Organism Overview: Thermomicrobium roseum


 
trd_0002 protein networkhttps://string-db.org/network/309801.trd_0002DNA polymerase III tau and gamma subunits; Identified by match to protein family HMM TIGR00678.
trd_0003 protein networkhttps://string-db.org/network/309801.trd_0003Hypothetical protein; Identified by glimmer; putative.
trd_0004 protein networkhttps://string-db.org/network/309801.trd_0004Hypothetical protein; Identified by glimmer; putative.
trd_0005 protein networkhttps://string-db.org/network/309801.trd_0005Tetratricopeptide repeat family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...]
trd_0006 protein networkhttps://string-db.org/network/309801.trd_0006Threonine ammonia-lyase, biosynthetic; Identified by match to protein family HMM PF00291.
trd_0007 protein networkhttps://string-db.org/network/309801.trd_0007Hypothetical protein; Identified by glimmer; putative.
trd_0009 protein networkhttps://string-db.org/network/309801.trd_0009Hypothetical protein; Identified by glimmer; putative.
pyrF protein networkhttps://string-db.org/network/309801.trd_0010Orotidine 5'-phosphate decarboxylase; Identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; Belongs to the OMP decarboxylase family. Type 2 subfamily.
trd_0011 protein networkhttps://string-db.org/network/309801.trd_0011Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382.
trd_0012 protein networkhttps://string-db.org/network/309801.trd_0012Putative membrane protein.
trd_0013 protein networkhttps://string-db.org/network/309801.trd_0013Probable transport ATP-binding protein; Identified by match to protein family HMM PF00005.
trmH protein networkhttps://string-db.org/network/309801.trd_0014tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransf [...]
trd_0015 protein networkhttps://string-db.org/network/309801.trd_0015Hypothetical protein; Identified by glimmer; putative.
cas6 protein networkhttps://string-db.org/network/309801.trd_0016CRISPR-associated protein Cas6; Identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877.
trd_0017 protein networkhttps://string-db.org/network/309801.trd_0017Hypothetical protein; Identified by glimmer; putative.
cst2 protein networkhttps://string-db.org/network/309801.trd_0018CRISPR-associated regulatory protein, DevR family; Identified by match to protein family HMM TIGR01875; match to protein family HMM TIGR02585.
cas5t protein networkhttps://string-db.org/network/309801.trd_0019CRISPR-associated protein Cas5, Tneap subtype; Identified by match to protein family HMM TIGR01895; match to protein family HMM TIGR02593.
cas3 protein networkhttps://string-db.org/network/309801.trd_0020CRISPR-associated helicase Cas3 domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR01587.
cas4 protein networkhttps://string-db.org/network/309801.trd_0021CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, t [...]
cas1 protein networkhttps://string-db.org/network/309801.trd_0022CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...]
trd_0023 protein networkhttps://string-db.org/network/309801.trd_0023Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF02769.
cas2 protein networkhttps://string-db.org/network/309801.trd_0024CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...]
pdxT protein networkhttps://string-db.org/network/309801.trd_0025Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is ch [...]
pdxS protein networkhttps://string-db.org/network/309801.trd_0026Pyridoxine biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT [...]
trd_0027 protein networkhttps://string-db.org/network/309801.trd_0027Aminotransferase, class I and II; Identified by match to protein family HMM PF00155.
trd_0028 protein networkhttps://string-db.org/network/309801.trd_0028Hypothetical protein; Identified by glimmer; putative.
trd_0029 protein networkhttps://string-db.org/network/309801.trd_0029Hypothetical protein; Identified by glimmer; putative.
glmU protein networkhttps://string-db.org/network/309801.trd_0031UDP-N-acetylglucosamine synthesis bifunctional protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal d [...]
prs protein networkhttps://string-db.org/network/309801.trd_0032Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
trd_0033 protein networkhttps://string-db.org/network/309801.trd_0033Magnesium and cobalt efflux protein corC; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471.
trd_0034 protein networkhttps://string-db.org/network/309801.trd_0034N5,N10-methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296.
trd_0035 protein networkhttps://string-db.org/network/309801.trd_0035BirA protein; Identified by match to protein family HMM PF03099.
trd_0036 protein networkhttps://string-db.org/network/309801.trd_0036Putative cellulose-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model m [...]
trd_0037 protein networkhttps://string-db.org/network/309801.trd_0037Hypothetical protein; Identified by glimmer; putative.
trd_0038 protein networkhttps://string-db.org/network/309801.trd_0038Hypothetical protein; Identified by glimmer; putative.
