257313.BP2279 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2804 TR:Q9I039 (EMBL:AE004707) (193 aa) fasta scores: E(): 8.3e-24, 45.66% id in 173 aa, and to Rhizobium loti Mll1439 protein TR:Q98KK1 ( [...] |
| BP2280 protein network | https://string-db.org/network/257313.BP2280 | Putative sulfurtransferase; Similar to Pseudomonas aeruginosa probable 3-mercaptopyruvate sulfurtransferase SseA or pa1292 TR:Q9I452 (EMBL:AE004558) (284 aa) fasta scores: E(): 5.6e-46, 49.82% id [...] |
| htpX protein network | https://string-db.org/network/257313.BP2282 | Probable integral membrane protein (pseudogene); G in pertussis; G(C) in parapertussis and bronchiseptica; Belongs to the peptidase M48B family. |
| qor protein network | https://string-db.org/network/257313.BP2283 | Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SW:QOR_ECOLI (P28304) (327 aa) fasta scores: E(): 3.7e-67, 58.64% id in 324 aa, and to Pseudomonas aeruginosa quinone oxidor [...] |
| BP2284 protein network | https://string-db.org/network/257313.BP2284 | Conserved hypothetical integral membrane protein; Similar to Bacillus subtilis hypothetical 34.0 kDa protein in gltP-pcp intergenic region YcbK SW:YCBK_BACSU (P42243) (312 aa) fasta scores: E(): [...] |
| BP2285 protein network | https://string-db.org/network/257313.BP2285 | Conserved hypothetical integral membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3222 TR:Q9HZ18 (EMBL:AE004745) (299 aa) fasta scores: E(): 2e-56, 60.07% id in 278 aa, a [...] |
| BP2286 protein network | https://string-db.org/network/257313.BP2286 | Putative transcriptional regulator (MarR family); Similar to Burkholderia pseudomallei hypothetical 18.0 kDa protein TR:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 3.6e-17, 46.26% id in 13 [...] |
| BP2289 protein network | https://string-db.org/network/257313.BP2289 | Putative outer membrane protein (pseudogene); (CTGGG)2 in pertussis; (CTGGG)1 in parapertussis and bronchiseptica. |
| BP2290 protein network | https://string-db.org/network/257313.BP2290 | Similar to Escherichia coli, and multidrug resistance protein A EmrB or b2686 or z3987 or ecs3548 SW:EMRB_ECOLI (P27304) (512 aa) fasta scores: E(): 9.4e-102, 54.72% id in 508 aa, and to Haemophi [...] |
| BP2291 protein network | https://string-db.org/network/257313.BP2291 | Similar to Pseudomonas putida tartrate dehydrogenase SW:TTUC_PSEPU (Q51945) (364 aa) fasta scores: E(): 2.7e-99, 67.77% id in 360 aa, and to Escherichia coli probable tartrate dehydrogenase YeaU [...] |
| BP2292 protein network | https://string-db.org/network/257313.BP2292 | Putative transcriptional regulator; Similar to many eg. Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SW:MOCR_RHIME (P49309) (493 aa) fasta scores: E(): 1.4e-63, 41.43% [...] |
| BP2293 protein network | https://string-db.org/network/257313.BP2293 | Putative solute-binding transport protein (periplasmic); Similar to Agrobacterium tumefaciens Agr_l_2786p TR:AAK89959 (EMBL:AE008339) (585 aa) fasta scores: E(): 8.4e-66, 37.86% id in 515 aa, and [...] |
| BP2294 protein network | https://string-db.org/network/257313.BP2294 | Putative integral membrane transport protein; Similar to many eg. Rhizobium loti ABC transporter permease protein Mlr3397 TR:Q98GC0 (EMBL:AP003001) (328 aa) fasta scores: E(): 4.1e-47, 47.07% id [...] |
| BP2295 protein network | https://string-db.org/network/257313.BP2295 | Putative integral membrane transport protein; Similar to Rhizobium meliloti probable ABC transporter, permease protein Sma2083 TR:AAK65795 (EMBL:AE007299) (332 aa) fasta scores: E(): 1.4e-52, 52. [...] |
| BP2296 protein network | https://string-db.org/network/257313.BP2296 | Putative ABC transport ATP-binding subunit; Similar to many eg. Agrobacterium tumefaciens Agr_l_3504p TR:AAK90329 (EMBL:AE008378) (575 aa) fasta scores: E(): 2.8e-114, 60.74% id in 535 aa, and to [...] |
| BP2297 protein network | https://string-db.org/network/257313.BP2297 | Transposase for IS481 element. |
| BP2298 protein network | https://string-db.org/network/257313.BP2298 | Similar to many eg. Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SW:GABT_ECOLI (P22256) (426 aa) fasta scores: E(): 1.3e-88, 56.97% id in 416 aa, and to Rhizobium meliloti puta [...] |
| BP2299 protein network | https://string-db.org/network/257313.BP2299 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0131 TR:Q9I701 (EMBL:AE004451) (95 aa) fasta scores: E(): 1.3e-20, 66.3% id in 92 aa, and to Rhizobium loti Mll5080 protein TR:Q98CN0 (EMB [...] |
| BP2300 protein network | https://string-db.org/network/257313.BP2300 | Similar to Rhizobium loti acetylpolyamine aminohydrolase Mll0103 TR:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 5.8e-47, 46.88% id in 337 aa, and to Mycoplana ramosa acetylpolyamine aminoh [...] |
| BP2301 protein network | https://string-db.org/network/257313.BP2301 | Putative amidohydrolase; Similar to Pseudomonas aeruginosa N-carbamoyl-beta-alanine amidohydrolase Pa0444 TR:Q9I673 (EMBL:AE004481) (427 aa) fasta scores: E(): 4.3e-88, 57.31% id in 410 aa, and t [...] |
| BP2302 protein network | https://string-db.org/network/257313.BP2302 | Putative membrane protein; Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0239 TR:Q9I6P9 (EMBL:AE004462) (292 aa) fasta scores: E(): 1.1e-23, 36.17% id in 293 aa. |
| BP2303 protein network | https://string-db.org/network/257313.BP2303 | Putative aldehyde dehydrogenase; Similar to many eg. Pseudomonas aeruginosa probable aldehyde dehydrogenase Pa0219 TR:Q9I6R9 (EMBL:AE004460) (496 aa) fasta scores: E(): 1e-116, 60.97% id in 492 a [...] |
| BP2304 protein network | https://string-db.org/network/257313.BP2304 | Similar to many eg. Escherichia coli putative 2-hydroxyacid dehydrogenase YcdW or b1033 SW:YCDW_ECOLI (P75913) (325 aa) fasta scores: E(): 2.5e-48, 45.72% id in 304 aa. |
| BP2305 protein network | https://string-db.org/network/257313.BP2305 | Putative aminotransferase; Similar to many eg. Pseudomonas fluorescens family II aminotransferase TR:Q9FDI7 (EMBL:AF247644) (458 aa) fasta scores: E(): 1.5e-99, 58.64% id in 428 aa; Belongs to th [...] |
| BP2306 protein network | https://string-db.org/network/257313.BP2306 | Putative sodium:alanine symporter; Similar to many eg. Pseudomonas aeruginosa probable sodium:alanine symporter Pa2533 TR:Q9I0V1 (EMBL:AE004681) (449 aa) fasta scores: E(): 2.1e-125, 75.78% id in [...] |
| BP2307 protein network | https://string-db.org/network/257313.BP2307 | Conserved ATP-binding protein; Similar to Escherichia coli hypothetical protein yjgr yjgr or b4263 SW:YJGR_ECOLI (P39342) (500 aa) fasta scores: E(): 9.7e-112, 63.24% id in 506 aa. |
| BP2308 protein network | https://string-db.org/network/257313.BP2308 | Conserved hypothetical protein; Similar to many eg. Neisseria meningitidis hypothetical protein Nmb1648 TR:Q9JYC7 (EMBL:AE002515) (242 aa) fasta scores: E(): 6.6e-60, 67.22% id in 241 aa. |
| purD protein network | https://string-db.org/network/257313.BP2309 | Similar to Escherichia coli phosphoribosylamine--glycine ligase PurD or b4005 SW:PUR2_ECOLI (P15640) (429 aa) fasta scores: E(): 7e-93, 60.41% id in 432 aa; Belongs to the GARS family. |
| hemF protein network | https://string-db.org/network/257313.BP2310 | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vin [...] |
| nadD protein network | https://string-db.org/network/257313.BP2311 | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). |
| rsfS protein network | https://string-db.org/network/257313.BP2312 | Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 3 [...] |
| rlmH protein network | https://string-db.org/network/257313.BP2313 | Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. |
| Maf protein network | https://string-db.org/network/257313.BP2314 | Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides in [...] |
| vag8 protein network | https://string-db.org/network/257313.BP2315 | Autotransporter; Previously sequenced as Bordetella pertussis Vag8 protein Vag8-2 SWALL:Q8VV95 (EMBL:AJ420993) (915 aa) fasta scores: E(): 0, 100% id in 915 aa. |
| BP2316 protein network | https://string-db.org/network/257313.BP2316 | Transposase for IS481 element. |
| BP2317 protein network | https://string-db.org/network/257313.BP2317 | Putative ribonuclease; Similar to a family of proteins involved in processing of the 5'end of 16S rRNA and implicated in the formation of cytoplasmic axial filaments during chromosome segregation [...] |
| BP2318 protein network | https://string-db.org/network/257313.BP2318 | Putative dehydratase; Similar to Amycolatopsis methanolica prephenate dehydratase PheA or Pdt SW:PHEA_AMYME (Q44104) (304 aa) fasta scores: E(): 3.1e-19, 35.76% id in 274 aa, and to Neisseria gon [...] |
| BP2319 protein network | https://string-db.org/network/257313.BP2319 | Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1283 TR:Q9I461 (EMBL:AE004558) (186 aa) fasta scores: E(): 2.1e-41, 60.94% id in 169 aa. |
| BP2320 protein network | https://string-db.org/network/257313.BP2320 | Putative inner membrane efflux protein; Similar to many major facilitator family proteins eg. Pseudomonas aeruginosa probable MFS transporter pa1282 TR:Q9I462 (EMBL:AE004557) (501 aa) fasta score [...] |
| msbA protein network | https://string-db.org/network/257313.BP2321 | Putative ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner [...] |
| waaF protein network | https://string-db.org/network/257313.BP2322 | Heptosyltransferase II; Previously sequenced as Bordetella pertussis heptosyltransferase II WaaF TR:O07076 (EMBL:Y13475) (321 aa) fasta scores: E(): 2.3e-125, 100% id in 321 aa, and to Escherichi [...] |
| BP2323 protein network | https://string-db.org/network/257313.BP2323 | Previously sequenced as Bordetella pertussis hypothetical 19.1 kDa protein TR:O07077 (EMBL:Y13475) (179 aa) fasta scores: E(): 2.6e-63, 100% id in 179 aa, and similar to many eg. Myxococcus xanth [...] |
| BP2324 protein network | https://string-db.org/network/257313.BP2324 | Similar to others Escherichia coli hypothetical protein yeiw yeiw or b2170.1 SW:YEIW_ECOLI (P58039) (84 aa) fasta scores: E(): 2.8e-21, 65.47% id in 84 aa, and to Pseudomonas aeruginosa hypotheti [...] |
| BP2325 protein network | https://string-db.org/network/257313.BP2325 | Putative transferase; May be involved in LPS biosynthesis. Similar to many eg. Pseudomonas aeruginosa glucosyltransferase I WaaG TR:Q9S648 (EMBL:AF090724) (373 aa) fasta scores: E(): 3e-13, 29.21 [...] |
| BP2326 protein network | https://string-db.org/network/257313.BP2326 | Putative polysaccharide deacetylase; Similar to Xylella fastidiosa hypothetical protein Xf0878 TR:Q9PF00 (EMBL:AE003927) (257 aa) fasta scores: E(): 2.5e-36, 47.89% id in 238 aa, and to Streptomy [...] |
| BP2327 protein network | https://string-db.org/network/257313.BP2327 | Similar to many eg. Escherichia coli outer-membrane protein YhbX precursor or b3173 SW:YHBX_ECOLI (P42640) (541 aa) fasta scores: E(): 4.4e-53, 36.45% id in 480 aa. |
| BP2328 protein network | https://string-db.org/network/257313.BP2328 | Putative transferase; May be involved in LPS biosynthesis. Similar to Deinococcus radiodurans conserved hypothetical protein dr1555 TR:Q9RU40 (EMBL:AE001999) (411 aa) fasta scores: E(): 1.8e-12, [...] |
| BP2329 protein network | https://string-db.org/network/257313.BP2329 | Putative transferase; May be involved in LPS biosynthesis. Similar to many eg. Haemophilus ducreyi beta 1-4 glucosyltransferase LgtF TR:Q9L875 (EMBL:AF215936) (252 aa) fasta scores: E(): 5.2e-38, [...] |
| BP2330 protein network | https://string-db.org/network/257313.BP2330 | Similar to many eg. Xylella fastidiosa hypothetical protein Xf1469 xf1469 TR:Q9PDB0 (EMBL:AE003977) (284 aa) fasta scores: E(): 1.4e-61, 56.02% id in 282 aa. |
| BP2331 protein network | https://string-db.org/network/257313.BP2331 | Putative transferase; May be involved in LPS biosynthesis. Similar to Xylella fastidiosa hypothetical protein Xf1470 TR:Q9PDA9 (EMBL:AE003977) (376 aa) fasta scores: E(): 7e-29, 44.41% id in 376 [...] |
| dnaE protein network | https://string-db.org/network/257313.BP2332 | Similar to many eg. Escherichia coli DNA polymerase III alpha subunit DnaE or PolC or b0184 SW:DP3A_ECOLI (P10443) (1160 aa) fasta scores: E(): 0, 48.89% id in 1176 aa. Its C-terminal region is a [...] |
| BP2333 protein network | https://string-db.org/network/257313.BP2333 | Putative dioxygenase; Similar to Xylella fastidiosa aspartyl/asparaginyl beta-hydroxylase xf2100 TR:Q9PBP0 (EMBL:AE004025) (301 aa) fasta scores: E(): 2.1e-76, 57.33% id in 300 aa, and to Salmone [...] |
| BP2334 protein network | https://string-db.org/network/257313.BP2334 | Putative ATP-dependent helicase; Similar to Pseudomonas aeruginosa probable ATP-dependent helicase pa3297 TR:Q9HYU6 (EMBL:AE004752) (1326 aa) fasta scores: E(): 1.4e-181, 47.69% id in 1325 aa, an [...] |
| argA protein network | https://string-db.org/network/257313.BP2335 | Similar to Pseudomonas aeruginosa amino-acid acetyltransferase ArgA or pa5204 SW:ARGA_PSEAE (P22567) (432 aa) fasta scores: E(): 2.8e-71, 45.7% id in 431 aa, and to Escherichia coli amino-acid ac [...] |
| BP2336 protein network | https://string-db.org/network/257313.BP2336 | Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic en [...] |
| BP2337 protein network | https://string-db.org/network/257313.BP2337 | Putative phospholipase; Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN or pa3319 SW:PHLN_PSEAE (P15713) (692 aa) fasta scores: E(): 1.9e-64, 45.1% id in 674 aa. |
| BP2338 protein network | https://string-db.org/network/257313.BP2338 | Putative transport protein; Similar to proteins thought to be involved in phosphate transport eg. Pseudomonas putida phosphate transport system protein PhoU SW:PHOU_PSEPU (Q9Z410) (256 aa) fasta [...] |
| rpiA protein network | https://string-db.org/network/257313.BP2339 | Ribose 5-phosphate isomerase a; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. |
| BP2340 protein network | https://string-db.org/network/257313.BP2340 | Putative acyl-CoA dehydrogenase; Similar to Escherichia coli AidB protein or b4187 SW:AIDB_ECOLI (P33224) (541 aa) fasta scores: E(): 2.3e-87, 48% id in 550 aa. |
| BP2341 protein network | https://string-db.org/network/257313.BP2341 | Conserved hypothetical lipoprotein; Similar to Xylella fastidiosa hypothetical protein Xf0413 TR:Q9PG89 (EMBL:AE003892) (456 aa) fasta scores: E(): 1.9e-67, 50.8% id in 437 aa, and to Streptococc [...] |
| BP2342 protein network | https://string-db.org/network/257313.BP2342 | Hypothetical protein; Weakly similar to Escherichia coli O157:H7 EDL933 hypothetical protein YrbL TR:AAG58341 (EMBL:AE005548) (210 aa) fasta scores: E(): 0.023, 26.57% id in 207 aa. Also similar [...] |
| BP2343 protein network | https://string-db.org/network/257313.BP2343 | Putative methypurine-DNA glycosylase; Similar to Pseudomonas aeruginosa hypothetical protein Pa4010 TR:Q9HX17 (EMBL:AE004818) (239 aa) fasta scores: E(): 2.1e-65, 70.48% id in 227 aa. Also some s [...] |
| BP2344 protein network | https://string-db.org/network/257313.BP2344 | Similar to many eg. Xylella fastidiosa hypothetical protein Xf0115 TR:Q9PH31 (EMBL:AE003865) (124 aa) fasta scores: E(): 1.9e-19, 49.12% id in 114 aa, and to Rhizobium meliloti hypothetical prote [...] |
| BP2345 protein network | https://string-db.org/network/257313.BP2345 | Putative inner membrane permease polyamine transport protein; Similar to Escherichia coli putrescine transport system permease protein PotI or b0857 SW:POTI_ECOLI (P31136) (281 aa) fasta scores: [...] |
| BP2346 protein network | https://string-db.org/network/257313.BP2346 | Putative inner membrane permease polyamine transport protein; Similar to Pseudomonas aeruginosa polyamine transport protein PotH or pa0303 TR:Q9I6I8 (EMBL:AE004468) (293 aa) fasta scores: E(): 1. [...] |
| potA protein network | https://string-db.org/network/257313.BP2347 | Putative polyamine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. |
| BP2348 protein network | https://string-db.org/network/257313.BP2348 | Putative polyamine transport protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. |
| kdkA protein network | https://string-db.org/network/257313.BP2349 | Conserved hypothetical protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein [...] |
| BP2350 protein network | https://string-db.org/network/257313.BP2350 | Globin-like protein; Similar to Burkholderia pseudomallei putative globin TR:AAK38159 (EMBL:AY030274) (170 aa) fasta scores: E(): 7.6e-35, 60% id in 140 aa, and to Mycobacterium tuberculosis, and [...] |
| BP2351 protein network | https://string-db.org/network/257313.BP2351 | Putative inner membrane transport permease; Similar to Pseudomonas aeruginosa hypothetical protein Pa2858 TR:Q9HZY6 (EMBL:AE004712) (830 aa) fasta scores: E(): 7.8e-109, 42.34% id in 836 aa. |
| BP2352 protein network | https://string-db.org/network/257313.BP2352 | Similar to Rhizobium meliloti putative C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide Smb21438 TR:CAC49667 (EMBL:AL603646) (332 aa) fasta scores: E() [...] |
| BP2353 protein network | https://string-db.org/network/257313.BP2353 | Putative inner membrane transport protein; Similar to Bacillus halodurans c4-dicarboxylate transport system Bh0702 TR:Q9KEZ7 (EMBL:AP001509) (177 aa) fasta scores: E(): 1.8e-08, 29.16% id in 144 [...] |
| BP2354 protein network | https://string-db.org/network/257313.BP2354 | Putative inner membrane protein; Similar to Bacillus halodurans C4-dicarboxylate transport system Bh2671 TR:Q9K9H6 (EMBL:AP001516) (426 aa) fasta scores: E(): 2.1e-63, 43.26% id in 416 aa, and to [...] |
| BP2355 protein network | https://string-db.org/network/257313.BP2355 | Transposase for IS481 element. |
| gltA protein network | https://string-db.org/network/257313.BP2358 | Putative membrane protein (pseudogene); Signal peptide predicted for BP2356 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.447 between residues 33 and 34; B [...] |
| BP2359 protein network | https://string-db.org/network/257313.BP2359 | Conserved hypothetical protein; Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0760 TR:Q9I5G9 (EMBL:AE004511) (84 aa) fasta scores: E(): 5.6e-05, 36.47% id in 85 aa, and to Vib [...] |
| sdhB protein network | https://string-db.org/network/257313.BP2360 | Similar to Escherichia coli succinate dehydrogenase iron-sulfur protein SdhB or b0724 SW:DHSB_ECOLI (P07014) (238 aa) fasta scores: E(): 3.3e-62, 64.25% id in 235 aa, and to Rhodoferax fermentans [...] |
| sdhA protein network | https://string-db.org/network/257313.BP2361 | Similar to Escherichia coli, and succinate dehydrogenase flavoprotein subunit SdhA or b0723 or z0877 or ecs0748 SW:DHSA_ECOLI (P10444) (588 aa) fasta scores: E(): 2.8e-132, 57.92% id in 587 aa, a [...] |
| sdhD protein network | https://string-db.org/network/257313.BP2362 | Similar to Escherichia coli succinate dehydrogenase hydrophobic membrane anchor protein SdhD or b0722 SW:DHSD_ECOLI (P10445) (115 aa) fasta scores: E(): 1.2e-08, 35.45% id in 110 aa, and to Rhodo [...] |
| sdhC protein network | https://string-db.org/network/257313.BP2363 | Similar to Escherichia coli, and succinate dehydrogenase cytochrome B-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SW:DHSC_ECOLI (P10446) (129 aa) fasta scores: E(): 1.7e-06, 27.27% id i [...] |
| BP2364 protein network | https://string-db.org/network/257313.BP2364 | Similar to Deinococcus radiodurans transcriptional regulator, GntR family Dra0211 TR:Q9RYU6 (EMBL:AE001863) (279 aa) fasta scores: E(): 2.9e-18, 35.71% id in 238 aa, and to Streptomyces coelicolo [...] |
| mdH protein network | https://string-db.org/network/257313.BP2365 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. |
| prpC protein network | https://string-db.org/network/257313.BP2368 | Probable methylisocitrate lyase (pseudogene); (C)4 inpertussis; (C)2 in parapertussis and bronchiseptica; Belongs to the citrate synthase family. |
| acnA-2 protein network | https://string-db.org/network/257313.BP2369 | Aconitate hydratase; Similar to Alcaligenes eutrophus probable methyl-cis-aconitic acid hydratase AcnM TR:AAL03990 (EMBL:AF325554) (869 aa) fasta scores: E(): 0, 83.96% id in 867 aa, and to Esche [...] |
| BP2370 protein network | https://string-db.org/network/257313.BP2370 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus hypothetical 41.5 kDa protein TR:AAL03991 (EMBL:AF325554) (396 aa) fasta scores: E(): 3.3e-118, 78.28% id in 396 aa, and to Pseudo [...] |
| prpD protein network | https://string-db.org/network/257313.BP2371 | Similar to Escherichia coli 2-methylcitrate dehydratase PrpD or b0334 SW:PRPD_ECOLI (P77243) (483 aa) fasta scores: E(): 4e-166, 79.66% id in 477 aa, and to Alcaligenes eutrophus PrpD TR:AAL03992 [...] |
| BP2372 protein network | https://string-db.org/network/257313.BP2372 | Putative conserved inner membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0661 TR:Q9I5R0 (EMBL:AE004501) (140 aa) fasta scores: E(): 1.2e-26, 49.28% id in 140 aa, and to [...] |
| BP2373 protein network | https://string-db.org/network/257313.BP2373 | Conserved hypothetical protein; Similar to Neisseria meningitidis Tou5 TR:Q9RMM0 (EMBL:AF194079) (380 aa) fasta scores: E(): 1.2e-58, 43.53% id in 379 aa. Also similar to the N-terminal portion o [...] |
| BP2374 protein network | https://string-db.org/network/257313.BP2374 | Hypothetical protein; No significant database matches. |
| BP2376 protein network | https://string-db.org/network/257313.BP2376 | Conserved hypothetical protein (Pseudogene); (C)6 in pertussis; (C)7 in parapertussis and bronchiseptica. |
| BP2377 protein network | https://string-db.org/network/257313.BP2377 | Putative AMP-binding protein; Similar to many predicted fatty-acid-CoA ligases eg. Rhizobium meliloti putative fatty-acid-CoA ligase protein Smc00741 TR:CAC47210 (EMBL:AL591791) (548 aa) fasta sc [...] |
| BP2378 protein network | https://string-db.org/network/257313.BP2378 | Putative transferase; Similar to Caulobacter crescentus bacterial transferase family protein cc2643 TR:Q9A526 (EMBL:AE005932) (176 aa) fasta scores: E(): 2.7e-29, 49.71% id in 173 aa, and to Esch [...] |
| hslO protein network | https://string-db.org/network/257313.BP2379 | Putative chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacteria [...] |
| BP2380 protein network | https://string-db.org/network/257313.BP2380 | Putative periplasmic protein; No significant database matches. |
| BP2381 protein network | https://string-db.org/network/257313.BP2381 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr0979 protein TR:Q98LL3 (EMBL:AP002996) (138 aa) fasta scores: E(): 1.7e-09, 36.15% id in 130 aa, and to Agrobacterium tumefaciens strC [...] |
| BP2382 protein network | https://string-db.org/network/257313.BP2382 | Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC [...] |
| BP2383 protein network | https://string-db.org/network/257313.BP2383 | Similar to many eg. Rhizobium meliloti hypothetical protein Smb20701 TR:CAC49808 (EMBL:AL603647) (250 aa) fasta scores: E(): 1e-59, 68.67% id in 249 aa, and to Streptomyces coelicolor conserved h [...] |
| BP2384 protein network | https://string-db.org/network/257313.BP2384 | Putative transcriptional regulator; Similar to many from Rhizobium spp., one of which (SW:CYA3_RHIME) lies alongside an adenylate cyclase. It seems possible that many of the Rhizobium spp. protei [...] |
| ftsB protein network | https://string-db.org/network/257313.BP2385 | Putative conserved inner membrane protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell di [...] |
| eno protein network | https://string-db.org/network/257313.BP2386 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. |
| BP2387 protein network | https://string-db.org/network/257313.BP2387 | Similar to Rhizobium meliloti hypothetical protein Smc00411 TR:CAC41768 (EMBL:AL591783) (95 aa) fasta scores: E(): 8.3e-08, 38.46% id in 91 aa, and to Agrobacterium tumefaciens strC58 Agr_c_513p [...] |
| kdsA protein network | https://string-db.org/network/257313.BP2388 | Similar to many eg. Escherichia coli 2-dehydro-3-deoxyphosphooctonate aldolase KdsA or b1215 SW:KDSA_ECOLI (P17579) (284 aa) fasta scores: E(): 1.6e-45, 44.87% id in 283 aa, and to Xylella fastid [...] |
| pyrG protein network | https://string-db.org/network/257313.BP2389 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...] |
| BP2390 protein network | https://string-db.org/network/257313.BP2390 | Transposase for IS481 element. |
| BP2391 protein network | https://string-db.org/network/257313.BP2391 | Putative aminopeptidase; Similar to many (pro- and eukaryotic) eg. Neisseria meningitidis aminopeptidase, putative nmb1428 TR:Q9JYU4 (EMBL:AE002492) (598 aa) fasta scores: E(): 4.4e-121, 53.83% i [...] |
| BP2393 protein network | https://string-db.org/network/257313.BP2393 | Putative transport protein (pseudogene); 8 bp deletion in pertussis relative to parapertussis and bronchiseptica. |
| BP2394 protein network | https://string-db.org/network/257313.BP2394 | Similar to Escherichia coli hypothetical ABC transporter permease protein YliD or b0832 SW:YLID_ECOLI (P75799) (303 aa) fasta scores: E(): 1.4e-80, 71.88% id in 281 aa, and to Bacillus firmus dip [...] |
| BP2395 protein network | https://string-db.org/network/257313.BP2395 | Similar to Escherichia coli hypothetical ABC transporter permease protein YliC or b0831 SW:YLIC_ECOLI (P75798) (306 aa) fasta scores: E(): 9.4e-92, 76.47% id in 306 aa, and to Bacillus subtilis d [...] |
| BP2396 protein network | https://string-db.org/network/257313.BP2396 | Putative binding-protein-dependent transport periplasmic protein; Similar to Escherichia coli putative binding protein YliB precursor or b0830 SW:YLIB_ECOLI (P75797) (512 aa) fasta scores: E(): 1 [...] |
| BP2397 protein network | https://string-db.org/network/257313.BP2397 | Putative ABC transporter ATP-binding subunit; Similar to Agrobacterium tumefaciens strC58 Agr_l_685p TR:AAK88917 (EMBL:AE008234) (606 aa) fasta scores: E(): 3.4e-108, 55.39% id in 621 aa, and to [...] |
| BP2398 protein network | https://string-db.org/network/257313.BP2398 | Putative L-asparaginase; Similar to Vibrio cholerae asparaginase, putative vc2603 TR:Q9KNX7 (EMBL:AE004327) (326 aa) fasta scores: E(): 4.2e-47, 48.75% id in 320 aa, and to Lupinus luteus L-aspar [...] |
| BP2399 protein network | https://string-db.org/network/257313.BP2399 | Similar to Clostridium acetobutylicum transcriptional regulators, RpiR family cac1850 TR:Q97I06 (EMBL:AE007693) (293 aa) fasta scores: E(): 1.3e-17, 33.46% id in 263 aa. |
| BP2400 protein network | https://string-db.org/network/257313.BP2400 | Similar to Deinococcus radiodurans CoA transferase, subunit B dra0067 TR:Q9RZ87 (EMBL:AE001862) (209 aa) fasta scores: E(): 6.4e-61, 80.09% id in 211 aa, and to Helicobacter pylori succinyl-coa:3 [...] |
| BP2402 protein network | https://string-db.org/network/257313.BP2402 | ScanRegExp hit to PS01273, Coenzyme A transferases signature 1. |
| BP2403 protein network | https://string-db.org/network/257313.BP2403 | Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. |
| BP2404 protein network | https://string-db.org/network/257313.BP2404 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5343 TR:Q9HTL5 (EMBL:AE004946) (283 aa) fasta scores: E(): 2.3e-30, 42.6% id in 284 aa, and to Escherichia coli, and protein YeeZ precurso [...] |
| BP2405 protein network | https://string-db.org/network/257313.BP2405 | Putative cytochrome p450 oxidoreductase; Similar to Streptomyces galilaeus AknT TR:Q9L4U5 (EMBL:AF264025) (443 aa) fasta scores: E(): 0.0076, 28.02% id in 389 aa, and to Rhodococcus fascians cyto [...] |
| BP2406 protein network | https://string-db.org/network/257313.BP2406 | Conserved hypothetical protein; Similar to Rhizobium loti Mll4602 protein TR:Q98DQ1 (EMBL:AP003004) (114 aa) fasta scores: E(): 9.8e-29, 69.36% id in 111 aa. |
| ltaE protein network | https://string-db.org/network/257313.BP2407 | Similar to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 8.3e-65, 55.49% id in 337 aa, and to Pseudomonas aerugin [...] |
| BP2408 protein network | https://string-db.org/network/257313.BP2408 | Putative integral membrane protein; Similar to several including: Escherichia coli O157:H7 EDL933 hypothetical protein YijE TR:AAG59144 (EMBL:AE005625) (312 aa) fasta scores: E(): 5.7e-41, 44.01% [...] |
| acsA protein network | https://string-db.org/network/257313.BP2409 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step [...] |
| BP2411 protein network | https://string-db.org/network/257313.BP2411 | Putative integral membrane protein (pseudogene); AA in pertussis; AA(TA) in parapertussis and bronchiseptica. |
| BP2414 protein network | https://string-db.org/network/257313.BP2414 | Similar to Campylobacter jejuni hypothetical protein Cj1384C TR:Q9PMR6 (EMBL:AL139078) (104 aa) fasta scores: E(): 0.0014, 30.58% id in 85 aa and to Clostridium acetobutylicum predicted diverged [...] |
| BP2416 protein network | https://string-db.org/network/257313.BP2416 | Similar to several LysR-family transcriptional regulators including: Pseudomonas aeruginosa CysB or pa1754 TR:O05926 (EMBL:U95379) (324 aa) fasta scores: E(): 1.6e-49, 46.45% id in 310 aa and to [...] |
| BP2417 protein network | https://string-db.org/network/257313.BP2417 | Putative oxidoreductase; Highly similar to Eukaryotic methylmalonate semi-aldehyde dehydrogenases. Note as you would expect the predicted product of this CDS lacks the N-terminal Mitochondrial ta [...] |
| BP2418 protein network | https://string-db.org/network/257313.BP2418 | Similar to many members of the ABC family of transport proteins incuding: Rhizobium meliloti putative periplasmic binding ABC transporter protein Smc03121 TR:CAC47551 (EMBL:AL591792) (401 aa) fas [...] |
| BP2419 protein network | https://string-db.org/network/257313.BP2419 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3711 SWALL:Q9HXT0 (EMBL:AE004790) (301 aa) fasta scores: E(): 7.6e-46, 43.37% id in 302 aa, and to Rhizobium meliloti putati [...] |
| BP2420 protein network | https://string-db.org/network/257313.BP2420 | Putative integral membrane protein; Similar to Neisseria meningitidis hypothetical protein Nmb1570 TR:Q9JYI6 (EMBL:AE002507) (371 aa) fasta scores: E(): 1.6e-33, 32.86% id in 359 aa and to Neisse [...] |
| pepA protein network | https://string-db.org/network/257313.BP2421 | Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. |
| BP2422 protein network | https://string-db.org/network/257313.BP2422 | Similar to Rhizobium meliloti hypothetical protein Smc00586 TR:CAC45735 (EMBL:AL591786) (149 aa) fasta scores: E(): 8.8e-06, 29.8% id in 151 aa and weakly to Escherichia coli DNA polymerase III, [...] |
| BP2423 protein network | https://string-db.org/network/257313.BP2423 | Hypothetical protein; No significant database hits. |
| BP2424 protein network | https://string-db.org/network/257313.BP2424 | Putative integral membrane protein; Similar to several including: Escherichia coli hypothetical protein YccA or b0970 SW:YCCA_ECOLI (P06967) (219 aa) fasta scores: E(): 3.5e-22, 42.38% id in 210 [...] |
| BP2425 protein network | https://string-db.org/network/257313.BP2425 | Putative exported protein; Similar in parts to Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.2e-45, 43.75% id in 320 aa, and to Alcalig [...] |
| BP2426 protein network | https://string-db.org/network/257313.BP2426 | Conserved hypothetical protein; Weakly similar to several proteins of undefined function including: Agrobacterium tumefaciens StrC58 TR:AAK90609 (EMBL:AE007893) (335 aa) fasta scores: E(): 5.1e-1 [...] |
| BP2428 protein network | https://string-db.org/network/257313.BP2428 | Transposase for IS481 element (pseudogene); HMMPfam hit to PF00291, Pyridoxal-phosphate dependent enzyme; Belongs to the LysR transcriptional regulatory family. |
| BP2429 protein network | https://string-db.org/network/257313.BP2429 | Hypothetical protein; Involved in DNA repair and RecF pathway recombination. |
| era protein network | https://string-db.org/network/257313.BP2430 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in [...] |
| rnc protein network | https://string-db.org/network/257313.BP2431 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...] |
| lep protein network | https://string-db.org/network/257313.BP2432 | Signal peptidase I; Previously sequenced Bordetella pertussis leader peptidase Lep TR:Q9RN42 (EMBL:AF188620) (294 aa) fasta scores: E(): 1.9e-121, 100% id in 294 aa. Highly similar to Escherichia [...] |
| lepA protein network | https://string-db.org/network/257313.BP2433 | GTP-binding protein; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon bac [...] |
| mucD protein network | https://string-db.org/network/257313.BP2434 | Serine protease; Similar to Pseudomonas aeruginosa serine protease MucD or Pa0766 TR:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.4e-63, 45.88% id in 486 aa and to Azotobacter vinelandii Mu [...] |
| mucB protein network | https://string-db.org/network/257313.BP2435 | Putative sigma factor regulatory protein; Similar to many regulators of rpoE/algU which is located upstream, including: Azotobacter vinelandii MucB TR:Q9RCH6 (EMBL:U22660) (317 aa) fasta scores: [...] |
| BP2436 protein network | https://string-db.org/network/257313.BP2436 | Putative membrane protein; No significant database hits. |
| sigE protein network | https://string-db.org/network/257313.BP2437 | Similar to many RNA polymerase sigma factors including: Pseudomonas aeruginosa AlgU or AlgT or Pa0762 SW:RPSH_PSEAE (Q06198) (193 aa) fasta scores: E(): 1.3e-40, 63.02% id in 192 aa and to Escher [...] |
| BP2438 protein network | https://string-db.org/network/257313.BP2438 | Putative integral membrane protein; Weakly similar to Gallus gallus transport associated protein 2 Tap2 TR:O73903 (EMBL:AL023516) (701 aa) fasta scores: E(): 1.6, 32.21% id in 149 aa and to Strep [...] |
| fabF protein network | https://string-db.org/network/257313.BP2439 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. |
| acpP protein network | https://string-db.org/network/257313.BP2440 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. |
| fabG-4 protein network | https://string-db.org/network/257313.BP2441 | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...] |
| fabD protein network | https://string-db.org/network/257313.BP2442 | Highly similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 SW:FABD_ECOLI (P25715) (308 aa) fasta scores: E(): 2.9e-55, 58.36% id in 305 aa and to Salmo [...] |
| fabH protein network | https://string-db.org/network/257313.BP2443 | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...] |
| plsX protein network | https://string-db.org/network/257313.BP2444 | Putative fatty acid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl [...] |
| rpmF protein network | https://string-db.org/network/257313.BP2445 | Similar to Neisseria meningitidis 50s ribosomal protein l32 RpmF or Nma0544 SW:RL32_NEIMA (Q9JW52) (58 aa) fasta scores: E(): 1e-15, 70.69% id in 58 aa and Pseudomonas aeruginosa 50s ribosomal pr [...] |
| BP2446 protein network | https://string-db.org/network/257313.BP2446 | Conserved hypothetical protein; Weakly similar to Neisseria meningitidis hypothetical protein Nma0545 TR:Q9JW51 (EMBL:AL162753) (167 aa) fasta scores: E(): 2e-07, 30.38% id in 181 aa and to Esche [...] |
| Maf-2 protein network | https://string-db.org/network/257313.BP2447 | Conserved hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation o [...] |
| BP2448 protein network | https://string-db.org/network/257313.BP2448 | Conserved hypothetical protein; Similar to many including: Neisseria meningitidis hypothetical protein Nmb1908 TR:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): 2.4e-36, 47.45% id in 236 aa. [...] |
| BP2449 protein network | https://string-db.org/network/257313.BP2449 | Putative exported hydrolase; Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SW:YBJR_ECOLI (P75820) (276 aa) fasta scores: E(): 7.3e-29, 43.79% id in 274 aa, [...] |
| BP2451 protein network | https://string-db.org/network/257313.BP2451 | C-terminal region of a putative membrane protein (pseudogene); 5 probable transmembrane helices predicted for BP2450 by TMHMM2.0 at aa 249-271, 284-303, 308-325, 332-354 and 364-381. |
| BP2452 protein network | https://string-db.org/network/257313.BP2452 | Conserved hypothetical protein; Similar to several including: Vibrio cholerae hypothetical protein Vc2355 vc2355 TR:Q9KPL2 (EMBL:AE004305) (257 aa) fasta scores: E(): 1.3e-51, 51.56% id in 256 aa [...] |
| BP2453 protein network | https://string-db.org/network/257313.BP2453 | Transposase for IS481 element. |
| BP2454 protein network | https://string-db.org/network/257313.BP2454 | Putative oxidoreductase; Similar to Alcaligenes eutrophus D-beta-hydroxybutyrate dehydrogenase HbdH1 SW:BDHA_ALCEU (Q9X6U2) (258 aa) fasta scores: E(): 7.9e-57, 63.84% id in 260 aa and to Rhizobi [...] |
| BP2455 protein network | https://string-db.org/network/257313.BP2455 | Putative membrane efflux protein; Similar to Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB or b3350 SW:KEFB_ECOLI (P45522) (601 aa) fasta scores: E(): 2.2e-5 [...] |
| alcA protein network | https://string-db.org/network/257313.BP2456 | Alcaligin biosynthesis enzyme; Previously sequenced in Bordetella bronchiseptica alcaligin biosynthesis enzyme AlcA SW:ALCA_BORBR (Q44740) (461 aa) fasta scores: E(): 1.4e-197, 100% id in 461 aa. [...] |
| alcB protein network | https://string-db.org/network/257313.BP2457 | Alcaligin biosynthesis protein; Previously sequenced in Bordetella bronchiseptica AlcB iron siderophore alcaligin biosynthetic protein TR:P94254 (EMBL:U61153) (201 aa) fasta scores: E(): 7.8e-87, [...] |
| alcC protein network | https://string-db.org/network/257313.BP2458 | Alcaligin biosynthesis protein; Previously sequenced in Bordetella bronchiseptica AlcC iron siderophore alcaligin biosynthesis protein TR:P94255 (EMBL:U61153) (618 aa) fasta scores: E(): 0, 99.83 [...] |
| alcD protein network | https://string-db.org/network/257313.BP2459 | Hypothetical protein; Previously sequenced in Bordetella bronchiseptica hypothetical protein AlcD predicted to be involved in the iron siderophore alcaligin biosynthesis TR:O52832 (EMBL:AJ000061) [...] |
| alcE protein network | https://string-db.org/network/257313.BP2460 | Putative iron-sulfur protein; Previously sequenced in Bordetella bronchiseptica AlcE, involved in the iron siderophore alcaligin biosynthesis, TR:O52833 (EMBL:AJ000061) (397 aa) fasta scores: E() [...] |
| alcR protein network | https://string-db.org/network/257313.BP2461 | Transcriptional regulator; Previously sequenced Bordetella pertussis AlcR the regulator of alcaligin siderophore biosynthesis TR:O52066 (EMBL:AF018255) (324 aa) fasta scores: E(): 3.4e-130, 100% [...] |
| bcr protein network | https://string-db.org/network/257313.BP2462 | Putative drug resistance translocase; Previously sequenced in Bordetella bronchiseptica Bcr protein TR:O52835 (EMBL:AJ000061) (110 aa) fasta scores: E(): 4.8e-35, 96.36% id in 110 aa. Note the di [...] |
| fauA protein network | https://string-db.org/network/257313.BP2463 | Previously sequenced Bordetella pertussis ferric alcaligin siderophore receptor FauA TR:Q9X6A5 (EMBL:AF135154) (734 aa) fasta scores: E(): 0, 100% id in 734 aa. |