trd_0039 protein networkhttps://string-db.org/network/309801.trd_0039acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
trd_0040 protein networkhttps://string-db.org/network/309801.trd_0040Conserved hypothetical protein; Identified by match to protein family HMM PF00132.
trd_0041 protein networkhttps://string-db.org/network/309801.trd_00413-hydroxybutyryl-CoA dehydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
trd_0042 protein networkhttps://string-db.org/network/309801.trd_0042Electron transfer flavoprotein beta-subunit; Identified by match to protein family HMM PF01012.
trd_0043 protein networkhttps://string-db.org/network/309801.trd_0043Electron transfer flavoprotein alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
trd_0044 protein networkhttps://string-db.org/network/309801.trd_0044Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486; match to protein family HMM PF0 [...]
trd_0045 protein networkhttps://string-db.org/network/309801.trd_0045Identified by match to protein family HMM PF02674.
trd_0046 protein networkhttps://string-db.org/network/309801.trd_0046Hypothetical protein; Identified by glimmer; putative.
trd_0047 protein networkhttps://string-db.org/network/309801.trd_0047Putative acetyltransferase; Identified by match to protein family HMM PF00583.
trd_0048 protein networkhttps://string-db.org/network/309801.trd_0048PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match t [...]
trd_0049 protein networkhttps://string-db.org/network/309801.trd_0049Putative RNA nucleotidyltransferase; Identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; Belongs to the tRNA nucleotidyl [...]
trd_0050 protein networkhttps://string-db.org/network/309801.trd_0050Hypothetical protein; Identified by glimmer; putative.
trd_0051 protein networkhttps://string-db.org/network/309801.trd_0051Hypothetical protein; Identified by glimmer; putative.
trd_0052 protein networkhttps://string-db.org/network/309801.trd_0052Tyrosine recombinase xerC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...]
trd_0053 protein networkhttps://string-db.org/network/309801.trd_0053Hypothetical protein; Identified by glimmer; putative.
trd_0054 protein networkhttps://string-db.org/network/309801.trd_0054Hypothetical protein; Identified by glimmer; putative.
mraZ protein networkhttps://string-db.org/network/309801.trd_0055mraZ protein; Identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; Belongs to the MraZ family.
mraW protein networkhttps://string-db.org/network/309801.trd_0056S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
trd_0057 protein networkhttps://string-db.org/network/309801.trd_0057Hypothetical protein; Identified by glimmer; putative.
trd_0058 protein networkhttps://string-db.org/network/309801.trd_0058Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
murF protein networkhttps://string-db.org/network/309801.trd_0059UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murei [...]
mraY protein networkhttps://string-db.org/network/309801.trd_0060phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murD protein networkhttps://string-db.org/network/309801.trd_0061UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF [...]
ftsW protein networkhttps://string-db.org/network/309801.trd_0062Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family.
murC protein networkhttps://string-db.org/network/309801.trd_0063UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murB protein networkhttps://string-db.org/network/309801.trd_0064UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
ddl protein networkhttps://string-db.org/network/309801.trd_0065D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
trd_0066 protein networkhttps://string-db.org/network/309801.trd_0066Cell division protein ftsQ homolog; Essential cell division protein.
trd_0067 protein networkhttps://string-db.org/network/309801.trd_0067Hypothetical protein; Identified by glimmer; putative.
ftsZ protein networkhttps://string-db.org/network/309801.trd_0068Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
nrdR protein networkhttps://string-db.org/network/309801.trd_0069Transcriptional regulator, NrdR family; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
trd_0070 protein networkhttps://string-db.org/network/309801.trd_0070Hypothetical protein; Identified by glimmer; putative.
trx protein networkhttps://string-db.org/network/309801.trd_0071Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
trd_0072 protein networkhttps://string-db.org/network/309801.trd_0072Putative fructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
trd_0073 protein networkhttps://string-db.org/network/309801.trd_0073Aminopeptidase; Identified by match to protein family HMM PF02225; match to protein family HMM PF04389.
trd_0075 protein networkhttps://string-db.org/network/309801.trd_0075Putative arsenic-efflux pump regulatory protein; Identified by match to protein family HMM PF01022.
trd_0076 protein networkhttps://string-db.org/network/309801.trd_0076Hypothetical protein; Identified by glimmer; putative.
trd_0077 protein networkhttps://string-db.org/network/309801.trd_0077Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
trd_0078 protein networkhttps://string-db.org/network/309801.trd_0078Putative membrane protein.
trd_0079 protein networkhttps://string-db.org/network/309801.trd_0079Putative universal stress protein; Identified by match to protein family HMM PF00582.