| mar protein network | https://string-db.org/network/257313.BP2464 | Possible membrane efflux protein; Similar to many proteins involved in multiple antibiotic resistance including: Salmonella typhimurium multiple antibiotic resistance protein MarC SW:MARC_SALTY ( [...] |
| BP2465 protein network | https://string-db.org/network/257313.BP2465 | Hypothetical protein; Database similarities to the predicted product o fthis CDS covers a region defined by the PFAM motif PF00990, GGDEF domain, the function of which is unknown. Similar in part [...] |
| BP2466 protein network | https://string-db.org/network/257313.BP2466 | Hypothetical protein; No siginificant database matches. |
| BP2467 protein network | https://string-db.org/network/257313.BP2467 | Hypothetical protein; Weakly similar to Xylella fastidiosa phage-related protein Xf0485 TR:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 3e-06, 29.18% id in 185 aa. |
| vrg-6 protein network | https://string-db.org/network/257313.BP2468 | Virulence protein; Previously sequenced Bordetella pertussis virulence related protein, Vrg-6 TR:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 4.2e-36, 100% id in 105 aa. |
| BP2469 protein network | https://string-db.org/network/257313.BP2469 | Hypothetical protein; No significant database hits. |
| serS protein network | https://string-db.org/network/257313.BP2470 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...] |
| BP2471 protein network | https://string-db.org/network/257313.BP2471 | Similar to Burkholderia solanacearum conserved hypothetical protein Rsc2338 TR:CAD16045 (EMBL:AL646069) (449 aa) fasta scores: E(): 1e-98, 67.92% id in 452 aa, and to Salmonella enterica subspent [...] |
| lolA protein network | https://string-db.org/network/257313.BP2472 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-term [...] |
| ftsK protein network | https://string-db.org/network/257313.BP2473 | Putative cell division protein; Similar to many including: Burkholderia solanacearum probable cell division transmembrane protein FtsK TR:CAD16048 (EMBL:AL646069) (781 aa) fasta scores: E(): 1.1e [...] |
| trxB protein network | https://string-db.org/network/257313.BP2474 | Similar to Escherichia coli thioredoxin reductase TrxB or b0888 or z1232 or Ecs0973 SW:TRXB_ECOLI (P09625) (320 aa) fasta scores: E(): 1e-84, 71.65% id in 314 aa, and to Vibrio cholerae thioredox [...] |
| BP2475 protein network | https://string-db.org/network/257313.BP2475 | Hypothetical protein; Similar to several including: Xylella fastidiosa hypothetical protein Xf1295 TR:Q9PDT4 (EMBL:AE003963) (180 aa) fasta scores: E(): 1.4e-10, 37.85% id in 177 aa and to Neisse [...] |
| BP2476 protein network | https://string-db.org/network/257313.BP2476 | Putative mebrane transport protein; Similar to Escherichia coli quaternary ammonium compound-resistance protein QacE SW:QACE_ECOLI (Q57225) (110 aa) fasta scores: E(): 1.4e-20, 58.18% id in 110 a [...] |
| BP2477 protein network | https://string-db.org/network/257313.BP2477 | Transposase for IS481 element. |
| BP2478 protein network | https://string-db.org/network/257313.BP2478 | Putative membrane transport protein; Similar to Aquifex aeolicus Na Ssf or aq_2106 TR:O67873 (EMBL:AE000773) (487 aa) fasta scores: E(): 2e-25, 38.81% id in 572 aa and to Escherichia coli putativ [...] |
| BP2479 protein network | https://string-db.org/network/257313.BP2479 | Putative integral membrane protein; No significant database hits. |
| kdpA protein network | https://string-db.org/network/257313.BP2480 | Potassium-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of p [...] |
| kdpB protein network | https://string-db.org/network/257313.BP2481 | Potassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of p [...] |
| kdpC protein network | https://string-db.org/network/257313.BP2482 | Potassium-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of p [...] |
| kdpD protein network | https://string-db.org/network/257313.BP2483 | Similar to Escherichia coli sensor protein KdpD or b0695 SW:KDPD_ECOLI (P21865) (894 aa) fasta scores: E(): 1.2e-68, 46.35% id in 863 aa and to Burkholderia solanacearum probable two-component se [...] |
| kdpE protein network | https://string-db.org/network/257313.BP2484 | Similar to Escherichia coli Kdp operon (involved in potassium transport) transcriptional regulatory protein KdpE or b0694 SW:KDPE_ECOLI (P21866) (225 aa) fasta scores: E(): 2.9e-54, 63.8% id in 2 [...] |
| BP2485 protein network | https://string-db.org/network/257313.BP2485 | Transposase for IS481 element. |
| BP2486 protein network | https://string-db.org/network/257313.BP2486 | Putative exported protein; Weakly similar to Haemophilus influenzae hypothetical protein Hi0874 SW:Y874_HAEIN (P44067) (399 aa) fasta scores: E(): 1.4e-09, 22.42% id in 223 aa. |
| BP2487 protein network | https://string-db.org/network/257313.BP2487 | Hypothetical protein; Weakly similar to Aquifex aeolicus hypothetical 30.0 kDa protein Aq_362 TR:O66687 (EMBL:AE000686) (265 aa) fasta scores: E(): 1.1e-05, 29.38% id in 211 aa. |
| icd protein network | https://string-db.org/network/257313.BP2488 | Similar to Escherichia coli isocitrate dehydrogenase [NADP] Icd or IcdA or IcdE or b1136 SW:IDH_ECOLI (P08200) (416 aa) fasta scores: E(): 4.7e-116, 71.91% id in 413 aa, and to Pseudomonas aerugi [...] |
| BP2489 protein network | https://string-db.org/network/257313.BP2489 | Similar to Neisseria meningitidis hypothetical protein Nma1720 TR:Q9JTL8 (EMBL:AL162756) (156 aa) fasta scores: E(): 5.3e-17, 40.58% id in 138 aa. |
| BP2490 protein network | https://string-db.org/network/257313.BP2490 | Similar in parts to many cytochromes including: to Vibrio cholerae cytochrome C554 Vc2241 TR:Q9KPX1 (EMBL:AE004296) (107 aa) fasta scores: E(): 4.7e-06, 41.07% id in 112 aa and to Pseudomonas stu [...] |
| BP2491 protein network | https://string-db.org/network/257313.BP2491 | Similar in parts to many cytochromes including: Burkholderia solanacearum putative periplasmic cytochrome type-C oxidoreductase Srsc0999 TR:CAD14701 (EMBL:AL646062) (115 aa) fasta scores: E(): 3. [...] |
| BP2492 protein network | https://string-db.org/network/257313.BP2492 | Transposase for IS481 element. |
| BP2493 protein network | https://string-db.org/network/257313.BP2493 | Putative ATP-binding protein; Similar to many including: Burkholderia solanacearum conserved hypothetical protein Rsc0998 TR:CAD14700 (EMBL:AL646062) (290 aa) fasta scores: E(): 1.9e-79, 76.4% id [...] |
| BP2494 protein network | https://string-db.org/network/257313.BP2494 | Conserved hypothetical protein; Highly similar to several including: Rhizobium loti Mlr3961 protein TR:Q98F34 (EMBL:AP003003) (396 aa) fasta scores: E(): 8.7e-89, 57.97% id in 395 aa and to Pseud [...] |
| BP2495 protein network | https://string-db.org/network/257313.BP2495 | Conserved hypothetical protein; Similar to Staphylococcus aureus (strain N315) protein Sa2317 or Sav2529 TR:BAB58691 (EMBL:AP003137) (163 aa) fasta scores: E(): 1.3e-29, 47.53% id in 162 aa, Esch [...] |
| BP2496 protein network | https://string-db.org/network/257313.BP2496 | Hypothetical protein; No significant database hits. |
| BP2497 protein network | https://string-db.org/network/257313.BP2497 | Putative zinc protease; Similar to many proposed proteases including: Deinococcus radiodurans protease DR1598 TR:Q9RTZ9 (EMBL:AE002003) (951 aa) fasta scores: E(): 4.7e-130, 42.77% id in 886 aa a [...] |
| dnaJ protein network | https://string-db.org/network/257313.BP2498 | Molecular chaperone; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an aut [...] |
| dnaK protein network | https://string-db.org/network/257313.BP2499 | Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. |
| BP2500 protein network | https://string-db.org/network/257313.BP2500 | Weakly similar to several thioredoxins including: Rhodospirillum rubrum thioredoxin TrxA SW:THIO_RHORU (P10473) (104 aa) fasta scores: E(): 0.073, 27.000% id in 100 aa. |
| grpE protein network | https://string-db.org/network/257313.BP2501 | Putative GrpE chaperone; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is [...] |
| BP2502 protein network | https://string-db.org/network/257313.BP2502 | Hypothetical protein; No significant database hits. |
| hemH protein network | https://string-db.org/network/257313.BP2503 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. |
| hrcA protein network | https://string-db.org/network/257313.BP2504 | Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. |
| ppnK protein network | https://string-db.org/network/257313.BP2505 | Probable inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically t [...] |
| BP2506 protein network | https://string-db.org/network/257313.BP2506 | DNA repair protein; May be involved in recombinational repair of damaged DNA. |
| fur protein network | https://string-db.org/network/257313.BP2507 | Ferric ion uptake regulator; Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. |
| omlA protein network | https://string-db.org/network/257313.BP2508 | Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| dapB protein network | https://string-db.org/network/257313.BP2509 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. |
| murB protein network | https://string-db.org/network/257313.BP2510 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. |
| BP2511 protein network | https://string-db.org/network/257313.BP2511 | Putative hydrolase; Similar to several including: Caulobacter crescentus hydrolase, alpha/beta hydrolase fold family CC2797 TR:Q9A4N3 (EMBL:AE005945) (269 aa) fasta scores: E(): 1.9e-15, 28.782% [...] |
| BP2512 protein network | https://string-db.org/network/257313.BP2512 | Conserved hypothetical protein; Similar to several e.g. Bacillus subtilis hypothetical 47.8 kDa protein YxeQ or lp9I SW:YXEQ_BACSU (P54956) (445 aa) fasta scores: E(): 3.8e-31, 30.588% id in 425 [...] |
| BP2513 protein network | https://string-db.org/network/257313.BP2513 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-42, 38.889% id in 324 aa. |
| purU protein network | https://string-db.org/network/257313.BP2514 | Putative formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). |
| soxG protein network | https://string-db.org/network/257313.BP2515 | Weakly similar to Rhizobium loti sarcosine oxidase gamma subunit Mlr1276 TR:Q98KX5 (EMBL:AP002997) (195 aa) fasta scores: E(): 0.0011, 27.273% id in 187 aa. |
| soxA protein network | https://string-db.org/network/257313.BP2516 | Similar to Rhizobium meliloti sarcosine oxidase alpha subunit SoxA or r00083 or smc02606 SW:SOXA_RHIME (O87386) (987 aa) fasta scores: E(): 5.8e-146, 46.479% id in 994 aa; Belongs to the GcvT fam [...] |
| soxD protein network | https://string-db.org/network/257313.BP2517 | Similar to Rhizobium meliloti sarcosine oxidase delta subunit SoxD or r00084 or smc02607 SW:SOXD_RHIME (O87387) (92 aa) fasta scores: E(): 4.4e-14, 52.113% id in 71 aa. |
| soxB protein network | https://string-db.org/network/257313.BP2518 | Similar to Rhizobium meliloti sarcosine oxidase beta subunit SoxB or r00085 or smc02608 SW:SAOX_RHIME (O87388) (416 aa) fasta scores: E(): 7.9e-109, 64.269% id in 417 aa. |
| BP2519 protein network | https://string-db.org/network/257313.BP2519 | Similar to many putative and proven dipeptidases from Prokaryotes and Eukaryotes e.g Rhizobium meliloti putative dipeptidase protein Smc03264 TR:CAC47695 (EMBL:AL591792) (336 aa) fasta scores: E( [...] |
| BP2520 protein network | https://string-db.org/network/257313.BP2520 | Similar to many members of the LysR-family of regulatory proteins including: Mycobacterium marinum probable hydrogen peroxide-inducible genes activator OxyR SW:OXYR_MYCMR (O87324) (311 aa) fasta [...] |
| BP2521 protein network | https://string-db.org/network/257313.BP2521 | Putative dehydrogenase; Weakly similar to several including: Methanothermus fervidus malate dehydrogenase Mdh SW:MDH_METFE (P16142) (339 aa) fasta scores: E(): 7e-27, 31.212% id in 330 aa; Belong [...] |
| folD-2 protein network | https://string-db.org/network/257313.BP2522 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10 [...] |
| BP2523 protein network | https://string-db.org/network/257313.BP2523 | Putative exported protein; Similar to several proteins of undefined function e.g. Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.5e-28, 31.975% id in [...] |
| BP2524 protein network | https://string-db.org/network/257313.BP2524 | Transposase for IS481 element. |
| BP2525 protein network | https://string-db.org/network/257313.BP2525 | N-terminal region of a putative membrane protein (pseudogene); This CDS is disrupted by the insertion of IS481. The C-terminal region of this CDS is BP1081. |
| BP2526 protein network | https://string-db.org/network/257313.BP2526 | Probable secretory protein (pseudogene); HMMPfam hit to PF00498, FHA domain; Belongs to the bacterial secretin family. |
| BP2527 protein network | https://string-db.org/network/257313.BP2527 | Putative secretory protein; Weakly similar to several e.g. Rhizobium meliloti putative pilus assembly signal peptide protein TR:CAC41527 (EMBL:AL591782) (269 aa) fasta scores: E(): 0.014, 24.545% [...] |
| BP2528 protein network | https://string-db.org/network/257313.BP2528 | Putative exported protein; No significant database hits. |
| BP2529 protein network | https://string-db.org/network/257313.BP2529 | Putative exported protein (pseudogene); Signal peptide predicted for BP2528 by SignalP 2.0 HMM (Signal peptide probabilty 0.972) with cleavage site probability 0.678 between residues 30 and 31. |
| BP2530 protein network | https://string-db.org/network/257313.BP2530 | Integral membrane protein; Similar to the N-terminus of Xylella fastidiosa fimbrial protein xf2542 TR:Q9PAH6 (EMBL:AE004061) (148 aa) fasta scores: E(): 0.68, 36.364% id in 77 aa. |
| ecnB protein network | https://string-db.org/network/257313.BP2531 | Similar to Escherichia coli bacteriolytic toxin entericidin B precursor EcnB or B4147.2 SW:ECNB_ECOLI (P56549) (48 aa) fasta scores: E(): 0.0016, 44.444% id in 45 aa and Citrobacter freundii ente [...] |
| BP2532 protein network | https://string-db.org/network/257313.BP2532 | Conserved hypothetical protein; Similar to many proteins of unproven function including: Escherichia coli O157:H7 putative isomerase Ecs3029 TR:BAB36452 (EMBL:AP002560) (233 aa) fasta scores: E() [...] |
| ppa protein network | https://string-db.org/network/257313.BP2533 | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. |
| BP2534 protein network | https://string-db.org/network/257313.BP2534 | Putative exported protein; Weakly similar to several including: Escherichia coli HemY protein involved in porphyrin biosynthesis SW:HEMY_ECOLI (P09128) (398 aa) fasta scores: E(): 2.6e-09, 24.165 [...] |
| BP2535 protein network | https://string-db.org/network/257313.BP2535 | Putative exported protein; No significant database hits. |
| BP2536 protein network | https://string-db.org/network/257313.BP2536 | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. |
| HemC protein network | https://string-db.org/network/257313.BP2537 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. |
| BP2538 protein network | https://string-db.org/network/257313.BP2538 | Integral membrane protein; Similar to several e.g. Pseudomonas aeruginosa hypothetical protein Pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 6.1e-43, 52.790% id in 233 aa. Also sim [...] |
| BP2539 protein network | https://string-db.org/network/257313.BP2539 | Integral membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 pa1170 TR:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 1.1e-34, 51.092% id in 229 aa. Also similar t [...] |
| sucD protein network | https://string-db.org/network/257313.BP2540 | succinyl-CoA synthetase, alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repr [...] |
| sucC protein network | https://string-db.org/network/257313.BP2541 | Succinyl-CoA synthetase, beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repre [...] |
| BP2542 protein network | https://string-db.org/network/257313.BP2542 | Similar to Ralstonia solanacearum hypothetical protein Rsc0553 or Rs04912 SWALL:Q8Y1Y4 (EMBL:AL646059) (208 aa) fasta scores: E(): 1.3e-24, 48.14% id in 189 aa. |
| metE protein network | https://string-db.org/network/257313.BP2543 | 5-methyltetrahydropteroyltriglutamate--homocyst eine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; [...] |
| metR protein network | https://string-db.org/network/257313.BP2544 | Transcriptional regulatory protein; Similar to Pseudomonas putida transcriptional activator MetR TR:Q9AF88 (EMBL:AF363278) (309 aa) fasta scores: E(): 4e-71, 56.863% id in 306 aa, and to Escheric [...] |
| recX protein network | https://string-db.org/network/257313.BP2545 | RecX-family regulatory protein; Modulates RecA activity; Belongs to the RecX family. |
| recA protein network | https://string-db.org/network/257313.BP2546 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...] |
| BP2547 protein network | https://string-db.org/network/257313.BP2547 | Similar to many regulatory proteins including: Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 1.8e-36, 50.000% id in 220 aa and [...] |
| BP2548 protein network | https://string-db.org/network/257313.BP2548 | Similar to several two-component system, histidine kinases e.g. Rhizobium loti Mll7952 TR:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 1.3e-44, 37.360% id in 447 aa and Salmonella typhi Tct [...] |
| BP2549 protein network | https://string-db.org/network/257313.BP2549 | Putative sugar transport protein; Similar to several e.g. Caulobacter crescentus major facilitator family transporter protein Cc0980 TR:Q9A9K0 (EMBL:AE005775) (567 aa) fasta scores: E(): 2.3e-144 [...] |
| BP2550 protein network | https://string-db.org/network/257313.BP2550 | Putative enoyl-CoA hydratase; Similar to Sulfolobus tokodaii 254aa long hypothetical enoyl-CoA hydratase St0048 TR:BAB65003 (EMBL:AP000981) (254 aa) fasta scores: E(): 1e-16, 32.959% id in 267 aa [...] |
| BP2551 protein network | https://string-db.org/network/257313.BP2551 | Similar to many including: Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa0603 TR:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 1.5e-46, 46.006% id in 363 aa and [...] |
| BP2552 protein network | https://string-db.org/network/257313.BP2552 | Similar to many e.g. Rhizobium loti ABC transport system permease protein Mll3625 TR:Q98FT7 (EMBL:AP003002) (567 aa) fasta scores: E(): 4e-31, 26.964% id in 560 aa and Streptomyces coelicolor put [...] |
| BP2553 protein network | https://string-db.org/network/257313.BP2553 | Putative exported protein; Weakly similar to several e.g. Rhizobium loti ABC transporter, periplasmic substrate-binding protein Mll3626 TR:Q98FT6 (EMBL:AP003002) (328 aa) fasta scores: E(): 3.6e- [...] |
| fabG-5 protein network | https://string-db.org/network/257313.BP2554 | Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.5e-29, 41.597% id in 238 aa. |
| BP2555 protein network | https://string-db.org/network/257313.BP2555 | Conserved hypothetical protein; Similarover the whole range to proteins of unproven function e.g. Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): [...] |
| BP2556 protein network | https://string-db.org/network/257313.BP2556 | Weakly similar to many proteins of undefined function e.g. Thermoplasma acidophilum hypothetical protein Ta1457 ta1457 TR:Q9HI85 (EMBL:AL445067) (135 aa) fasta scores: E(): 0.018, 25.210% id in 1 [...] |
| BP2557 protein network | https://string-db.org/network/257313.BP2557 | Conserved hypothetical protein; Similar to many e.g. Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.6e-46, 43.669% id in 387 aa. |
| BP2558 protein network | https://string-db.org/network/257313.BP2558 | LysR-family transcriptional regulator; Similar to many e.g. Escherichia coli, and glycine cleavage system transcriptional activator GcvA or B2808 or Z4125 or Ecs3668 SW:GCVA_ECOLI (P32064) (305 a [...] |
| BP2559 protein network | https://string-db.org/network/257313.BP2559 | Hypothetical protein; Similar to many e.g. Escherichia coli hypothetical protein YfdE or B2371 SW:YFDE_ECOLI (P76518) (381 aa) fasta scores: E(): 5.3e-53, 37.333% id in 375 aa; Belongs to the CoA [...] |
| BP2560 protein network | https://string-db.org/network/257313.BP2560 | Putative exported protein; No significant database hits. |
| rdgC protein network | https://string-db.org/network/257313.BP2561 | Conserved hypothetical protein; May be involved in recombination; Belongs to the RdgC family. |
| pyrB-2 protein network | https://string-db.org/network/257313.BP2562 | Highly similar to Burkholderia cepacia aspartate transcarbamoylase PyrB TR:Q9F9H3 (EMBL:AF192346) (431 aa) fasta scores: E(): 3.2e-131, 77.136% id in 433 aa; Belongs to the aspartate/ornithine ca [...] |
| BP2563 protein network | https://string-db.org/network/257313.BP2563 | Putative integral membrane protein. |
| BP2564 protein network | https://string-db.org/network/257313.BP2564 | Putative lipoprotein; No significant database hits. |
| ecnA2 protein network | https://string-db.org/network/257313.BP2565 | Similar to many including: Escherichia coli anti-toxin entericidin A precursor EcnaA or B4147.1 SW:ECNA_ECOLI (P56548) (41 aa) fasta scores: E(): 0.29, 44.737% id in 38 aa, Rhizobium meliloti put [...] |
| BP2566 protein network | https://string-db.org/network/257313.BP2566 | Putative exported endonulease; Similar to many nucleases e.g. Escherichia coli O157:H7 EDL933 DNA-specific endonuclease I EndA TR:AAG58076 (EMBL:AE005525) (235 aa) fasta scores: E(): 2.4e-39, 47. [...] |
| BP2568 protein network | https://string-db.org/network/257313.BP2568 | Transposase for IS481 element. |
| BP2569 protein network | https://string-db.org/network/257313.BP2569 | Putative lipoprotein. |
| BP2570 protein network | https://string-db.org/network/257313.BP2570 | Putative exported protein; No significant database hits. |
| BP2571 protein network | https://string-db.org/network/257313.BP2571 | Putative transcriptional regulatory protein; Similar to in regions to possible DNA-binding domains of several proteins of undefined function e.g. Xylella fastidiosa hypothetical protein Xf0744 xf [...] |
| ihfA protein network | https://string-db.org/network/257313.BP2572 | Integration host factor alpha-subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tra [...] |
| pheT protein network | https://string-db.org/network/257313.BP2573 | Similar to Escherichia coli phenylalanyl-tRNA synthetase beta chain PheT or B1713 SW:SYFB_ECOLI (P07395) (795 aa) fasta scores: E(): 3.9e-126, 45.735% id in 809 aa. |
| pheS protein network | https://string-db.org/network/257313.BP2574 | Similar to Escherichia coli phenylalanyl-tRNA synthetase alpha chain PheS or B1714 SW:SYFA_ECOLI (P08312) (327 aa) fasta scores: E(): 1.5e-51, 56.928% id in 332 aa and to Pseudomonas aeruginosa p [...] |
| rplT protein network | https://string-db.org/network/257313.BP2575 | 50s ribosomal protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...] |
| rpmI protein network | https://string-db.org/network/257313.BP2576 | Similar to Pseudomonas syringae 50s ribosomal protein l35 RpmI SW:RL35_PSESY (P52830) (64 aa) fasta scores: E(): 1.9e-10, 58.065% id in 62 aa and to Neisseria meningitidis (serogroup A) putative [...] |
| BP2577 protein network | https://string-db.org/network/257313.BP2577 | Transposase for IS481 element. |
| dut protein network | https://string-db.org/network/257313.BP2578 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intrace [...] |
| BP2579 protein network | https://string-db.org/network/257313.BP2579 | Transposase for IS481 element. |
| BP2580 protein network | https://string-db.org/network/257313.BP2580 | Putative GntR-family regulatory protein; Similar to several including: Pseudomonas aeruginosa probable transcriptional regulator Pa2897 TR:Q9HZV0 (EMBL:AE004716) (479 aa) fasta scores: E(): 1e-58 [...] |
| BP2581 protein network | https://string-db.org/network/257313.BP2581 | Hypothetical protein; No significant database hits. |
| BP2582 protein network | https://string-db.org/network/257313.BP2582 | Transposase for IS481 element. |
| BP2585 protein network | https://string-db.org/network/257313.BP2585 | Putative membrane protein (pseudogene); CGG in pertussis; (-) deleted in parapertussis. |
| BP2586 protein network | https://string-db.org/network/257313.BP2586 | Integral membrane protein; Similar to several including: Pasteurella multocida hypothetical protein Pm0419 TR:Q9CNK9 (EMBL:AE006078) (345 aa) fasta scores: E(): 1.3e-69, 51.604% id in 343 aa, and [...] |
| BP2589 protein network | https://string-db.org/network/257313.BP2589 | Putative regulatory protein (pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. The 5' end of this CDS is missing following the IS481 insertion. Similar to several [...] |
| BP2590 protein network | https://string-db.org/network/257313.BP2590 | Similar to many putative regulatory proteins e.g. Streptomyces coelicolor putative LacI-family transcriptional regulator Sce65.21C TR:Q9RKF2 (EMBL:AL133236) (349 aa) fasta scores: E(): 7.7e-30, 3 [...] |
| BP2591 protein network | https://string-db.org/network/257313.BP2591 | ABC transport protein, ATP-binding component; Similar to many ABC transport proteins e.g. Mycobacterium tuberculosis CDC1551 peptide ABC transporter, ATP-binding protein, putative Mt3764 TR:AAK48 [...] |
| BP2592 protein network | https://string-db.org/network/257313.BP2592 | Similar to several ABC-transporter proteins including: Rhizobium loti ABC transporter permease protein Mlr5418 TR:Q98BU9 (EMBL:AP003006) (303 aa) fasta scores: E(): 1.8e-41, 43.396% id in 265 aa [...] |
| BP2593 protein network | https://string-db.org/network/257313.BP2593 | Similar to several including: Rhizobium sp probable peptide ABC transporter permease protein Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 8.8e-43, 39.936% id in 313 aa and Agrobacteriu [...] |
| BP2594 protein network | https://string-db.org/network/257313.BP2594 | Similar to several including: Rhizobium loti ABC transporter substrate binding protein Mll7247 TR:Q986Q9 (EMBL:AP003011) (505 aa) fasta scores: E(): 9.2e-37, 29.741% id in 501 aa and Escherichia [...] |
| BP2596 protein network | https://string-db.org/network/257313.BP2596 | Putative peptidase (Pseudogene); (G)12 in pertussis; GGGTGGG in parapertussis and bronchiseptica. |
| BP2597 protein network | https://string-db.org/network/257313.BP2597 | Putative membrane transport protein; Similar to several proteins of undefined function e.g. Rhizobium loti Mlr6177 protein TR:Q98A30 (EMBL:AP003008) (216 aa) fasta scores: E(): 7.8e-32, 52.427% i [...] |
| BP2598 protein network | https://string-db.org/network/257313.BP2598 | Conserved hypothetical protein; Similar to several including: Pseudomonas aeruginosa hypothetical protein Pa4182 TR:Q9HWJ9 (EMBL:AE004834) (212 aa) fasta scores: E(): 8.9e-50, 61.576% id in 203 a [...] |
| BP2599 protein network | https://string-db.org/network/257313.BP2599 | Similar to several putative e.g. regulators Rhizobium loti transcriptional regulator Mlr6174 TR:Q98A34 (EMBL:AP003008) (489 aa) fasta scores: E(): 2.2e-79, 52.218% id in 496 aa and Rhizobium meli [...] |
| BP2600 protein network | https://string-db.org/network/257313.BP2600 | Putative membrane protein; Similar to several including: Rhizobium loti Mlr8412 protein TR:Q983A8 (EMBL:AP003014) (405 aa) fasta scores: E(): 2.7e-60, 47.594% id in 374 aa and Rhizobium meliloti [...] |
| BP2601 protein network | https://string-db.org/network/257313.BP2601 | Similar to Bacillus stearothermophilus alcohol dehydrogenase SW:ADH3_BACST (P42328) (339 aa) fasta scores: E(): 2.9e-34, 37.615% id in 327 aa. |
| BP2602 protein network | https://string-db.org/network/257313.BP2602 | Hypothetical protein; Similar to Rhizobium loti Mll3668 hypothetical protein TR:Q98FQ2 (EMBL:AP003002) (436 aa) fasta scores: E(): 1.8e-10, 30.820% id in 451 aa. |
| BP2603 protein network | https://string-db.org/network/257313.BP2603 | Hypothetical protein; No significant database hits. |
| BP2604 protein network | https://string-db.org/network/257313.BP2604 | Putative LysR-family transcriptional regulatory protein; Similar to several proposed regulatory proteins Rhizobium loti glycine cleavage system transcription activator Mlr1973 TR:Q98JE9 (EMBL:AP0 [...] |
| BP2605 protein network | https://string-db.org/network/257313.BP2605 | Similar to several proposed regulatory proteins including: Pseudomonas aeruginosa probable transcriptional regulator Pa3782 TR:Q9HXL3 (EMBL:AE004797) (317 aa) fasta scores: E(): 2.8e-63, 53.968% [...] |
| BP2606 protein network | https://string-db.org/network/257313.BP2606 | Putative exported protein; Similar in parts to several e.g. Escherichia coli O157:H7 hypothetical 29.1 kDa protein Ecs0400 TR:BAB33823 (EMBL:AP002551) (262 aa) fasta scores: E(): 4.7e-49, 51.331% [...] |
| BP2607 protein network | https://string-db.org/network/257313.BP2607 | Similar to several membrane proteins including: Campylobacter jejuni putative integral membrane protein Cj0557C TR:Q9PHV8 (EMBL:AL139075) (361 aa) fasta scores: E(): 1.9e-09, 23.193% id in 332 aa [...] |
| BP2608 protein network | https://string-db.org/network/257313.BP2608 | Transposase for IS481 element. |
| BP2609 protein network | https://string-db.org/network/257313.BP2609 | Similar to Pseudomonas aeruginosa hypothetical protein Pa3614 pa3614 TR:Q9HY12 (EMBL:AE004781) (467 aa) fasta scores: E(): 2.7e-43, 40.870% id in 460 aa. |
| BP2610 protein network | https://string-db.org/network/257313.BP2610 | Putative solute transport protein; Similar to many proposed s including : Pseudomonas aeruginosa Pa1647 TR:Q9I378 (EMBL:AE004592) (573 aa) fasta scores: E(): 1.2e-71, 40.146% id in 548 aa and Myc [...] |
| BP2612 protein network | https://string-db.org/network/257313.BP2612 | Probable transcriptional regulator (pseudogene); Large insertion in pertussis, relative to parapertussis and bronchiseptica, downstream of this position. |
| BP2613 protein network | https://string-db.org/network/257313.BP2613 | Conserved hypothetical protein; Similar to several e.g. Rhizobium loti Mll1737 protein Mll1737 TR:Q98JX4 (EMBL:AP002998) (416 aa) fasta scores: E(): 3.9e-32, 29.496% id in 417 aa. |
| BP2614 protein network | https://string-db.org/network/257313.BP2614 | ABC transport protein, inner membrane component; Similar to many ABC transport proteins including: Streptomyces coelicolor putative ABC-transport protein, membrane component Sc8g12.20 TR:Q9KYY5 ( [...] |
| BP2615 protein network | https://string-db.org/network/257313.BP2615 | ABC transport protein, ATP-binding component; Similar to many ABC transport proteins including: Clostridium acetobutylicum ABC-type sulfate transporter, ATPase component cac0107 TR:Q97MT4 (EMBL:A [...] |
| BP2616 protein network | https://string-db.org/network/257313.BP2616 | Similar to many ABC transport proteins e.g. Escherichia coli taurine-binding periplasmic protein precursor taua or ssia or b0365 SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 4e-10, 25.081% [...] |
| BP2617 protein network | https://string-db.org/network/257313.BP2617 | Conserved hypothetical protein; Similar to many proteins of undefined function e.g. Deinococcus radiodurans conserved hypothetical protein Dr2540 TR:Q9RRF2 (EMBL:AE002083) (496 aa) fasta scores: [...] |
| BP2618 protein network | https://string-db.org/network/257313.BP2618 | Similar to many IclR-family transcriptional regulators including: Agrobacterium radiobacter putative transcriptional regulator TR:Q9F7C7 (EMBL:AF282677) (260 aa) fasta scores: E(): 3.8e-18, 34.56 [...] |
| BP2620 protein network | https://string-db.org/network/257313.BP2620 | Putative C4-dicarboxylate transporter (pseudogene); (G)2 in pertussis; (G)3 in parapertussis and bronchiseptica. |
| BP2621 protein network | https://string-db.org/network/257313.BP2621 | Similar to many proposed TetR-family transcriptional regulators including: Streptomyces coelicolor Sck13.32 TR:Q9AD73 (EMBL:AL512667) (200 aa) fasta scores: E(): 8.9e-17, 37.838% id in 185 aa, an [...] |
| hipA protein network | https://string-db.org/network/257313.BP2622 | HipA-like protein; Similar to Escherichia coli protein HipA or b1507 SWALL:HIPA_ECOLI (SWALL:P23874) (440 aa) fasta scores: E(): 2.8e-54, 41.92% id in 427 aa, and to Ralstonia solanacearum putati [...] |
| hipB protein network | https://string-db.org/network/257313.BP2623 | Similar to Escherichia coli protein HipB or b1508 SWALL:HIPB_ECOLI (SWALL:P23873) (88 aa) fasta scores: E(): 0.22, 27.38% id in 84 aa, and to Ralstonia solanacearum putative transcription regulat [...] |
| guaA protein network | https://string-db.org/network/257313.BP2624 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. |
| guaB protein network | https://string-db.org/network/257313.BP2625 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...] |
| BP2626 protein network | https://string-db.org/network/257313.BP2626 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa3765 pa3765 TR:Q9HXN0 (EMBL:AE004795) (194 aa) fasta scores: E [...] |
| BP2632 protein network | https://string-db.org/network/257313.BP2632 | Pseudogene. This CDS is the C-terminal region of BP1690 (disrupted by the insertion of IS481 element). |
| BP2633 protein network | https://string-db.org/network/257313.BP2633 | Possible exonuclease; Weakly similar to many hypothetical proteins and to several exonucleases including: Mycobacterium leprae hypothetical protein Ml1119 TR:Q9CC84 (EMBL:AL583920) (383 aa) fasta [...] |
| lrp-2 protein network | https://string-db.org/network/257313.BP2635 | D-amino acid dehydrogenase small subunit (pseudogene); (GC)4 in pertussis; (GC)5 in parapertussis and bronchiseptica. |
| BP2636 protein network | https://string-db.org/network/257313.BP2636 | Putative exported protein; Weakly similar to many proteins of unknown function including: Neisseria meningitidis hypothetical protein Nmb0465 TR:Q9K0U6 (EMBL:AE002403) (233 aa) fasta scores: E(): [...] |
| BP2637 protein network | https://string-db.org/network/257313.BP2637 | Putative lipoprotein; No significant database hits. |
| BP2638 protein network | https://string-db.org/network/257313.BP2638 | Putative exported protein; Highly similar to several Agrobacterium tumefaciens Agr_l_1912p agr_l_1912 TR:AAK89528 (EMBL:AE008295) (573 aa) fasta scores: E(): 9.6e-149, 63.73% id in 579 aa and to [...] |
| BP2639 protein network | https://string-db.org/network/257313.BP2639 | Putative integral membrane protein; Similar to Rhizobium loti hypothetical protein Msl0703 protein TR:Q98M71 (EMBL:AP002995) (97 aa) fasta scores: E(): 6.2e-10, 50% id in 78 aa. |
| BP2640 protein network | https://string-db.org/network/257313.BP2640 | Putative ABC transport protein, inner membrane component; Similar to many putative ABC transport proteins e.g. Rhizobium meliloti putative transport system permease ABC transporter protein Smc025 [...] |
| BP2642 protein network | https://string-db.org/network/257313.BP2642 | Putative ABC transport protein, inner membrane component (pseudogene); (C)3 in pertussis; (C)2 in parapertussis and bronchiseptica; Belongs to the ABC transporter superfamily. |
| glpR protein network | https://string-db.org/network/257313.BP2643 | Probable ATP-binding ABC transporter protein (pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| BP2644 protein network | https://string-db.org/network/257313.BP2644 | Similar to several Prokaryotic and Eukaryotic glycerol-3-phosphate dehydrogenases including: Deinococcus radiodurans glycerol-3-phosphate dehydrogenase Dr1019 TR:Q9RVK8 (EMBL:AE001953) (522 aa) f [...] |
| BP2645 protein network | https://string-db.org/network/257313.BP2645 | Similar to many IclR-family regulatory proteins including: Pectobacterium carotovorum subsp. carotovorum global regulatory protein, KdgR TR:Q9RB25 (EMBL:AF135395) (263 aa) fasta scores: E(): 2.6e [...] |
| BP2647 protein network | https://string-db.org/network/257313.BP2647 | Putative oxidoreductase (pseudogene); (C)2 in pertussis; (C)1 in parapertussis and bronchiseptica. |
| BP2648 protein network | https://string-db.org/network/257313.BP2648 | Conserved hypothetical protein; Similar to several including: Shewanella frigidimarina fumarate reductase flavoprotein subunit precursor SW:FRDA_SHEFR (Q02469) (596 aa) fasta scores: E(): 1.1e-21 [...] |
| BP2649 protein network | https://string-db.org/network/257313.BP2649 | Conserved hypothetical protein; Similar to several e.g. Mycobacterium tuberculosis CDC1551 conserved hypothetical protein mt3614 TR:AAK47972 (EMBL:AE007164) (278 aa) fasta scores: E(): 4e-17, 29. [...] |
| BP2651 protein network | https://string-db.org/network/257313.BP2651 | Conserved hypothetical protein (pseudogene); 11 bp deletion in pertussis relative to parapertussis and bronchiseptica. |
| BP2652 protein network | https://string-db.org/network/257313.BP2652 | Putative exported protein; No significant database hits. |
| BP2653 protein network | https://string-db.org/network/257313.BP2653 | Putative exported protein; Similar to many including: Burkholderia cepacia hypothetical 35.5 kDa protein TR:AAK81675 (EMBL:AF029344) (337 aa) fasta scores: E(): 3.1e-43, 42.63% id in 319 aa and R [...] |
| BP2654 protein network | https://string-db.org/network/257313.BP2654 | Similar to many e.g. Neisseria meningitidis dihydrodipicolinate synthase DapA or Nmb0929 SW:DAPA_NEIMB (Q9JZR4) (291 aa) fasta scores: E(): 3.8e-17, 27.57% id in 301 aa; Belongs to the DapA famil [...] |
| BP2655 protein network | https://string-db.org/network/257313.BP2655 | Similar to several putative IclR-family regulatory proteins e.g. Rhizobium loti transcription regulator Mll9009 TR:Q982L6 (EMBL:AP003015) (269 aa) fasta scores: E(): 3.2e-26, 37.55% id in 245 aa. |
| BP2656 protein network | https://string-db.org/network/257313.BP2656 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0540 pa0540 TR:Q9I5Z6 (EMBL:AE004490) (128 aa) fasta scores: E(): 2.6e-12, 43.3% id in 127 aa and Neisseria men [...] |
| BP2657 protein network | https://string-db.org/network/257313.BP2657 | Putative membrane protein; Similar to Pasteurella multocida hypothetical protein Pm1879 TR:Q9CJW2 (EMBL:AE006225) (205 aa) fasta scores: E(): 1.4e-20, 40.51% id in 195 aa and Escherichia coli hyp [...] |
| BP2658 protein network | https://string-db.org/network/257313.BP2658 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0868 pa0868 TR:Q9I573 (EMBL:AE004521) (137 aa) fasta scores: E(): 3.6e-25, 56.29% id in 135 aa. Also similar to a region in many peptide c [...] |
| queE protein network | https://string-db.org/network/257313.BP2659 | Conserved hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to th [...] |
| BP2660 protein network | https://string-db.org/network/257313.BP2660 | Similar to Neisseria meningitidis hypothetical protein Nma0704 nma0704 TR:Q9JVT6 (EMBL:AL162754) (140 aa) fasta scores: E(): 6.6e-14, 36.8% id in 144 aa. Also similar to several proposed tetrahyd [...] |
| BP2661 protein network | https://string-db.org/network/257313.BP2661 | Putative exported protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. |
| BP2662 protein network | https://string-db.org/network/257313.BP2662 | Similar to several aldolases e.g.Pseudomonas aeruginosa probable aldolase Pa0224 TR:Q9I6R4 (EMBL:AE004460) (260 aa) fasta scores: E(): 3.9e-55, 53.57% id in 252 aa and Haemophilus influenzae L-fu [...] |
| BP2663 protein network | https://string-db.org/network/257313.BP2663 | Weakly similar to several e.g. Rhizobium loti putative transcriptional regulator Mll2952 TR:Q98HA7 (EMBL:AP003000) (219 aa) fasta scores: E(): 1.4e-07, 28.2% id in 195 aa. |
| BP2664 protein network | https://string-db.org/network/257313.BP2664 | Similar to several MarR-family regulatory proteins e.g. Escherichia coli transcriptional regulator SlyA SW:SLYA_ECOLI (P55740) (146 aa) fasta scores: E(): 1.3e-07, 34.35% id in 131 aa and to Serr [...] |
| fhaS protein network | https://string-db.org/network/257313.BP2667 | Adhesin; Highly similar to Bordetella pertussis filamentous hemagglutinin FhaB or BP1879 SW:FHAB_BORPE (P12255) (3591 aa) fasta scores: E(): 6.4e-175, 48.23% id in 2606 aa, and to Bordetella bron [...] |
| purL protein network | https://string-db.org/network/257313.BP2668 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ri [...] |
| BP2669 protein network | https://string-db.org/network/257313.BP2669 | Putative integral membrane protein; Similar in parts to several e.g. Escherichia coli hypothetical protein YiaM B3577 SW:YIAM_ECOLI (P37674) (157 aa) fasta scores: E(): 3.5e-07, 34.05% id in 138 [...] |
| BP2670 protein network | https://string-db.org/network/257313.BP2670 | Putative membrane permease; Similar to many including: Rhizobium meliloti putative c4-dicarboxylate transport system, permease Smb21436 TR:CAC49665 (EMBL:AL603646) (426 aa) fasta scores: E(): 6.6 [...] |
| BP2671 protein network | https://string-db.org/network/257313.BP2671 | Putative exported protein; Similar to Rhizobium meliloti putative periplasmic binding protein Smc00271 TR:CAC46278 (EMBL:AL591788) (325 aa) fasta scores: E(): 1.2e-29, 34.74% id in 331 aa. |
| BP2672 protein network | https://string-db.org/network/257313.BP2672 | Transposase for IS481 element. |
| BP2673 protein network | https://string-db.org/network/257313.BP2673 | Transposase for IS1002 element. |
| fimX protein network | https://string-db.org/network/257313.BP2674 | Fimbrial protein; Bordetella pertussis is the causative agent of whooping cough. An essential step in the disease process is the attachment of the bacteria to the ciliated epithelium of the respi [...] |
| paaK protein network | https://string-db.org/network/257313.BP2675 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). |
| paaI protein network | https://string-db.org/network/257313.BP2676 | Similar to Escherichia coli phenylacetic acid degradation protein PaaI B1396 SW:PAAI_ECOLI (P76084) (140 aa) fasta scores: E(): 4.5e-25, 51.56% id in 128 aa. |
| paaG-2 protein network | https://string-db.org/network/257313.BP2677 | Similar to Escherichia coli probable enoyl-CoA hydratase PaaG B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 1.3e-55, 60.07% id in 258 aa. |
| BP2678 protein network | https://string-db.org/network/257313.BP2678 | Similar to Streptomyces coelicolor putative dehydrogenase Sch69.05 TR:Q9XA29 (EMBL:AL079308) (563 aa) fasta scores: E(): 4.9e-114, 56.81% id in 558 aa and to Azoarcus evansii PaaZ TR:Q9F9V2 (EMBL [...] |
| BP2679 protein network | https://string-db.org/network/257313.BP2679 | Transposase for IS481 element. |
| paaD protein network | https://string-db.org/network/257313.BP2681 | Probable phenylacetic acid degradation NADH oxidoreductase (pseudogene); HMMPfam hit to PF00175, Oxidoreductase NAD-binding domain. |
| paaC protein network | https://string-db.org/network/257313.BP2682 | Similar to Escherichia coli phenylacetic acid degradation protein PaaC or B1390 SW:PAAC_ECOLI (P76079) (248 aa) fasta scores: E(): 1.4e-49, 54.58% id in 251 aa. |
| paaB protein network | https://string-db.org/network/257313.BP2683 | Similar to Escherichia coli phenylacetic acid degradation protein PaaB or B1389 SW:PAAB_ECOLI (P76078) (95 aa) fasta scores: E(): 1.1e-23, 63.33% id in 90 aa. |
| paaA protein network | https://string-db.org/network/257313.BP2684 | Similar to Escherichia coli phenylacetic acid degradation protein PaaA or B1388 SW:PAAA_ECOLI (P76077) (309 aa) fasta scores: E(): 7.9e-93, 70.03% id in 307 aa. However more similar in length to [...] |
| paaX protein network | https://string-db.org/network/257313.BP2685 | Similar to Escherichia coli phenylacetic acid degradation operon negative regulatory protein paaX or B1399 SW:PAAX_ECOLI (P76086) (316 aa) fasta scores: E(): 1.3e-34, 35.94% id in 306 aa. |
| nnrE protein network | https://string-db.org/network/257313.BP2686 | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite fo [...] |
| orn protein network | https://string-db.org/network/257313.BP2687 | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. |
| BP2688 protein network | https://string-db.org/network/257313.BP2688 | Similar to many putative metalloproteases e.g. Campylobacter jejuni putative integral membrane zinc-metalloprotease Cj0723C TR:Q9PPI4 (EMBL:AL139076) (395 aa) fasta scores: E(): 1.4e-38, 33.07% i [...] |
| rsgA protein network | https://string-db.org/network/257313.BP2689 | Putative ATP/GTP-binding protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. Ma [...] |
| BP2691 protein network | https://string-db.org/network/257313.BP2691 | Probable ABC-transport protein, inner membrane component (pseudogene); Signal peptide predicted for BP2690 by SignalP 2.0 HMM (Signal peptide probabilty 0.988) with cleavage site probability 0.82 [...] |
| BP2692 protein network | https://string-db.org/network/257313.BP2692 | ABC-transport protein, solute-binding component; Similar to many membrane transport proteins including: Agrobacterium tumefaciens Agr_l_325p agr_l_325 TR:AAK88731 (EMBL:AE008214) (502 aa) fasta s [...] |
| BP2693 protein network | https://string-db.org/network/257313.BP2693 | Similar to many putative gamma-glutamyltranspeptidases e.g. Mycobacterium tuberculosis putative gamma-glutamyltranspeptidase Rv0773c TR:P71828 (EMBL:Z80226) (512 aa) fasta scores: E(): 1.5e-90, 5 [...] |
| BP2694 protein network | https://string-db.org/network/257313.BP2694 | Similar to many putative transcriptional regulators e.g. Pseudomonas aeruginosa probable transcriptional regulator Pa0816 TR:Q9I5C3 (EMBL:AE004516) (294 aa) fasta scores: E(): 1.8e-20, 33.88% id [...] |
| glnB protein network | https://string-db.org/network/257313.BP2699 | Similar to many nitrogen regulatory proteins e.g. Rhodobacter sphaeroides P-II SW:GLNB_RHOSH () (112 aa) fasta scores: E(): 8.4e-31, 76.78% id in 112 aa; Belongs to the P(II) protein family. |
| nadE protein network | https://string-db.org/network/257313.BP2700 | Putative NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. |
| BP2701 protein network | https://string-db.org/network/257313.BP2701 | Putative membrane transport protein; Similar to many proteins of undefined function e.g. Escherichia coli hypothetical protein YbdG SW:YBDG_ECOLI (P39455) (415 aa) fasta scores: E(): 3.3e-60, 42. [...] |
| argH-2 protein network | https://string-db.org/network/257313.BP2702 | Argininosuccinate lyase; Similar to many e.g. Pseudomonas aeruginosa argininosuccinate lyase ArgH or Pa5263 SW:ARLY_PSEAE (P50987) (464 aa) fasta scores: E(): 8.1e-115, 66.81% id in 449 aa. |
| BP2703 protein network | https://string-db.org/network/257313.BP2703 | Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa3208 TR:Q9HZ32 (EMBL:AE004744) (186 aa) fasta scores: E(): 9.6e-18, 38.83% id in 188 aa. |
| BP2704 protein network | https://string-db.org/network/257313.BP2704 | Transposase for IS481 element. |
| BP2705 protein network | https://string-db.org/network/257313.BP2705 | Putative molybdenum-binding protein; Similar to several including : Clostridium acetobutylicum molybdate-binding protein Cac0252 TR:Q97ME6 (EMBL:AE007538) (319 aa) fasta scores: E(): 1.6e-14, 34. [...] |
| moaA protein network | https://string-db.org/network/257313.BP2706 | Molybdenum cofactor biosynthesis protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. |
| moeA-2 protein network | https://string-db.org/network/257313.BP2707 | Molybdopterin cofactor biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. |
| moaB protein network | https://string-db.org/network/257313.BP2708 | Molybdenum cofactor biosynthesis protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. |
| moaE protein network | https://string-db.org/network/257313.BP2709 | Similar to Haemophilus influenzae molybdopterin converting factor, subunit 2 MoaE or Hi1673 SW:MOAE_HAEIN (P45308) (150 aa) fasta scores: E(): 1.9e-23, 44.37% id in 151 aa. |
| moaD protein network | https://string-db.org/network/257313.BP2710 | Similar to Escherichia coli molybdopterin converting factor, subunit 1 MoaD or Chla4 or ChlM or B0784 SW:MOAD_ECOLI (P30748) (81 aa) fasta scores: E(): 4.9e-05, 46.34% id in 82 aa. |
| moaC protein network | https://string-db.org/network/257313.BP2711 | Molybdenum cofactor biosynthesis protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family [...] |
| BP2712 protein network | https://string-db.org/network/257313.BP2712 | Putative exported protein; Similar over entire range to Pseudomonas aeruginosa hypothetical protein Pa4735 TR:Q9HV64 (EMBL:AE004887) (1088 aa) fasta scores: E(): 2.2e-37, 28.25% id in 1161 aa. |
| BP2713 protein network | https://string-db.org/network/257313.BP2713 | Putative hydrolase; Similar to Methylobacterium extorquens putative carboxymethylenebutenolidase SW:DLHH_METEX (P71505) (291 aa) fasta scores: E(): 4.8e-59, 56.8% id in 294 aa. Also similar to BP [...] |
| BP2714 protein network | https://string-db.org/network/257313.BP2714 | Putative lipoprotein. |
| BP2715 protein network | https://string-db.org/network/257313.BP2715 | AhpC/TSA-family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protectio [...] |
| BP2716 protein network | https://string-db.org/network/257313.BP2716 | Similar to many membrane transport proteins e.g. Pseudomonas aeruginosa probable MFS transporter Pa4887 TR:Q9HUS6 (EMBL:AE004901) (438 aa) fasta scores: E(): 1.2e-78, 54.5% id in 455 aa. |
| BP2717 protein network | https://string-db.org/network/257313.BP2717 | Putative exported protein; Similar to many proteins of undefined function e.g. Neisseria meningitidis hypothetical protein Nmb1028 TR:Q9JZJ2 (EMBL:AE002453) (291 aa) fasta scores: E(): 3.1e-51, 5 [...] |
| bioB protein network | https://string-db.org/network/257313.BP2718 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...] |
| BP2719 protein network | https://string-db.org/network/257313.BP2719 | Putative exported protein; No significant database hits. Similar to BP0266, BP1766, BP3099, BP3683, and BP3731. |
| BP2720 protein network | https://string-db.org/network/257313.BP2720 | Similar to many proposed regulators e.g. Rhizobium loti transcriptional regulator Mlr4666 TR:Q98DK2 (EMBL:AP003004) (195 aa) fasta scores: E(): 2.7e-15, 34.09% id in 176 aa. |
| BP2721 protein network | https://string-db.org/network/257313.BP2721 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP2722 protein network | https://string-db.org/network/257313.BP2722 | Similar to Pseudomonas putida Cadmium-Transporting ATPase CadA TR:AAK48831 (EMBL:AF333961) (737 aa) fasta scores: E(): 6.3e-147, 62% id in 737 aa and to Pseudomonas aeruginosa probable metal-tran [...] |
| BP2723 protein network | https://string-db.org/network/257313.BP2723 | Similar to Pseudomonas putida MerR-family response regulator CadR TR:AAK48830 (EMBL:AF333961) (147 aa) fasta scores: E(): 8e-24, 51.72% id in 145 aa, and to Haemophilus influenzae Zn ZntR or Hi16 [...] |
| BP2724 protein network | https://string-db.org/network/257313.BP2724 | Transposase for IS481 element. |
| BP2725 protein network | https://string-db.org/network/257313.BP2725 | Conserved hypothetical protein; Similar to Caulobacter crescentus formiminoglutamase Cc0958 TR:Q9A9M0 (EMBL:AE005772) (271 aa) fasta scores: E(): 8e-43, 45.72% id in 269 aa and to Pseudomonas aer [...] |
| BP2726 protein network | https://string-db.org/network/257313.BP2726 | Putative oxidoreductase; Similar to many inculding several proposed Prokaryotic and Eukaryotic acyl carrier proteins: Rhizobium loti 3-oxoacyl-acyl carrier protein reductase Mll1830 TR:Q98JQ5 (EM [...] |
| BP2727 protein network | https://string-db.org/network/257313.BP2727 | Similar to many SurF1-family proteins including: Caulobacter crescentus Cc1769 TR:Q9A7F4 (EMBL:AE005851) (225 aa) fasta scores: E(): 9.8e-41, 57.01% id in 228 aa and Rhizobium meliloti Smb21490 T [...] |
| BP2728 protein network | https://string-db.org/network/257313.BP2728 | Similar to Escherichia coli cytochrome O ubiquinol oxidase protein CyoD or B0429 or Z0532 or Ecs0483 SW:CYOD_ECOLI (P18403) (109 aa) fasta scores: E(): 1.7e-18, 54.71% id in 106 aa and to Rhizobi [...] |
| BP2729 protein network | https://string-db.org/network/257313.BP2729 | Similar to Escherichia coli cytochrome O ubiquinol oxidase subunit III CyoC or B0430 SW:CYOC_ECOLI (P18402) (204 aa) fasta scores: E(): 1.4e-45, 59.89% id in 187 aa and Rhizobium meliloti putativ [...] |
| BP2730 protein network | https://string-db.org/network/257313.BP2730 | Similar to Escherichia coli ubiquinol oxidase polypeptide I CyoB or B0431 or Z0534 or Ecs0485 SW:CYOB_ECOLI (P18401) (663 aa) fasta scores: E(): 1e-175, 65.74% id in 648 aa. Also similar to BP293 [...] |
| BP2732 protein network | https://string-db.org/network/257313.BP2732 | Putative ubiquinol oxidase subunit II (pseudogene); Signal peptide predicted for BP2731 by SignalP 2.0 HMM (Signal peptide probabilty 0.908) with cleavage site probability 0.462 between residues [...] |
| BP2733 protein network | https://string-db.org/network/257313.BP2733 | Transposase for IS481 element. |
| BP2734 protein network | https://string-db.org/network/257313.BP2734 | Putative chelatase (Pseudogene); Pseudogene. This CDS appears to have a frameshift mutation following codon 274. The frameshift occurs within a polymeric tract of (C)5. The sequence has been chec [...] |
| BP2735 protein network | https://string-db.org/network/257313.BP2735 | Conserved hypothetical protein; Similar to several e.g. Neisseria meningitidis hypothetical protein Nmb0404 TR:Q9K0Z7 (EMBL:AE002396) (106 aa) fasta scores: E(): 3.7e-09, 44.31% id in 88 aa. |
| BP2736 protein network | https://string-db.org/network/257313.BP2736 | Similar to many e.g. Escherichia coli nitrogen regulatory protein P-II 2 GlnK or B0450 or Z0562 or Ecs0504 SW:GLNK_ECOLI (P38504) (112 aa) fasta scores: E(): 1.4e-27, 69.64% id in 112 aa. Note th [...] |
| bapC protein network | https://string-db.org/network/257313.BP2738 | Probable ammonium transporter (Pseudogene); (C)7 in pertussis; CCACCC in parapertussis and bronchiseptica. |
| BP2741 protein network | https://string-db.org/network/257313.BP2741 | Similar to many putative transcriptional regulators e.g. Rhizobium loti transcriptional regulatory protein Mlr4117 TR:Q98ER4 (EMBL:AP003003) (205 aa) fasta scores: E(): 3.5e-42, 63.21% id in 193 [...] |
| BP2742 protein network | https://string-db.org/network/257313.BP2742 | Similar to many putative membrane transport proteins e.g. Rhizobium loti transmembrane transport protein Mll4118 TR:Q98ER5 (EMBL:AP003003) (446 aa) fasta scores: E(): 4.8e-105, 66.9% id in 414 aa [...] |
| BP2743 protein network | https://string-db.org/network/257313.BP2743 | Putative ABC transport protein, ATP-binding component; Similar to many putative membrane transport proteins e.g. Thermotoga maritima branched chain amino acid ABC transporter, ATP-binding protein [...] |
| BP2744 protein network | https://string-db.org/network/257313.BP2744 | Putative ABC transport protein, ATP-binding component; Similar to many putative membrane transport proteins e.g. Deinococcus radiodurans branched-chain amino acid ABC transporter, ATP-binding pro [...] |
| BP2745 protein network | https://string-db.org/network/257313.BP2745 | Putative ABC transport protein, ATP-binding component; Similar to many putative membrane transport proteins e.g. Deinococcus radiodurans branched-chain amino acid ABC transporter, permease protei [...] |
| BP2746 protein network | https://string-db.org/network/257313.BP2746 | Putative ABC transport protein, inner membrane component; Similar to many putative membrane transport proteins including: Rhizobium meliloti probable high-affinity branched-chain amino acid trans [...] |
| BP2747 protein network | https://string-db.org/network/257313.BP2747 | Similar to many putative membrane transport solute-binding proteins including: Rhizobium meliloti putative leucine-specific binding protein precursor TR:CAC47059 (EMBL:AL591790) (372 aa) fasta sc [...] |
| BP2748 protein network | https://string-db.org/network/257313.BP2748 | Transposase for IS481 element. |
| putA protein network | https://string-db.org/network/257313.BP2749 | Bifunctional proline oxidoreductase/transcriptional repressor; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogen [...] |
| BP2750 protein network | https://string-db.org/network/257313.BP2750 | Lipoprotein; No significant database hits. |
| BP2751 protein network | https://string-db.org/network/257313.BP2751 | Putative membrane protein; Similar to many including: Neisseria meningitidis (serogroup A) hypothetical integral membrane protein Nma1929 or Nmb1671 TR:Q9JRE7 (EMBL:AL162757) (553 aa) fasta score [...] |
| BP2752 protein network | https://string-db.org/network/257313.BP2752 | Putative exported protein; Similar to Escherichia coli paraquat-inducible protein a pqia or pqi5a or b0950 SW:PQIA_ECOLI (P43670) (417 aa) fasta scores: E(): 8.1e-35, 36.09% id in 374 aa. |
| clpA protein network | https://string-db.org/network/257313.BP2753 | Similar to Escherichia coli ATP-dependent Clp protease ATP-binding subunit ClpA or LopD or B0882 or Z1119 or Ecs0968 SW:CLPA_ECOLI (P15716) (758 aa) fasta scores: E(): 8.5e-171, 61.73% id in 763 [...] |
| pbp protein network | https://string-db.org/network/257313.BP2754 | Similar to Escherichia coli penicillin-binding protein 1c PbpC or B2519 SW:PBPC_ECOLI (P76577) (770 aa) fasta scores: E(): 1.3e-106, 46.04% id in 771 aa. |
| BP2755 protein network | https://string-db.org/network/257313.BP2755 | Putative exported protein; Similar to Xylella fastidiosa hypothetical protein Xf1252 TR:Q9PDX7 (EMBL:AE003959) (1641 aa) fasta scores: E(): 9.2e-134, 37.23% id in 1708 aa. |
| clpS protein network | https://string-db.org/network/257313.BP2756 | Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. |
| BP2757 protein network | https://string-db.org/network/257313.BP2757 | Putative cold-shock protein; Similar to Salmonella typhimurium cold shock protein CspA SW:CSPA_SALTY (P37410) (69 aa) fasta scores: E(): 8.7e-15, 66.66% id in 66 aa. Also similar to many cold sho [...] |
| BP2758 protein network | https://string-db.org/network/257313.BP2758 | Exported protein; Similar in parts to several including: Plasmid pSB102 hypothetical 17.7 kDa protein TR:CAC79159 (EMBL:AJ304453) (160 aa) fasta scores: E(): 4.9e-15, 36.91% id in 149 aa and Trep [...] |
| BP2759 protein network | https://string-db.org/network/257313.BP2759 | Putative thiolase; Similar to Acinetobacter calcoaceticus beta-ketoadipyl CoA thiolase PcaF SW:PCAF_ACICA (Q43974) (401 aa) fasta scores: E(): 7.9e-100, 68.67% id in 399 aa; Belongs to the thiola [...] |
| BP2760 protein network | https://string-db.org/network/257313.BP2760 | Similar to several chloride-channel proteins including: Burkholderia cepacia chloride-channel protein TR:AAK81672 (EMBL:AF029344) (443 aa) fasta scores: E(): 2.8e-45, 40.82% id in 414 aa and to E [...] |
| sodB protein network | https://string-db.org/network/257313.BP2761 | Superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase [...] |
| xseA protein network | https://string-db.org/network/257313.BP2762 | Exodeoxyribonuclease large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleoti [...] |
| BP2763 protein network | https://string-db.org/network/257313.BP2763 | Transposase for IS481 element. |
| BP2764 protein network | https://string-db.org/network/257313.BP2764 | Similar to several e.g. Synechocystis sp putative biopolymer transport ExbB-like protein 3 sll1404 SW:EXB3_SYNY3 (P72604) (210 aa) fasta scores: E(): 2.4e-09, 29.89% id in 184 aa. |
| BP2765 protein network | https://string-db.org/network/257313.BP2765 | Similar to many including Vibrio cholerae biopolymer transport protein Exbd2 or Vc1545 SW:EXD2_VIBCH (Q9ZHV9) (134 aa) fasta scores: E(): 5.3e-06, 30.3% id in 132 aa and to Bordetella pertussis E [...] |
| lpxK protein network | https://string-db.org/network/257313.BP2766 | Putative tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide [...] |
| BP2767 protein network | https://string-db.org/network/257313.BP2767 | Conserved hypothetical protein; Similar to Escherichia coli, and protein YcaR or B0917 or Z1263 or Ecs1000 SW:YCAR_ECOLI (P75844) (60 aa) fasta scores: E(): 2.6e-11, 53.57% id in 56 aa; Belongs t [...] |
| kdsB protein network | https://string-db.org/network/257313.BP2768 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. |
| adK protein network | https://string-db.org/network/257313.BP2769 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...] |
| BP2770 protein network | https://string-db.org/network/257313.BP2770 | Probable short-chain dehydrogenase; Similar to many Prokaryotic and Eukaryotic dehydrogenases e.g. Pseudomonas aeruginosa probable short-chain dehydrogenase Pa2554 TR:Q9I0T0 (EMBL:AE004683) (255 [...] |
| murJ protein network | https://string-db.org/network/257313.BP2771 | Conserved integral membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. |
| BP2772 protein network | https://string-db.org/network/257313.BP2772 | Putative membrane protein; Weakly similar to many proposed trancriptional regulators e.g. Escherichia coli protein FecR or B4292 SW:FECR_ECOLI (P23485) (317 aa) fasta scores: E(): 4.4e-17, 30.38% [...] |
| rpst protein network | https://string-db.org/network/257313.BP2773 | 30s ribosomal protein s20; Binds directly to 16S ribosomal RNA. |
| BP2774 protein network | https://string-db.org/network/257313.BP2774 | Putative aldolase; Similar to Escherichia coli 2-dehydro-3-deoxyglucarate aldolase GarL or B3126 SW:GARL_ECOLI (P23522) (256 aa) fasta scores: E(): 6.7e-56, 59.12% id in 252 aa, and to Escherichi [...] |
| BP2780 protein network | https://string-db.org/network/257313.BP2780 | Putative dihydroxy-acid dehydratase (pseudogene); (GGCC)2 in pertussis; (GGCC)3 in parapertussis and bronchiseptica; Belongs to the LDH2/MDH2 oxidoreductase family. |
| BP2781 protein network | https://string-db.org/network/257313.BP2781 | Transposase for IS481 element. |
| BP2782 protein network | https://string-db.org/network/257313.BP2782 | Lipoprotein; Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical 8.0 kDa protein Pa3031 TR:O68801 (EMBL:AF053982) (73 aa) fasta scores: E(): 4.7e-10, 51.51% id [...] |
| thrC protein network | https://string-db.org/network/257313.BP2783 | Threonine synthase; Similar to Corynebacterium glutamicum threonine synthase ThrC SW:THRC_CORGL (P23669) (481 aa) fasta scores: E(): 5.5e-97, 56.56% id in 472 aa. |
| BP2784 protein network | https://string-db.org/network/257313.BP2784 | Similar to Pseudomonas aeruginosa homoserine dehydrogenase Hom or Pa3736 SW:DHOM_PSEAE (P29365) (434 aa) fasta scores: E(): 2.9e-97, 63.76% id in 436 aa. |
| BP2785 protein network | https://string-db.org/network/257313.BP2785 | Putative aminotransferase; Similar to Escherichia coli hypothetical aminotransferase YfdZ or B2379 SW:YFDZ_ECOLI (P77434) (412 aa) fasta scores: E(): 4.8e-129, 79.64% id in 393 aa. |
| BP2786 protein network | https://string-db.org/network/257313.BP2786 | Conserved hypothetical protein; Similar in parts to Methylobacillus flagellatum membrane protein TR:Q9RAN1 (EMBL:L78665) (122 aa) fasta scores: E(): 3e-05, 35.17% id in 145 aa. |
| BP2787 protein network | https://string-db.org/network/257313.BP2787 | Hypothetical protein; Similar to many bacterioferritin comigratory proteins the function of which are unclear e.g. Pseudomonas aeruginosa Bcp or Pa1008 TR:Q9I4W5 (EMBL:AE004533) (157 aa) fasta sc [...] |
| BP2788 protein network | https://string-db.org/network/257313.BP2788 | Hypothetical protein; The C-terminus of the product of this CDS is similar to many hypothetical proteins e.g. Vibrio cholerae hypothetical protein Vc2507 vc2507 TR:Q9KP69 (EMBL:AE004321) (458 aa) [...] |
| BP2789 protein network | https://string-db.org/network/257313.BP2789 | Conserved hypothetical protein; Weakly similar to a number of pyridoxal phosphate biosynthetic proteins e.g. Escherichia coli PdxA or B0052 SW:PDXA_ECOLI (P19624) (329 aa) fasta scores: E(): 9.4e [...] |
| BP2790 protein network | https://string-db.org/network/257313.BP2790 | Putative exported protein; Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa2026 SW:YK26_PSEAE (P39879) (333 aa) fasta scores: E(): 8.2e-82, 65 [...] |
| dnaB protein network | https://string-db.org/network/257313.BP2791 | DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, a [...] |
| BP2792 protein network | https://string-db.org/network/257313.BP2792 | Hypothetical protein; No significant database hits. |
| rplI protein network | https://string-db.org/network/257313.BP2793 | 50s ribosomal protein l9; Binds to the 23S rRNA. |
| rpsR protein network | https://string-db.org/network/257313.BP2794 | 30s ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...] |
| priB protein network | https://string-db.org/network/257313.BP2795 | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. |
| rpsF protein network | https://string-db.org/network/257313.BP2796 | 30s ribosomal protein s6; Binds together with S18 to 16S ribosomal RNA. |
| folE2 protein network | https://string-db.org/network/257313.BP2797 | Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. |
| dxs protein network | https://string-db.org/network/257313.BP2798 | 1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...] |
| BP2799 protein network | https://string-db.org/network/257313.BP2799 | Similar to Bradyrhizobium japonicum probable geranyltranstransferase SW:ISPA_BRAJA (Q45220) (332 aa) fasta scores: E(): 2.2e-42, 49.65% id in 288 aa; Belongs to the FPP/GGPP synthase family. |
| xseB protein network | https://string-db.org/network/257313.BP2800 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...] |
| BP2801 protein network | https://string-db.org/network/257313.BP2801 | Similar in the C-terminus to many putative transcriptional regulators e.g. Rhizobium meliloti putative transcriptional regulator IclR family protein Smb20586 TR:CAC49898 (EMBL:AL603647) (251 aa) [...] |
| BP2802 protein network | https://string-db.org/network/257313.BP2802 | Putative exported protein; Similar to several proteins of undefined function e.g. Bordetella pertussis hypothetical 34.9 kDa protein SW:YBR5_BORPE (O30446) (323 aa) fasta scores: E(): 8.8e-37, 34 [...] |
| BP2803 protein network | https://string-db.org/network/257313.BP2803 | Putative integral membrane protein; No significant database hits. |
| BP2804 protein network | https://string-db.org/network/257313.BP2804 | Putative iron-sulfur protein; Similar to Bordetella bronchiseptica AlcE, involved in the iron siderophore alcaligin biosynthesis, SWALL:O52833 (EMBL:AJ000061) (397 aa) fasta scores: E(): 3.3e-120 [...] |
| BP2806 protein network | https://string-db.org/network/257313.BP2806 | Transposase (Pseudogene); Acts as a magnesium transporter. |
| BP2807 protein network | https://string-db.org/network/257313.BP2807 | Similar to several putative thioesterases e.g. Escherichia coli putative acyl-CoA thioester hydrolase precursor YciA SW:YCIA_ECOLI (P04379) (132 aa) fasta scores: E(): 1.3e-15, 43.65% id in 126 a [...] |
| BP2808 protein network | https://string-db.org/network/257313.BP2808 | Putative integral membrane protein; Similar to severale.g. Pseudomonas aeruginosa hypothetical protein Pa5383 TR:Q9HTI1 (EMBL:AE004951) (355 aa) fasta scores: E(): 1.5e-45, 42.45% id in 351 aa. |
| BP2809 protein network | https://string-db.org/network/257313.BP2809 | Similar to many transcriptional regulators e.g. Chromatium vinosum rubisco operon transcriptional regulator RbcR SW:RBCR_CHRVI (P25544) (302 aa) fasta scores: E(): 1e-21, 36.96% id in 257 aa; Bel [...] |
| BP2810 protein network | https://string-db.org/network/257313.BP2810 | Putative hydrolase; Similar to many e.g. Pseudomonas aeruginosa probable hydrolase Pa2922 TR:Q9HZS5 (EMBL:AE004718) (389 aa) fasta scores: E(): 3.3e-76, 49.87% id in 395 aa and to Arabidopsis tha [...] |
| fadD protein network | https://string-db.org/network/257313.BP2811 | Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 4e-115, 54.93% id in 557 aa. |
| BP2812 protein network | https://string-db.org/network/257313.BP2812 | Transposase for IS481 element. |
| BP2813 protein network | https://string-db.org/network/257313.BP2813 | Inositol monophosphatase-family protein; Similar in the C-terminus to many extragenic suppressor proteins e.g. Escherichia coli extragenic suppressor protein SuhB or SsyA or B2533 SW:SUHB_ECOLI ( [...] |
| BP2815 protein network | https://string-db.org/network/257313.BP2815 | Conserved hypothetical protein (pseudogene); 16 bp deletion in pertussis relative to parapertussis and bronchiseptica; Belongs to the glycosyl hydrolase 31 family. |
| metN protein network | https://string-db.org/network/257313.BP2816 | ABC transport protein, ATP-binding component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. |
| BP2817 protein network | https://string-db.org/network/257313.BP2817 | ABC transport protein, inner membrane component; Similar to many ABC transport proteins e.g. Rhizobium loti ABC transporter, permease protein Mll4791 TR:Q98DA3 (EMBL:AP003005) (218 aa) fasta scor [...] |
| BP2818 protein network | https://string-db.org/network/257313.BP2818 | Putative exported protein; Similar to Rhizobium meliloti putative outer membrane lipoprotein Smc03157 TR:CAC47467 (EMBL:AL591792) (258 aa) fasta scores: E(): 3.2e-54, 58.39% id in 262 aa; Belongs [...] |
| BP2819 protein network | https://string-db.org/network/257313.BP2819 | Transposase for IS481 element. |
| BP2820 protein network | https://string-db.org/network/257313.BP2820 | Putative alcohol dehydrogenase; Similar to several including: Pseudomonas putida alcohol dehydrogenase AdhA TR:O68647 (EMBL:AF052750) (382 aa) fasta scores: E(): 2e-38, 39.06% id in 384 aa and to [...] |
| BP2823 protein network | https://string-db.org/network/257313.BP2823 | Conserved hypothetical protein; HMMPfam hit to PF02619, Uncharacterized ACR, YneC family COG1359. |
| BP2824 protein network | https://string-db.org/network/257313.BP2824 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Methanothermobacter thermautotrophicus conserved protein Mth1421 TR:O27472 (EMBL:AE000904) (399 aa) fasta sc [...] |
| BP2825 protein network | https://string-db.org/network/257313.BP2825 | Putative GntR-family transcriptional regulatory protein; Similar to Rhizobium meliloti putative GntR-family transcription factor Sma1442 TR:AAK65446 (EMBL:AE007265) (254 aa) fasta scores: E(): 2. [...] |
| BP2826 protein network | https://string-db.org/network/257313.BP2826 | Putative exported protein; Similar to several e.g. Rhizobium meliloti conserved hypothetical protein sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.5e-40, 37.22% id in 317 aa. |
| BP2827 protein network | https://string-db.org/network/257313.BP2827 | Hypothetical protein; No significant database hits. |
| BP2830 protein network | https://string-db.org/network/257313.BP2830 | Conserved hypothetical protein (pseudogene); Pseudogene. This CDS contains an in-frame TAG stop codon. Weakly similar to various hypothetical proteins. |
| BP2831 protein network | https://string-db.org/network/257313.BP2831 | ABC transport protein, inner membrane component; Similar to many putative membrane transport proteins e.g. Rhizobium meliloti putative sugar uptake ABC transporter permease protein Smb21458 TR:CA [...] |
| BP2832 protein network | https://string-db.org/network/257313.BP2832 | ABC transport protein, ATP-binding component; Similar to many putative membrane transport proteins e.g. Rhizobium loti sugar binding protein of ABC transporter mll1716 TR:Q98JZ1 (EMBL:AP002998) ( [...] |
| BP2835 protein network | https://string-db.org/network/257313.BP2835 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP2836 protein network | https://string-db.org/network/257313.BP2836 | Putative DNA-binding protein; Weakly similar to Rhizobium loti transcription regulator Mll9009 TR:Q982L6 (EMBL:AP003015) (269 aa) fasta scores: E(): 6.5e-05, 24.41% id in 213 aa. |
| BP2837 protein network | https://string-db.org/network/257313.BP2837 | Putative MerR-family transcriptional regulator; Similar to Pseudomonas aeruginosa redox-sensitive transcriptional activator SoxR or Pa2273 SW:SOXR_PSEAE (Q51506) (156 aa) fasta scores: E(): 1.6e- [...] |
| BP2838 protein network | https://string-db.org/network/257313.BP2838 | Similar to many DNA hydrolases responsble for DNA damage repair e.g. Escherichia coli DNA-3-methyladenine glycosylase I Tag or B3549 SW:3MG1_ECOLI (P05100) (187 aa) fasta scores: E(): 6.5e-31, 48 [...] |
| BP2839 protein network | https://string-db.org/network/257313.BP2839 | Exported protein, conserved; Highly similar to several proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa4879 pa4879 TR:Q9HUT4 (EMBL:AE004901) (689 aa) fasta score [...] |
| BP2840 protein network | https://string-db.org/network/257313.BP2840 | Similar to many proposed regulators e.g. Rhizobium loti probable transcriptional regulator Mlr0535 TR:Q98ML2 (EMBL:AP002995) (204 aa) fasta scores: E(): 6e-33, 51.92% id in 208 aa. |
| BP2841 protein network | https://string-db.org/network/257313.BP2841 | Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa0182 TR:Q9I6V0 (EMBL:AE004456) (250 aa) fasta scores: E(): 1.5e-43, 55.2% id in 250 aa and to Bacillus subtilis 3-oxoacyl-[a [...] |
| BP2849 protein network | https://string-db.org/network/257313.BP2849 | Similar to several transcriptional regulators e.g. Escherichia coli hca operon transcriptional activator HcaR or PhdR or B2537 SW:HCAR_ECOLI (Q47141) (296 aa) fasta scores: E(): 9.7e-08, 27.3% id [...] |
| panB protein network | https://string-db.org/network/257313.BP2850 | Probable 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisoval [...] |
| BP2851 protein network | https://string-db.org/network/257313.BP2851 | Highly similar to the Bordetella pertussis outer membrane porin protein precursor (BP0840) SW:OMP_BORPE (Q04064) (385 aa) fasta scores: E(): 6.4e-58, 53.72% id in 389 aa. Also similar to BP0267 ( [...] |
| BP2852 protein network | https://string-db.org/network/257313.BP2852 | Transposase for IS481 element. |
| BP2853 protein network | https://string-db.org/network/257313.BP2853 | Probable short chain dehydrogenase; Similar to several e.g. Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase SW:2BHD_STREX (P19992) (255 aa) fasta scores: E(): 1e-26, 41.4% id in 256 [...] |
| BP2854 protein network | https://string-db.org/network/257313.BP2854 | Probable short chain dehydrogenase; Similar to Bacillus subtilis glucose 1-dehydrogenase ii ycdF SW:DHG2_BACSU (P80869) (258 aa) fasta scores: E(): 1.7e-26, 38.34% id in 253 aa. |
| BP2855 protein network | https://string-db.org/network/257313.BP2855 | Similar to many membrane transport proteins e.g. Escherichia coli alpha-ketoglutarate permease KgtP or WitA or B2587 SW:KGTP_ECOLI (P17448) (432 aa) fasta scores: E(): 1.3e-45, 34.81% id in 428 a [...] |
| BP2856 protein network | https://string-db.org/network/257313.BP2856 | Conserved hypothetical protein; Similar to several proteins of unknown function e.g. Escherichia coli hypothetical 31.7 kDa protein SW:YPT2_ECOLI (Q99390) (286 aa) fasta scores: E(): 8.1e-15, 27. [...] |
| BP2857 protein network | https://string-db.org/network/257313.BP2857 | Putative LysR-family transcriptional regulator; Similar to several including: Caulobacter crescentus isoleucine biosynthesis transcriptional activator Ilvr or Cc3045 SW:ILVR_CAUCR (P52670) (296 a [...] |
| tyrB-2 protein network | https://string-db.org/network/257313.BP2858 | Similar to Escherichia coli aromatic-amino-acid aminotransferase TyrB or B4054 SW:TYRB_ECOLI (P04693) (397 aa) fasta scores: E(): 2.7e-89, 59.44% id in 397 aa. Also similar to BP1795, 49.622% ide [...] |
| BP2859 protein network | https://string-db.org/network/257313.BP2859 | Conserved hypothetical protein; Similar to many proteins of unknown function e.g. Escherichia coli O157:H7 hypothetical 25.8 kDa protein Ecs2700 TR:BAB36123 (EMBL:AP002559) (231 aa) fasta scores: [...] |
| BP2860 protein network | https://string-db.org/network/257313.BP2860 | Probable cation-transporting ATPase; Highly similar to Rhizobium meliloti copper-transporting ATPase ActP SW:ATCU_RHIME (Q9X5X3) (827 aa) fasta scores: E(): 1.5e-179, 66.58% id in 802 aa, and to [...] |
| BP2861 protein network | https://string-db.org/network/257313.BP2861 | Transposase for IS481 element. |
| BP2862 protein network | https://string-db.org/network/257313.BP2862 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Rhizobium loti Mll7047 protein TR:Q987H8 (EMBL:AP003010) (126 aa) fasta scores: E(): 1.1e-09, 37.06% id in 1 [...] |
| BP2863 protein network | https://string-db.org/network/257313.BP2863 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Rhizobium loti Mlr0372 protein TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 8.7e-07, 26.91% id in 3 [...] |
| BP2864 protein network | https://string-db.org/network/257313.BP2864 | Similar to many putative alcohol dehydrogenases e.g. Halobacterium sp alcohol dehydrogenase Adh4 or Vng1821G TR:Q9HP38 (EMBL:AE005083) (347 aa) fasta scores: E(): 1.7e-29, 42.33% id in 352 aa. |
| BP2865 protein network | https://string-db.org/network/257313.BP2865 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Sphingomonas aromaticivorans hypothetical 14.5 kDa protein TR:O85848 (EMBL:AF079317) (137 aa) fasta scores: [...] |
| BP2867 protein network | https://string-db.org/network/257313.BP2867 | Putative exported protein (pseudogene); (G)4 in pertussis, (G)3 in parapertussis and bronchiseptica. |
| BP2868 protein network | https://string-db.org/network/257313.BP2868 | Putative ABC transport proteins, inner membrane component; Similar to many membrane transport proteins e.g. Rhizobium loti ABC transporter, permease protein mlr6798 TR:Q988C6 (EMBL:AP003010) (275 [...] |
| BP2869 protein network | https://string-db.org/network/257313.BP2869 | Conserved hypothetical protein; The very N-terminus of the predicted product of this CDS is similar to Rhizobium loti Msr6094 protein TR:Q98A99 (EMBL:AP003008) (79 aa) fasta scores: E(): 9.3e-05, [...] |
| BP2870 protein network | https://string-db.org/network/257313.BP2870 | Similar to many putative acid CoA ligases e.g. Rhizobium loti Mlr1843 TR:Q98JP7 (EMBL:AP002998) (495 aa) fasta scores: E(): 4.9e-39, 33.12% id in 486 aa. |
| BP2871 protein network | https://string-db.org/network/257313.BP2871 | Hypothetical protein; No significant database hits. Similar to BP3011, 45.562% identity (47.531% ungapped) in 169 aa overlap. |