trd_0080 protein networkhttps://string-db.org/network/309801.trd_0080Putative integral membrane protein.
trd_0081 protein networkhttps://string-db.org/network/309801.trd_0081Putative integral membrane export protein; Identified by match to protein family HMM PF03741.
trd_0082 protein networkhttps://string-db.org/network/309801.trd_0082alpha-D-1,4-glucosidase; Identified by match to protein family HMM PF00128.
trd_0083 protein networkhttps://string-db.org/network/309801.trd_0083Hypothetical protein; Identified by glimmer; putative.
recG protein networkhttps://string-db.org/network/309801.trd_0084ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
trd_0085 protein networkhttps://string-db.org/network/309801.trd_0085Putative flavin reductase-like protein; Identified by match to protein family HMM PF01613.
trd_0086 protein networkhttps://string-db.org/network/309801.trd_0086Hypothetical protein; Identified by glimmer; putative.
trd_0087 protein networkhttps://string-db.org/network/309801.trd_0087Putative glycosyl transferase; Identified by match to protein family HMM PF00534.
trd_0088 protein networkhttps://string-db.org/network/309801.trd_0088Glycosyltransferase WbpY; Identified by match to protein family HMM PF00534.
rpmB protein networkhttps://string-db.org/network/309801.trd_0089Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
prmC protein networkhttps://string-db.org/network/309801.trd_0090Methyltransferase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to th [...]
prfA protein networkhttps://string-db.org/network/309801.trd_0091Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
trd_0092 protein networkhttps://string-db.org/network/309801.trd_0092Identified by match to protein family HMM TIGR00725.
trd_0093 protein networkhttps://string-db.org/network/309801.trd_00932'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
trd_0094 protein networkhttps://string-db.org/network/309801.trd_0094Hypothetical protein; Identified by glimmer; putative.
pheA protein networkhttps://string-db.org/network/309801.trd_0095P-protein; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
trd_0096 protein networkhttps://string-db.org/network/309801.trd_0096N6-adenine-specific methylase; Identified by match to protein family HMM PF03602; match to protein family HMM PF05175.
coaD protein networkhttps://string-db.org/network/309801.trd_0097Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
trd_0098 protein networkhttps://string-db.org/network/309801.trd_0098Conserved hypothetical protein.
trd_0099 protein networkhttps://string-db.org/network/309801.trd_0099Hypothetical protein; Identified by glimmer; putative.
trd_0100 protein networkhttps://string-db.org/network/309801.trd_0100Putative methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.
trd_0101 protein networkhttps://string-db.org/network/309801.trd_0101Methyl-accepting chemotaxis protein McpL; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...]
trpE protein networkhttps://string-db.org/network/309801.trd_0102Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first [...]
trd_0103 protein networkhttps://string-db.org/network/309801.trd_0103Para-aminobenzoate synthase glutamine amidotransferase component II; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566.
trpD protein networkhttps://string-db.org/network/309801.trd_0104Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...]
trpC protein networkhttps://string-db.org/network/309801.trd_0105Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family.
trpF protein networkhttps://string-db.org/network/309801.trd_0106N-(5'phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family.
trpB protein networkhttps://string-db.org/network/309801.trd_0107Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
trpA protein networkhttps://string-db.org/network/309801.trd_0108Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
aroH protein networkhttps://string-db.org/network/309801.trd_0109Chorismate mutase; Identified by match to protein family HMM PF07736; match to protein family HMM TIGR01796.
aroF protein networkhttps://string-db.org/network/309801.trd_0110Phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361.
rimM protein networkhttps://string-db.org/network/309801.trd_011116S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
hisI protein networkhttps://string-db.org/network/309801.trd_0112Histidine biosynthesis bifunctional protein hisIE; Identified by match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; match to protein [...]
trd_0113 protein networkhttps://string-db.org/network/309801.trd_0113Conserved hypothetical protein; Belongs to the UPF0109 family.
rpsP protein networkhttps://string-db.org/network/309801.trd_0114Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.
trd_0116 protein networkhttps://string-db.org/network/309801.trd_0116acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
trd_0117 protein networkhttps://string-db.org/network/309801.trd_0117Putative pimeloyl-CoA synthetase; Identified by match to protein family HMM PF02629.
trd_0118 protein networkhttps://string-db.org/network/309801.trd_0118Identified by match to protein family HMM PF03061.
trd_0119 protein networkhttps://string-db.org/network/309801.trd_0119Putative transport system periplasmic protein; Identified by match to protein family HMM PF01547.