| BP2872 protein network | https://string-db.org/network/257313.BP2872 | Similar to many proposed transcriptional regulators e.g. Rhizobium meliloti putative transcription regulator protein Smc00131 TR:CAC46458 (EMBL:AL591788) (162 aa) fasta scores: E(): 7.2e-38, 63.5 [...] |
| BP2873 protein network | https://string-db.org/network/257313.BP2873 | Putative exported protein; Similar to many proteins of undefined function e.g. Rhizobium meliloti hypothetical protein Sma1927 sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e [...] |
| ribE protein network | https://string-db.org/network/257313.BP2874 | Highly similar to Escherichia coli riboflavin synthase alpha chain RibE or RibC or b1662 SW:RISA_ECOLI (P29015) (213 aa) fasta scores: E(): 1.8e-24, 43.51% id in 216 aa. |
| BP2875 protein network | https://string-db.org/network/257313.BP2875 | Amidase; Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 5.2e-18, 27.98% id in 461 aa and to Rhizobium loti glu-trna amidotransferase, subunit a mlr6081 T [...] |
| BP2878 protein network | https://string-db.org/network/257313.BP2878 | Transposase (Pseudogene); Signal peptide predicted for BP2877 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.632 between residues 23 and 24; Belongs to the [...] |
| BP2879 protein network | https://string-db.org/network/257313.BP2879 | Similar to many membrane transport proteins e.g. Escherichia coli cyanate transport protein CynX or b0341 SW:CYNX_ECOLI (P17583) (384 aa) fasta scores: E(): 1.9e-46, 41.36% id in 382 aa. |
| BP2880 protein network | https://string-db.org/network/257313.BP2880 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Pseudomonas aeruginosa probable deaminase Pa2499 TR:Q9I0Y3 (EMBL:AE004677) (151 aa) fasta scores: E(): 8e-31 [...] |
| BP2881 protein network | https://string-db.org/network/257313.BP2881 | Conserved hypothetical protein; Similar to many proteins carrying the mainly Eukaryotic Ankyrin repeat motif e.g. Pseudomonas aeruginosa hypothetical protein Pa2498 pa2498 TR:Q9I0Y4 (EMBL:AE00467 [...] |
| BP2882 protein network | https://string-db.org/network/257313.BP2882 | Similar to many proposed transcriptional regulators including: Streptomyces coelicolor Sc4b5.05C TR:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 1.5e-24, 38.43% id in 281 aa and to Pseudomo [...] |
| BP2885 protein network | https://string-db.org/network/257313.BP2885 | Putative exported protein; Similar to many proteins of undefined function e.g. Pseudomonas aeruginosa hypothetical protein Pa2651 TR:Q9I0I7 (EMBL:AE004694) (352 aa) fasta scores: E(): 1.2e-93, 76 [...] |
| BP2886 protein network | https://string-db.org/network/257313.BP2886 | Putative lipoprotein. |
| BP2887 protein network | https://string-db.org/network/257313.BP2887 | Hypothetical protein; No significant database hits. |
| BP2888 protein network | https://string-db.org/network/257313.BP2888 | Putative integral membrane protein; Similar to Chromatium vinosum hydrogenase cytochrome B-type subunit homolog TR:Q46471 (EMBL:U25811) (231 aa) fasta scores: E(): 4.2e-30, 45.07% id in 213 aa. |
| BP2889 protein network | https://string-db.org/network/257313.BP2889 | Putative c'cytochrome; Similar to Alcaligenes xylosoxydans xylosoxydans cytochrome c' SW:CYCP_ALCXX (P00138) (127 aa) fasta scores: E(): 1.2e-39, 81.89% id in 127 aa and to Neisseria meningitidis [...] |
| purB protein network | https://string-db.org/network/257313.BP2890 | Similar to Escherichia coli adenylosuccinate lyase PurB or b1131 SW:PUR8_ECOLI (P25739) (456 aa) fasta scores: E(): 1.7e-108, 61.77% id in 450 aa, and to Haemophilus influenzae adenylosuccinate l [...] |
| BP2891 protein network | https://string-db.org/network/257313.BP2891 | Conserved hypothetical protein; Similar to serveral including: Escherichia coli hypothetical Gst-like protein YibF or b3592 SW:YIBF_ECOLI (P32105) (202 aa) fasta scores: E(): 1.5e-26, 40.88% id i [...] |
| BP2892 protein network | https://string-db.org/network/257313.BP2892 | Putative integral membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0340 pa0340 TR:Q9I6F3 (EMBL:AE004472) (267 aa) fasta scores: E(): 3e-32, 41.4% id in 256 aa, and to Ne [...] |
| trmU protein network | https://string-db.org/network/257313.BP2893 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. |
| BP2894 protein network | https://string-db.org/network/257313.BP2894 | Similar to several including: Pseudomonas aeruginosa probable transcriptional regulator Pa0448 TR:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 1.3e-48, 43.05% id in 295 aa and to Escherichi [...] |
| BP2895 protein network | https://string-db.org/network/257313.BP2895 | Putative exported protein; Similar to many including: Rhizobium meliloti hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-51, 45.79% id in 321 aa and to S [...] |
| BP2896 protein network | https://string-db.org/network/257313.BP2896 | Similar to many proposed hydrolases including: Rhizobium loti N-formylglutamate amidohydrolase Mll3040 TR:Q98H42 (EMBL:AP003001) (313 aa) fasta scores: E(): 4.9e-33, 40.6% id in 266 aa, and to Rh [...] |
| pntaA protein network | https://string-db.org/network/257313.BP2897 | Similar to Rhodospirillum rubrum NAD(P) transhydrogenase, alpha subunit part 1 PntaA or NntA1 SWALL:Q60164 (EMBL:U05294) (384 aa) fasta scores: E(): 8.2e-59, 51.32% id in 378 aa, and to Ralstonia [...] |
| pntB protein network | https://string-db.org/network/257313.BP2900 | NAD(P) transhydrogenase subunit beta (pseudogene); G in pertussis; (AC)G in parapertussis and bronchiseptica. |
| bfeA protein network | https://string-db.org/network/257313.BP2901 | Ferric enterobactin receptor; Previously sequenced as Bordetella pertussis ferric enterobactin receptor BfeA TR:Q45341 (EMBL:U13950) (735 aa) fasta scores: E(): 0, 99.72% id in 737 aa. |
| BP2902 protein network | https://string-db.org/network/257313.BP2902 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa2689 SWALL:Q9I0F2 (EMBL:AE004697) (304 aa) fasta scores: E(): 2.4e-25, 39.79% id in 289 aa, and to Escherichia [...] |
| glcF protein network | https://string-db.org/network/257313.BP2903 | Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SW:GLCF_ECOLI (P52074) (407 aa) fasta scores: E(): 3.4e-77, 52.69% id in 408 aa and to Rhizobium loti glycol [...] |
| glcE protein network | https://string-db.org/network/257313.BP2904 | Glycolate oxidase subunit; Similar to Pseudomonas aeruginosa glycolate oxidase subunit GlcE or Pa5354 TR:Q9HTK4 (EMBL:AE004947) (359 aa) fasta scores: E(): 2.9e-36, 51.51% id in 363 aa, and to Es [...] |
| glcD protein network | https://string-db.org/network/257313.BP2905 | Similar to Escherichia coli glycolate oxidase subunit GlcD or Gox or b2979 SW:GLCD_ECOLI (P52075) (499 aa) fasta scores: E(): 1.7e-117, 60.2% id in 495 aa, and to Pseudomonas aeruginosa glycolate [...] |
| BP2906 protein network | https://string-db.org/network/257313.BP2906 | Putative oxidoreductase; Similar to many including: Rhizobium loti probable D-lactate dehydrogenase Mll1488 TR:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 5.3e-98, 55.26% id in 456 aa and [...] |
| fhaL protein network | https://string-db.org/network/257313.BP2907 | Adhesin; Similar to Bordetella bronchiseptica adhesin FhaB or BP1879 TR:Q9JP78 (EMBL:AF111796) (3634 aa)fasta scores: E(): 9e-125, 33.527% id in 2750 aa and to Bordetella pertussis filamentous he [...] |
| aroG-2 protein network | https://string-db.org/network/257313.BP2908 | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptuloson [...] |
| BP2909 protein network | https://string-db.org/network/257313.BP2909 | Conserved hypothetical protein; Similar to many proteins displaying simlarity to the E. coli suppressor protein TldD e.g. Neisseria meningitidis protein TldD homolog or Nma0367 TR:Q9JWH8 (EMBL:AL [...] |
| BP2910 protein network | https://string-db.org/network/257313.BP2910 | Putative hydrolase; Similar to many including: Neisseria meningitidis nitrilase Nmb0441 TR:Q9K0W5 (EMBL:AE002400) (270 aa) fasta scores: E(): 5.6e-52, 53.23% id in 263 aa and to Pseudomonas aerug [...] |
| bph3 protein network | https://string-db.org/network/257313.BP2911 | Putative DNA-binding protein (histone); Previously sequenced Bordetella pertussis Bph3 TR:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 5.2e-42, 100% id in 123 aa. |
| BP2912 protein network | https://string-db.org/network/257313.BP2912 | Transposase for IS481 element. |
| BP2913 protein network | https://string-db.org/network/257313.BP2913 | Conserved hypothetical protein; Similar to several including: Agrobacterium tumefaciens Agr_c_3680p agr_c_3680 TR:AAK87785 (EMBL:AE008119) (262 aa) fasta scores: E(): 5.1e-25, 37.02% id in 262 aa [...] |
| BP2914 protein network | https://string-db.org/network/257313.BP2914 | Similar to many putative RNA polymerase sigma factors e.g. Bradyrhizobium japonicum EcfA TR:Q9EXR8 (EMBL:AJ304855) (172 aa) fasta scores: E(): 1.6e-20, 51.22% id in 164 aa; Belongs to the sigma-7 [...] |
| BP2915 protein network | https://string-db.org/network/257313.BP2915 | Putative exported protein; Similar to several including: Pseudomonas syringae pvmaculicola hypothetical protein TR:AAK49553 (EMBL:AF359557) (126 aa) fasta scores: E(): 2.7e-25, 58.62% id in 116 a [...] |
| BP2916 protein network | https://string-db.org/network/257313.BP2916 | Conserved hypothetical protein; Similar to several including: Pseudomonas aeruginosa hypothetical protein Pa4395 TR:Q9HW11 (EMBL:AE004855) (159 aa) fasta scores: E(): 5.8e-27, 53.75% id in 160 aa [...] |
| BP2917 protein network | https://string-db.org/network/257313.BP2917 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa1044 TR:Q9I4T0 (EMBL:AE004536) (154 aa) fasta scores: E(): 2e-14, 43.05% id in 144 aa. |
| BP2918 protein network | https://string-db.org/network/257313.BP2918 | Conserved hypothetical protein; Similar to Bacillus halodurans Bh3119 protein TR:Q9K887 (EMBL:AP001517) (134 aa) fasta scores: E(): 2.8e-27, 50.39% id in 127 aa, and to Rhizobium meliloti hypothe [...] |
| BP2919 protein network | https://string-db.org/network/257313.BP2919 | Putative lipoprotein; Similar to Salmonella enterica subsp enterica serovar Typhi possible lipoprotein Sty3194 TR:CAD02868 (EMBL:AL627277) (250 aa) fasta scores: E(): 1.8e-19, 37.44% id in 243 aa [...] |
| BP2920 protein network | https://string-db.org/network/257313.BP2920 | Putative chromate transport protein; Similar to Pseudomonas aeruginosa probable transporter Pa4289 TR:Q9HWB1 (EMBL:AE004845) (401 aa) fasta scores: E(): 4.4e-72, 59.55% id in 403 aa and to Bacill [...] |
| BP2921 protein network | https://string-db.org/network/257313.BP2921 | Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa0435 TR:Q9I682 (EMBL:AE004480) (492 aa) fasta scores: E(): 1.8e-84, 51.11% id in 495 aa. |
| bfrG protein network | https://string-db.org/network/257313.BP2922 | Putative TonB-dependent receptor; Similar to Pseudomonas aeruginosa hypothetical protein Pa0434 TR:Q9I683 (EMBL:AE004480) (730 aa) fasta scores: E(): 7.2e-136, 49.52% id in 737 aa, and to Escheri [...] |
| BP2923 protein network | https://string-db.org/network/257313.BP2923 | Putative lipoprotein; No significant database hits. |
| BP2924 protein network | https://string-db.org/network/257313.BP2924 | Putative exported protein; Weakly similar to Burkholderia solanacearum probable signal peptide protein Rsp1034 TR:CAD18185 (EMBL:AL646082) (89 aa) fasta scores: E(): 2e-07, 49.33% id in 75 aa. |
| BP2925 protein network | https://string-db.org/network/257313.BP2925 | Similar to Rhizobium meliloti hypothetical protein Smb20529 TR:CAC48908 (EMBL:AL603643) (309 aa) fasta scores: E(): 3.9e-53, 52.76% id in 271 aa and to Caulobacter crescentus hypothetical protein [...] |
| BP2926 protein network | https://string-db.org/network/257313.BP2926 | Weakly similar to Rhizobium meliloti hypothetical protein Smb20528 TR:CAC48907 (EMBL:AL603643) (266 aa) fasta scores: E(): 3.4e-19, 35.08% id in 248 aa and to Caulobacter crescentus hypothetical [...] |
| BP2927 protein network | https://string-db.org/network/257313.BP2927 | Putative integral membrane protein; Similar in parts to Caulobacter crescentus hypothetical protein Cc3257 TR:Q9A3E7 (EMBL:AE005989) (150 aa) fasta scores: E(): 4.7e-15, 46.66% id in 135 aa and t [...] |
| BP2928 protein network | https://string-db.org/network/257313.BP2928 | Similar to many putative membrane transport proteins including: Streptomyces avermitilis MFS transporter protein TR:BAB69375 (EMBL:AB070955) (465 aa) fasta scores: E(): 6e-81, 54.64% id in 463 aa [...] |
| BP2929 protein network | https://string-db.org/network/257313.BP2929 | Similar to several putative ArsR-family regulatory proteins including: Rhizobium meliloti regulator NitR TR:Q9AH16 (EMBL:AF323118) (123 aa) fasta scores: E(): 1.4e-10, 44.89% id in 98 aa and Rhiz [...] |
| cyoD protein network | https://string-db.org/network/257313.BP2930 | Similar to Escherichia coli cytochrome O ubiquinol oxidase protein CyoD or b0429 or z0532 or Ecs0483 SW:CYOD_ECOLI (P18403) (109 aa) fasta scores: E(): 3.1e-15, 47.27% id in 110 aa and to Pseudom [...] |
| cyoC protein network | https://string-db.org/network/257313.BP2931 | Similar to Escherichia coli cytochrome O ubiquinol oxidase subunit III CyoC or b0430 SW:CYOC_ECOLI (P18402) (204 aa) fasta scores: E(): 1.9e-47, 60.29% id in 204 aa and to Pseudomonas putida cyto [...] |
| cyoB protein network | https://string-db.org/network/257313.BP2932 | Similar to Escherichia coli cytochrome O ubiquinol oxidase polypeptide I CyoB or B0431 or Z0534 or Ecs0485 SW:CYOB_ECOLI (P18401) (663 aa) fasta scores: E(): 4.1e-193, 70.27% id in 656 aa and to [...] |
| cyoA protein network | https://string-db.org/network/257313.BP2933 | Similar to Escherichia coli ubiquinol oxidase polypeptide II precursor CyoA or B0432 SW:CYOA_ECOLI (P18400) (315 aa) fasta scores: E(): 1.1e-59, 55.19% id in 279 aa and to Pseudomonas putida ubiq [...] |
| BP2934 protein network | https://string-db.org/network/257313.BP2934 | Similar to many two component system response regulators including: Xylella fastidiosa two-component system, regulatory protein Xf2578 TR:Q9PAE0 (EMBL:AE004064) (192 aa) fasta scores: E(): 6.1e-4 [...] |
| BP2935 protein network | https://string-db.org/network/257313.BP2935 | Similar to many two component system histidine kinases including: Xylella fastidiosa two-component system Xf2577 TR:Q9PAE1 (EMBL:AE004064) (405 aa) fasta scores: E(): 2.1e-72, 52.76% id in 398 aa [...] |
| BP2936 protein network | https://string-db.org/network/257313.BP2936 | Putative exported protein; No significant database hits. |
| BP2937 protein network | https://string-db.org/network/257313.BP2937 | Similar to Yersinia pestis conserved hypothetical protein Ypo2149 TR:CAC90958 (EMBL:AJ414151) (289 aa) fasta scores: E(): 7.6e-78, 67.24% id in 287 aa and to Salmonella typhimurium LT2 putative c [...] |
| BP2939 protein network | https://string-db.org/network/257313.BP2939 | Conserved hypothetical protein (pseudogene); Weakly similar to the N-terminus of several proteins including: Yersinia pestis hypothetical protein TR:Q9ZC77 (EMBL:AL031866) (190 aa) fasta scores: [...] |
| BP2940 protein network | https://string-db.org/network/257313.BP2940 | Similar to many putative membrane transport proteins including: Rhizobium meliloti putative transmembrane transport protein Sma1937 TR:AAK65720 (EMBL:AE007292) (412 aa) fasta scores: E(): 5.7e-47 [...] |
| BP2941 protein network | https://string-db.org/network/257313.BP2941 | Putative racemase; Similar to Streptomyces coelicolor putative racemase Sc5f2a.13 TR:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 1e-70, 55.22% id in 364 aa, and to Mycobacterium tuberculos [...] |
| BP2942 protein network | https://string-db.org/network/257313.BP2942 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1826 TR:Q9I2R9 (EMBL:AE004609) (301 aa) fasta scores: E(): 5.4e-29, 39% id in 300 aa and to Bacillus subtilis Als operon reg [...] |
| BP2943 protein network | https://string-db.org/network/257313.BP2943 | Putative exported protein; Similar to several proteins of undefined function e.g. Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.5e-43, 42.02% id in 3 [...] |
| BP2944 protein network | https://string-db.org/network/257313.BP2944 | Weakly similar to Sulfolobus tokodaii hypothetical protein St0068 TR:BAB65025 (EMBL:AP000981) (165 aa) fasta scores: E(): 4.8e-09, 30.87% id in 149 aa and to Rhodococcus sp NCIMB 9784 FAD-binding [...] |
| BP2946 protein network | https://string-db.org/network/257313.BP2946 | Hypothetical protein (pseudogene); HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, C-terminal domain. |
| BP2947 protein network | https://string-db.org/network/257313.BP2947 | Transposase for IS481 element. |
| BP2948 protein network | https://string-db.org/network/257313.BP2948 | Putative riboflavin-specific deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-ter [...] |
| BP2949 protein network | https://string-db.org/network/257313.BP2949 | Hypothetical protein; Similar in parts to several including: Agrobacterium tumefaciens TR:AAK86081 (EMBL:AE007965) (239 aa) fasta scores: E(): 1.6e-18, 50.82% id in 183 aa and to Pseudomonas aeru [...] |
| nrdR protein network | https://string-db.org/network/257313.BP2951 | Putative AraC-family transcriptional regulator (pseudogene); Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to t [...] |
| glyA protein network | https://string-db.org/network/257313.BP2952 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...] |
| BP2953 protein network | https://string-db.org/network/257313.BP2953 | Conserved hypothetical protein; Similar to Thauera aromatica ypothetical protein BbsI TR:Q9KJE6 (EMBL:AF173961) (209 aa) fasta scores: E(): 2.9e-49, 58.04% id in 205 aa and to Xylella fastidiosa [...] |
| tyrS protein network | https://string-db.org/network/257313.BP2954 | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...] |
| BP2955 protein network | https://string-db.org/network/257313.BP2955 | Transposase for IS481 element. |
| BP2956 protein network | https://string-db.org/network/257313.BP2956 | Hypothetical protein; Weakly similar to several including: Pseudomonas aeruginosa hypothetical protein Pa0667 TR:Q9I5Q4 (EMBL:AE004501) (447 aa) fasta scores: E(): 5.2e-42, 39.83% id in 369 aa an [...] |
| anmK protein network | https://string-db.org/network/257313.BP2957 | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6 [...] |
| erpA protein network | https://string-db.org/network/257313.BP2958 | Conserved hypothetical protein; Required for insertion of 4Fe-4S clusters. |
| BP2959 protein network | https://string-db.org/network/257313.BP2959 | Putative integral membrane protein; Weakly similar in parts to Pseudomonas aeruginosa hypothetical protein Pa0663 TR:Q9I5Q8 (EMBL:AE004501) (239 aa) fasta scores: E(): 9.1e-06, 28.82% id in 222 a [...] |
| argC protein network | https://string-db.org/network/257313.BP2960 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...] |
| rpsI protein network | https://string-db.org/network/257313.BP2961 | Similar to Escherichia coli 30s ribosomal protein S9 RpsI or b3230 or z4588 or Ecs4103 SW:RS9_ECOLI (P02363) (129 aa) fasta scores: E(): 3.5e-30, 65.35% id in 127 aa and to Neisseria meningitidis [...] |
| rplM protein network | https://string-db.org/network/257313.BP2962 | 50s ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...] |
| BP2963 protein network | https://string-db.org/network/257313.BP2963 | Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. |
| BP2964 protein network | https://string-db.org/network/257313.BP2964 | Conserved hypothetical protein; Similar to several proteins of the PmbA/TldD family including: Pseudomonas aeruginosa PmbA protein TR:Q9HVU9 (EMBL:AE004861) (449 aa) fasta scores: E(): 1e-82, 52. [...] |
| BP2965 protein network | https://string-db.org/network/257313.BP2965 | Conserved hypothetical protein; Weakly similar to several proteins of undefined function including: Pasteurella multocida hypothetical protein Pm0119 TR:Q9CPC8 (EMBL:AE006047) (180 aa) fasta scor [...] |
| BP2966 protein network | https://string-db.org/network/257313.BP2966 | Similar to many carboxylesterases including: Xylella fastidiosa Xf1624 TR:Q9PCY0 (EMBL:AE003989) (224 aa) fasta scores: E(): 1.5e-37, 49.53% id in 216 aa and to Pseudomonas fluorescens EstA SW:ES [...] |
| BP2969 protein network | https://string-db.org/network/257313.BP2969 | Putative exported protein (pseudogene); C in pertussis; (T)C in parapertussis and bronchiseptica. |
| BP2970 protein network | https://string-db.org/network/257313.BP2970 | Putative ABC transport proteins, inner membrane component; Similar to Clostridium acetobutylicum uncharacterised permease Cac0618 TR:Q97LE4 (EMBL:AE007577) (264 aa) fasta scores: E(): 3.7e-38, 40 [...] |
| BP2971 protein network | https://string-db.org/network/257313.BP2971 | Putative hydrolase; Similar to many proteins of undefined function including: Rhizobium loti Mlr4169 protein TR:Q98EN3 (EMBL:AP003003) (223 aa) fasta scores: E(): 5.1e-11, 32.74% id in 226 aa, an [...] |
| BP2972 protein network | https://string-db.org/network/257313.BP2972 | Similar to Streptomyces coelicolor conserved hypothetical protein Scf76.17 TR:Q9RJF7 (EMBL:AL121600) (130 aa) fasta scores: E(): 6.3e-27, 58.91% id in 129 aa, and to Bacillus subtilis YurT protei [...] |
| dbpA protein network | https://string-db.org/network/257313.BP2973 | Similar to Pseudomonas aeruginosa RNA helicase DbpA or Pa0455 TR:Q9I663 (EMBL:AE004483) (458 aa) fasta scores: E(): 1.8e-109, 63.83% id in 459 aa, and to Escherichia coli ATP-dependent RNA helica [...] |
| BP2974 protein network | https://string-db.org/network/257313.BP2974 | Putative integral membrane protein; Similar to several including: Bacillus halodurans Bh2161 protein TR:Q9KAX5 (EMBL:AP001514) (477aa) fasta scores: E(): 1.3e-38, 51.11% id in 493 aa, and to Baci [...] |
| BP2975 protein network | https://string-db.org/network/257313.BP2975 | Similar to several including: Streptomyces coelicolor putative GntR-family transcriptional regulator Scgd3.11C TR:Q9XA67 (EMBL:AL096822) (216 aa) fasta scores: E(): 3.1e-14, 36.09% id in 205 aa a [...] |
| BP2976 protein network | https://string-db.org/network/257313.BP2976 | Transposase for IS481 element. |
| BP2977 protein network | https://string-db.org/network/257313.BP2977 | Conserved hypothetical protein; Similar to several proteins of undefined function e.g. Escherichia coli O157:H7 hypothetical 52.7 kDa protein Ecs3450 TR:BAB36873 (EMBL:AP002562) (484 aa) fasta sc [...] |
| gltX protein network | https://string-db.org/network/257313.BP2978 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...] |
| BP2979 protein network | https://string-db.org/network/257313.BP2979 | Similar to many proposed transport proteins e.g. Clostridium acetobutylicum permease, MDR related, probably tetracycline resistance protein Cap0124 TR:Q97TH7 (EMBL:AE001438) (393 aa) fasta scores [...] |
| BP2980 protein network | https://string-db.org/network/257313.BP2980 | Putative lipoprotein; No significant database hits. |
| BP2981 protein network | https://string-db.org/network/257313.BP2981 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4508 TR:Q9HVR3 (EMBL:AE004864) (157 aa) fasta scores: E(): 7.9e-21, 44% id in 150 aa and to Caulobacter crescentus leucine-r [...] |
| nrdA protein network | https://string-db.org/network/257313.BP2983 | Putative pyruvate ferredoxin/flavodoxin oxidoreductase (pseudogene); Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding [...] |
| nrdB protein network | https://string-db.org/network/257313.BP2984 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Be [...] |
| bpH1 protein network | https://string-db.org/network/257313.BP2985 | Histone protein; Previously sequenced in Bordetella pertussis as histone H1 TR:Q45370 (EMBL:L37438) (182 aa) fasta scores: E(): 1.1e-39, 97.14% id in 175 aa. |
| BP2986 protein network | https://string-db.org/network/257313.BP2986 | Putative integral membrane protein; Similar to Escherichia coli hypothetical protein YggT or b2952 or z4297 or Ecs3828 SW:YGGT_ECOLI (P52058) (188 aa) fasta scores: E(): 3.3e-14, 35.75% id in 179 [...] |
| dltA protein network | https://string-db.org/network/257313.BP2987 | Putative D-alanine-D-alanyl carrier protein ligase; Similar to Lactococcus lactis D-alanine activating enzyme DltA TR:Q9CG49 (EMBL:AE006358) (499 aa) fasta scores: E(): 6.8e-40, 32.8% id in 445 a [...] |
| dltB protein network | https://string-db.org/network/257313.BP2988 | Putative protein involved in the transfer of D-alanine into teichoic acids; Similar to Bacillus subtilis protein DltB thought to be involved in D-alanine transport SW:DLTB_BACSU (P39580) (395 aa) [...] |
| BP2989 protein network | https://string-db.org/network/257313.BP2989 | Hypothetical protein; No significant database matches. |
| dltD protein network | https://string-db.org/network/257313.BP2990 | Putative protein involved in the transfer of D-alanine into teichoic acids; Similar to Staphylococcus xylosus DltD dltD SWALL:Q9X2N7 (EMBL:AF032440) (382 aa) fasta scores: E(): 3.8e-07, 21.71% id [...] |
| BP2991 protein network | https://string-db.org/network/257313.BP2991 | Acyl carrier protein; Similar to in regions to: Escherichia coli O157:H7 EDL933 putative acyl carrier protein z4853 TR:AAG58588 (EMBL:AE005571) (85 aa) fasta scores: E(): 0.0049, 37.03% id in 81 [...] |
| pcp protein network | https://string-db.org/network/257313.BP2992 | Putative lipoprotein; Similar to many Pectobacterium carotovorum subspcarotovorum. outer membrane lipoprotein Pcp TR:Q9RB08 (EMBL:AF168687) (155 aa) fasta scores: E(): 3.6e-13, 40.64% id in 155 a [...] |
| BP2993 protein network | https://string-db.org/network/257313.BP2993 | Similar to Streptomyces coelicolor putative kinase Sc6g10.31C TR:Q9X816 (EMBL:AL049497) (338 aa) fasta scores: E(): 1.2e-28, 35.69% id in 311 aa and in the C-terminal region to Haemophilus influe [...] |
| BP2994 protein network | https://string-db.org/network/257313.BP2994 | Possible membrane protein; Weakly similar in parts to Pseudomonas aeruginosa hypothetical protein Pa4851 TR:Q9HUW2 (EMBL:AE004898) (421 aa) fasta scores: E(): 0.00026, 27.27% id in 418 aa. |
| fabG-6 protein network | https://string-db.org/network/257313.BP2996 | Ribosomal protein L11 methyltransferase (Pseudogene); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrie [...] |
| fabE protein network | https://string-db.org/network/257313.BP2997 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the c [...] |
| aroQ protein network | https://string-db.org/network/257313.BP2998 | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. |
| BP2999 protein network | https://string-db.org/network/257313.BP2999 | Thioredoxin; Similar in parts to many thioredoxins e.g. Xylella fastidiosa thioredoxin Xf1990 TR:Q9PBZ5 (EMBL:AE004018) (211 aa) fasta scores: E(): 3.6e-12, 35.46% id in 141 aa and to Bradyrhizob [...] |
| mpl protein network | https://string-db.org/network/257313.BP3000 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate [...] |
| BP3001 protein network | https://string-db.org/network/257313.BP3001 | Similar to Pseudomonas aeruginosa hypothetical protein PA4968 TR:Q9HUJ7 (EMBL:AE004909) (206 aa) fasta scores: E(): 2.5e-20, 42.56% id in 195 aa. |
| BP3002 protein network | https://string-db.org/network/257313.BP3002 | Similar to Neisseria meningitidis hypothetical protein NMA2205 TR:Q9JSP1 (EMBL:AL162758) (635 aa) fasta scores: E(): 1.2e-70, 40.63% id in 598 aa, and to Neisseria meningitidis ribonuclease II-re [...] |
| BP3003 protein network | https://string-db.org/network/257313.BP3003 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0406 TR:Q9I698 (EMBL:AE004477) (319 aa) fasta scores: E(): 7.2e-18, 31.63% id in 294 aa. |
| aroE protein network | https://string-db.org/network/257313.BP3004 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshi [...] |
| BP3005 protein network | https://string-db.org/network/257313.BP3005 | Transposase for IS481 element. |
| pagP protein network | https://string-db.org/network/257313.BP3006 | Putative lipoprotein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. |
| BP3007 protein network | https://string-db.org/network/257313.BP3007 | Conserved hypothetical protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Bel [...] |
| grp protein network | https://string-db.org/network/257313.BP3008 | Similar to Zymomonas mobilis glutamate uptake regulatory protein Grp SW:GRP_ZYMMO (P74996) (164 aa) fasta scores: E(): 1.1e-25, 51.67% id in 149 aa. |
| BP3009 protein network | https://string-db.org/network/257313.BP3009 | Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR or B1189 or Z1952 or ECS1684 SW:DADA_ECOLI (P29011) (432 aa) fasta scores: E(): 1.2e-60, 41.62% id in 418 aa. |
| BP3010 protein network | https://string-db.org/network/257313.BP3010 | Similar to Rhizobium meliloti putative oxidoreductase protein SMC01157 TR:CAC41799 (EMBL:AL591783) (259 aa) fasta scores: E(): 3e-26, 39.01% id in 264 aa. |
| BP3011 protein network | https://string-db.org/network/257313.BP3011 | Hypothetical protein; Weakly similar to Pseudomonas aeruginosa hypothetical protein PA2602 TR:Q9I0N5 (EMBL:AE004689) (201 aa) fasta scores: E(): 2.8e-08, 28.57% id in 133 aa. Also similar to BP28 [...] |
| BP3012 protein network | https://string-db.org/network/257313.BP3012 | Putative membrane protein; Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.3e-40, 39.02% id in 328 aa. |
| BP3013 protein network | https://string-db.org/network/257313.BP3013 | Hypothetical protein; Poor database matches. Weakly similar to the N-terminal regions of Agrobacterium tumefaciens hypothetical protein AGR_C_2627p TR:AAK87216 (EMBL:AE008068) (292 aa) fasta scor [...] |
| secA protein network | https://string-db.org/network/257313.BP3014 | Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...] |
| BP3015 protein network | https://string-db.org/network/257313.BP3015 | Putative peptidase family M23/M37 protein; Similar to Shewanella violacea hypothetical protein YebA TR:Q9F1M5 (EMBL:AB052554) (299 aa) fasta scores: E(): 1.6e-20, 37.33% id in 233 aa, and to Xyle [...] |
| BP3016 protein network | https://string-db.org/network/257313.BP3016 | Conserved hypothetical protein; Poor database matches. Similar to Neisseria meningitidis hypothetical protein NMA1734 TR:Q9JTK8 (EMBL:AL162757) (140 aa) fasta scores: E(): 0.01, 29% id in 131 aa. |
| lpxC protein network | https://string-db.org/network/257313.BP3017 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed st [...] |
| ftsZ protein network | https://string-db.org/network/257313.BP3018 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...] |
| ftsA protein network | https://string-db.org/network/257313.BP3019 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. |
| ftsQ protein network | https://string-db.org/network/257313.BP3020 | Putative cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division [...] |
| ddlB protein network | https://string-db.org/network/257313.BP3021 | D-alanine--D-alanine ligase B; Cell wall formation. |
| murC protein network | https://string-db.org/network/257313.BP3022 | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. |
| murG protein network | https://string-db.org/network/257313.BP3023 | UDP-N-acetylglucosamine--N-acetylmuramyl-; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undeca [...] |
| ftsW protein network | https://string-db.org/network/257313.BP3024 | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. |
| murD protein network | https://string-db.org/network/257313.BP3025 | Putative peptidoglycan synthesis protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. |
| murX protein network | https://string-db.org/network/257313.BP3026 | phospho-N-acetylmuramoyl-pentapeptide-transfera se; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...] |
| murE protein network | https://string-db.org/network/257313.BP3027 | Possible murein precusor biosynthesis bifunctional protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the [...] |
| ftsI protein network | https://string-db.org/network/257313.BP3028 | Peptidoglycan synthetase precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. |
| ftsL protein network | https://string-db.org/network/257313.BP3029 | Putative cell division protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division prot [...] |
| mraW protein network | https://string-db.org/network/257313.BP3030 | S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. |
| mraZ protein network | https://string-db.org/network/257313.BP3031 | Similar to Escherichia coli hypothetical protein YabB or B0081 SW:YABB_ECOLI (P22186) (152 aa) fasta scores: E(): 1e-19, 43.7% id in 135 aa, and to Neisseria meningitidis hypothetical protein NMA [...] |
| BP3034 protein network | https://string-db.org/network/257313.BP3034 | Similar to Escherichia coli ABC transporter ATP-binding protein Uup or B0949 SW:UUP_ECOLI (P43672) (635 aa) fasta scores: E(): 9.7e-71, 46.03% id in 630 aa, and to Caulobacter crescentus holdfast [...] |
| pyrC-2 protein network | https://string-db.org/network/257313.BP3035 | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. |
| BP3036 protein network | https://string-db.org/network/257313.BP3036 | Putative hydrolase; Similar to Rhizobium meliloti putative hippurate hydrolase protein TR:CAC45132 (EMBL:AL591784) (389 aa) fasta scores: E(): 1.6e-72, 52.52% id in 377 aa. |
| BP3037 protein network | https://string-db.org/network/257313.BP3037 | Similar to Chlamydia muridarum hypothetical protein TC0745 TR:Q9PJT3 (EMBL:AE002343) (86 aa) fasta scores: E(): 5.8e-15, 54.21% id in 83 aa. |
| BP3038 protein network | https://string-db.org/network/257313.BP3038 | Putative membrane protein; Similar to Caulobacter crescentus hypothetical protein CC0411 TR:Q9AB23 (EMBL:AE005714) (132 aa) fasta scores: E(): 0.00047, 32.77% id in 119 aa, and to the C-terminal [...] |
| lrp-3 protein network | https://string-db.org/network/257313.BP3039 | Similar to Escherichia coli, leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI or B0889 or Z1234 or ECD0974 SW:LRP_ECOLI (P19494) (163 aa) fasta scores: E(): 3.6e-23, 44.23 [...] |
| bllY protein network | https://string-db.org/network/257313.BP3040 | Putative hemolysin; Similar to Vibrio vulnificus hemolysin VllY SW:VLLY_VIBVU (O06695) (357 aa) fasta scores: E(): 9.6e-47, 56.78% id in 361 aa, and to Pseudomonas aeruginosa 4-hydroxyphenylpyruv [...] |
| msrA protein network | https://string-db.org/network/257313.BP3041 | Putative methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methion [...] |
| cyt protein network | https://string-db.org/network/257313.BP3042 | Similar to Nitrosomonas europaea Cytochrome c-552 precursor Cyt SW:C552_NITEU (P95339) (103 aa) fasta scores: E(): 8.4e-16, 53.46% id in 101 aa. |
| ilvD-2 protein network | https://string-db.org/network/257313.BP3043 | Similar to Lactococcus lactis dihydroxy-acid dehydratase IlvD SW:ILVD_LACLA (Q02139) (570 aa) fasta scores: E(): 5.1e-94, 47.13% id in 558 aa, and to Bacillus subtilis dihydroxy-acid dehydratase [...] |
| lgt protein network | https://string-db.org/network/257313.BP3044 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...] |
| BP3047 protein network | https://string-db.org/network/257313.BP3047 | Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the forma [...] |
| BP3048 protein network | https://string-db.org/network/257313.BP3048 | Hypothetical protein; Low similarity to N-teminal region of Mycobacterium tuberculosis hypothetical protein RV2229c or MT2288 or MTCY427.10c SW:YM29_MYCTU (Q10513) (245 aa) fasta scores: E(): 0.3 [...] |
| BP3049 protein network | https://string-db.org/network/257313.BP3049 | Transposase for IS481 element. |
| BP3050 protein network | https://string-db.org/network/257313.BP3050 | Putative membrane protein; Similar to Agrobacterium tumefaciens AGR_C_182p TR:AAK85937 (EMBL:AE007953) (153 aa) fasta scores: E(): 2.8e-11, 35.33% id in 133 aa. |
| BP3051 protein network | https://string-db.org/network/257313.BP3051 | Putative membrane protein; Similar to Agrobacterium tumefaciens Agr_c_184p TR:AAK85938 (EMBL:AE007953) (501 aa) fasta scores: E(): 5.5e-122, 65.86% id in 501 aa, and to Rhizobium meliloti conserv [...] |
| BP3052 protein network | https://string-db.org/network/257313.BP3052 | Putative gamma-glutamyltranspeptidase; Similar to Mycobacterium tuberculosis CDC1551 gamma-glutamyltransferase MT0797 TR:AAK45039 (EMBL:AE006970) (512 aa) fasta scores: E(): 4.2e-112, 56.73% id i [...] |
| BP3053 protein network | https://string-db.org/network/257313.BP3053 | Putative oxidoreductase; Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR SW:GLXR_ECOLI (P77161) (292 aa) fasta scores: E(): 4.5e-25, 34.54% id in 275 aa, and to Rhizobium mel [...] |
| acpD-2 protein network | https://string-db.org/network/257313.BP3055 | C-terminal region of acyl carrier protein phosphodiesterase (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. This CDS is the C-terminal region of BP0497. Similar [...] |
| ung protein network | https://string-db.org/network/257313.BP3056 | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. |
| BP3057 protein network | https://string-db.org/network/257313.BP3057 | Similar to Escherichia coli putative ATP-dependent RNA helicase RhlE SW:RHLE_ECOLI (P25888) (454 aa) fasta scores: E(): 9.2e-52, 43.36% id in 475 aa, and to Escherichia coli cold-shock DeaD-box p [...] |
| BP3058 protein network | https://string-db.org/network/257313.BP3058 | Similar to Neisseria meningitidis hypothetical protein NMA2076 TR:Q9JSY7 (EMBL:AL162758) (405 aa) fasta scores: E(): 2.8e-46, 40.49% id in 405 aa. |
| cca protein network | https://string-db.org/network/257313.BP3059 | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order [...] |
| BP3060 protein network | https://string-db.org/network/257313.BP3060 | Putative transglycosylase; Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt SW:SLT_ECOLI (645 aa) fasta scores: E(): 1.4e-22, 23.39% id in 607 aa, and to Neisseria [...] |
| BP3061 protein network | https://string-db.org/network/257313.BP3061 | 5-formyltetrahydrofolate cyclo-ligase family protein; Similar to Rhizobium meliloti conserved hypothetical protein SMC02594 TR:CAC41462 (EMBL:AL591782) (222 aa) fasta scores: E(): 1.2e-14, 34.42% [...] |
| BP3062 protein network | https://string-db.org/network/257313.BP3062 | Similar to Streptomyces coelicolor putative integral membrane transport protein 2SCG2.23 TR:Q9EX30 (EMBL:AL445963) (478 aa) fasta scores: E(): 3.6e-57, 42.82% id in 418 aa, and to Escherichia col [...] |
| BP3063 protein network | https://string-db.org/network/257313.BP3063 | Putative aminohydrolase; Similar to Rhizobium loti acetylpolyamine aminohydrolase MLL0103 TR:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 3.3e-59, 44.67% id in 338 aa, and to Mycoplana ramo [...] |
| BP3064 protein network | https://string-db.org/network/257313.BP3064 | Similar to Rhizobium meliloti putative transcriptional regulator, LysR family protein, SMB21180 TR:CAC49246 (EMBL:AL603645) (317 aa) fasta scores: E(): 1.2e-32, 36.89% id in 290 aa, and to Chroma [...] |