trd_0120 protein networkhttps://string-db.org/network/309801.trd_0120Putative sarcosine oxidase subunit beta; Identified by match to protein family HMM PF01266.
trd_0121 protein networkhttps://string-db.org/network/309801.trd_0121Rieske 2Fe-2S domain protein; Identified by match to protein family HMM PF00355.
trd_0122 protein networkhttps://string-db.org/network/309801.trd_0122Hypothetical protein; Identified by glimmer; putative.
trd_0123 protein networkhttps://string-db.org/network/309801.trd_0123Putative oxidoreductase protein; Identified by match to protein family HMM PF01266.
trd_0124 protein networkhttps://string-db.org/network/309801.trd_0124Carbon monoxide dehydrogenase subunit G (CoxG) superfamily; Identified by match to protein family HMM PF06240.
trd_0125 protein networkhttps://string-db.org/network/309801.trd_0125Helix-turn-helix, Fis-type; Identified by match to protein family HMM PF07905.
trd_0127 protein networkhttps://string-db.org/network/309801.trd_0127Transposase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged wi [...]
trd_0128 protein networkhttps://string-db.org/network/309801.trd_0128Hypothetical protein; Identified by glimmer; putative.
trd_0129 protein networkhttps://string-db.org/network/309801.trd_0129GntR-family transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
trd_0130 protein networkhttps://string-db.org/network/309801.trd_0130NADP oxidoreductase coenzyme F420-dependent family.
trd_0131 protein networkhttps://string-db.org/network/309801.trd_0131ygbK domain protein; Identified by match to protein family HMM PF07005.
trd_0132 protein networkhttps://string-db.org/network/309801.trd_0132Ribulose bisphosphate carboxylase; Identified by match to protein family HMM PF00016; Belongs to the RuBisCO large chain family.
trd_0133 protein networkhttps://string-db.org/network/309801.trd_0133Probable nadh-dependent dyhydrogenase; Identified by match to protein family HMM PF01408.
trd_0134 protein networkhttps://string-db.org/network/309801.trd_0134Conserved hypothetical protein.
trd_0135 protein networkhttps://string-db.org/network/309801.trd_0135Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
trd_0136 protein networkhttps://string-db.org/network/309801.trd_0136Possible multiple sugar transport system permease protein; Identified by match to protein family HMM PF00528.
trd_0137 protein networkhttps://string-db.org/network/309801.trd_0137Sugar abc transporter, permease protein; Identified by match to protein family HMM PF00528.
trd_0138 protein networkhttps://string-db.org/network/309801.trd_0138Hypothetical protein; Identified by glimmer; putative.
trd_0139 protein networkhttps://string-db.org/network/309801.trd_0139Hypothetical protein; Identified by glimmer; putative.
trd_0140 protein networkhttps://string-db.org/network/309801.trd_0140Putative purple acid phosphatase-like protein; Identified by match to protein family HMM PF00149.
trd_0141 protein networkhttps://string-db.org/network/309801.trd_0141Putative cable pili-associated 22 kDa adhesin protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF00149.
trd_0142 protein networkhttps://string-db.org/network/309801.trd_0142Identified by match to protein family HMM PF03099.
trd_0143 protein networkhttps://string-db.org/network/309801.trd_0143Glycine cleavage system H protein; Similar to mitochondrial precursor; identified by match to protein family HMM PF01597.
gcvH-2 protein networkhttps://string-db.org/network/309801.trd_0144GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
trd_0145 protein networkhttps://string-db.org/network/309801.trd_0145Hypothetical protein; Identified by glimmer; putative.
trd_0146 protein networkhttps://string-db.org/network/309801.trd_0146Hypothetical protein; Identified by glimmer; putative.
trd_0147 protein networkhttps://string-db.org/network/309801.trd_0147Heterodisulfide reductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
trd_0148 protein networkhttps://string-db.org/network/309801.trd_0148Electron transfer flavoprotein alpha-subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
trd_0149 protein networkhttps://string-db.org/network/309801.trd_0149Electron transfer flavoprotein subunit beta; Identified by match to protein family HMM PF01012.
trd_0150 protein networkhttps://string-db.org/network/309801.trd_0150Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
trd_0151 protein networkhttps://string-db.org/network/309801.trd_0151Hypothetical protein; Identified by glimmer; putative.
trd_0152 protein networkhttps://string-db.org/network/309801.trd_0152Conserved hypothetical protein.
trd_0153 protein networkhttps://string-db.org/network/309801.trd_0153CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
trd_0154 protein networkhttps://string-db.org/network/309801.trd_0154Identified by match to protein family HMM PF02754.