| BP3065 protein network | https://string-db.org/network/257313.BP3065 | Transposase for IS481 element. |
| BP3066 protein network | https://string-db.org/network/257313.BP3066 | Similar to Pseudomonas aeruginosa 5,10-methylenetetrahydrofolate reductase MetF or PA0430 TR:Q9I687 (EMBL:AE004480) (290 aa) fasta scores: E(): 3.4e-64, 60.93% id in 279 aa, and to Escherichia co [...] |
| BP3067 protein network | https://string-db.org/network/257313.BP3067 | Putative membrane protein; Similar to Synechocystis sp hypothetical protein SLR0284 TR:P74406 (EMBL:D90914) (116 aa) fasta scores: E(): 3.2e-13, 44.64% id in 112 aa, and to Streptomyces coelicolo [...] |
| acyH protein network | https://string-db.org/network/257313.BP3068 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. |
| BP3069 protein network | https://string-db.org/network/257313.BP3069 | Similar to Caulobacter crescentus glycosyl transferase, group 1 family protein CC3345 TR:Q9A361 (EMBL:AE005996) (363 aa) fasta scores: E(): 2.1e-58, 47.8% id in 341 aa, and to Rhizobium loti prob [...] |
| BP3070 protein network | https://string-db.org/network/257313.BP3070 | Similar to Escherichia coli hypothetical protein YdhL SW:YDHL_ECOLI (P76188) (125 aa) fasta scores: E(): 0.039, 36.17% id in 94 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothet [...] |
| metK protein network | https://string-db.org/network/257313.BP3071 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...] |
| BP3072 protein network | https://string-db.org/network/257313.BP3072 | Putative acyltransferase; Similar to Xylella fastidiosa lipid A biosynthesis lauroyl acyltransferase XF1348 TR:Q9PDN1 (EMBL:AE003967) (316 aa) fasta scores: E(): 7.9e-20, 31.08% id in 296 aa, and [...] |
| BP3073 protein network | https://string-db.org/network/257313.BP3073 | Putative acyltransferase; Similar to Neisseria meningitidis HtrB/MsbB family protein NMB1418 TR:Q9JYV2 (EMBL:AE002491) (289 aa) fasta scores: E(): 1.2e-32, 35.14% id in 276 aa, and to Escherichia [...] |
| dapF protein network | https://string-db.org/network/257313.BP3074 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...] |
| BP3075 protein network | https://string-db.org/network/257313.BP3075 | Similar to Xylella fastidiosa hypothetical protein XF1482 TR:Q9PD97 (EMBL:AE003977) (226 aa) fasta scores: E(): 6.6e-13, 32.27% id in 220 aa. |
| xerC protein network | https://string-db.org/network/257313.BP3076 | Putative integrase/recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to con [...] |
| BP3077 protein network | https://string-db.org/network/257313.BP3077 | Similar to Neisseria meningitidis putative outer-membrane receptor protein NMA1161 TR:Q9JUS2 (EMBL:AL162755) (764 aa) fasta scores: E(): 2e-34, 35.94% id in 740 aa. |
| BP3078 protein network | https://string-db.org/network/257313.BP3078 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical transmembrane protein SMC02986 TR:CAC47457 (EMBL:AL591792) (344 aa) fasta scores: E(): 2.4e-23, 44.54% id in 330 aa; Belongs [...] |
| BP3079 protein network | https://string-db.org/network/257313.BP3079 | Similar to Rhizobium meliloti conserved hypothetical protein SMC02985 TR:CAC47456 (EMBL:AL591792) (214 aa) fasta scores: E(): 2.1e-09, 27.91% id in 197 aa. |
| BP3080 protein network | https://string-db.org/network/257313.BP3080 | Similar to Rhizobium loti ABC transporter, periplasmic binding protein MLL8313 TR:Q983I7 (EMBL:AP003013) (313 aa) fasta scores: E(): 8.5e-44, 44.72% id in 313 aa, and to Neisseria meningitidis ad [...] |
| BP3081 protein network | https://string-db.org/network/257313.BP3081 | Similar to Rhizobium loti ABC transporter, permease protein MLL8314 TR:Q983I6 (EMBL:AP003013) (291 aa) fasta scores: E(): 6.8e-52, 59.85% id in 269 aa, and to Neisseria meningitidis membrane prot [...] |
| BP3082 protein network | https://string-db.org/network/257313.BP3082 | Similar to Rhizobium loti ABC transporter, ATP-binding protein MLL8315 TR:Q983I5 (EMBL:AP003013) (272 aa) fasta scores: E(): 3.5e-36, 51.73% id in 230 aa, and to Neisseria meningitidis ABC transp [...] |
| BP3083 protein network | https://string-db.org/network/257313.BP3083 | Putative regulatory protein; Similar to Pseudomonas aeruginosa transcriptional regulator NP20 or PA5499 TR:Q9HT74 (EMBL:AE004962) (167 aa) fasta scores: E(): 6.6e-17, 37.34% id in 158 aa, and to [...] |
| BP3084 protein network | https://string-db.org/network/257313.BP3084 | Similar to Caulobacter crescentus hypothetical protein CC0321 TR:Q9ABB0 (EMBL:AE005705) (365 aa) fasta scores: E(): 9.5e-60, 47.79% id in 362 aa. |
| dksA protein network | https://string-db.org/network/257313.BP3085 | Putative dnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of s [...] |
| hslV protein network | https://string-db.org/network/257313.BP3086 | ATP-dependent protease heat shock protein; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. |
| hslU protein network | https://string-db.org/network/257313.BP3087 | ATP-dependent Hsl protease ATP-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by H [...] |
| BP3088 protein network | https://string-db.org/network/257313.BP3088 | Putative exported protein; Similar to Agrobacterium tumefaciens hypothetical protein Agr_l_1727p TR:AAK89437 (EMBL:AE008284) (94 aa) fasta scores: E(): 9.9e-08, 43.67% id in 87 aa. |
| BP3090 protein network | https://string-db.org/network/257313.BP3090 | Similar to Pseudomonas aeruginosa hypothetical protein PA4399 TR:Q9HW07 (EMBL:AE004855) (192 aa) fasta scores: E(): 1.4e-26, 48.95% id in 192 aa. Similar to BP0266, BP1766, BP2719, BP3683, and BP [...] |
| BP3091 protein network | https://string-db.org/network/257313.BP3091 | Transposase for IS481 element. |
| BP3092 protein network | https://string-db.org/network/257313.BP3092 | Similar to Neisseria meningitidis phopholipase D-family protein NMA1646 TR:Q9JTT1 (EMBL:AL162756) (525 aa) fasta scores: E(): 5.7e-86, 49.51% id in 519 aa. |
| modD protein network | https://string-db.org/network/257313.BP3093 | Molybdenum transport ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC tra [...] |
| modC protein network | https://string-db.org/network/257313.BP3094 | Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membran [...] |
| modB protein network | https://string-db.org/network/257313.BP3095 | Similar to Azotobacter vinelandii molybdate-binding periplasmic protein precursor ModB SW:MODB_AZOVI (EMBL:X69077) (252 aa) fasta scores: E(): 7.4e-61, 69.7% id in 241 aa. Also similar to BP3105, [...] |
| BP3096 protein network | https://string-db.org/network/257313.BP3096 | Putative hydrolase; Similar to Saccharomyces cerevisiae hypothetical protein SW:YN93_YEAST (EMBL:Z71679) (290 aa) fasta scores: E(): 1.3e-44, 44.16% id in 274 aa. |
| BP3097 protein network | https://string-db.org/network/257313.BP3097 | Similar to Streptomyces coelicolor hypothetical protein SCE59.14c TR:Q9L1U0 (EMBL:AL138851) (196 aa) fasta scores: E(): 2.2e-09, 33.33% id in 195 aa. |
| BP3098 protein network | https://string-db.org/network/257313.BP3098 | Hypothetical protein; No significant database matches. |
| BP3099 protein network | https://string-db.org/network/257313.BP3099 | Putative exported protein; No significant database matches. |
| BP3100 protein network | https://string-db.org/network/257313.BP3100 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical/unknown transmembrane protein SMC00031 TR:CAC45518 (EMBL:AL591785) (159 aa) fasta scores: E(): 9.6e-08, 36.42% id in 140 aa. |
| BP3102 protein network | https://string-db.org/network/257313.BP3102 | Putative TonB-dependent receptor (Pseudogene); CAT in pertussis; C(-)T deleted in parapertussis and bronciseptica. |
| BP3103 protein network | https://string-db.org/network/257313.BP3103 | Transposase for IS481 element. |
| BP3105 protein network | https://string-db.org/network/257313.BP3105 | N-terminal region of a putative membrane protein (Pseudogene); 3 probable transmembrane helices predicted for BP3104 by TMHMM2.0 at aa 21-43, 58-80 and 87-106. |
| BP3106 protein network | https://string-db.org/network/257313.BP3106 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-51, 43.93% id in 330 aa. |
| BP3107 protein network | https://string-db.org/network/257313.BP3107 | Similar to Streptomyces coelicolor putative gamma-glutamyltranspeptidase SC3C8.26 TR:O69935 (EMBL:AL023861) (603 aa) fasta scores: E(): 3.6e-36, 31.41% id in 573 aa, and to Escherichia coli gamma [...] |
| BP3108 protein network | https://string-db.org/network/257313.BP3108 | Similar to Pseudomonas aeruginosa hypothetical protein PA1917 TR:Q9I2I7 (EMBL:AE004617) (115 aa) fasta scores: E(): 8.7e-17, 50% id in 114 aa, and to Pseudomonas aeruginosa hypothetical protein P [...] |
| BP3109 protein network | https://string-db.org/network/257313.BP3109 | Similar to Pseudomonas aeruginosa hypothetical protein PA1918 TR:Q9I2I6 (EMBL:AE004617) (466 aa) fasta scores: E(): 1.4e-104, 59.09% id in 462 aa, and to Pseudomonas aeruginosa hypothetical prote [...] |
| BP3110 protein network | https://string-db.org/network/257313.BP3110 | Probable MerR-family transcriptional regulator; Similar to Rhizobium meliloti hypothetical protein SMB21187 TR:CAC49253 (EMBL:AL603645) (276 aa) fasta scores: E(): 3.8e-34, 41.32% id in 271 aa, a [...] |
| BP3111 protein network | https://string-db.org/network/257313.BP3111 | Transposase for IS481 element. |
| BP3114 protein network | https://string-db.org/network/257313.BP3114 | Putative DNA helicase (Pseudogene); TAA stop in pertussis. This CDS seems to be missing in parapertussis. |
| BP3115 protein network | https://string-db.org/network/257313.BP3115 | Conserved hypothetical protein; Very low similarity to Sulfolobus tokodaii 382aa long hypothetical protein ST2010 TR:BAB67105 (EMBL:AP000988) (382 aa) fasta scores: E(): 0.0051, 20.61% id in 388 [...] |
| BP3116 protein network | https://string-db.org/network/257313.BP3116 | Putative modification methylase; Similar in its N-terminal region to Thermoplasma volcanium modification methylase TVG1542167 TR:Q978C7 (EMBL:AP000996) (616 aa) fasta scores: E(): 1.4e-12, 25.46% [...] |
| BP3117 protein network | https://string-db.org/network/257313.BP3117 | Putative restriction endonuclease; Low similarity to Thermoplasma volcanium TVG1539639 protein TR:Q978C8 (EMBL:AP000996) (843 aa) fasta scores: E(): 0.0031, 22.79% id in 974 aa. |
| BP3118 protein network | https://string-db.org/network/257313.BP3118 | Conserved hypothetical protein; Similar to Escherichia coli O157:H7 hypothetical 48.5 kDa protein ECS4465 TR:BAB37888 (EMBL:AP002566) (431 aa) fasta scores: E(): 7.4e-09, 27.41% id in 321 aa. |
| BP3120 protein network | https://string-db.org/network/257313.BP3120 | Putative integrase; Similar to Escherichia coli prophage cp4-57 integrase IntA or SlpA or IntX or B2622 SW:INTA_ECOLI (P32053) (413 aa) fasta scores: E(): 4.4e-37, 31.93% id in 404 aa; Belongs to [...] |
| ychF protein network | https://string-db.org/network/257313.BP3121 | Conserved hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. |
| BP3122 protein network | https://string-db.org/network/257313.BP3122 | Putative membrane protein; No significant database matches. |
| pth protein network | https://string-db.org/network/257313.BP3123 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. |
| rplY protein network | https://string-db.org/network/257313.BP3124 | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 fa [...] |
| prsA protein network | https://string-db.org/network/257313.BP3125 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...] |
| ispE protein network | https://string-db.org/network/257313.BP3126 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. |
| lolB protein network | https://string-db.org/network/257313.BP3127 | Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. |
| BP3128 protein network | https://string-db.org/network/257313.BP3128 | Similar to Pseudomonas aeruginosa hypothetical protein PA4667 SW:YAG7_PSEAE (P42810) (590 aa) fasta scores: E(): 9.6e-24, 28.9% id in 609 aa, and to Neisseria meningitidis putative periplasmic pr [...] |
| mutM protein network | https://string-db.org/network/257313.BP3129 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...] |
| BP3130 protein network | https://string-db.org/network/257313.BP3130 | Putative cyclase; Similar to Aquifex aeolicus beta lactamase precursor CphA1 or AQ_1798 TR:O67667 (EMBL:AE000757) (326 aa) fasta scores: E(): 3.2e-20, 28.62% id in 297 aa. |
| BP3131 protein network | https://string-db.org/network/257313.BP3131 | Putative oxygenase; Similar to Streptomyces argillaceus oxygenase MtmOII TR:O86481 (EMBL:AJ007932) (531 aa) fasta scores: E(): 4.6e-36, 33.57% id in 557 aa, and to Escherichia coli 3-(3-hydroxy-p [...] |
| BP3132 protein network | https://string-db.org/network/257313.BP3132 | Similar to Ralstonia solanacearum hypothetical protein rsp0701 rsp0701 or rs01748 SWALL:Q8XRY0 (EMBL:AL646080) (68 aa) fasta scores: E(): 2.6e-13, 69.84% id in 63 aa. |
| BP3133 protein network | https://string-db.org/network/257313.BP3133 | Putative LysR-family transcriptional regulator; Similar to Pseudomonas putida transcriptional activator protein NahR SW:NAHR_PSEPU (P10183) (300 aa) fasta scores: E(): 5.1e-46, 43.81% id in 299 a [...] |
| hmgA protein network | https://string-db.org/network/257313.BP3134 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. C [...] |
| fahA protein network | https://string-db.org/network/257313.BP3135 | Fumarylacetoacetase; Similar to Emericella nidulans fumarylacetoacetase Fah or FahA TR:Q00770 (EMBL:L41670) (431 aa) fasta scores: E(): 5.9e-54, 41% id in 439 aa, and to Pseudomonas aeruginosa fu [...] |
| BP3136 protein network | https://string-db.org/network/257313.BP3136 | Putative sulfatase; Similar to Haemophilus influenzae hypothetical protein HI1246 SW:YC46_HAEIN (P44135) (647 aa) fasta scores: E(): 1.1e-113, 47.61% id in 628 aa. |
| BP3137 protein network | https://string-db.org/network/257313.BP3137 | Putative two-component system sensor protein; Similar to Pseudomonas aeruginosa probable two-component sensor PA4380 TR:Q9HW22 (EMBL:AE004854) (426 aa) fasta scores: E(): 2.4e-23, 29.38% id in 43 [...] |
| BP3138 protein network | https://string-db.org/network/257313.BP3138 | Similar to Pseudomonas aeruginosa probable two-component response regulator PA4381 TR:Q9HW21 (EMBL:AE004854) (227 aa) fasta scores: E(): 8.3e-34, 47.57% id in 227 aa. |
| BP3139 protein network | https://string-db.org/network/257313.BP3139 | Putative oxidoreductase; Similar to Agrobacterium tumefaciens Agr_C_1314p TR:AAK86533 (EMBL:AE008006) (478 aa) fasta scores: E(): 3.2e-83, 49.46% id in 463 aa. |
| BP3140 protein network | https://string-db.org/network/257313.BP3140 | Hypothetical protein; Similar to central region of Streptomyces coelicolor putative acetyl/propionyl CoA carboxylase, alpha subunit SCD10.13 TR:Q9K3W3 (EMBL:AL359988) (614 aa) fasta scores: E(): [...] |
| pgm-2 protein network | https://string-db.org/network/257313.BP3141 | Phosphoglucomutase; Identical to the Bordetella bronchiseptica phosphoglucomutase Pgm TR:Q9S3V9 (EMBL:AF171632) (392 aa) fasta scores: E(): 1.1e-149, 99.23% id in 392 aa, and similar to Pseudomon [...] |
| pgi-2 protein network | https://string-db.org/network/257313.BP3142 | Similar to Homo sapiens glucose-6-phosphate isomerase Gpi TR:Q9BSK5 (EMBL:M61214) (558 aa) fasta scores: E(): 1.7e-68, 42.26% id in 504 aa, and to Escherichia coli glucose-6-phosphate isomerase P [...] |
| BP3143 protein network | https://string-db.org/network/257313.BP3143 | Putative glycosyltransferase; Similar to Pseudomonas aeruginosa WbpU TR:Q9RHD0 (EMBL:AF035937) (376 aa) fasta scores: E(): 1e-80, 62.06% id in 369 aa, and to Vibrio cholerae Orf139-23 protein TR: [...] |
| BP3144 protein network | https://string-db.org/network/257313.BP3144 | Putative glycosyltransferase; Similar to Pseudomonas aeruginosa WbpT TR:Q9RHD1 (EMBL:AF035937) (383 aa) fasta scores: E(): 7.7e-49, 43.55% id in 388 aa. |
| BP3145 protein network | https://string-db.org/network/257313.BP3145 | Putative glycosyltransferase; Similar to Yersinia enterocolitica WbcM protein WbcM TR:Q56916 (EMBL:Z47767) (358 aa) fasta scores: E(): 8e-13, 26.31% id in 361 aa, and to Rhizobium meliloti putati [...] |
| BP3146 protein network | https://string-db.org/network/257313.BP3146 | Putative asparagine synthase; Similar to Pseudomonas aeruginosa WbpS TR:Q9RHD2 (EMBL:AF035937) (627 aa) fasta scores: E(): 1.5e-123, 53.29% id in 638 aa, and to Rhizobium loti asparagine synthase [...] |
| BP3147 protein network | https://string-db.org/network/257313.BP3147 | Similar to Rhizobium meliloti putative glycosyltransferase protein SMB21250 TR:CAC49154 (EMBL:AL603644) (427 aa) fasta scores: E(): 9.2e-37, 37.46% id in 371 aa, and to Streptomyces coelicolor pu [...] |
| BP3148 protein network | https://string-db.org/network/257313.BP3148 | Putative membrane protein; Similar to Rhizobium loti virulence factor Mvin-like protein MLL5320 TR:Q98C28 (EMBL:AP003006) (526 aa) fasta scores: E(): 1.3e-13, 25.71% id in 420 aa, and to Streptom [...] |
| BP3149 protein network | https://string-db.org/network/257313.BP3149 | UDP-N-acetylglucosamine C4 epimerase; Similar to Salmonella typhi vi polysaccharide biosynthesis protein VipB or TviC or Sty4660 SW:VIPB_SALTI (Q04973) (348 aa) fasta scores: E(): 2.8e-85, 63.17% [...] |
| wbpO-2 protein network | https://string-db.org/network/257313.BP3150 | Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipA or TviB or Sty4661 SW:VIPA_SALTI (Q04972) (425 aa) fasta scores: E(): 1.1e-118, 68.72% id in 422 aa, and to Pseudomonas aer [...] |
| BP3151 protein network | https://string-db.org/network/257313.BP3151 | Probable glycosyltransferase; Similar to Burkholderia pseudomallei undecaprenol phosphate N-acetylglucosaminyl transferase TR:O69131 (EMBL:AF064070) (368 aa) fasta scores: E(): 7.8e-51, 41.12% id [...] |
| coq7 protein network | https://string-db.org/network/257313.BP3152 | Conserved hypothetical protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. |
| BP3153 protein network | https://string-db.org/network/257313.BP3153 | Similar to Pseudomonas aeruginosa hypothetical protein PAa0653 TR:O05133 (EMBL:U89892) (140 aa) fasta scores: E(): 6.9e-25, 53.57% id in 140 aa. |
| thyA protein network | https://string-db.org/network/257313.BP3154 | Putative thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydr [...] |
| folA protein network | https://string-db.org/network/257313.BP3155 | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. |
| BP3156 protein network | https://string-db.org/network/257313.BP3156 | Similar to Rhizobium meliloti putative transcriptional regulator protein SMBb20039 TR:CAC48442 (EMBL:AL603642) (474 aa) fasta scores: E(): 2.6e-54, 39.15% id in 475 aa, and to Pseudomonas aerugin [...] |
| BP3157 protein network | https://string-db.org/network/257313.BP3157 | Similar to Pseudomonas putida omega-amino acid--pyruvate aminotransferase SW:OAPT_PSEPU (P28269) (449 aa) fasta scores: E(): 3.2e-75, 47.38% id in 439 aa, and to Rhizobium loti beta-alanine-pyruv [...] |
| mmsA protein network | https://string-db.org/network/257313.BP3159 | Putative methylmalonate-semialdehyde dehydrogenase [acylating] (Pseudogene); ScanRegExp hit to PS00070, Aldehyde dehydrogenases cysteine active site. |
| BP3160 protein network | https://string-db.org/network/257313.BP3160 | Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tP SW:Y4TP_RHISN (Q53191) (313 aa) fasta scores: E(): 4e-60, 52.07% id in 313 aa. |
| BP3161 protein network | https://string-db.org/network/257313.BP3161 | Similar to Rhizobium sp probable peptide ABC transporter permease protein Y4tQ SW:Y4TQ_RHISN (Q53192) (291 aa) fasta scores: E(): 3.3e-44, 49.47% id in 283 aa, and to Bacillus firmus dipeptide tr [...] |
| BP3163 protein network | https://string-db.org/network/257313.BP3163 | Putative ABC transpoter ATP-binding protein (pseudogene); Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. |
| BP3164 protein network | https://string-db.org/network/257313.BP3164 | Transposase for IS481 element. |
| ureG protein network | https://string-db.org/network/257313.BP3166 | N-terminal region of a putative aldehyde dehydrogenase (Pseudogene); Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably ef [...] |
| ureE protein network | https://string-db.org/network/257313.BP3167A | Urease accessory protein (Pseudogene); Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. |
| ureC protein network | https://string-db.org/network/257313.BP3168 | Urease alpha subunit; Similar to Bordetella bronchiseptica urease alpha subunit UreC SW:URE1_BORBR (O08400) (571 aa) fasta scores: E(): 3.9e-217, 99.82% id in 571 aa; Belongs to the metallo-depen [...] |
| ureB protein network | https://string-db.org/network/257313.BP3169 | Urease beta subunit; Similar to Bordetella bronchiseptica urease beta subunit UreB SW:URE2_BORBR (O06707) (102 aa) fasta scores: E(): 4.1e-39, 99.02% id in 102 aa. |
| ureJ protein network | https://string-db.org/network/257313.BP3170 | Urease accessory protein; Similar to Bordetella bronchiseptica urease accessory protein UreJ TR:O06706 (EMBL:AF000579) (202 aa) fasta scores: E(): 7.6e-73, 99.5% id in 202 aa, and to Rhizobium le [...] |
| ureA protein network | https://string-db.org/network/257313.BP3171 | Urease gamma subunit; Similar to Bordetella bronchiseptica urease gamma subunit UreA SW:URE3_BORBR (O06705) (100 aa) fasta scores: E(): 2e-34, 99% id in 100 aa, and to Escherichia coli urease gam [...] |
| ureD protein network | https://string-db.org/network/257313.BP3172 | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. |
| hmrR protein network | https://string-db.org/network/257313.BP3173 | Similar to the N-terminal region of Rhizobium meliloti heavy metal dependent transcription regulator HmrR SW:HMRR_RHIME (Q9X5X4) (147 aa) fasta scores: E(): 2e-15, 61.9% id in 84 aa, and to Esche [...] |
| BP3176 protein network | https://string-db.org/network/257313.BP3176 | Similar to Pseudomonas aeruginosa probable transcriptional regulator PA2299 TR:Q9I1H6 (EMBL:AE004655) (249 aa) fasta scores: E(): 1.6e-16, 33.04% id in 227 aa. |
| BP3177 protein network | https://string-db.org/network/257313.BP3177 | Similar to Clostridium tetanomorphum methylaspartate ammonia-lyase SW:MAAL_CLOTT (Q05514) (413 aa) fasta scores: E(): 2.1e-44, 36.67% id in 409 aa. Also similar to BP0806, 40.500% identity (40.70 [...] |
| BP3178 protein network | https://string-db.org/network/257313.BP3178 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-53, 49.07% id in 324 aa. |
| BP3179 protein network | https://string-db.org/network/257313.BP3179 | Conserved hypothetical protein; Similar to Agrobacterium tumefaciens AGR_l_2924p TR:AAK90029 (EMBL:AE008346) (448 aa) fasta scores: E(): 2.3e-29, 34.33% id in 434 aa. |
| BP3180 protein network | https://string-db.org/network/257313.BP3180 | Putative membrane protein; Similar to Streptomyces coelicolor putative nitrate/nitrite transporter protein SCJ12.25c TR:Q9RI35 (EMBL:AL109989) (412 aa) fasta scores: E(): 2.4e-06, 27.6% id in 413 [...] |
| BP3181 protein network | https://string-db.org/network/257313.BP3181 | Similar to Pseudomonas aeruginosa hypothetical protein PA0586 TR:Q9I5V1 (EMBL:AE004494) (517 aa) fasta scores: E(): 2.6e-137, 66.06% id in 498 aa, and to Escherichia coli hypothetical protein Ycg [...] |
| BP3182 protein network | https://string-db.org/network/257313.BP3182 | Similar to Vibrio cholerae hypothetical protein VC1873 TR:Q9KQX4 (EMBL:AE004263) (423 aa) fasta scores: E(): 1e-79, 48.82% id in 426 aa, and to Escherichia coli hypothetical protein YeaH or B1784 [...] |
| BP3185 protein network | https://string-db.org/network/257313.BP3185 | Conserved hypothetical protein (Pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| BP3186 protein network | https://string-db.org/network/257313.BP3186 | Transposase for IS481 element. |
| BP3188 protein network | https://string-db.org/network/257313.BP3188 | HMMPfam hit to PF00106, short chain dehydrogenase; Belongs to the CoA-transferase III family. |
| BP3189 protein network | https://string-db.org/network/257313.BP3189 | Similar to Escherichia coli phenylacetate-coenzyme A ligase PaaK or B1398 SW:PAAK_ECOLI (P76085) (437 aa) fasta scores: E(): 2.2e-40, 34.97% id in 446 aa, and to Archaeoglobus fulgidus coenzyme F [...] |
| BP3190 protein network | https://string-db.org/network/257313.BP3190 | Similar to Deinococcus radiodurans transcriptional regulator, TetR family Dr2376 TR:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 3.9e-08, 27.97% id in 193 aa. |
| BP3191 protein network | https://string-db.org/network/257313.BP3191 | Putative acyl-CoA dehyrdogenase; Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase PA2552 TR:Q9I0T2 (EMBL:AE004683) (375 aa) fasta scores: E(): 7.5e-50, 40.22% id in 363 aa, and t [...] |
| BP3192 protein network | https://string-db.org/network/257313.BP3192 | Putative ABC transporter permease protein; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter, permease protein DR0282 TR:Q9RXM8 (EMBL:AE001889) (334 aa) fasta scores: E [...] |
| BP3193 protein network | https://string-db.org/network/257313.BP3193 | Putative ABC transpoter permease protein; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter, permease protein DR0281 TR:Q9RXM9 (EMBL:AE001889) (285 aa) fasta scores: E( [...] |
| BP3194 protein network | https://string-db.org/network/257313.BP3194 | Putative ABC transporter ATP-binding protein; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter, ATP-binding protein DRA0260 TR:Q9RYP9 (EMBL:AE001863) (238 aa) fasta sc [...] |
| BP3195 protein network | https://string-db.org/network/257313.BP3195 | Putative ABC transporter ATP-binding protein; Similar to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivG or B3455 or Z4825 or ECS4302 SW:LIVG_ECOLI (P2 [...] |
| BP3196 protein network | https://string-db.org/network/257313.BP3196 | Similar to Escherichia coli Leu/Ile/Val-binding protein precursor LivJ or B3460 SW:LIVJ_ECOLI (P02917) (367 aa) fasta scores: E(): 3.6e-14, 27.74% id in 364 aa. |
| BP3198 protein network | https://string-db.org/network/257313.BP3198 | ScanRegExp hit to PS00061, Short-chain dehydrogenases/reductases family signature; Belongs to the enoyl-CoA hydratase/isomerase family. |
| BP3199 protein network | https://string-db.org/network/257313.BP3199 | Similar to Sulfolobus solfataricus hypothetical protein SSO2626 TR:Q97VJ8 (EMBL:AE006858) (128 aa) fasta scores: E(): 3.4e-05, 28.15% id in 103 aa. |
| BP3201 protein network | https://string-db.org/network/257313.BP3201 | Putative thiolase (Pseudogene); GCAT in pertussis; GC(GCGCGCCTGTCG)AT. |
| BP3202 protein network | https://string-db.org/network/257313.BP3202 | Conserved hypothetical protein; Similar to Arabidopsis thaliana hypothetical 44.2 kDa protein T22A6.50 or At4G24220 TR:Q9STX2 (EMBL:AL078637) (388 aa) fasta scores: E(): 3.8e-17, 29.75% id in 373 [...] |
| BP3207 protein network | https://string-db.org/network/257313.BP3207 | Putative desaturase (pseudogene); In-frame TAG stop codon in pertussis; TGG in parapertussis and bronchiseptica. |
| rnhA protein network | https://string-db.org/network/257313.BP3211 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. |
| BP3212 protein network | https://string-db.org/network/257313.BP3212 | Similar to Pseudomonas aeruginosa hypothetical protein PA1814 TR:Q9I2T0 (EMBL:AE004608) (253 aa) fasta scores: E(): 1.3e-18, 31.47% id in 251 aa. |
| gloB protein network | https://string-db.org/network/257313.BP3213 | Probable hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. |
| BP3214 protein network | https://string-db.org/network/257313.BP3214 | Similar to Escherichia coli membrane-bound lytic murein transglycosylase D precursor MltD or DniR or B0211 SW:MLTD_ECOLI (P23931) (452 aa) fasta scores: E(): 2.4e-29, 32.05% id in 443 aa, and to [...] |
| fabI-2 protein network | https://string-db.org/network/257313.BP3215 | Similar to Escherichia coli enoyl-[acyl-carrier-protein] reductase [NADH] FabI or EnvM or B1288 or Z2512 or ECS1861 SW:FABI_ECOLI (P29132) (261 aa) fasta scores: E(): 1.1e-60, 65.21% id in 253 aa [...] |
| BP3216 protein network | https://string-db.org/network/257313.BP3216 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP3217 protein network | https://string-db.org/network/257313.BP3217 | Similar to Pseudomonas aeruginosa hypothetical protein PA1203 TR:Q9I4D5 (EMBL:AE004550) (135 aa) fasta scores: E(): 3.9e-09, 33.58% id in 134 aa. |
| BP3218 protein network | https://string-db.org/network/257313.BP3218 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA3712 TR:Q9HXS9 (EMBL:AE004790) (231 aa) fasta scores: E(): 1.7e-39, 58.4% id in 226 aa. |
| BP3219 protein network | https://string-db.org/network/257313.BP3219 | Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 8.5e-42, 41.61% id in 310 aa. |
| BP3220 protein network | https://string-db.org/network/257313.BP3220 | Transposase for IS481 element. |
| ompR protein network | https://string-db.org/network/257313.BP3222 | Hypothetical protein (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. No significant database matches. |
| BP3223 protein network | https://string-db.org/network/257313.BP3223 | Similar to Pseudomonas aeruginosa two-component sensor EnvZ or PA5199 TR:Q9HTZ0 (EMBL:AE004932) (439 aa) fasta scores: E(): 5.9e-24, 31.87% id in 480 aa, and to Bordetella pertussis, Bordetella b [...] |
| BP3224 protein network | https://string-db.org/network/257313.BP3224 | Putative cytochrome oxidase; Similar to Escherichia coli cytochrome D ubiquinol oxidase subunit II CydB SW:CYDB_ECOLI (P11027) (379 aa) fasta scores: E(): 0.022, 21.97% id in 364 aa, and to Rhizo [...] |
| BP3225 protein network | https://string-db.org/network/257313.BP3225 | Similar to Ralstonia solanacearum putative transmembrane cytochrome BD-II oxidase Rsp1242 TR:CAD18393 (EMBL:AL646083) (462 aa) fasta scores: E(): 1.7e-56, 41.14% id in 435 aa, and to Rhizobium lo [...] |
| glnS protein network | https://string-db.org/network/257313.BP3226 | Similar to Escherichia coli glutaminyl-tRNA synthetase GlnS SW:SYQ_ECOLI (P00962) (553 aa) fasta scores: E(): 9.5e-116, 53.64% id in 535 aa, and to Neisseria meningitidis glutaminyl-tRNA syntheta [...] |
| minC protein network | https://string-db.org/network/257313.BP3227 | Putative cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that ha [...] |
| minD protein network | https://string-db.org/network/257313.BP3228 | Similar to Escherichia coli septum site-determining protein MinD SW:MIND_ECOLI (P18197) (269 aa) fasta scores: E(): 4.8e-70, 73.13% id in 268 aa, and to Vibrio cholerae septum site-determining pr [...] |
| minE protein network | https://string-db.org/network/257313.BP3229 | Putative cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This [...] |
| BP3230 protein network | https://string-db.org/network/257313.BP3230 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 5.2e-17, 28.165% id in 316 aa and Acinetobac [...] |
| osmB protein network | https://string-db.org/network/257313.BP3231 | Similar to Escherichia coli osmotically inducible lipoprotein B precursor OsmB or B1283 or Z2523 or Ecs1856 SW:OSMB_ECOLI (P17873) (72 aa) fasta scores: E(): 6.7e-08, 51.47% id in 68 aa. |
| BP3234 protein network | https://string-db.org/network/257313.BP3234 | Putative ABC transport ATP-binding subunit (pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| BP3235 protein network | https://string-db.org/network/257313.BP3235 | Hypothetical protein; No significant database matches. |
| BP3237 protein network | https://string-db.org/network/257313.BP3237 | Putative binding-protein-dependent permease (pseudogene); HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component. |
| BP3238 protein network | https://string-db.org/network/257313.BP3238 | Putative glycosyl transferase; Similar to proteins involved in polysaccharide biosynthesis eg. Yersinia enterocolitica WbcL protein TR:Q56915 (EMBL:Z47767) (292 aa) fasta scores: E(): 5.7e-18, 28 [...] |
| BP3239 protein network | https://string-db.org/network/257313.BP3239 | Similar to many eg. Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SW:PTXR_PSEAE (P72131) (312 aa) fasta scores: E(): 1.1e-21, 30.69% id in 316 aa. Also similar to BP0265, 49.329 [...] |
| BP3239A protein network | https://string-db.org/network/257313.BP3239A | Putative exported protein; Similar to Neisseria meningitidis; putative periplasmic protein Nma2065 SWALL:Q9JSZ4 (EMBL:AL162758)(90 aa) fasta scores: E()3.9 45.65% id in 46 aa overlap. |
| uvrA2 protein network | https://string-db.org/network/257313.BP3240 | Putative excinuclease ABC subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex comp [...] |
| BP3241 protein network | https://string-db.org/network/257313.BP3241 | Putative chorismate-binding enzyme; Similar to Rhizobium loti Mlr3005 protein TR:Q98H70 (EMBL:AP003000) (381 aa) fasta scores: E(): 6.7e-44, 43.62% id in 353 aa, and to Klebsiella aerogenes para- [...] |
| BP3242 protein network | https://string-db.org/network/257313.BP3242 | Conserved hypothetical protein; Similar to Rhizobium loti Mlr3007 protein TR:Q98H69 (EMBL:AP003000) (220 aa) fasta scores: E(): 4.6e-18, 36.71% id in 207 aa, and to Rhizobium meliloti hypothetica [...] |
| BP3243 protein network | https://string-db.org/network/257313.BP3243 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter [...] |
| BP3244 protein network | https://string-db.org/network/257313.BP3244 | Similar to Streptomyces galilaeus putative aklaviketone reductase AknU TR:Q9L4U4 (EMBL:AF264025) (267 aa) fasta scores: E(): 7.4e-22, 40.16% id in 244 aa, and to Streptomyces peucetius daunorubic [...] |
| BP3245 protein network | https://string-db.org/network/257313.BP3245 | Putative conserved membrane protein; Similar to Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.7e-39, 40.37% id in 317 aa, and to Variovorax paradoxus [...] |
| BP3246 protein network | https://string-db.org/network/257313.BP3246 | Putative fatty acid CoA ligase; Similar to enzymes involved in secondary metabolite biosynthesis eg. Streptomyces coelicolor putative long-chain-fatty-acid-CoA ligase SC2G5.17 TR:Q9Z5A6 (EMBL:AL0 [...] |
| BP3247 protein network | https://string-db.org/network/257313.BP3247 | Putative transcriptional regulator; Similar to Klebsiella aerogenes histidine utilization repressor HutC SW:HUTC_KLEAE (P12380) (241 aa) fasta scores: E(): 5.8e-09, 25.64% id in 234 aa. |
| BP3248 protein network | https://string-db.org/network/257313.BP3248 | Similar to Escherichia coli hypothetical protein YgdL or b2812 SW:YGDL_ECOLI (Q46927) (268 aa) fasta scores: E(): 8.8e-33, 42.85% id in 273 aa, and to Neisseria meningitidis hypothetical protein [...] |
| BP3249 protein network | https://string-db.org/network/257313.BP3249 | Putative inner membrane efflux protein; Similar to Streptomyces coelicolor putative integral membrane transport protein SCI30A.30C TR:Q9S243 (EMBL:AL096811) (463 aa) fasta scores: E(): 6.1e-19, 3 [...] |
| BP3250 protein network | https://string-db.org/network/257313.BP3250 | Conserved hypothetical protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Bel [...] |
| pdxH protein network | https://string-db.org/network/257313.BP3251 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). |
| BP3252 protein network | https://string-db.org/network/257313.BP3252 | Putative monooxygenase component; Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SW:NTAB_CHEHE (P54990) (322 aa) fasta scores: E(): 8.1e-20, 38.78% id [...] |
| BP3253 protein network | https://string-db.org/network/257313.BP3253 | Putative conserved exported protein; Similar to Agrobacterium tumefaciens StrC58 Agr_c_4955p TR:AAK88449 (EMBL:AE008187) (367 aa) fasta scores: E(): 9.3e-78, 59.51% id in 368 aa, and to Caulobact [...] |
| purU-2 protein network | https://string-db.org/network/257313.BP3254 | Putative formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). |
| BP3255 protein network | https://string-db.org/network/257313.BP3255 | Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3594 TR:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 6.6e-45, 47.26% id in 292 aa, and to Bacillus subtilis als operon [...] |
| trpC protein network | https://string-db.org/network/257313.BP3261 | Transposase (Pseudogene); Inverted repeat for IS481 element; Belongs to the TrpC family. |
| trpD protein network | https://string-db.org/network/257313.BP3262 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...] |
| trpG protein network | https://string-db.org/network/257313.BP3263 | Similar to Pseudomonas putida anthranilate synthase component II TrpG SW:TRPG_PSEPU (P00901) (198 aa) fasta scores: E(): 7.8e-46, 64.73% id in 190 aa. |
| trpE protein network | https://string-db.org/network/257313.BP3264 | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first [...] |
| gph protein network | https://string-db.org/network/257313.BP3265 | Putative phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during [...] |
| rpe protein network | https://string-db.org/network/257313.BP3266 | Similar to Alcaligenes eutrophus ribulose-phosphate 3-epimerase, plasmid CbbEP or CfxE SW:RPEP_ALCEU (Q04539) (241 aa) fasta scores: E(): 1.1e-62, 69.74% id in 238 aa, and to Escherichia coli, an [...] |
| apaG protein network | https://string-db.org/network/257313.BP3267 | Similar to Pseudomonas aeruginosa hypothetical protein Pa0591 TR:Q9I5U6 (EMBL:AE004495) (126 aa) fasta scores: E(): 9e-24, 56.19% id in 121 aa, and to Escherichia coli, and ApaA protein or b0050 [...] |
| BP3268 protein network | https://string-db.org/network/257313.BP3268 | Putative membrane-bound transglycolase; Similar to Pseudomonas aeruginosa probable membrane-bound lytic murein transglycolase A Pa1222 TR:Q9I4B6 (EMBL:AE004552) (385 aa) fasta scores: E(): 8.8e-5 [...] |
| BP3269 protein network | https://string-db.org/network/257313.BP3269 | Putative monooxygenase; Similar to Pseudomonas aeruginosa probable FAD-dependent monooxygenase Pa5221 TR:Q9HTW9 (EMBL:AE004935) (405 aa) fasta scores: E(): 1.1e-33, 39.01% id in 387 aa, and to Es [...] |
| dsbC protein network | https://string-db.org/network/257313.BP3270 | Putative thiol:disulphide interchange protein (periplasmic); Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is r [...] |
| BP3271 protein network | https://string-db.org/network/257313.BP3271 | Similar to Streptomyces coelicolor putative 2-hydroxyacid dehydrogenase SCC61A.17 TR:Q9KYH6 (EMBL:AL356595) (330 aa) fasta scores: E(): 1.2e-49, 49.67% id in 308 aa, and to Bacillus subtilis D-3- [...] |
| BP3272 protein network | https://string-db.org/network/257313.BP3272 | Transposase for IS481 element. |
| ttcA protein network | https://string-db.org/network/257313.BP3273 | Conserved hypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cystei [...] |
| folB protein network | https://string-db.org/network/257313.BP3274 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. |
| BP3275 protein network | https://string-db.org/network/257313.BP3275 | Putative oxidoreductase; Similar to C-terminal portion of many eg. Salmonella typhimurium alkyl hydroperoxide reductase subunit F AhpF or stm0609 SW:AHPF_SALTY (P19480) (521 aa) fasta scores: E() [...] |
| BP3276 protein network | https://string-db.org/network/257313.BP3276 | Similar to Neisseria meningitidis hypothetical protein NMB1726 TR:Q9JY58 (EMBL:AE002523) (582 aa) fasta scores: E(): 1.1e-56, 40.9% id in 594 aa. |
| BP3277 protein network | https://string-db.org/network/257313.BP3277 | Putative enoyl-CoA hydratase; Similar to Rhizobium meliloti probable enoyl-CoA hydratase FadB1 or r00366 or smc01153 SW:ECHH_RHIME (Q52995) (257 aa) fasta scores: E(): 5.4e-62, 68.6% id in 258 aa [...] |
| BP3281 protein network | https://string-db.org/network/257313.BP3281 | Putative inner membrane ATP synthase protein; Similar to Neisseria meningitidis hypothetical protein Nmb1941 TR:Q9JXP8 (EMBL:AE002542) (117 aa) fasta scores: E(): 0.032, 32.69% id in 104 aa, and [...] |
| atpB protein network | https://string-db.org/network/257313.BP3282 | ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. |
| atpE protein network | https://string-db.org/network/257313.BP3283 | ATP synthase c chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembra [...] |
| atpF protein network | https://string-db.org/network/257313.BP3284 | ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembra [...] |
| atpH protein network | https://string-db.org/network/257313.BP3285 | ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extrame [...] |
| atpA protein network | https://string-db.org/network/257313.BP3286 | ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. |
| atpG protein network | https://string-db.org/network/257313.BP3287 | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of [...] |
| atpD protein network | https://string-db.org/network/257313.BP3288 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha [...] |
| atpC protein network | https://string-db.org/network/257313.BP3289 | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. |
| BP3290 protein network | https://string-db.org/network/257313.BP3290 | Hypothetical protein; No significant database matches. |
| hemE protein network | https://string-db.org/network/257313.BP3291 | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. |
| priA protein network | https://string-db.org/network/257313.BP3292 | Putative primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, vi [...] |
| rep protein network | https://string-db.org/network/257313.BP3293 | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA [...] |
| BP3294 protein network | https://string-db.org/network/257313.BP3294 | Transposase for IS481 element. |
| BP3295 protein network | https://string-db.org/network/257313.BP3295 | Putative peptidase; Similar to Bacillus halodurans carboxypeptidase G2 bh0352 TR:Q9KFW8 (EMBL:AP001508) (374 aa) fasta scores: E(): 1e-41, 37.46% id in 363 aa, and to Pseudomonas sp carboxypeptid [...] |
| BP3296 protein network | https://string-db.org/network/257313.BP3296 | Hypothetical protein; No significant database matches. |
| BP3298 protein network | https://string-db.org/network/257313.BP3298 | Oligopeptide transport ATP-binding protein (pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| BP3299 protein network | https://string-db.org/network/257313.BP3299 | Putative binding-protein-dependent transport permease; Similar to Agrobacterium tumefaciens strC58 Agr_pat_363p TR:AAK90628 (EMBL:AE007895) (323 aa) fasta scores: E(): 2.2e-66, 53.43% id in 320 a [...] |
| BP3300 protein network | https://string-db.org/network/257313.BP3300 | Hypothetical protein; No significant database matches. |
| BP3302 protein network | https://string-db.org/network/257313.BP3302 | Putative binding-protein-dependent transport protein (pseudogene); ScanRegExp hit to PS01040, Bacterial extracellular solute-binding proteins, family 5 signature. |
| nnrD protein network | https://string-db.org/network/257313.BP3303 | Conserved hypothetical protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimeri [...] |
| BP3304 protein network | https://string-db.org/network/257313.BP3304 | Putative enoyl-CoA hydratase; Similar to Mycobacterium tuberculosis enoyl-CoA hydratase EchA15 or Rv2679 or Mtv010.03 TR:O53232 (EMBL:AL021186) (276 aa) fasta scores: E(): 7.6e-60, 59.1% id in 26 [...] |
| BP3305 protein network | https://string-db.org/network/257313.BP3305 | Similar to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein cc0397 TR:Q9AB37 (EMBL:AE005712) (256 aa) fasta scores: E(): 4.8e-33, 46.41% id in 237 aa, and to Mus musculus perox [...] |
| BP3306 protein network | https://string-db.org/network/257313.BP3306 | Similar to many eg. Rhizobium meliloti hypothetical protein Smc02150 TR:CAC41942 (EMBL:AL591783) (336 aa) fasta scores: E(): 8.8e-66, 57.37% id in 312 aa. |
| BP3307 protein network | https://string-db.org/network/257313.BP3307 | Putative TetR-family trasncriptional regulator; Similar to many eg. Rhodococcus spNCIMB 9784. transcriptional repressor CamPR TR:AAK50621 (EMBL:AF323755) (206 aa) fasta scores: E(): 4.3e-13, 30.6 [...] |
| BP3308 protein network | https://string-db.org/network/257313.BP3308 | Putative acyl-CoA dehydrogenase; Similar to many eg. Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1631 TR:Q9I391 (EMBL:AE004590) (384 aa) fasta scores: E(): 2.1e-106, 70.6% id in 381 [...] |
| paaH protein network | https://string-db.org/network/257313.BP3311 | Putative 3-hydroxyacyl-CoA dehydrogenase (pseudogene); Inverted repeat for IS481 element. |
| BP3312 protein network | https://string-db.org/network/257313.BP3312 | Transposase for IS1002 element. |
| BP3313 protein network | https://string-db.org/network/257313.BP3313 | Transposase for IS481 element. |
| BP3314 protein network | https://string-db.org/network/257313.BP3314 | Similar to Rhizobium meliloti putative copper oxidase, possibly exported Sma1041 TR:AAK65222 (EMBL:AE007246) (170 aa) fasta scores: E(): 9.2e-17, 43.75% id in 160 aa, and to Aeromonas veronii bvS [...] |
| copA protein network | https://string-db.org/network/257313.BP3315 | Copper resitance protein; Similar to Ralstonia metallidurans CopA protein TR:Q9F3S1 (EMBL:AJ278983) (614 aa) fasta scores: E(): 1.2e-133, 59.63% id in 602 aa, and to Pseudomonas syringae copper r [...] |
| copB protein network | https://string-db.org/network/257313.BP3316 | Copper resistance protein; Similar to Pseudomonas aeruginosa copper resistance protein B precursor PcoB or Pa2064 TR:Q9I251 (EMBL:AE004633) (325 aa) fasta scores: E(): 3.3e-41, 42.76% id in 318 a [...] |
| BP3317 protein network | https://string-db.org/network/257313.BP3317 | Putative enoyl-CoA hydratase/isomerase; Similar to Mycobacterium tuberculosis probable enoyl-CoA hydratase EchA6 or Rv0905 or Mt0928 or mtcy31.33 SW:ECH6_MYCTU (Q10533) (243 aa) fasta scores: E() [...] |
| BP3319 protein network | https://string-db.org/network/257313.BP3319 | Conserved hypothetical protein (Pseudogene); HMMPfam hit to PF02515, CAIB/BAIF family. |
| BP3320 protein network | https://string-db.org/network/257313.BP3320 | Similar to Pseudomonas aeruginosa hypothetical protein Pa2602 TR:Q9I0N5 (EMBL:AE004689) (201 aa) fasta scores: E(): 2.3e-38, 55.31% id in 188 aa. |
| BP3321 protein network | https://string-db.org/network/257313.BP3321 | Putative amidase; Similar to Rhizobium meliloti putative amidase Sma1377 TR:AAK65414 (EMBL:AE007262) (471 aa) fasta scores: E(): 1.2e-38, 35.2% id in 446 aa, and to Pseudomonas putida amidase SW: [...] |
| BP3322 protein network | https://string-db.org/network/257313.BP3322 | Similar to Streptococcus pneumoniae R6 ABC transporter substrate-binding protein-branched chain amino acid transport livJ TR:AAK99463 (EMBL:AE008443) (386 aa) fasta scores: E(): 3.5e-30, 33.76% i [...] |
| BP3323 protein network | https://string-db.org/network/257313.BP3323 | Transposase for IS481 element. |
| PhhB protein network | https://string-db.org/network/257313.BP3325 | Putative outer membrane protein (pseudogene); HMMPfam hit to PF00691, OmpA family. |
| BP3326 protein network | https://string-db.org/network/257313.BP3326 | Putative inner membrane protein; No significant database matches. |
| BP3327 protein network | https://string-db.org/network/257313.BP3327 | Putative nucleotidyl transferase; Similar to many eg. Neisseria meningitidis putative sugar-phosphate nucleotidyl transferase nma0615 TR:Q9JVZ0 (EMBL:AL162753) (231 aa) fasta scores: E(): 2.4e-43 [...] |
| BP3328 protein network | https://string-db.org/network/257313.BP3328 | Conserved hypothetical protein; Similar to many eg. Pseudomonas aeruginosa hypothetical protein Pa0596 TR:Q9I5U1 (EMBL:AE004496) (338 aa) fasta scores: E(): 1.9e-52, 45.85% id in 338 aa. |
| lptD protein network | https://string-db.org/network/257313.BP3329 | Putative outer membrane (permeability) protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. |
| surA protein network | https://string-db.org/network/257313.BP3330 | Putative peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientat [...] |
| ksgA protein network | https://string-db.org/network/257313.BP3331 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...] |
| garK protein network | https://string-db.org/network/257313.BP3332 | Glycerate kinase; Similar to Escherichia coli glycerate kinase 2 GarK or b3124 SW:GRK2_ECOLI (P23524) (381 aa) fasta scores: E(): 2.8e-57, 49.6% id in 379 aa, and to Pseudomonas aeruginosa hypoth [...] |
| pykA protein network | https://string-db.org/network/257313.BP3333 | Pyruvate kinase; Similar to Escherichia coli pyruvate kinase II PykA or b1854 SW:KPY2_ECOLI (P21599) (479 aa) fasta scores: E(): 2.1e-96, 59.32% id in 477 aa. |
| BP3334 protein network | https://string-db.org/network/257313.BP3334 | Similar to Pseudomonas aeruginosa hypothetical protein Pa5478 TR:Q9HT92 (EMBL:AE004960) (409 aa) fasta scores: E(): 6e-116, 78.18% id in 408 aa. C-terminus similar to Bacillus subtilis spore matu [...] |
| BP3339 protein network | https://string-db.org/network/257313.BP3339 | Conserved hypothetical protein (pseudogene); 97 bp deletion in pertussis relative to parapertussis and bronchiseptica. |
| BP3340 protein network | https://string-db.org/network/257313.BP3340 | Similar to Rhizobium meliloti putative iron ABC transporter permease protein smb21430 TR:CAC49658 (EMBL:AL603646) (356 aa) fasta scores: E(): 4.7e-59, 52.41% id in 332 aa, and to Corynebacterium [...] |
| cpoB protein network | https://string-db.org/network/257313.BP3341 | Putative periplasmic protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. |
| pal protein network | https://string-db.org/network/257313.BP3342 | Putative peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane i [...] |
| tolB protein network | https://string-db.org/network/257313.BP3343 | Putative TolB-like translocation protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integr [...] |
| BP3344 protein network | https://string-db.org/network/257313.BP3344 | Proline-rich inner membrane protein; No significant database matches. Contains possible coiled-coil region at residues 131-202. |
| BP3345 protein network | https://string-db.org/network/257313.BP3345 | Putative TolR-like translocation protein; Similar to Escherichia coli TolR protein or b0738 or z0906 or ecs0773 SW:TOLR_ECOLI (P05829) (142 aa) fasta scores: E(): 9.1e-09, 33.33% id in 138 aa. |
| tolQ protein network | https://string-db.org/network/257313.BP3346 | Putative TolQ-like translocation protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integr [...] |
| BP3347 protein network | https://string-db.org/network/257313.BP3347 | Conserved hypothetical protein; Similar to many eg. Pasteurella multocida hypothetical protein Pm0971 TR:Q9CM67 (EMBL:AE006136) (136 aa) fasta scores: E(): 1.4e-19, 43.9% id in 123 aa. |
| proS protein network | https://string-db.org/network/257313.BP3348 | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...] |
| nudH protein network | https://string-db.org/network/257313.BP3349 | Putative Nudix hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can [...] |
| BP3350 protein network | https://string-db.org/network/257313.BP3350 | Two component response regulator; Similar to Salmonella typhimurium transcriptional regulatory protein TctD TR:AAL21670 (EMBL:M28368) (224 aa) fasta scores: E(): 1.1e-37, 50.68% id in 219 aa, and [...] |
| BP3351 protein network | https://string-db.org/network/257313.BP3351 | N-terminal region of a two component sensor kinase (partial); Partial CDS. This CDS is the N-terminal region of BP0501 which was disrupted by the integration of a prophage. This CDS lacks a stop [...] |
| BP3352 protein network | https://string-db.org/network/257313.BP3352 | Phage-related conserved hypothetical protein; Similar to Salmonella typhimurium gifsy-2 prophage stm1053 SWALL:Q8ZQ78 (EMBL:AE008745) (208 aa) fasta scores: E(): 6.8e-16, 38.83% id in 188 aa, and [...] |
| BP3353 protein network | https://string-db.org/network/257313.BP3353 | Putative phage-related hypothetical protein (partial); No significant database matches. |
| BP3354 protein network | https://string-db.org/network/257313.BP3354 | Phage-related hypothetical protein; No significant database matches. |
| BP3355 protein network | https://string-db.org/network/257313.BP3355 | Phage-related conserved hypothetical protein; Weakly similar to Bacteriophage N15 protein gp55 precursor 55 SW:VG55_BPN15 (O64363) (181 aa) fasta scores: E(): 0.00017, 31.76% id in 170 aa. Also s [...] |
| BP3356 protein network | https://string-db.org/network/257313.BP3356 | Similar to Serratia marcescens phage lysozyme RegB SWALL:Q54423 (EMBL:U31763) (179 aa) fasta scores: E(): 0.05, 30.76% id in 169 aa, and to Bacteriophage phi-Ea1h lysozyme LyZ SWALL:Q9FZS7 (EMBL: [...] |
| BP3357 protein network | https://string-db.org/network/257313.BP3357 | Phage-related conserved hypothetical protein; Weakly similar to Serratia marcescens extracellular secretory protein NucE TR:Q54418 (EMBL:U11698) (89 aa) fasta scores: E(): 0.26, 31.08% id in 74 a [...] |
| BP3358 protein network | https://string-db.org/network/257313.BP3358 | Phage-related hypothetical protein; No significant database matches. |
| BP3359 protein network | https://string-db.org/network/257313.BP3359 | Phage-related hypothetical protein; No significant database matches. |
| BP3361 protein network | https://string-db.org/network/257313.BP3361 | Phage-related hypothetical protein; No significant database matches. |
| BP3362 protein network | https://string-db.org/network/257313.BP3362 | Phage-related conserved hypothetical protein; Similar to Bacteriophage D3 Orf26 TR:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.5e-23, 26.57% id in 700 aa, and to Bacteriophage HK022 GP24 [...] |
| BP3363 protein network | https://string-db.org/network/257313.BP3363 | Phage-related conserved hypothetical protein; Similar to Bacteriophage D3 Orf25 TR:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.0012, 32.03% id in 128 aa. |
| BP3364 protein network | https://string-db.org/network/257313.BP3364 | Phage-related conserved hypothetical protein; Similar to Bacteriophage D3 Orf22 TR:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.41, 23.12% id in 173 aa. |
| BP3365 protein network | https://string-db.org/network/257313.BP3365 | Phage-related conserved hypothetical protein; Similar to Bacteriophage D3 Orf21 TR:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 9.9e-05, 34.31% id in 102 aa, and weakly similar to the C-ter [...] |
| BP3366 protein network | https://string-db.org/network/257313.BP3366 | Similar to Bacteriophage lambda minor tail protein precursor H SW:VMTH_LAMBD (P03736) (853 aa) fasta scores: E(): 1.3e-26, 26.31% id in 859 aa, and to Escherichia coli O157:H7 putative tail lengt [...] |
| BP3367 protein network | https://string-db.org/network/257313.BP3367 | Similar to Yersinia pestis hypothetical phage protein Ypo2118 ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.2e-08, 52.05% id in 73 aa. |
| BP3368 protein network | https://string-db.org/network/257313.BP3368 | Similar to Yersinia pestis hypothetical phage protein Ypo2117 ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa. |
| BP3369 protein network | https://string-db.org/network/257313.BP3369 | Similar to Ralstonia solanacearum hypothetical protein rsc1689 rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa. |
| BP3370 protein network | https://string-db.org/network/257313.BP3370 | Similar to Escherichia coli O157:H7 hypothetical protein ECS3504 TR:BAB36927 (EMBL:AP002562) (188 aa) fasta scores: E(): 2.5e-14, 37.5% id in 144 aa. C-terminal region is similar to bacteriophage [...] |
| BP3371 protein network | https://string-db.org/network/257313.BP3371 | Similar to Rhizobium loti hypothetical protein MLR8015 TR:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 0.0066, 30.43% id in 115 aa. |
| BP3372 protein network | https://string-db.org/network/257313.BP3372 | Weakly similar to Yersinia pestis hypothetical phage protein Ypo2114 ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa. |
| BP3373 protein network | https://string-db.org/network/257313.BP3373 | Similar to Rhizobium loti hypothetical protein MLR8012 TR:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 0.25, 29.26% id in 123 aa. |
| BP3374 protein network | https://string-db.org/network/257313.BP3374 | Phage-related hypothetical protein; No significant database matches. |
| BP3375 protein network | https://string-db.org/network/257313.BP3375 | Phage-related conserved hypothetical protein; No significant database matches. |
| BP3376 protein network | https://string-db.org/network/257313.BP3376 | Phage-related hypothetical protein; No significant database matches. |
| BP3380 protein network | https://string-db.org/network/257313.BP3380 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP3381 protein network | https://string-db.org/network/257313.BP3381 | Phage-related hypothetical protein; No significant database matches. |
| BP3382 protein network | https://string-db.org/network/257313.BP3382 | Similar to Yersinia pestis hypothetical phage protein Ypo2108 ypo2108 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 4.5e-51, 43.61% id in 360 aa, and to Deinococcus radiodurans head mo [...] |
| BP3383 protein network | https://string-db.org/network/257313.BP3383 | Phage-related conserved hypothetical protein; Poor database matches. Similar to the N-terminal region of bacteriophage MB78 protein Gp62 TR:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 1.8e-3 [...] |
| BP3384 protein network | https://string-db.org/network/257313.BP3384 | Putative phage terminase; Similar to Bacillus subtilis PBSX phage terminase large subunit XtmB SW:XTMB_BACSU (P39786) (433 aa) fasta scores: E(): 0.39, 21.1% id in 417 aa, and to Yersinia pestis [...] |
| BP3385 protein network | https://string-db.org/network/257313.BP3385 | Similar to Lactococcus lactis bacteriophage Tuc2009 hypothetical protein TR:Q9AYX3 (EMBL:AF109874) (153 aa) fasta scores: E(): 1.9e-11, 44.11% id in 102 aa, and to Bacillus halodurans hypothetica [...] |
| BP3386 protein network | https://string-db.org/network/257313.BP3386 | Transposase for IS481 element. |
| BP3388 protein network | https://string-db.org/network/257313.BP3388 | Phage-related hypothetical protein (pseudogene); This CDS is disrupted by the insertion of IS481 element. No significant database matches. |
| BP3389 protein network | https://string-db.org/network/257313.BP3389 | Phage-related hypothetical protein; No significant database matches. |
| BP3390 protein network | https://string-db.org/network/257313.BP3390 | Putative phage repressor protein; No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of bacteriophage D3 repressor protein cI SW:RPC1_BPD3 (Q37 [...] |
| BP3391 protein network | https://string-db.org/network/257313.BP3391 | Conserved hypothetical protein; Poor database matches. Similar to Neisseria meningitidis hypothetical protein NNMB2100 TR:Q9JXD3 (EMBL:AE002559) (77 aa) fasta scores: E(): 2.4, 35.29% id in 51 aa [...] |
| BP3392 protein network | https://string-db.org/network/257313.BP3392 | Transposase for IS481 element. |
| BP3393 protein network | https://string-db.org/network/257313.BP3393 | Similar to Rhizobium meliloti putative transmembrane protein smc02882 TR:CAC41594 (EMBL:AL591782) (244 aa) fasta scores: E(): 0.09, 24.64% id in 211 aa. |
| BP3394 protein network | https://string-db.org/network/257313.BP3394 | Conserved hypothetical protein; Similar to Ralstonia solanacearum putative thioredoxin-like protein Rsc0067 or Rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 7.1e-20, 51.12% id [...] |
| BP3395 protein network | https://string-db.org/network/257313.BP3395 | Similar to Escherichia coli putative ATP-dependent RNA helicase RhlE or b0797 SW:RHLE_ECOLI (P25888) (454 aa) fasta scores: E(): 9e-72, 50% id in 456 aa; Belongs to the DEAD box helicase family. |
| BP3396 protein network | https://string-db.org/network/257313.BP3396 | Putative conserved inner membrane protein; Similar to Streptomyces avermitilis hypothetical 10.3 kDa protein TR:BAB69324 (EMBL:AB070950) (97 aa) fasta scores: E(): 0.00047, 33.67% id in 98 aa, an [...] |
| BP3397 protein network | https://string-db.org/network/257313.BP3397 | Similar to Rhodobacter sphaeroides putative membrane protein TR:Q9KX17 (EMBL:Y09560) (235 aa) fasta scores: E(): 1.5e-15, 28.94% id in 228 aa. |
| ilvE protein network | https://string-db.org/network/257313.BP3398 | Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. |
| BP3399 protein network | https://string-db.org/network/257313.BP3399 | Similar to Neisseria meningitidis hypothetical protein NMA0721 TR:Q9JVS1 (EMBL:AL162754) (67 aa) fasta scores: E(): 6.4e-07, 48.27% id in 58 aa. |
| BP3400 protein network | https://string-db.org/network/257313.BP3400 | Hypothetical protein; No significant database matches. |
| BP3401 protein network | https://string-db.org/network/257313.BP3401 | Similar to Escherichia coli hypothetical protein YheT or b3353 SW:YHET_ECOLI (P45524) (340 aa) fasta scores: E(): 1.1e-31, 36.8% id in 269 aa. |
| BP3402 protein network | https://string-db.org/network/257313.BP3402 | Putative exported protein; Similar to Vibrio cholerae hypothetical protein Vc2164 TR:Q9KQ40 (EMBL:AE004288) (484 aa) fasta scores: E(): 8.4e-33, 31.91% id in 495 aa. |
| BP3403 protein network | https://string-db.org/network/257313.BP3403 | Similar to Bacillus subtilis UTP--glucose-1-phosphate uridylyltransferase GtaB SW:GTAB_BACSU (Q05852) (292 aa) fasta scores: E(): 1.3e-50, 54.68% id in 267 aa. |
| BP3404 protein network | https://string-db.org/network/257313.BP3404 | Putative inner membrane protein; Weakly similar to Streptomyces coelicolor putative integral membrane protein 2SCG58.15 TR:Q9FC98 (EMBL:AL391017) (316 aa) fasta scores: E(): 6.4e-07, 24.11% id in [...] |
| ompQ protein network | https://string-db.org/network/257313.BP3405 | Outer membrane porin protein OmpQ; Previously described as Bordetella pertussis OmpQ TR:Q45342 (EMBL:U16266) (364 aa) fasta scores: E(): 1.5e-148, 99.72% id in 364 aa. Similar to Bordetella pertu [...] |
| BP3406 protein network | https://string-db.org/network/257313.BP3406 | Pseudogene. Transposase for IS1002 element. Disrupted by the insertion of IS481 element. |
| BP3409 protein network | https://string-db.org/network/257313.BP3409 | Hypothetical protein; No significant database matches. |
| BP3410 protein network | https://string-db.org/network/257313.BP3410 | Putative inner membrane protein; Similar to Treponema pallidum conserved hypothetical integral membrane protein tp1034 TR:O83997 (EMBL:AE001271) (341 aa) fasta scores: E(): 0.00026, 26.87% id in [...] |
| BP3411 protein network | https://string-db.org/network/257313.BP3411 | Putative Xaa-Pro aminopeptidase; Similar to Pseudomonas aeruginosa aminopeptidase P PepP or pa5224 TR:Q9HTW6 (EMBL:AE004935) (444 aa) fasta scores: E(): 7.3e-84, 51.14% id in 436 aa, and to Esche [...] |
| BP3412 protein network | https://string-db.org/network/257313.BP3412 | Putative inner membrane protein; No significant database matches. |
| BP3413 protein network | https://string-db.org/network/257313.BP3413 | Putative monooxygenase; Similar to Pseudomonas aeruginosa UbiH protein or pa5223 TR:Q9HTW7 (EMBL:AE004935) (394 aa) fasta scores: E(): 1.1e-26, 37.34% id in 399 aa, and to Escherichia coli 2-octa [...] |
| dusB protein network | https://string-db.org/network/257313.BP3414 | Conserved hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines [...] |
| fis protein network | https://string-db.org/network/257313.BP3415 | DNA-binding protein; Similar to Escherichia coli, DNA-binding protein Fis or b3261 or z4621 or ecs4133 or stm3385 or sty3565 SW:FIS_ECOLI (P11028) (98 aa) fasta scores: E(): 1.9e-07, 40.9% id in [...] |
| purH protein network | https://string-db.org/network/257313.BP3416 | Similar to Escherichia coli bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase PurH or b4006 SW:PUR9_ECOLI (P15639) (529 aa) fasta [...] |
| ruvC protein network | https://string-db.org/network/257313.BP3417 | Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands [...] |
| ruvA protein network | https://string-db.org/network/257313.BP3418 | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exch [...] |
| BP3419 protein network | https://string-db.org/network/257313.BP3419 | Conserved hypothetical protein; Similar to many proposed oxidoreductases eg. Caulobacter crescentus NADH-ubiquinone oxidoreductase 39 kDa subunit precursor cc3604 TR:Q9A2G1 (EMBL:AE006018) (319 a [...] |
| BP3420 protein network | https://string-db.org/network/257313.BP3420 | Putative serine/threonine dehydratase; Similar to Mus musculus serine racemase Srr TR:Q9QZX7 (EMBL:AF148321) (339 aa) fasta scores: E(): 1.7e-41, 42.85% id in 315 aa, and to Escherichia coli thre [...] |
| ruvB protein network | https://string-db.org/network/257313.BP3421 | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exch [...] |
| BP3422 protein network | https://string-db.org/network/257313.BP3422 | Similar to Escherichia coli ATP-dependent DNA helicase RecQ or b3822 SW:RECQ_ECOLI (P15043) (607 aa) fasta scores: E(): 2.3e-87, 45.07% id in 599 aa; putative ATP-dependent DNA helicase. |
| BP3423 protein network | https://string-db.org/network/257313.BP3423 | Transposase for IS481 element. |
| BP3425 protein network | https://string-db.org/network/257313.BP3425 | Putative exported protein (pseudogene); Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. |
| BP3426 protein network | https://string-db.org/network/257313.BP3426 | Putative amidase; Similar to Mycobacterium smegmatis nicotinamidase/pyrazinamidase PzaA TR:Q9ZHK8 (EMBL:AF058285) (468 aa) fasta scores: E(): 1.4e-42, 37.21% id in 481 aa, and to Pseudomonas puti [...] |
| BP3427 protein network | https://string-db.org/network/257313.BP3427 | Putative branched-chain amino acid binding protein (partial); Partial CDS. May be disrupted by a recombination event. Upstream region deleted relative to B. parapertussis and B. bronchiseptica. S [...] |
| BP3428 protein network | https://string-db.org/network/257313.BP3428 | Putative branched-chain amino acid transport permease (partial); Partial CDS. Disrupted by a recombination event. Upstream region deleted relative to B. parapertussis and B. bronchiseptica. Simil [...] |
| BP3429 protein network | https://string-db.org/network/257313.BP3429 | Similar to Streptococcus pneumoniae branched-chain amino acid ABC transporter permease protein sp0750 TR:Q97RP9 (EMBL:AE007382) (289 aa) fasta scores: E(): 1.4e-27, 33.56% id in 286 aa, and to Ps [...] |
| BP3430 protein network | https://string-db.org/network/257313.BP3430 | Similar to many predicted transporters eg. Rhizobium meliloti putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein smc02357 TR:CAC47163 (EMBL:AL591791) ( [...] |
| BP3431 protein network | https://string-db.org/network/257313.BP3431 | Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter, ATP-binding protein Dra0260 TR:Q9RYP9 (EMBL:AE001863) (238 aa) fasta scores: E(): 6.1e-27, 41.35% id in 237 aa, and t [...] |
| cysI protein network | https://string-db.org/network/257313.BP3432 | Similar to Pseudomonas aeruginosa sulfite reductase CysI TR:O31037 (EMBL:AF026066) (552 aa) fasta scores: E(): 1.5e-133, 64.31% id in 566 aa. |
| BP3433 protein network | https://string-db.org/network/257313.BP3433 | Similar to Pseudomonas aeruginosa hypothetical protein PA1837 TR:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 1.4e-15, 37.34% id in 158 aa, and to Caulobacter crescentus hypothetical protei [...] |
| BP3434 protein network | https://string-db.org/network/257313.BP3434 | Putative exported protein; Similar to Pasteurella haemolytica outer membrane lipoprotein 3 precursor PlpC SW:PLPC_PASHA (Q08870) (263 aa) fasta scores: E(): 1.2e-34, 41.5% id in 265 aa, and to Rh [...] |
| BP3435 protein network | https://string-db.org/network/257313.BP3435 | Similar to Arabidopsis thaliana hypothetical protein MZE19.4 TR:Q9LHE6 (EMBL:AP002050) (450 aa) fasta scores: E(): 1.2e-14, 31.69% id in 426 aa. |
| BP3436 protein network | https://string-db.org/network/257313.BP3436 | Transposase for IS481 element. |
| BP3437 protein network | https://string-db.org/network/257313.BP3437 | Conserved hypothetical protein; Similar to Neisseria meningitidis CinA-related protein NMB2128 TR:Q9JXC2 (EMBL:AE002560) (266 aa) fasta scores: E(): 6.9e-42, 51.66% id in 240 aa, and to the N-ter [...] |
| BP3438 protein network | https://string-db.org/network/257313.BP3438 | IclR family transcriptional regulator; Similar to Escherichia coli acetate operon repressor IclR SW:ICLR_ECOLI (P16528) (274 aa) fasta scores: E(): 1e-19, 30.76% id in 273 aa, and to Streptomyces [...] |
| dnt protein network | https://string-db.org/network/257313.BP3439 | Dermonecrotic toxin; Previously sequenced as Bordetella pertussis dermonecrotic toxin Dnt TR:Q45336 (EMBL:U10527) (1451 aa) fasta scores: E(): 0, 100% id in 1451 aa. Almost identical to Bordetell [...] |
| BP3440 protein network | https://string-db.org/network/257313.BP3440 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMB20025 TR:CAC48428 (EMBL:AL603642) (325 aa) fasta scores: E(): 9.8e-62, 54.4% id in 318 aa, and to Agrobacterium tu [...] |
| BP3441 protein network | https://string-db.org/network/257313.BP3441 | Conserved hypothetical protein; Similar to Alcaligenes eutrophus granule-associated protein PhaP TR:Q44013 (EMBL:X85729) (192 aa) fasta scores: E(): 5.6e-23, 44.79% id in 192 aa. Weakly similar t [...] |
| pyrD protein network | https://string-db.org/network/257313.BP3442 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. |
| bpt protein network | https://string-db.org/network/257313.BP3443 | Conserved hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal as [...] |
| aat protein network | https://string-db.org/network/257313.BP3445 | Putative leucyl/phenylalanyl-tRNA--protein transferase (Pseudogene); (GC)4 in pertussis; (GC)5 in parapertussis and bronchiseptica. |
| BP3446 protein network | https://string-db.org/network/257313.BP3446 | Similar to Vibrio cholerae LysR family transcriptional regulator VCA0982 TR:Q9KKW8 (EMBL:AE004424) (299 aa) fasta scores: E(): 2.6e-40, 42.25% id in 284 aa, and to Rhizobium loti transcriptional [...] |
| BP3447 protein network | https://string-db.org/network/257313.BP3447 | Putative membrane protein; Similar to Bacillus halodurans hypothetical protein YfiD TR:Q9RC47 (EMBL:AB024562) (129 aa) fasta scores: E(): 6.6e-06, 36.44% id in 118 aa, and to Bacillus subtilis hy [...] |
| BP3448 protein network | https://string-db.org/network/257313.BP3448 | Similar to Ralstonia solanacearum hypothetical protein Rsc0562 or Rs04903 SWALL:Q8Y1X5 (EMBL:AL646060) (195 aa) fasta scores: E(): 2.6e-19, 37.68% id in 207 aa. |
| BP3449 protein network | https://string-db.org/network/257313.BP3449 | Putative membrane protein; Poor database matches. C-terminus is similar to similar to Rhizobium meliloti putative signal peptide protein SMC00809 TR:Q92RU0 (EMBL:AL591784) (88 aa) fasta scores: E [...] |
| BP3451 protein network | https://string-db.org/network/257313.BP3451 | Pseudogene. This CDS is disrupted by the insertion of IS481 element. This CDS is the C-terminal region of BP3104. Similar to C-terminal regions of Escherichia coli homoserine/homoserine lactone e [...] |
| BP3452 protein network | https://string-db.org/network/257313.BP3452 | Similar to Pseudomonas aeruginosa probable transcriptional regulator PA0797 TR:Q9I5E1 (EMBL:AE004515) (240 aa) fasta scores: E(): 5.1e-09, 27.42% id in 237 aa, and to Streptomyces seoulensis puta [...] |
| BP3453 protein network | https://string-db.org/network/257313.BP3453 | Similar to Escherichia coli acetolactate synthase isozyme II large subunit IlvG SW:ILVG_ECOLI (P00892) (548 aa) fasta scores: E(): 3e-50, 31.28% id in 537 aa, and to Pseudomonas aeruginosa probab [...] |
| BP3454 protein network | https://string-db.org/network/257313.BP3454 | Putative lipoprotein; Similar to Comamonas testosteroni hypothetical protein OrfJ TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.4e-43, 44.41% id in 322 aa, and to Rhizobium meliloti hyp [...] |
| BP3455 protein network | https://string-db.org/network/257313.BP3455 | Putative taurine dioxygenase; Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD SW:TAUD_ECOLI (P37610) (282 aa) fasta scores: E(): 5.4e-31, 35.08% id in 285 aa, a [...] |
| maeB-3 protein network | https://string-db.org/network/257313.BP3456 | Similar to Escherichia coli NADP-dependent malic enzyme MaeB SW:MAO2_ECOLI (P76558) (759 aa) fasta scores: E(): 1.6e-175, 60.07% id in 759 aa, and to Rhizobium meliloti NAD-dependent malic enzyme [...] |
| BP3457 protein network | https://string-db.org/network/257313.BP3457 | LysR family regulatory protein; Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ SW:PCAQ_AGRTU (P52668) (311 aa) fasta scores: E(): 4.6e-15, 28.8% id in 302 aa, and [...] |
| BP3458 protein network | https://string-db.org/network/257313.BP3458 | Binding-protein-dependent transport systems inner membrane component; Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores [...] |
| BP3459 protein network | https://string-db.org/network/257313.BP3459 | Binding-protein-dependent transport systems inner membrane component; Similar to Escherichia coli dipeptide transport system permease protein DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E( [...] |
| BP3460 protein network | https://string-db.org/network/257313.BP3460 | Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YliA SW:YLIA_ECOLI (P75796) (629 aa) fasta scores: E(): 9.7e-133, 62.29% id in 602 aa. C-terminal region is similar to [...] |
| BP3462 protein network | https://string-db.org/network/257313.BP3462 | Bacterial extracellular solute-binding protein (pseudogene); Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. |
| BP3463 protein network | https://string-db.org/network/257313.BP3463 | LysR family regulatory protein; Similar to Escherichia coli cyn operon transcriptional activator CynR SW:CYNR_ECOLI (P27111) (311 aa) fasta scores: E(): 7.6e-13, 25.08% id in 295 aa, and to Rhizo [...] |
| BP3464 protein network | https://string-db.org/network/257313.BP3464 | Putative exported protein; Poor database matches. C-terminus is similar to an internal region of Bordetella bronchiseptica putative membrane protein BbLPS1.18c TR:O87991 (EMBL:AJ007747) (340 aa) [...] |
| BP3465 protein network | https://string-db.org/network/257313.BP3465 | Similar to Rhizobium meliloti hypothetical protein SMC01149 TR:CAC41808 (EMBL:AL591783) (160 aa) fasta scores: E(): 3.7e-20, 40.76% id in 157 aa, and to Caulobacter crescentus hypothetical protei [...] |
| BP3466 protein network | https://string-db.org/network/257313.BP3466 | Putative ArsR family transcriptional regulator; Similar to Rhizobium loti transcriptional regulator MLL3772 TR:Q98FH5 (EMBL:AP003002) (111 aa) fasta scores: E(): 1.5e-16, 47.27% id in 110 aa, and [...] |
| BP3467 protein network | https://string-db.org/network/257313.BP3467 | Putative exported protein; Similar to Escherichia coli suppressor of OmpF assembly mutants, outer membrane protein AsmA SW:ASMA_ECOLI (P28249) (617 aa) fasta scores: E(): 0.0063, 23.79% id in 395 [...] |
| BP3468 protein network | https://string-db.org/network/257313.BP3468 | Hypothetical protein; Poor database matches. Similar to the N-terminal regions of Streptomyces coelicolor hypothetical protein SCG20A.02 TR:Q9K3N8 (EMBL:AL360055) (275 aa) fasta scores: E(): 0.02 [...] |
| BP3469 protein network | https://string-db.org/network/257313.BP3469 | Putative transport protein; Similar to Acinetobacter calcoaceticus benzoate membrane transport protein BenE SW:BENE_ACICA (P07775) (394 aa) fasta scores: E(): 1.1e-45, 40.21% id in 373 aa, and to [...] |
| fdx-3 protein network | https://string-db.org/network/257313.BP3470 | Ferredoxin; Similar to Chromatium vinosum ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 1.2e-17, 61.25% id in 80 aa, and to Pseudomonas aeruginosa ferredoxin PA0362 TR:Q9I6D2 (E [...] |
| coaD protein network | https://string-db.org/network/257313.BP3471 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...] |
| BP3472 protein network | https://string-db.org/network/257313.BP3472 | Conserved hypothetical protein; Similar to Escherichia coli putative methylase YhhF SW:YHHF_ECOLI (P10120) (198 aa) fasta scores: E(): 4.3e-24, 44.94% id in 198 aa, and to Salmonella enterica sub [...] |
| ftsY protein network | https://string-db.org/network/257313.BP3473 | Cell division protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle [...] |
| BP3476 protein network | https://string-db.org/network/257313.BP3476 | Conserved hypothetical protein (pseudogene); In-frame TGA stop codon in pertussis; TGG in parapertussis and bronchiseptica. |
| BP3477 protein network | https://string-db.org/network/257313.BP3477 | Binding-protein-dependent transport systems inner membrane component; Similar to Escherichia coli phosphonates transport system permease protein PhnE SW:PHNE_ECOLI (P16683) (276 aa) fasta scores: [...] |
| BP3481 protein network | https://string-db.org/network/257313.BP3481 | Putative exported protein; Weakly similar to Escherichia coli phosphonates-binding periplasmic protein precursor PhnD SW:PHND_ECOLI (P16682) (338 aa) fasta scores: E(): 6.7e-09, 23.91% id in 276 [...] |
| BP3482 protein network | https://string-db.org/network/257313.BP3482 | Putative transcriptional regulator; Similar to Streptomyces coelicolor glycerol operon regulatory protein GylR SW:GYLR_STRCO (P15360) (254 aa) fasta scores: E(): 3.9e-09, 26.74% id in 258 aa, and [...] |
| BP3483 protein network | https://string-db.org/network/257313.BP3483 | Haloacid dehalogenase-like hydrolase; Poor database matches. Weakly similar to Mycobacterium leprae hypothetical protein ML0089 TR:Q9CDB9 (EMBL:AL583917) (281 aa) fasta scores: E(): 2.2, 25.44% i [...] |
| ribB-2 protein network | https://string-db.org/network/257313.BP3484 | Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family [...] |
| ribH protein network | https://string-db.org/network/257313.BP3485 | Putative 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-ph [...] |
| nusB protein network | https://string-db.org/network/257313.BP3486 | N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of t [...] |
| thiL protein network | https://string-db.org/network/257313.BP3487 | Putative thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs t [...] |
| BP3488 protein network | https://string-db.org/network/257313.BP3488 | Putative phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). |
| BP3489 protein network | https://string-db.org/network/257313.BP3489 | Similar to Enterobacter agglomerans hypothetical protein SW:YGAD_ENTAG (P51967) (164 aa) fasta scores: E(): 7.4e-22, 50.6% id in 166 aa, and to the C-terminal region of Streptococcus pneumoniae p [...] |
| pyrF protein network | https://string-db.org/network/257313.BP3490 | Similar to Thermus aquaticus orotidine 5'-phosphate decarboxylase PyrF SW:DCOP_THETH (P96076) (241 aa) fasta scores: E(): 1e-22, 39.92% id in 258 aa, and to Halobacterium salinarum orotidine-5'-m [...] |
| ndh protein network | https://string-db.org/network/257313.BP3491 | Similar to Escherichia coli NADH dehydrogenase Ndh SW:DHNA_ECOLI (P00393) (433 aa) fasta scores: E(): 1.6e-60, 43.18% id in 433 aa, and to Pseudomonas fluorescens NADH dehydrogenase II Ndh TR:Q9K [...] |
| dgkA protein network | https://string-db.org/network/257313.BP3492 | Putative diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. |
| brkB protein network | https://string-db.org/network/257313.BP3493 | Similar to Bordetella pertussis serum resistance protein BrkB TR:Q45339 (EMBL:U12276) (296 aa) fasta scores: E(): 3.8e-111, 100% id in 296 aa. Similar to the N-terminal region of Rhizobium loti h [...] |
| brkA protein network | https://string-db.org/network/257313.BP3494 | Serum resistance protein; Inhibits the classical pathway of complement activation and prevents accumulation of deposited C4. |
| cpn60 protein network | https://string-db.org/network/257313.BP3495 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. |
| cpn10 protein network | https://string-db.org/network/257313.BP3496 | 10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. |
| BP3497 protein network | https://string-db.org/network/257313.BP3497 | Hypothetical protein; No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Agrobacterium tumefaciens AGR_L_563p TR:AAK88851 (EMBL:AE008228) (2 [...] |
| BP3498 protein network | https://string-db.org/network/257313.BP3498 | Conserved hypothetical protein; Similar to Bordetella bronchiseptica arylmalonate decarboxylase SW:AMDA_BORBR (Q05115) (240 aa) fasta scores: E(): 3.9e-06, 27.31% id in 216 aa, and to Pyrococcus [...] |
| BP3499 protein network | https://string-db.org/network/257313.BP3499 | Hypothetical protein; No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Agrobacterium tumefaciens AGR_L_563p TR:AAK88851 (EMBL:AE008228) (2 [...] |
| BP3500 protein network | https://string-db.org/network/257313.BP3500 | Putative dehydrogenase; Similar to Comamonas testosteroni 3-oxosteroid 1-dehydrogenase SW:3O1D_COMTE (Q06401) (573 aa) fasta scores: E(): 6.6e-37, 30.82% id in 584 aa, and to Pseudomonas aerugino [...] |
| BP3501 protein network | https://string-db.org/network/257313.BP3501 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5e-38, 39.22% id in 311 aa, and to Comamonas testostero [...] |
| BP3503 protein network | https://string-db.org/network/257313.BP3503 | LysR-family transcriptional regulator; Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR SW:ILVR_CAUCR (P52670) (296 aa) fasta scores: E(): 1.8e-12, 27.45% [...] |
| BP3504 protein network | https://string-db.org/network/257313.BP3504 | Conserved hypothetical protein; Similar to Comamonas testosteroni 3-oxosteroid 1-dehydrogenase SW:3O1D_COMTE (Q06401) (573 aa) fasta scores: E(): 2.8e-41, 29.56% id in 575 aa, and to Pseudomonas [...] |
| BP3505 protein network | https://string-db.org/network/257313.BP3505 | Transposase for IS481 element. |
| BP3506 protein network | https://string-db.org/network/257313.BP3506 | Conserved hypothetical protein; Similar to Escherichia coli pyrazinamidase/nicotinamidase [includes: pyrazinamidase; nicotinamidase] PncA SW:PNCA_ECOLI (P21369) (213 aa) fasta scores: E(): 2.1e-0 [...] |
| BP3507 protein network | https://string-db.org/network/257313.BP3507 | Conserved hypothetical protein; Limited database matches to the full length CDS. Similar to Escherichia coli hypothetical protein YhcK TR:P77793 (EMBL:AE000246) (460 aa) fasta scores: E(): 1.2e-5 [...] |
| BP3508 protein network | https://string-db.org/network/257313.BP3508 | Hypothetical protein; Similar to Bacillus halodurans hypothetical protein BH3794 TR:Q9K6D5 (EMBL:AP001520) (231 aa) fasta scores: E(): 2.9e-13, 31.76% id in 170 aa, and to the C-terminal region o [...] |
| BP3510 protein network | https://string-db.org/network/257313.BP3510 | Hypothetical protein (pseudogene); Inverted repeat for IS481 element. |
| BP3511 protein network | https://string-db.org/network/257313.BP3511 | Hypothetical protein; No significan database matches. |
| BP3512 protein network | https://string-db.org/network/257313.BP3512 | Hypothetical protein; No significant database matches. |
| BP3513 protein network | https://string-db.org/network/257313.BP3513 | Hypothetical protein; No significant database matches. |
| BP3515 protein network | https://string-db.org/network/257313.BP3515 | Conserved hypothetical protein (Pseudogene); (CCGCG)2 in pertussis; (CCGCG)3 in parapertussis and bronchiseptica. |
| BP3517 protein network | https://string-db.org/network/257313.BP3517 | Putative membrane protein; Similar to Rhizobium loti hypothetical protein MLL2445 TR:Q98ID9 (EMBL:AP002999) (200 aa) fasta scores: E(): 1.6, 24.61% id in 195 aa, and to Agrobacterium tumefaciens [...] |
| BP3518 protein network | https://string-db.org/network/257313.BP3518 | Putative phospholipase D family protein; C-terminus is similar to the C-terminal region of Bacillus firmus cardiolipin synthetase Cls SW:CLS_BACFI (O66043) (503 aa) fasta scores: E(): 7.5e-18, 33 [...] |
| BP3519 protein network | https://string-db.org/network/257313.BP3519 | Transposase for IS481 element. |
| BP3520 protein network | https://string-db.org/network/257313.BP3520 | Transposase for IS481 element. |
| BP3521 protein network | https://string-db.org/network/257313.BP3521 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA3602 TR:Q9HY24 (EMBL:AE004780) (536 aa) fasta scores: E(): 1.1e-144, 65.1% id in 533 aa. Internal region of the [...] |
| BP3522 protein network | https://string-db.org/network/257313.BP3522 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA5430 TR:Q9HTD6 (EMBL:AE004955) (404 aa) fasta scores: E(): 1.7e-89, 63.59% id in 401 aa, and to Rhizobium melil [...] |
| BP3523 protein network | https://string-db.org/network/257313.BP3523 | Putative membrane protein; Similar to Agrobacterium tumefaciens hypothetical protein AGR_C_3303p TR:AAK87565 (EMBL:AE008100) (312 aa) fasta scores: E(): 1.2e-22, 32.81% id in 320 aa, and to Rhizo [...] |
| BP3524 protein network | https://string-db.org/network/257313.BP3524 | Putative acetyltransferase; Similar to Bacillus halodurans hypothetical protein BH1438 TR:Q9KCY1 (EMBL:AP001512) (144 aa) fasta scores: E(): 4.1e-15, 38.73% id in 142 aa, and to Pseudomonas aerug [...] |
| BP3525 protein network | https://string-db.org/network/257313.BP3525 | Similar to Pseudomonas aeruginosa hypothetical protein PA1424 TR:Q9I3S0 (EMBL:AE004572) (203 aa) fasta scores: E(): 2.8e-39, 58.91% id in 202 aa, and to Vibrio cholerae hypothetical protein VC198 [...] |
| rnr protein network | https://string-db.org/network/257313.BP3526 | Putative ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. |
| rlmB protein network | https://string-db.org/network/257313.BP3527 | Putative tRNA/rRNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. |
| BP3528 protein network | https://string-db.org/network/257313.BP3528 | Cys/Met metabolism PLP-dependent enzyme; Similar to Corynebacterium glutamicum cystathionine gamma-synthase MetB TR:Q9RQ97 (EMBL:AF126953) (386 aa) fasta scores: E(): 1.2e-21, 32.43% id in 407 aa [...] |
| BP3529 protein network | https://string-db.org/network/257313.BP3529 | Conserved hypothetical protein; Previously sequenced as Bordetella bronchiseptica hypothetical protein TR:Q9S3N8 (EMBL:AJ132742) (226 aa) fasta scores: E(): 2e-91, 100% id in 226 aa. Similar to P [...] |
| hupB protein network | https://string-db.org/network/257313.BP3530 | DNA-binding protein Hu-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. |
| tonB protein network | https://string-db.org/network/257313.BP3531 | Siderophore-mediated iron transport protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specifi [...] |
| exbB protein network | https://string-db.org/network/257313.BP3532 | MotA/TolQ/ExbB proton channel family protein; C-terminal region is similar to Escherichia coli inner membrane protein that maintains integrity of cell envelope and tolerance to group A colicins T [...] |
| exbD protein network | https://string-db.org/network/257313.BP3533 | Similar to Escherichia coli biopolymer transport protein ExbD SW:EXBD_ECOLI (P18784) (141 aa) fasta scores: E(): 2.1e-09, 31.53% id in 130 aa. Previously sequenced as Bordetella pertussis putativ [...] |
| basR protein network | https://string-db.org/network/257313.BP3534 | Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 1. [...] |
| BP3535 protein network | https://string-db.org/network/257313.BP3535 | Sensor kinase protein; Two-component regulatory system family, sensor kinase protein. No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Es [...] |
| kup protein network | https://string-db.org/network/257313.BP3536 | Putative potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. |
| argG protein network | https://string-db.org/network/257313.BP3537 | Similar to Escherichia coli argininosuccinate synthase ArgG SW:ASSY_ECOLI (P22767) (446 aa) fasta scores: E(): 2.9e-140, 80.27% id in 441 aa, and to Pasteurella multocida argininosuccinate syntha [...] |
| argF protein network | https://string-db.org/network/257313.BP3538 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...] |
| argD protein network | https://string-db.org/network/257313.BP3539 | Similar to Corynebacterium glutamicum acetylornithine aminotransferase ArgD SW:ARGD_CORGL (Q59282) (389 aa) fasta scores: E(): 5.5e-48, 41.43% id in 391 aa, and to Rhizobium meliloti putative ace [...] |
| BP3540 protein network | https://string-db.org/network/257313.BP3540 | Similar to Ralstonia solanacearum hypothetical protein rsc2555 rsc2555 or rs00734 SWALL:Q8XWB9 (EMBL:AL646070) (117 aa) fasta scores: E(): 6.2e-20, 60.63% id in 94 aa. |
| BP3541 protein network | https://string-db.org/network/257313.BP3541 | LysR family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator PA2877 TR:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 1e-67, 60.46% id in 301 aa, and t [...] |
| BP3542 protein network | https://string-db.org/network/257313.BP3542 | Similar to Picea abies short-chain type dehydrogenase/reductase SW:SDR1_PICAB (Q08632) (271 aa) fasta scores: E(): 2.1e-15, 31.25% id in 240 aa, and to Pseudomonas aeruginosa probable short-chain [...] |
| BP3543 protein network | https://string-db.org/network/257313.BP3543 | Putative D-isomer specific 2-hydroxyacid dehydrogenase; Similar to Hyphomicrobium methylovorum glycerate dehydrogenase SW:DHGY_HYPME (P36234) (321 aa) fasta scores: E(): 9.8e-27, 32.29% id in 322 [...] |
| BP3544 protein network | https://string-db.org/network/257313.BP3544 | Putative lipoprotein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.7e-43, 39.62% id in 318 aa, and to Agrobacterium tumefac [...] |
| BP3545 protein network | https://string-db.org/network/257313.BP3545 | Hypothetical protein; Poor database matches. Similar to C-terminal region of Comamonas testosteroni hypothetical protein Orf5 TR:Q9S154 (EMBL:AB024335) (278 aa) fasta scores: E(): 0.21, 33.33% id [...] |
| BP3546 protein network | https://string-db.org/network/257313.BP3546 | Conserved hypothetical protein; Similar to Corynebacterium glutamicum dihydrodipicolinate synthase DapA SW:DAPA_CORGL (P19808) (301 aa) fasta scores: E(): 1.8, 20.35% id in 280 aa, and to Rhizobi [...] |
| BP3547 protein network | https://string-db.org/network/257313.BP3547 | GntR family regulatory protein; Similar to Escherichia coli pyruvate dehydrogenase complex repressor PdhR SW:PDHR_ECOLI (P06957) (254 aa) fasta scores: E(): 1.3e-13, 33.9% id in 233 aa, and to Rh [...] |
| BP3548 protein network | https://string-db.org/network/257313.BP3548 | Transposase for IS481 element. |
| BP3550 protein network | https://string-db.org/network/257313.BP3550 | Putative transport protein (pseudogene); 12 probable transmembrane helices predicted for BP3549 by TMHMM2.0 at aa 96-115, 120-139, 152-171, 175-197, 204-226, 236-258, 279-301, 321-340, 347-369, 3 [...] |
| ahpD protein network | https://string-db.org/network/257313.BP3551 | Putative antioxidant protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC en [...] |
| ahpC protein network | https://string-db.org/network/257313.BP3552 | Similar to Streptomyces coelicolor alkyl hydroperoxide reductase AhpC SWALL:Q9RN72 (EMBL:AF186371) (184 aa) fasta scores: E(): 9.6e-31, 51.09% id in 182 aa, and to Ralstonia solanacearum putative [...] |
| risA protein network | https://string-db.org/network/257313.BP3554 | Sensor kinase protein (pseudogene); (C)3 in pertussis; (C)2 in parapertussis and bronchiseptica. |
| BP3555 protein network | https://string-db.org/network/257313.BP3555 | Putative acetyltransferase; N-terminal region is similar to Pseudomonas aeruginosa hypothetical protein PA3685 TR:Q9HXV5 (EMBL:AE004788) (226 aa) fasta scores: E(): 3.2e-14, 40% id in 235 aa. C-t [...] |
| BP3556 protein network | https://string-db.org/network/257313.BP3556 | Bacteriophage-related DNA polymerase; C-terminus is similar to the C-terminal regions of Rhizobium loti MLL7705 TR:Q985F0 (EMBL:AP003012) (291 aa) fasta scores: E(): 9.6e-24, 46.66% id in 255 aa, [...] |
| BP3557 protein network | https://string-db.org/network/257313.BP3557 | Putative membrane protein; Similar to Escherichia coli hypothetical protein YgeD SW:YGED_ECOLI (P39196) (397 aa) fasta scores: E(): 4.7e-21, 37.19% id in 414 aa, and to Neisseria meningitidis put [...] |
| smc protein network | https://string-db.org/network/257313.BP3558 | Putative chromosome partition protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. |
| BP3559 protein network | https://string-db.org/network/257313.BP3559 | Putative membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also requ [...] |
| ligA protein network | https://string-db.org/network/257313.BP3560 | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy sourc [...] |
| BP3561 protein network | https://string-db.org/network/257313.BP3561 | Putative peptidyl-prolyl cis-trans isomerase; Similar to Campylobacter jejuni cell binding factor 2 precursor Cbf2 SW:CBF2_CAMJE (Q46105) (273 aa) fasta scores: E(): 8.7e-17, 30.25% id in 271 aa, [...] |
| BP3562 protein network | https://string-db.org/network/257313.BP3562 | BolA-like protein; Similar to Escherichia coli general stress response protein and possible regulator of murein genes, BolA SW:BOLA_ECOLI (P15298) (105 aa) fasta scores: E(): 0.00043, 36.84% id i [...] |
| BP3563 protein network | https://string-db.org/network/257313.BP3563 | Putative intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. |
| msrB protein network | https://string-db.org/network/257313.BP3564 | Similar to Escherichia coli peptide methionine sulfoxide reductase MsrB or b1778 or z2817 or ecs2487 SWALL:MSRB_ECOLI (SWALL:P39903) (137 aa) fasta scores: E(): 6.9e-26, 49.21% id in 128 aa, and [...] |
| BP3565 protein network | https://string-db.org/network/257313.BP3565 | Similar to Deinococcus radiodurans ABC transporter, ATP-binding protein DR2469 TR:Q9RRL9 (EMBL:AE002076) (226 aa) fasta scores: E(): 5.9e-39, 59.72% id in 221 aa, and to Rhizobium meliloti putati [...] |
| BP3566 protein network | https://string-db.org/network/257313.BP3566 | Putative cobalt transport protein; Similar to Deinococcus radiodurans conserved hypothetical protein DR2468 TR:Q9RRM0 (EMBL:AE002076) (198 aa) fasta scores: E(): 1.1e-21, 46.76% id in 201 aa, and [...] |
| BP3567 protein network | https://string-db.org/network/257313.BP3567 | BioY family protein; Similar to Bacillus sphaericus biotin synthase BioY SW:BIOY_BACSH (P22819) (196 aa) fasta scores: E(): 1.1e-08, 33.51% id in 188 aa, and to Rhizobium meliloti hypothetical tr [...] |
| BP3568 protein network | https://string-db.org/network/257313.BP3568 | Putative exported protein; N-terminus is similar to the N-terminal region of Salmonella typhimurium Leu/Ile/Val/Thr-binding protein precursor LivJ SW:LIVJ_SALTY (P17215) (365 aa) fasta scores: E( [...] |
| BP3569 protein network | https://string-db.org/network/257313.BP3569 | Similar to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivH SW:LIVH_ECOLI (P08340) (308 aa) fasta scores: E(): 2.4e-11, 27.62% id in 333 aa, and to [...] |
| BP3570 protein network | https://string-db.org/network/257313.BP3570 | Similar to Streptomyces coelicolor putative branched amino acid transport system permease sco7184 or sc8a11.12 SWALL:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 9e-21, 32.23% id in 335 aa; [...] |
| BP3571 protein network | https://string-db.org/network/257313.BP3571 | Putative aminotransferase; Similar to Escherichia coli branched-chain amino acid aminotransferase IlvE SW:ILVE_ECOLI (P00510) (308 aa) fasta scores: E(): 3.2e-12, 26.82% id in 287 aa, and to Rhiz [...] |
| BP3572 protein network | https://string-db.org/network/257313.BP3572 | Similar to Escherichia coli glycine betaine-binding periplasmic protein precursor ProX SW:PROX_ECOLI (P14177) (330 aa) fasta scores: E(): 1.8e-07, 23.07% id in 338 aa, and to Rhizobium meliloti p [...] |
| BP3573 protein network | https://string-db.org/network/257313.BP3573 | Putative branched-chain amino acid transport permease; Similar to Agrobacterium tumefaciens hypothetical protein AGR_L_1453p TR:AAK89305 (EMBL:AE008271) (335 aa) fasta scores: E(): 1.2e-57, 58.87 [...] |
| BP3574 protein network | https://string-db.org/network/257313.BP3574 | Similar to Rhizobium meliloti putative permease ABC transporter protein SMC03118 TR:CAC47554 (EMBL:AL591792) (295 aa) fasta scores: E(): 5.6e-77, 72.1% id in 294 aa, and to Agrobacterium tumefaci [...] |
| BP3575 protein network | https://string-db.org/network/257313.BP3575 | Putative exported protein; Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SW:BRAC_PSEAE (P21175) (373 aa) fasta scores: E [...] |
| BP3576 protein network | https://string-db.org/network/257313.BP3576 | ABC transporter ATP-binding protein; Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG SW:BRAG_PSEAE (P21630) (233 aa) fasta scores: E() [...] |
| BP3577 protein network | https://string-db.org/network/257313.BP3577 | ABC transporter ATP-binding protein; Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF SW:BRAF_PSEAE (P21629) (255 aa) fasta scores: E() [...] |
| nth protein network | https://string-db.org/network/257313.BP3578 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...] |
| BP3579 protein network | https://string-db.org/network/257313.BP3579 | Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB su [...] |
| BP3580 protein network | https://string-db.org/network/257313.BP3580 | Intracellular PHB depolymerase; Similar to Alcaligenes eutrophus intracellular poly[D(-)-3-hydroxybutyrate] (PHB) depolymerase PhaZ TR:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 1.2e-107, [...] |
| BP3581 protein network | https://string-db.org/network/257313.BP3581 | Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SW:FENR_AZOVI (Q44532) (257 aa) fasta scores: E(): 1.4e-28, 37.59% id in 258 aa, and to Pseudomonas aeruginosa probable oxidoreduc [...] |
| BP3582 protein network | https://string-db.org/network/257313.BP3582 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. |
| pncB protein network | https://string-db.org/network/257313.BP3583 | Pututative nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to t [...] |
| BP3584 protein network | https://string-db.org/network/257313.BP3584 | Similar to Haemophilus ducreyi hypothetical protein Hypo117 SW:Y117_HAEDU (O30825) (117 aa) fasta scores: E(): 3e-25, 60.17% id in 113 aa, and to Xylella fastidiosa hypothetical protein XF1711 TR [...] |
| BP3585 protein network | https://string-db.org/network/257313.BP3585 | Similar to Streptomyces coelicolor hypothetical protein SCF56.21 TR:Q9RD46 (EMBL:AL133424) (151 aa) fasta scores: E(): 2.6e-12, 40.47% id in 168 aa, and to Mycobacterium leprae hypothetical prote [...] |
| BP3586 protein network | https://string-db.org/network/257313.BP3586 | Similar to Pseudomonas aeruginosa hypothetical protein PA4030 TR:Q9HWZ7 (EMBL:AE004820) (276 aa) fasta scores: E(): 2.8e-06, 40.97% id in 266 aa, and to Escherichia coli hypothetical protein YeeI [...] |
| relA protein network | https://string-db.org/network/257313.BP3587 | Putative GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in respons [...] |
| BP3588 protein network | https://string-db.org/network/257313.BP3588 | Putative peptidase; Similar to Escherichia coli acetylornithine deacetylase ArgE SW:ARGE_ECOLI (P23908) (383 aa) fasta scores: E(): 6.6e-27, 36.87% id in 358 aa, and to Pseudomonas aeruginosa pro [...] |
| trpB protein network | https://string-db.org/network/257313.BP3589 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. |
| trpA protein network | https://string-db.org/network/257313.BP3590 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. |
| accD protein network | https://string-db.org/network/257313.BP3591 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its [...] |
| metH protein network | https://string-db.org/network/257313.BP3594 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subse [...] |
| BP3595 protein network | https://string-db.org/network/257313.BP3595 | Putative outer membrane protein; Similar to Salmonella typhimurium vitamin B12 receptor precursor BtuB SW:BTUB_SALTY (P37409) (614 aa) fasta scores: E(): 5.4e-37, 28.33% id in 614 aa, and to Pseu [...] |
| BP3596 protein network | https://string-db.org/network/257313.BP3596 | Periplasmic binding protein; Similar to Salmonella typhimurium cobalamin periplasmic binding protein BtuF TR:Q9ZFP9 (EMBL:AF096877) (266 aa) fasta scores: E(): 2.9e-15, 34.66% id in 251 aa, and t [...] |
| thiG protein network | https://string-db.org/network/257313.BP3597 | Thiazole biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate [...] |
| thiD-2 protein network | https://string-db.org/network/257313.BP3598 | Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD SW:THID_ECOLI (P76422) (266 aa) fasta scores: E(): 3e-44, 51.47% id in 272 aa, and to Rhizobium meliloti phosphomethylpyrimidine ki [...] |
| BP3599 protein network | https://string-db.org/network/257313.BP3599 | Similar to Escherichia coli protein-L-isoaspartate O-methyltransferase Pcm SW:PIMT_ECOLI (P24206) (207 aa) fasta scores: E(): 2.9e-16, 39.42% id in 175 aa, and to Neisseria meningitidis protein-L [...] |
| BP3602 protein network | https://string-db.org/network/257313.BP3602 | Putative outer membrane protein (pseudogene); Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. |
| BP3603 protein network | https://string-db.org/network/257313.BP3603 | Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase Nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 3.3e-17, 28.165% id in 316 aa and Acinetobac [...] |
| BP3604 protein network | https://string-db.org/network/257313.BP3604 | Putative membrane protein; Similar to Rhizobium meliloti hypothetical protein SMA0447 TR:AAK64892 (EMBL:AE007216) (373 aa) fasta scores: E(): 1.4e-29, 33.61% id in 357 aa, and to Pseudomonas aeru [...] |
| BP3605 protein network | https://string-db.org/network/257313.BP3605 | Conserved hypothetical protein; Poor database matches. Weakly similar to Homo sapiens peroxisomal phytanoyl-CoA dioxygenase PHYH SW:PAHX_HUMAN (O14832) (338 aa) fasta scores: E(): 1.4e-08, 24.08% [...] |
| BP3606 protein network | https://string-db.org/network/257313.BP3606 | Similar to Escherichia coli putative potassium channel protein Kch SW:KCH_ECOLI (P31069) (417 aa) fasta scores: E(): 5.6e-43, 39.73% id in 375 aa, and to Halobacterium sp potassium channel homolo [...] |
| rpsL protein network | https://string-db.org/network/257313.BP3608 | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. |
| rpsG protein network | https://string-db.org/network/257313.BP3609 | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...] |
| fusA-3 protein network | https://string-db.org/network/257313.BP3610 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- [...] |
| tuf protein network | https://string-db.org/network/257313.BP3611 | Elongation factor Tu; Similar to Escherichia coli elongation factor Tu (EF-Tu) TufA or TufB (duplicate of TufA) SW:EFTU_ECOLI (P02990) (393 aa) fasta scores: E(): 1.1e-122, 81.47% id in 394 aa, a [...] |
| rpsJ protein network | https://string-db.org/network/257313.BP3612 | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. |
| rplC protein network | https://string-db.org/network/257313.BP3613 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. |
| rplD protein network | https://string-db.org/network/257313.BP3614 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes [...] |
| rplW protein network | https://string-db.org/network/257313.BP3615 | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...] |
| rplB protein network | https://string-db.org/network/257313.BP3616 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...] |
| rpsS protein network | https://string-db.org/network/257313.BP3617 | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. |
| rplV protein network | https://string-db.org/network/257313.BP3618 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50 [...] |
| rpsC protein network | https://string-db.org/network/257313.BP3619 | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. |
| rplP protein network | https://string-db.org/network/257313.BP3620 | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. |
| rpmC protein network | https://string-db.org/network/257313.BP3621 | Similar to Escherichia coli 50S ribosomal protein L29 RpmC SW:RL29_ECOLI (P02429) (63 aa) fasta scores: E(): 7.4e-10, 59.67% id in 62 aa, and to Neisseria meningitidis 50S ribosomal protein L29 N [...] |
| rpsQ protein network | https://string-db.org/network/257313.BP3622 | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
| BP3623 protein network | https://string-db.org/network/257313.BP3623 | Putative hydrolase; Similar to Acidovorax sp. SA1 D-(-)-3-hydroxybutyrate oligomer hydrolase TR:Q9F1T8 (EMBL:AB044565) (291 aa) fasta scores: E(): 1.3e-65, 58.8% id in 284 aa, and to Rickettsia c [...] |
| BP3624 protein network | https://string-db.org/network/257313.BP3624 | Putative aldehyde dehydrogenase; Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD SW:GABD_ECOLI (P25526) (482 aa) fasta scores: E(): 3.4e-75, 43.12% id in 473 aa, and [...] |
| rplN protein network | https://string-db.org/network/257313.BP3626 | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. |
| rplX protein network | https://string-db.org/network/257313.BP3627 | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. |
| rplE protein network | https://string-db.org/network/257313.BP3628 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...] |
| rpsN protein network | https://string-db.org/network/257313.BP3629 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the un [...] |
| rpsH protein network | https://string-db.org/network/257313.BP3630 | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...] |
| rplF protein network | https://string-db.org/network/257313.BP3631 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...] |
| rplR protein network | https://string-db.org/network/257313.BP3632 | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...] |
| rpsE protein network | https://string-db.org/network/257313.BP3633 | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. |
| rpmD protein network | https://string-db.org/network/257313.BP3634 | Similar to Escherichia coli 50S ribosomal protein L30 RpmD SW:RL30_ECOLI (P02430) (58 aa) fasta scores: E(): 2e-07, 49.12% id in 57 aa, and to Streptomyces coelicolor 50S ribosomal protein L30 SC [...] |
| rplO protein network | https://string-db.org/network/257313.BP3635 | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. |
| secY protein network | https://string-db.org/network/257313.BP3636 | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...] |
| infA-2 protein network | https://string-db.org/network/257313.BP3637 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...] |
| rpmJ protein network | https://string-db.org/network/257313.BP3638 | Similar to Escherichia coli 50S ribosomal protein L36 RpmJ SW:RL36_ECOLI (P21194) (38 aa) fasta scores: E(): 8.8e-12, 71.05% id in 38 aa, and to Vibrio cholerae 50S ribosomal protein L36 VC2575 S [...] |
| rpsM protein network | https://string-db.org/network/257313.BP3639 | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...] |
| rpsK protein network | https://string-db.org/network/257313.BP3640 | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...] |
| rpsD protein network | https://string-db.org/network/257313.BP3641 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. |
| rpoA protein network | https://string-db.org/network/257313.BP3642 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rplQ protein network | https://string-db.org/network/257313.BP3643 | Similar to Escherichia coli 50S ribosomal protein L17 RplQ SW:RL17_ECOLI (P02416) (127 aa) fasta scores: E(): 5.3e-32, 68.5% id in 127 aa, and to Neisseria meningitidis 50S ribosomal protein L17 [...] |
| cutA protein network | https://string-db.org/network/257313.BP3645 | Histidine triad protein (pseudogene); HMMPfam hit to PF01230, HIT family. |
| dsbD protein network | https://string-db.org/network/257313.BP3646 | Thiol:disulfide interchange protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts [...] |
| BP3647 protein network | https://string-db.org/network/257313.BP3647 | Putative membrane protein; Similar to Bacillus halodurans hypothetical protein BH1741 TR:Q9KC33 (EMBL:AP001513) (306 aa) fasta scores: E(): 3.1e-22, 33.21% id in 283 aa, and to Pseudomonas aerugi [...] |
| hemB protein network | https://string-db.org/network/257313.BP3648 | Similar to Pseudomonas aeruginosa delta-aminolevulinic acid dehydratase HemB or Pa5243 SW:HEM2_PSEAE (Q59643) (337 aa) fasta scores: E(): 1.2e-78, 65.15% id in 330 aa, and to Neisseria meningitid [...] |
| engB protein network | https://string-db.org/network/257313.BP3649 | Putative GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB G [...] |
| BP3650 protein network | https://string-db.org/network/257313.BP3650 | Similar to Azotobacter vinelandii cytochrome c4 precursor CycA SW:CYC4_AZOVI (P43302) (210 aa) fasta scores: E(): 2.2e-18, 39.89% id in 193 aa, and to Pseudomonas stutzeri cytochrome c4 precursor [...] |
| BP3651 protein network | https://string-db.org/network/257313.BP3651 | Putative membrane protein; Similar to Neisseria meningitidis putative cytochrome c-type biogenesis protein NMB1804 TR:Q9JY04 (EMBL:AE002530) (671 aa) fasta scores: E(): 3.1e-46, 37.75% id in 694 [...] |
| BP3652 protein network | https://string-db.org/network/257313.BP3652 | Putative cytochrome c asssembly protein; C-terminus is similar to the C-terminal region of Chlamydomonas reinhardtii cytochrome c biogenesis protein CcsA SW:CCSA_CHLRE (P48269) (353 aa) fasta sco [...] |
| lysA protein network | https://string-db.org/network/257313.BP3653 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. |
| cyaY protein network | https://string-db.org/network/257313.BP3654 | Conserved hypothetical protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. |
| BP3655 protein network | https://string-db.org/network/257313.BP3655 | Similar to Escherichia coli penicillin-binding protein 1A MrcA SW:PBPA_ECOLI (P02918) (850 aa) fasta scores: E(): 2.2e-84, 37.45% id in 841 aa, and to Pseudomonas aeruginosa penicillin-binding pr [...] |
| aroK protein network | https://string-db.org/network/257313.BP3656 | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. |
| aroB protein network | https://string-db.org/network/257313.BP3657 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquin [...] |
| BP3658 protein network | https://string-db.org/network/257313.BP3658 | Putative phosphohydrolase; Weakly similar to Escherichia coli deoxyguanosinetriphosphate triphosphohydrolase Dgt SW:DGTP_ECOLI (P15723) (504 aa) fasta scores: E(): 0.00029, 25.37% id in 469 aa. S [...] |
| BP3659 protein network | https://string-db.org/network/257313.BP3659 | Similar to Dianthus caryophyllus glutathione S-transferase 1 Gst1 SW:GTZ1_DIACA (P28342) (221 aa) fasta scores: E(): 2.2e-07, 31.6% id in 174 aa, and to Rhizobium meliloti putative glutathione S- [...] |
| uvrA protein network | https://string-db.org/network/257313.BP3660 | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of [...] |
| BP3661 protein network | https://string-db.org/network/257313.BP3661 | Putative transport protein; Weakly similar to Escherichia coli tetracycline resistance protein TetA SW:TCR3_ECOLI (P02981) (396 aa) fasta scores: E(): 5.4e-10, 26.78% id in 392 aa. Similar to the [...] |
| ssb protein network | https://string-db.org/network/257313.BP3662 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action du [...] |
| bfrC protein network | https://string-db.org/network/257313.BP3663 | Ferric siderophore receptor; Similar to Vibrio anguillarum ferric anguibactin receptor precursor FatA SW:FATA_VIBAN (P11461) (726 aa) fasta scores: E(): 1.9e-33, 24.84% id in 664 aa, and to Pseud [...] |
| BP3664 protein network | https://string-db.org/network/257313.BP3664 | Similar to Pseudomonas aeruginosa hypothetical protein PA4095 TR:Q9HWT3 (EMBL:AE004825) (177 aa) fasta scores: E(): 2e-14, 32.23% id in 152 aa, and to Alcaligenes sp. 2,4'-dihydroxyacetophenone d [...] |
| BP3666 protein network | https://string-db.org/network/257313.BP3666 | Putative aldolase (Pseudogene); ~60 bp deletion in pertussis relative to parapertussis and bronchiseptica. |
| BP3667 protein network | https://string-db.org/network/257313.BP3667 | Similar to Streptomyces coelicolor putative GntR-family regulatory protein SC6F7.27c TR:Q9KZB5 (EMBL:AL353870) (261 aa) fasta scores: E(): 3e-05, 28% id in 250 aa, and to Deinococcus radiodurans [...] |
| BP3668 protein network | https://string-db.org/network/257313.BP3668 | Transcriptional regulator; Similar to Pseudomonas putida plasmid NAH7 transcriptional activator protein NahR SW:NAHR_PSEPU (P10183) (300 aa) fasta scores: E(): 3.5e-26, 33.09% id in 278 aa, and t [...] |
| BP3669 protein network | https://string-db.org/network/257313.BP3669 | Putative chlorohydrolase; Similar to Pseudomonas sp. hydroxydechloroatrazine ethylaminohydrolase AtzB SW:ATZB_PSESD (P95442) (481 aa) fasta scores: E(): 5.8e-07, 25.27% id in 463 aa, and to Agrob [...] |
| BP3670 protein network | https://string-db.org/network/257313.BP3670 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.6e-35, 36.84% id in 323 aa, and to Comamonas testos [...] |
| BP3671 protein network | https://string-db.org/network/257313.BP3671 | Putative glycosyl transferases; Similar to Xylella fastidiosa hypothetical protein XF1470 TR:Q9PDA9 (EMBL:AE003977) (376 aa) fasta scores: E(): 4e-28, 43.31% id in 374 aa. Weak similarity to Rhiz [...] |
| BP3672 protein network | https://string-db.org/network/257313.BP3672 | Hypothetical protein; Poor database matches. Weakly similar to Escherichia coli hypothetical protein YrbL SW:YRBL_ECOLI (P46021) (210 aa) fasta scores: E(): 0.024, 25.88% id in 197 aa. Also simil [...] |
| BP3673 protein network | https://string-db.org/network/257313.BP3673 | LysR-family transcriptional regulator; Similar to Salmonella typhimurium transcriptional activator protein MetR SW:METR_SALTY (P05984) (317 aa) fasta scores: E(): 1.9e-09, 25.67% id in 296 aa, an [...] |
| BP3674 protein network | https://string-db.org/network/257313.BP3674 | Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 5.4e-18, 31.84% id in 292 aa, and to Rhizobium meliloti putative [...] |
| BP3675 protein network | https://string-db.org/network/257313.BP3675 | Similar to Escherichia coli taurine transport system permease protein TauC SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 3.3e-34, 37.34% id in 241 aa, and to Pseudomonas aeruginosa probable [...] |
| BP3676 protein network | https://string-db.org/network/257313.BP3676 | Similar to Escherichia coli taurine transport ATP-binding protein TauB SW:TAUB_ECOLI (Q47538) (255 aa) fasta scores: E(): 3.2e-30, 41.5% id in 253 aa, and to Rhizobium loti ATP-binding protein of [...] |
| BP3677 protein network | https://string-db.org/network/257313.BP3677 | Similar to Pseudomonas aeruginosa hypothetical protein PA4186 TR:Q9HWJ5 (EMBL:AE004835) (439 aa) fasta scores: E(): 9.9e-53, 37.26% id in 432 aa, and to Agrobacterium tumefaciens hypothetical pro [...] |
| BP3678 protein network | https://string-db.org/network/257313.BP3678 | Putative exported protein; No significant database matches. |
| BP3679 protein network | https://string-db.org/network/257313.BP3679 | TetR-family transcriptional regulator; Similar to Streptomyces coelicolor positive regulator of secondary metabolite formation and sporulation CprA TR:O66121 (EMBL:AB000384) (215 aa) fasta scores [...] |
| glcB protein network | https://string-db.org/network/257313.BP3680 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to [...] |
| glcC protein network | https://string-db.org/network/257313.BP3682 | GntR-family transcriptional regulator (pseudogene); (A)2 in pertussis; (A)1 in parapertussis and bronchiseptica. |
| BP3683 protein network | https://string-db.org/network/257313.BP3683 | Putative exported protein; No significant database matches. Similar to N-terminal region of Ralstonia solanacearum probable flagellar hook-length control protein FliK TR:CAD17546 (EMBL:AL646078) [...] |
| ubiA protein network | https://string-db.org/network/257313.BP3684 | UbiA prenyltransferase family protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiqu [...] |
| BP3685 protein network | https://string-db.org/network/257313.BP3685 | Putative aminotransferase; Similar to Thermococcus litoralis alanine glyoxylate transaminase Agt TR:Q9C4M4 (EMBL:AB033996) (407 aa) fasta scores: E(): 5.7e-34, 34.76% id in 397 aa, and to Pyrococ [...] |
| BP3686 protein network | https://string-db.org/network/257313.BP3686 | Similar to Xylella fastidiosa hypothetical protein XF1230 TR:Q9PDZ8 (EMBL:AE003957) (162 aa) fasta scores: E(): 6.4e-38, 60.39% id in 154 aa. N-terminal region is weakly similar to N-terminus of [...] |
| BP3687 protein network | https://string-db.org/network/257313.BP3687 | Similar to Nicotiana sylvestris dihydrodipicolinate synthase DHDPS-R1 TR:Q42940 (EMBL:X79060) (308 aa) fasta scores: E(): 4e-07, 26.61% id in 263 aa, and to Neisseria meningitidis dihydrodipicoli [...] |
| BP3689 protein network | https://string-db.org/network/257313.BP3689 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| BP3690 protein network | https://string-db.org/network/257313.BP3690 | Conserved hypothetical protein; Weakly similar to Pseudomonas aeruginosa hypothetical protein PA0380 TR:Q9I6B5 (EMBL:AE004475) (66 aa) fasta scores: E(): 9.2e-10, 54.54% id in 66 aa, and to Caulo [...] |
| BP3691 protein network | https://string-db.org/network/257313.BP3691 | Prolyl iminopeptidase; Similar to Serratia marcescens proline iminopeptidase Pip SW:PIP_SERMA (O32449) (317 aa) fasta scores: E(): 3.1e-81, 63.34% id in 311 aa, and to Rhizobium meliloti putative [...] |
| trmB protein network | https://string-db.org/network/257313.BP3692 | Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. |
| BP3693 protein network | https://string-db.org/network/257313.BP3693 | LysR family regulatoy protein; Similar to Rhodobacter capsulatus LysR-type transcriptional activator CbbRI TR:O34014 (EMBL:U87283) (298 aa) fasta scores: E(): 1.1e-17, 31.89% id in 301 aa, and to [...] |
| BP3695 protein network | https://string-db.org/network/257313.BP3695 | Conserved hypothetical protein (pseudogene); (AG)2 in pertussis; (AG)1 in parapertussis and bronchiseptica. |
| BP3696 protein network | https://string-db.org/network/257313.BP3696 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-36, 43.35% id in 256 aa, and to Agrobacterium tu [...] |
| BP3698 protein network | https://string-db.org/network/257313.BP3698 | Conserved hypothetical protein (Pseudogene); Pseudogene. This CDS lacks a stop codon. The sequence has been checked and believed to be correct. Similar to Rhizobium loti hypothetical protein MLL3 [...] |
| BP3699 protein network | https://string-db.org/network/257313.BP3699 | Weakly similar to Rhizobium loti transcriptional regulator MLL4768 TR:Q98DC1 (EMBL:AP003004) (260 aa) fasta scores: E(): 1.1e-06, 24.49% id in 245 aa, and to Agrobacterium tumefaciens AGR_L_2068p [...] |
| BP3700 protein network | https://string-db.org/network/257313.BP3700 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.7e-37, 37.23% id in 325 aa, and to Agrobacterium tu [...] |
| BP3701 protein network | https://string-db.org/network/257313.BP3701 | Putative exported protein; Similar to Bacillus subtilis putative aliphatic sulfonates binding protein precursor SsuA SW:SSUA_BACSU (P40400) (332 aa) fasta scores: E(): 2.1e-12, 28.88% id in 270 a [...] |
| BP3702 protein network | https://string-db.org/network/257313.BP3702 | GntR-family transcriptional regulator; Similar to Pseudomonas putida histidine utilization repressor HutC SW:HUTC_PSEPU (P22773) (248 aa) fasta scores: E(): 3.5e-06, 27.38% id in 252 aa, and to P [...] |
| BP3703 protein network | https://string-db.org/network/257313.BP3703 | Similar to Escherichia coli taurine transport system permease protein TauC SW:TAUC_ECOLI (Q47539) (275 aa) fasta scores: E(): 1.9e-33, 36.32% id in 256 aa, and to Pseudomonas aeruginosa probable [...] |
| BP3704 protein network | https://string-db.org/network/257313.BP3704 | Similar to Rhizobium loti taurine transport system periplasmic protein MLR4517 TR:Q98DW7 (EMBL:AP003004) (337 aa) fasta scores: E(): 7e-07, 25.44% id in 334 aa> N-terminus is similar to the N-ter [...] |
| BP3705 protein network | https://string-db.org/network/257313.BP3705 | Similar to Escherichia coli taurine transport ATP-binding protein TauB SW:TAUB_ECOLI (Q47538) (255 aa) fasta scores: E(): 4.8e-33, 44.04% id in 252 aa, and to Rhizobium loti ATP-binding protein o [...] |
| BP3706 protein network | https://string-db.org/network/257313.BP3706 | Putative enoyl-CoA hydratase/isomerase family protein; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 6.5e-26, 38.95% [...] |
| BP3707 protein network | https://string-db.org/network/257313.BP3707 | Putative exported protein; Similar to Comamonas testosteroni hypothetical protein Orf4 TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.6e-34, 36.36% id in 319 aa, and to Rhizobium melilot [...] |
| BP3708 protein network | https://string-db.org/network/257313.BP3708 | Putative zinc-binding dehydrogenase; Similar to Caulobacter crescentus zinc-containing alcohol dehydrogenase CC0770 TR:Q9AA38 (EMBL:AE005752) (325 aa) fasta scores: E(): 8.5e-43, 43.71% id in 334 [...] |
| BP3709 protein network | https://string-db.org/network/257313.BP3709 | Putative racemase; Similar to Rhodococcus sp. AD45 putative racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 1.1e-50, 38% id in 400 aa, and to Streptomyces coelicolor putative [...] |
| BP3710 protein network | https://string-db.org/network/257313.BP3710 | TetR-family transcriptional regulator; Similar to Mycobacterium tuberculosis hypothetical protein MTV032.01 TR:O53641 (EMBL:AL021927) (214 aa) fasta scores: E(): 1.4e-07, 30.39% id in 204 aa, and [...] |
| nudC protein network | https://string-db.org/network/257313.BP3711 | Similar to Escherichia coli NADH pyrophosphatase NudC SW:NUDC_ECOLI (P32664) (257 aa) fasta scores: E(): 2.8e-27, 46.98% id in 166 aa. Similar to Pasteurella multocida NADH pyrophosphatase PM1735 [...] |
| BP3712 protein network | https://string-db.org/network/257313.BP3712 | Putative oxidoreductase; Similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase beta subunit PobB SW:POBB_PSEPS (Q52186) (319 aa) fasta scores: E(): 4.9e-32, 40.88% id in 318 aa, an [...] |
| BP3713 protein network | https://string-db.org/network/257313.BP3713 | Putative amidase; Similar to Pseudomonas putida amidase SW:AMID_PSEPU (O69768) (466 aa) fasta scores: E(): 1.1e-18, 32.71% id in 434 aa, and to Bradyrhizobium japonicum malonamidase E2 TR:Q9ZIV5 [...] |
| BP3714 protein network | https://string-db.org/network/257313.BP3714 | Putative zinc-binding dehydrogenases; No significant database matches to the full length CDS. C-terminal region is similar to an internal region of Pseudomonas aeruginosa probable oxidoreductase [...] |
| BP3715 protein network | https://string-db.org/network/257313.BP3715 | LysR-family transcriptional regulator; Similar to Erwinia chrysanthemi hydrogen peroxide-inducible genes activator OxyR SW:OXYR_ERWCH (Q9X725) (305 aa) fasta scores: E(): 2.9e-15, 27.92% id in 30 [...] |
| BP3716 protein network | https://string-db.org/network/257313.BP3716 | Putative exported protein; Similar to Salmonella typhimurium Leu/Ile/Val/Thr-binding protein precursor LivJ SW:LIVJ_SALTY (P17215) (365 aa) fasta scores: E(): 6.8e-10, 24.49% id in 343 aa, and to [...] |
| BP3717 protein network | https://string-db.org/network/257313.BP3717 | Similar to Escherichia coli hypothetical protein YlbE SW:YLBE_ECOLI (P77129) (419 aa) fasta scores: E(): 2.8e-27, 32.27% id in 409 aa, and to Streptomyces coelicolor hypothetical protein SC3F9.09 [...] |
| BP3718 protein network | https://string-db.org/network/257313.BP3718 | N-terminal region is similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF SW:BRAF_PSEAE (P21629) (255 aa) fasta scores: E(): 7.3e-23, 38.15 [...] |
| BP3719 protein network | https://string-db.org/network/257313.BP3719 | Similar to the C-terminal region of Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivM SW:LIVM_ECOLI (P22729) (425 aa) fasta scores: E(): 8.4e-09, 29. [...] |
| BP3720 protein network | https://string-db.org/network/257313.BP3720 | Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease protein BraD SW:BRAD_PSEAE (P21627) (307 aa) fasta scores: E(): 1.3e-18, 34.88% id in 301 aa, a [...] |
| BP3721 protein network | https://string-db.org/network/257313.BP3721 | Hypothetical protein; No significant database matches. |
| BP3722 protein network | https://string-db.org/network/257313.BP3722 | Iron-sulphur protein; N-terminal region is similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase alpha subunit PobA SW:POBA_PSEPS (Q52185) (409 aa) fasta scores: E(): 6.4e-32, 36.9 [...] |
| BP3723 protein network | https://string-db.org/network/257313.BP3723 | Hypothetical protein; No significant database matches. |
| BP3724 protein network | https://string-db.org/network/257313.BP3724 | Similar to Agrobacterium tumefaciens conserved hypothetical protein AGR_L_1509p TR:AAK89332 (EMBL:AE008274) (315 aa) fasta scores: E(): 1.8e-71, 60.81% id in 319 aa, and to Rhizobium loti hypothe [...] |
| nadC protein network | https://string-db.org/network/257313.BP3725 | Similar to Mycobacterium tuberculosis nicotinate-nucleotide pyrophosphorylase [carboxylating] NadC SW:NADC_MYCTU (O06594) (285 aa) fasta scores: E(): 1.6e-36, 50.18% id in 267 aa, and to Rhizobiu [...] |
| BP3726 protein network | https://string-db.org/network/257313.BP3726 | Transposase for IS481 element. |
| BP3727 protein network | https://string-db.org/network/257313.BP3727 | Putative glycosyl transferases; Weakly similar to Rhizobium meliloti lipopolysaccharide core biosynthesis glycosyl transferase LpsD SW:LPSD_RHIME (Q9R9N0) (343 aa) fasta scores: E(): 0.0003, 23.1 [...] |
| rkpK protein network | https://string-db.org/network/257313.BP3728 | Similar to Rhizobium meliloti udp-glucose 6-dehydrogenase RkpK SW:UDG_RHIME (O54068) (437 aa) fasta scores: E(): 1e-76, 48.19% id in 442 aa, and to Burkholderia pseudomallei putative UDP-glucose [...] |
| BP3729 protein network | https://string-db.org/network/257313.BP3729 | Putative membrane protein; Similar to Streptomyces coelicolor methylenomycin A resistance protein Mmr SW:MMR_STRCO (P11545) (475 aa) fasta scores: E(): 1e-23, 28.69% id in 453 aa, and to Escheric [...] |
| glmU protein network | https://string-db.org/network/257313.BP3730 | UDP-N-acetylglucosamine synthesis bifunctional protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal d [...] |
| BP3731 protein network | https://string-db.org/network/257313.BP3731 | Similar to Ralstonia solanacearum hypothetical protein rsc0305 rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 4e-07, 39.76% id in 259 aa. |
| BP3732 protein network | https://string-db.org/network/257313.BP3732 | Putative exported protein; C-terminus is weakly similar to the C-terminal region of Salmonella typhimurium outer membrane lipoprotein precursor SlyB SW:SLYB_SALTY (Q53549) (155 aa) fasta scores: [...] |
| BP3733 protein network | https://string-db.org/network/257313.BP3733 | Similar to Ralstonia solanacearum hypothetical protein Rsc3357 or Rs02632 SWALL:Q8XU37 (EMBL:AL646074) (75 aa) fasta scores: E(): 6.7e-14, 61.19% id in 67 aa. |
| BP3734 protein network | https://string-db.org/network/257313.BP3734 | SCO1/SenC family protein; Similar to Caulobacter crescentus SCO1/2 family protein CC3503 TR:Q9A2Q3 (EMBL:AE006008) (190 aa) fasta scores: E(): 3.9e-28, 50% id in 170 aa, and to Rhizobium meliloti [...] |
| ctaB protein network | https://string-db.org/network/257313.BP3735 | UbiA prenyltransferase family protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. |
| BP3736 protein network | https://string-db.org/network/257313.BP3736 | Putative cytochrome oxidase assembly protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0112 TR:Q9I720 (EMBL:AE004449) (357 aa) fasta scores: E(): 5.1e-44, 44% id in 325 aa, and to [...] |
| BP3737 protein network | https://string-db.org/network/257313.BP3737 | Putative exported protein; Similar to Pseudomonas stutzeri hypothetical protein SW:YAPT_PSEST (P47206) (193 aa) fasta scores: E(): 0.061, 28.57% id in 182 aa, and to Pseudomonas aeruginosa hypoth [...] |
| BP3738 protein network | https://string-db.org/network/257313.BP3738 | Putative membrane protein; Similar to the C-terminal regions of Streptomyces coelicolor putative membrane protein SCI8.14 TR:Q9RJ39 (EMBL:AL132644) (290 aa) fasta scores: E(): 2.5e-06, 30.31% id [...] |
| BP3739 protein network | https://string-db.org/network/257313.BP3739 | Putative membrane protein; Poor database matches. Similar to Pseudomonas aeruginosa hypothetical protein PA0109 TR:Q9I723 (EMBL:AE004449) (69 aa) fasta scores: E(): 0.0016, 35.48% id in 62 aa. |
| coIII protein network | https://string-db.org/network/257313.BP3740 | Similar to Pseudomonas aeruginosa cytochrome c oxidase, subunit III PA0108 TR:Q9I724 (EMBL:AE004449) (295 aa) fasta scores: E(): 1.4e-52, 50.34% id in 288 aa, and to Dinornis giganteus cytochrome [...] |
| BP3741 protein network | https://string-db.org/network/257313.BP3741 | Putative membrane protein; No significant database matches. |
| BP3742 protein network | https://string-db.org/network/257313.BP3742 | Putative membrane protein; Poor database matches. Similar to Rhizobium meliloti hypothetical transmembrane protein SMC00130 TR:CAC45479 (EMBL:AL591785) (46 aa) fasta scores: E(): 7.9, 44.82% id i [...] |
| ctaD protein network | https://string-db.org/network/257313.BP3743 | Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the en [...] |
| BP3744 protein network | https://string-db.org/network/257313.BP3744 | Putative bifunctional protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center [...] |
| BP3745 protein network | https://string-db.org/network/257313.BP3745 | Conserved hypothetical protein; Similar to the N-terminal region of Schizosaccharomyces pombe thiamine pyrophosphokinase TNR3 SW:TNR3_SCHPO (P41888) (569 aa) fasta scores: E(): 2.8e-05, 23.9% id [...] |
| BP3746 protein network | https://string-db.org/network/257313.BP3746 | Putative sodium/hydrogen exchanger family; N-terminus is similar to the N-terminal region of Oncorhynchus mykiss sodium-hydrogen exchange protein-beta SW:NAHB_ONCMY (Q01345) (759 aa) fasta scores [...] |
| cpdA-2 protein network | https://string-db.org/network/257313.BP3747 | Conserved hypothetical protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. |
| rpoH protein network | https://string-db.org/network/257313.BP3748 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involve [...] |
| BP3749 protein network | https://string-db.org/network/257313.BP3749 | Putative membrane protein; Poor database matches. Similar to Pseudomonas aeruginosa hypothetical protein PA1825 TR:Q9I2S0 (EMBL:AE004609) (214 aa) fasta scores: E(): 1.1e-07, 28.64% id in 199 aa. |
| BP3750 protein network | https://string-db.org/network/257313.BP3750 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. |
| adhI protein network | https://string-db.org/network/257313.BP3751 | Similar to Rhodobacter sphaeroides alcohol dehydrogenase class III AdhI SW:ADHI_RHOSH (P72324) (376 aa) fasta scores: E(): 3.6e-113, 75.79% id in 376 aa, and to Anabaena azollae glutathione depen [...] |
| BP3752 protein network | https://string-db.org/network/257313.BP3752 | Similar to Ralstonia solanacearum hypothetical protein Rsc2966 or Rs01331 SWALL:Q8XV65 (EMBL:AL646072) (241 aa) fasta scores: E(): 1.6e-25, 40.16% id in 249 aa, and to Rhizobium loti hypothetical [...] |
| gltB protein network | https://string-db.org/network/257313.BP3753 | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 8.3e-106, 44.45% id in 1597 aa, and to Deinococcus radioduran [...] |
| GltD protein network | https://string-db.org/network/257313.BP3754 | Similar to Azospirillum brasilense glutamate synthase [NADPH] small chain gltD SW:GLTD_AZOBR (Q05756) (480 aa) fasta scores: E(): 2.1e-35, 38.58% id in 482 aa, and to the C-terminal region of Med [...] |
| BP3755 protein network | https://string-db.org/network/257313.BP3755 | Similar to Vibrio cholerae outer membrane protein OmpW SW:OMPW_VIBCH (P17266) (217 aa) fasta scores: E(): 2.3e-18, 44.6% id in 213 aa, and to Escherichia coli outer membrane protein OmpW SW:OMPW_ [...] |
| BP3756 protein network | https://string-db.org/network/257313.BP3756 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-48, 42.18% id in 320 aa, and to Pseudomonas chlo [...] |
| BP3757 protein network | https://string-db.org/network/257313.BP3757 | Similar to Vibrio cholerae ABC transporter, ATP-binding protein VC2520 TR:Q9KP56 (EMBL:AE004321) (267 aa) fasta scores: E(): 4.6e-41, 51.16% id in 258 aa, and to Neisseria meningitidis ABC transp [...] |
| BP3758 protein network | https://string-db.org/network/257313.BP3758 | Putative membrane protein; Similar to Pseudomonas putida toluene tolerance protein Ttg2B TR:Q9Z401 (EMBL:AF106002) (265 aa) fasta scores: E(): 6.1e-45, 57.02% id in 242 aa, and to Pasteurella mul [...] |
| BP3759 protein network | https://string-db.org/network/257313.BP3759 | Mce related protein; Similar to Pseudomonas putida toluene tolerance protein Ttg2C TR:Q9Z400 (EMBL:AF106002) (161 aa) fasta scores: E(): 4.7e-22, 46.54% id in 159 aa, and to Neisseria meningitidi [...] |
| BP3760 protein network | https://string-db.org/network/257313.BP3760 | Similar to Shigella flexneri lipoprotein required for intercellular spreading, VacJ SW:VACJ_SHIFL (P43262) (251 aa) fasta scores: E(): 2e-22, 35.77% id in 246 aa, and to Pseudomonas aeruginosa hy [...] |
| BP3761 protein network | https://string-db.org/network/257313.BP3761 | Putative exported protein; Similar to Neisseria meningitidis putative periplasmic transport protein NMA0488 TR:Q9JW92 (EMBL:AL162753) (196 aa) fasta scores: E(): 4.3e-16, 33.82% id in 204 aa, and [...] |
| BP3764 protein network | https://string-db.org/network/257313.BP3764 | Probable ATP-binding ABC transporter protein (pseudogene); (C)8 in pertussis; (C)6 in parapertussis and bronchiseptica. |
| BP3765 protein network | https://string-db.org/network/257313.BP3765 | BolA-like protein; Similar to Escherichia coli putative general stress response and morphology regulator BolA SW:BOLA_ECOLI (P15298) (105 aa) fasta scores: E(): 0.00069, 38.46% id in 52 aa, and t [...] |
| murA protein network | https://string-db.org/network/257313.BP3766 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. |
| hisG protein network | https://string-db.org/network/257313.BP3767 | Putative ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because [...] |
| hisD protein network | https://string-db.org/network/257313.BP3768 | Putative histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. |
| hisC protein network | https://string-db.org/network/257313.BP3769 | Similar to Escherichia coli histidinol-phosphate aminotransferase HisC SW:HIS8_ECOLI (P06986) (356 aa) fasta scores: E(): 2.3e-20, 31.4% id in 363 aa, and to Neisseria meningitidis histidinol-pho [...] |
| hisB protein network | https://string-db.org/network/257313.BP3770 | Imidazoleglycerol-phosphate dehydratase; Similar to C-terminal region of Escherichia coli histidine biosynthesis bifunctional protein hisB [includes: histidinol-phosphatase and imidazoleglycerolp [...] |
| hisH protein network | https://string-db.org/network/257313.BP3771 | Amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the [...] |
| hisA protein network | https://string-db.org/network/257313.BP3772 | Histidine biosynthesis protein; Similar to Escherichia coli phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA SW:HIS4_ECOLI (P10371) (245 aa) fasta scores: E(): 6.9e-21 [...] |
| hisF protein network | https://string-db.org/network/257313.BP3773 | Histidine biosynthesis protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR f [...] |
| hisI protein network | https://string-db.org/network/257313.BP3774 | Putative phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. |
| hisE protein network | https://string-db.org/network/257313.BP3775 | phosphoribosyl-ATP pyrophosphohydrolase; Similar to the C-terminal region of Escherichia coli histidine biosynthesis bifunctional protein [includes: phosphoribosyl-AMP cyclohydrolase; phosphoribo [...] |
| BP3776 protein network | https://string-db.org/network/257313.BP3776 | MttA/Hcf106 family protein; Similar to Homo sapiens protein kinase C interacting protein 1, PKCI-1 SW:HINT_HUMAN (P49773) (125 aa) fasta scores: E(): 3.1e-16, 44.86% id in 107 aa, and to Neisseri [...] |
| tatE protein network | https://string-db.org/network/257313.BP3777 | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their s [...] |
| tatB protein network | https://string-db.org/network/257313.BP3778 | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their s [...] |
| tatC protein network | https://string-db.org/network/257313.BP3779 | Putative Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif i [...] |
| bugT protein network | https://string-db.org/network/257313.BP3782 | Transposase (Pseudogene); Inverted repeat for IS481 element. |
| ptxA protein network | https://string-db.org/network/257313.BP3783 | Pertussis toxin subunit 1 precursor; S1 is an NAD-dependent ADP-ribosyltransferase, which plays a crucial role in the pathogenesis of B.pertussis causing disruption of normal host cellular regula [...] |
| ptxB protein network | https://string-db.org/network/257313.BP3784 | Pertussis toxin subunit 2 precursor; PTX oligomer B binds to receptors on the eukaryotic cell surface and facilitates the translocation of the toxic subunit across the cell membrane. |
| ptxD protein network | https://string-db.org/network/257313.BP3785 | Pertussis toxin subunit 4 precursor; PTX oligomer B binds to receptors on the eukaryotic cell surface and facilitates the translocation of the toxic subunit across the cell membrane. |
| ptxE protein network | https://string-db.org/network/257313.BP3786 | Pertussis toxin subunit 5 precursor; PTX oligomer B binds to receptors on the eukaryotic cell surface and facilitates the translocation of the toxic subunit across the cell membrane. |
| ptxC protein network | https://string-db.org/network/257313.BP3787 | Pertussis toxin subunit 3 precursor; PTX oligomer B binds to receptors on the eukaryotic cell surface and facilitates the translocation of the toxic subunit across the cell membrane. |
| ptlA protein network | https://string-db.org/network/257313.BP3788 | Pertussis toxin transport protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlB protein network | https://string-db.org/network/257313.BP3789 | Pertussis toxin transport protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlC protein network | https://string-db.org/network/257313.BP3790 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl essential for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlD protein network | https://string-db.org/network/257313.BP3791 | Putative membrane protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlI protein network | https://string-db.org/network/257313.BP3792 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlE protein network | https://string-db.org/network/257313.BP3793 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. Could possess pept [...] |
| ptlF protein network | https://string-db.org/network/257313.BP3794 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane; Belongs to the Trb [...] |
| ptlG protein network | https://string-db.org/network/257313.BP3795 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| ptlH protein network | https://string-db.org/network/257313.BP3796 | Putative bacterial secretion system protein; Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane. |
| BP3797 protein network | https://string-db.org/network/257313.BP3797 | Putative membrane protein; Similar to Escherichia coli probable amino acid metabolite efflux pump EamA SW:EAMA_ECOLI (P31125) (299 aa) fasta scores: E(): 2.9e-09, 27.39% id in 303 aa, and to Pseu [...] |
| BP3798 protein network | https://string-db.org/network/257313.BP3798 | AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator PA3898 TR:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 1.4e-56, 53.1% id in 290 aa, and [...] |
| BP3799 protein network | https://string-db.org/network/257313.BP3799 | Similar to Rhizobium meliloti hypothetical protein SMC03833 TR:CAC47795 (EMBL:AL591793) (125 aa) fasta scores: E(): 8.8e-09, 40.18% id in 107 aa, and to Rhizobium loti hypothetical protein MLR435 [...] |
| BP3800 protein network | https://string-db.org/network/257313.BP3800 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0345 TR:Q9I6E8 (EMBL:AE004472) (461 aa) fasta scores: E(): 1.1e-68, 49.78% id in 460 aa, and to Neisseria menin [...] |
| BP3801 protein network | https://string-db.org/network/257313.BP3801 | Similar to Pseudomonas aeruginosa hypothetical protein PA0344 TR:Q9I6E9 (EMBL:AE004472) (459 aa) fasta scores: E(): 6.6e-91, 58.07% id in 458 aa, and to Neisseria meningitidis hypothetical protei [...] |
| BP3802 protein network | https://string-db.org/network/257313.BP3802 | Putative extracellular solute-binding protein; Similar to Rhodobacter sphaeroides f. sp. denitrificans dipeptide transport protein DppA TR:Q9F1X4 (EMBL:AB036425) (533 aa) fasta scores: E(): 7.6e- [...] |
| BP3803 protein network | https://string-db.org/network/257313.BP3803 | Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 3.4e-37, 38% id in 321 aa, and to Agrobacterium tumefaciens AGR [...] |
| BP3804 protein network | https://string-db.org/network/257313.BP3804 | Similar to Escherichia coli dipeptide transport system permease protein DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 6.7e-20, 39.79% id in 294 aa, and to Agrobacterium tumefaciens AGR_ [...] |
| BP3806 protein network | https://string-db.org/network/257313.BP3806 | N-terminal region of a probable ABC transporter, ATP-binding protein (Pseudogene); ScanRegExp hit to PS00017, ATP/GTP-binding site motif A (P-loop). |
| argJ protein network | https://string-db.org/network/257313.BP3807 | Arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acety [...] |
| BP3808 protein network | https://string-db.org/network/257313.BP3808 | Similar to Neisseria meningitidis hypothetical protein NMA1415 TR:Q9JUA7 (EMBL:AL162755) (287 aa) fasta scores: E(): 6.7e-54, 56.38% id in 282 aa, and to Pseudomonas aeruginosa hypothetical prote [...] |
| BP3809 protein network | https://string-db.org/network/257313.BP3809 | Conserved hypothetical protein; N-terminus is similar to Proteus vulgaris mutator protein MutT SW:MUTT_PROVU (P32090) (112 aa) fasta scores: E(): 6.6e-08, 43.15% id in 95 aa, and to Xylella fasti [...] |
| BP3810 protein network | https://string-db.org/network/257313.BP3810 | Transposase for IS1002 element. |
| BP3811 protein network | https://string-db.org/network/257313.BP3811 | Transposase for IS481 element. |
| BP3812 protein network | https://string-db.org/network/257313.BP3812 | Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM SW:OPRM_PSEAE (Q51487) (485 aa) fasta scores: E(): 2.1e-35, 32.58% id in 488 aa, and to Pseudomonas aeruginosa probable out [...] |
| BP3813 protein network | https://string-db.org/network/257313.BP3813 | AcrB/AcrD/AcrF family protein; Similar to Escherichia coli hypothetical protein YegO SW:YEGO_ECOLI (P76399) (1025 aa) fasta scores: E(): 0, 60.8% id in 1023 aa, and to Pseudomonas aeruginosa prob [...] |
| BP3814 protein network | https://string-db.org/network/257313.BP3814 | AcrB/AcrD/AcrF family protein; Similar to Pseudomonas aeruginosa probable RND efflux transporter PA1436 TR:Q9I3R1 (EMBL:AE004573) (1036 aa) fasta scores: E(): 1.2e-171, 50.49% id in 1016 aa, and [...] |
| BP3815 protein network | https://string-db.org/network/257313.BP3815 | HlyD family secretion protein; Similar to Pseudomonas aeruginosa probable RND efflux membrane fusion protein precursor PA2528 TR:Q9I0V5 (EMBL:AE004680) (426 aa) fasta scores: E(): 1.6e-64, 51.74% [...] |
| zapD protein network | https://string-db.org/network/257313.BP3816 | Conserved hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase a [...] |
| coaE protein network | https://string-db.org/network/257313.BP3817 | Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. |
| BP3818 protein network | https://string-db.org/network/257313.BP3818 | Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. |
| BP3819 protein network | https://string-db.org/network/257313.BP3819 | Hypothetical protein; Poor database matches. Weakly similar to Vibrio cholerae lipoprotein VC1962 TR:Q9KQN6 (EMBL:AE004271) (163 aa) fasta scores: E(): 0.065, 28.36% id in 141 aa. |
| BP3820 protein network | https://string-db.org/network/257313.BP3820 | Putative regulatory protein; Similar to the C-terminal regions of Salmonella typhimurium transcriptional regulatory protein UhpA SW:UHPA_SALTY (P27667) (196 aa) fasta scores: E(): 2.6e-05, 47.29% [...] |
| panC protein network | https://string-db.org/network/257313.BP3821 | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase f [...] |
| BP3822 protein network | https://string-db.org/network/257313.BP3822 | Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from m [...] |
| BP3823 protein network | https://string-db.org/network/257313.BP3823 | Similar to Burkholderia solanacearum conserved hypothetical protein RSC2385 TR:CAD16092 (EMBL:AL646069) (62 aa) fasta scores: E(): 3.7e-09, 58.33% id in 60 aa, and to Neisseria meningitidis hypot [...] |
| BP3824 protein network | https://string-db.org/network/257313.BP3824 | Putative membrane protein; Similar to Escherichia coli multidrug resistance protein B EmrB SW:EMRB_ECOLI (P27304) (512 aa) fasta scores: E(): 1.5e-26, 28.46% id in 411 aa, and to Rhizobium loti p [...] |
| glpK protein network | https://string-db.org/network/257313.BP3825 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. |
| BP3826 protein network | https://string-db.org/network/257313.BP3826 | Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0661 TR:Q9I5R0 (EMBL:AE004501) (140 aa) fasta scores: E(): 1.7e-05, 31.46% id in 143 aa, and to Rhizobium loti [...] |
| BP3827 protein network | https://string-db.org/network/257313.BP3827 | Putative exported protein; Similar to Rhizobium meliloti hypothetical protein SMA1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-48, 44.61% id in 334 aa, and to Agrobacterium tume [...] |
| BP3828 protein network | https://string-db.org/network/257313.BP3828 | Similar to Rhizobium leguminosarum general L-amino acid transport ATP-binding protein AapP SW:AAPP_RHILV (Q52815) (257 aa) fasta scores: E(): 1.7e-67, 77.95% id in 245 aa, and to Pseudomonas marg [...] |
| BP3829 protein network | https://string-db.org/network/257313.BP3829 | Similar to Rhizobium leguminosarum general L-amino acid transport system permease protein AapM SW:AAPM_RHILV (Q52814) (384 aa) fasta scores: E(): 1.8e-59, 49.32% id in 369 aa, and to Pseudomonas [...] |
| BP3830 protein network | https://string-db.org/network/257313.BP3830 | Similar to Rhizobium leguminosarum general L-amino acid transport system permease protein AapQ SW:AAPQ_RHILV (Q52813) (400 aa) fasta scores: E(): 5.1e-67, 50.52% id in 378 aa, and to Vibrio chole [...] |
| BP3831 protein network | https://string-db.org/network/257313.BP3831 | Similar to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein precursor AapJ SW:AAPJ_RHILV (Q52812) (341 aa) fasta scores: E(): 1.1e-74, 55.75% id in 339 aa, and to Vibrio c [...] |
| ftsE protein network | https://string-db.org/network/257313.BP3832 | Similar to Escherichia coli cell division ATP-binding protein FtsE SW:FTSE_ECOLI (P10115) (222 aa) fasta scores: E(): 9e-36, 50.9% id in 220 aa, and to Neisseria meningitidis ABC transporter ATP- [...] |
| BP3833 protein network | https://string-db.org/network/257313.BP3833 | Putative permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. |
| cheD protein network | https://string-db.org/network/257313.BP3834 | Conserved hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD f [...] |
| mutY protein network | https://string-db.org/network/257313.BP3836 | Putative pyruvate ferredoxin/flavodoxin oxidoreductase (pseudogene); Adenine glycosylase active on G-A mispairs. |
| BP3837 protein network | https://string-db.org/network/257313.BP3837 | Similar to Rhizobium loti hypothetical protein MLL1636 TR:Q98K51 (EMBL:AP002997) (290 aa) fasta scores: E(): 5.6e-33, 36.12% id in 263 aa, and to Streptomyces coelicolor putative DNA-binding prot [...] |
| BP3838 protein network | https://string-db.org/network/257313.BP3838 | ubiE/COQ5 methyltransferase family protein; Similar to Erwinia herbicola biotin synthesis protein BioC SW:BIOC_ERWHE (O06898) (251 aa) fasta scores: E(): 9.1e-07, 31.4% id in 207 aa. C-terminal r [...] |
| BP3839 protein network | https://string-db.org/network/257313.BP3839 | Transposase for IS481 element. |
| BP3841 protein network | https://string-db.org/network/257313.BP3841 | Conserved hypothetical protein (pseudogene); HMMPfam hit to PF02515, CAIB/BAIF family; Belongs to the CoA-transferase III family. |
| BP3842 protein network | https://string-db.org/network/257313.BP3842 | Hypothetical protein; Similar to Salmonella typhimurium 2-methylcitrate dehydratase PrpD SW:PRPD_SALTY (P74840) (483 aa) fasta scores: E(): 1.3e-07, 24.77% id in 436 aa, and to Agrobacterium tume [...] |
| BP3843 protein network | https://string-db.org/network/257313.BP3843 | Putative lipoprotein; Similar to Comamonas testosteroni hypothetical protein Orf4 TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 1.6e-32, 35.87% id in 315 aa, and to Pseudomonas putida hyp [...] |
| BP3844 protein network | https://string-db.org/network/257313.BP3844 | Putative enoyl-CoA hydratase/isomerase; Similar to Archaeoglobus fulgidus enoyl-CoA hydratase AF0963 TR:O29299 (EMBL:AE001038) (259 aa) fasta scores: E(): 1.4e-25, 36.51% id in 241 aa, and to Bac [...] |
| BP3845 protein network | https://string-db.org/network/257313.BP3845 | Nitroreductase family protein; Similar to Burkholderia solanacearum probable oxidoreductase protein RSC1608 TR:CAD15310 (EMBL:AL646065) (235 aa) fasta scores: E(): 1.5e-35, 44.73% id in 228 aa, a [...] |
| BP3846 protein network | https://string-db.org/network/257313.BP3846 | Similar to Mycobacterium tuberculosis CDC1551 TetR family transcriptional regulator MT2581 TR:AAK46885 (EMBL:AE007094) (231 aa) fasta scores: E(): 1.1e-05, 28.77% id in 212 aa, and to Pseudomonas [...] |
| BP3847 protein network | https://string-db.org/network/257313.BP3847 | Similar to Homo sapiens mitochondrial hydroxymethylglutaryl-CoA lyase precursor HMGCL SW:HMGL_HUMAN (P35914) (325 aa) fasta scores: E(): 4.7e-18, 35.94% id in 306 aa, and to Pseudomonas mevalonii [...] |
| BP3848 protein network | https://string-db.org/network/257313.BP3848 | Putative enoyl-CoA hydratase/isomerase; Similar to Mus musculus AU-binding enoyl-CoA hydratase AUH TR:Q9JLZ3 (EMBL:AF118386) (314 aa) fasta scores: E(): 4.3e-15, 30.15% id in 262 aa, and to Mycob [...] |
| BP3849 protein network | https://string-db.org/network/257313.BP3849 | Conserved hypothetical protein; Similar to Agrobacterium tumefaciens AGR_C_3858p TR:AAK87874 (EMBL:AE008129) (419 aa) fasta scores: E(): 8.2e-40, 34.09% id in 393 aa, and to Rhizobium meliloti pu [...] |
| BP3851 protein network | https://string-db.org/network/257313.BP3851 | Putative lipoprotein (pseudogene); PS00013 Prokaryotic membrane lipoprotein lipid attachment site. |
| katA protein network | https://string-db.org/network/257313.BP3852 | Catalase; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. |
| BP3853 protein network | https://string-db.org/network/257313.BP3853 | ABC transporter permease protein; Similar to Escherichia coli putative aliphatic sulfonates transport permease protein SsuC SW:SSUC_ECOLI (P75851) (263 aa) fasta scores: E(): 2.5e-17, 29.48% id i [...] |
| BP3854 protein network | https://string-db.org/network/257313.BP3854 | ABC transporter ATP-binding protein; Similar to Klebsiella pneumoniae nitrate transport protein NasD SW:NASD_KLEPN (P39459) (262 aa) fasta scores: E(): 2.4e-27, 42.15% id in 223 aa, and to Pseudo [...] |
| BP3855 protein network | https://string-db.org/network/257313.BP3855 | Putative periplasmic protein; Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA SW:TAUA_ECOLI (Q47537) (320 aa) fasta scores: E(): 7.6, 23.31% id in 296 aa, and to Ps [...] |
| BP3856 protein network | https://string-db.org/network/257313.BP3856 | Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD SW:TAUD_ECOLI (P37610) (282 aa) fasta scores: E(): 4.2e-34, 40.2% id in 291 aa, and to Pseudomonas aeruginosa hy [...] |
| BP3857 protein network | https://string-db.org/network/257313.BP3857 | Putative hydrolase; Similar to Campylobacter jejuni hippurate hydrolase HipO SW:HIPO_CAMJE (P45493) (383 aa) fasta scores: E(): 9.4e-51, 42.17% id in 396 aa, and to Pseudomonas aeruginosa probabl [...] |
| BP3858 protein network | https://string-db.org/network/257313.BP3858 | Similar to Bacillus subtilis oligopeptide transport ATP-binding protein AppF SW:APPF_BACSU (P42065) (329 aa) fasta scores: E(): 6.9e-50, 51.86% id in 295 aa, and to Agrobacterium tumefaciens AGR_ [...] |
| BP3859 protein network | https://string-db.org/network/257313.BP3859 | Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppD SW:OPPD_SALTY (P04285) (335 aa) fasta scores: E(): 1.8e-49, 47.44% id in 333 aa, and to Agrobacterium tumefaciens [...] |
| BP3860 protein network | https://string-db.org/network/257313.BP3860 | Similar to Escherichia coli dipeptide transport system permease protein DppC SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 5.4e-40, 40.33% id in 295 aa, and to Agrobacterium tumefaciens AGR_ [...] |
| BP3861 protein network | https://string-db.org/network/257313.BP3861 | Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 1.6e-38, 37.18% id in 320 aa, and to Agrobacterium tumefaciens [...] |
| BP3862 protein network | https://string-db.org/network/257313.BP3862 | Putative extracellular solute-binding protein; Similar to Escherichia coli nickel-binding periplasmic protein precursor NikA SW:NIKA_ECOLI (P33590) (524 aa) fasta scores: E(): 1.2e-24, 26.8% id i [...] |
| trmE protein network | https://string-db.org/network/257313.BP3863 | Putative tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certa [...] |
| BP3864 protein network | https://string-db.org/network/257313.BP3864 | Putative membrane protein; Similar to an internal region of Rattus norvegicus monocarboxylate transporter 4 MCT4 SW:MOT4_RAT (O35910) (471 aa) fasta scores: E(): 0.002, 24.23% id in 425 aa, and t [...] |
| BP3865 protein network | https://string-db.org/network/257313.BP3865 | Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SW:TCTD_SALTY (P22104) (224 aa) fasta scores: E(): 2. [...] |
| BP3866 protein network | https://string-db.org/network/257313.BP3866 | Two-component regulatory system family, sensor kinase protein. Similar to Burkholderia solanacearum putative transmembrane sensor kinase transcription regulator protein RSC2936 TR:CAD16643 (EMBL: [...] |
| BP3867 protein network | https://string-db.org/network/257313.BP3867 | Putative exported protein; Similar to Salmonella enterica hypothetical protein TctC TR:Q9FA46 (EMBL:AF020810) (325 aa) fasta scores: E(): 3.2e-76, 63.93% id in 305 aa, and to Pseudomonas aerugino [...] |
| BP3868 protein network | https://string-db.org/network/257313.BP3868 | Putative membrane protein; Similar to Salmonella enterica hypothetical protein TctB TR:Q9FA45 (EMBL:AF020810) (144 aa) fasta scores: E(): 2.2e-15, 37.14% id in 140 aa, and to Pseudomonas aerugino [...] |
| BP3869 protein network | https://string-db.org/network/257313.BP3869 | Putative tricarboxylic transport membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0752 TR:Q9I5H7 (EMBL:AE004510) (505 aa) fasta scores: E(): 1.9e-113, 62.72% id in 499 a [...] |
| BP3870 protein network | https://string-db.org/network/257313.BP3870 | Similar to aminotransferases from prokaryotes and eukaryotes, for example, Rattus norvegicus multifunctional aminotransferase TR:Q08415 (EMBL:Z49696) (457 aa) fasta scores: E(): 1.6e-32, 33.09% i [...] |
| BP3871 protein network | https://string-db.org/network/257313.BP3871 | Similar to Escherichia coli cold shock-like protein CspC SW:CSPC_ECOLI (P36996) (68 aa) fasta scores: E(): 1.1e-14, 62.9% id in 62 aa, and to Salmonella typhimurium cold shock protein CspA SW:CSP [...] |