trd_0155 protein networkhttps://string-db.org/network/309801.trd_0155Metabolism heterodisulfide reductase C.
trd_0156 protein networkhttps://string-db.org/network/309801.trd_0156thioredoxin:Glutaredoxin:Thioredoxins/glutaredox i n.
trd_0157 protein networkhttps://string-db.org/network/309801.trd_0157Identified by match to protein family HMM PF01597.
trd_0158 protein networkhttps://string-db.org/network/309801.trd_0158Identified by match to protein family HMM PF02635.
trd_0159 protein networkhttps://string-db.org/network/309801.trd_0159Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_0160 protein networkhttps://string-db.org/network/309801.trd_0160Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
trd_0161 protein networkhttps://string-db.org/network/309801.trd_0161Hypothetical protein; Identified by glimmer; putative.
trd_0162 protein networkhttps://string-db.org/network/309801.trd_0162Translin family; Identified by match to protein family HMM PF01997.
trd_0163 protein networkhttps://string-db.org/network/309801.trd_0163Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.
gcvPB protein networkhttps://string-db.org/network/309801.trd_0164Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...]
trd_0165 protein networkhttps://string-db.org/network/309801.trd_0165Hypothetical Membrane Spanning Protein; Identified by match to protein family HMM PF07136.
argH protein networkhttps://string-db.org/network/309801.trd_0166Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.
argA protein networkhttps://string-db.org/network/309801.trd_0167Putative acetyltransferase; Identified by match to protein family HMM PF00583.
lipA protein networkhttps://string-db.org/network/309801.trd_0168Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...]
trd_0169 protein networkhttps://string-db.org/network/309801.trd_0169Putative DNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08148.
lipB protein networkhttps://string-db.org/network/309801.trd_0170Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
trd_0171 protein networkhttps://string-db.org/network/309801.trd_0171Identified by match to protein family HMM PF00534.
thiL protein networkhttps://string-db.org/network/309801.trd_0172Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thi [...]
trd_0173 protein networkhttps://string-db.org/network/309801.trd_0173glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
trd_0174 protein networkhttps://string-db.org/network/309801.trd_0174Uncharacterized P-loop hydrolase UPF0079; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.
trd_0175 protein networkhttps://string-db.org/network/309801.trd_0175Putative glycoprotease family; Identified by match to protein family HMM PF00814.
trd_0176 protein networkhttps://string-db.org/network/309801.trd_0176Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575.
tsaD protein networkhttps://string-db.org/network/309801.trd_0177O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in t [...]
trd_0178 protein networkhttps://string-db.org/network/309801.trd_0178Inositol-1-monophosphatase; Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.
trd_0179 protein networkhttps://string-db.org/network/309801.trd_0179Identified by match to protein family HMM PF00850.
hisH protein networkhttps://string-db.org/network/309801.trd_0180Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydroly [...]
hisA protein networkhttps://string-db.org/network/309801.trd_0181Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007.
trd_0182 protein networkhttps://string-db.org/network/309801.trd_0182Conserved hypothetical protein.
hisF protein networkhttps://string-db.org/network/309801.trd_0183Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that p [...]
trd_0184 protein networkhttps://string-db.org/network/309801.trd_0184Cell wall-associated hydrolases; Identified by match to protein family HMM PF00877; match to protein family HMM PF08239.
trd_0185 protein networkhttps://string-db.org/network/309801.trd_0185Hypothetical protein; Identified by glimmer; putative.
trd_0186 protein networkhttps://string-db.org/network/309801.trd_0186Putative permease.
trd_0187 protein networkhttps://string-db.org/network/309801.trd_0187Putative ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
recA protein networkhttps://string-db.org/network/309801.trd_0188recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
trd_0189 protein networkhttps://string-db.org/network/309801.trd_0189Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153.
trd_0190 protein networkhttps://string-db.org/network/309801.trd_0190ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
trd_0191 protein networkhttps://string-db.org/network/309801.trd_0191Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.
trd_0192 protein networkhttps://string-db.org/network/309801.trd_0192Hypothetical protein; Identified by glimmer; putative.
trd_0193 protein networkhttps://string-db.org/network/309801.trd_0193Prenyltransferase and squalene oxidase repeat domain protein.
trd_0194 protein networkhttps://string-db.org/network/309801.trd_01941,3-propanediol dehydrogenase; Identified by match to protein family HMM PF00465.
trd_0195 protein networkhttps://string-db.org/network/309801.trd_0195Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formati [...]
recO protein networkhttps://string-db.org/network/309801.trd_0196DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
trd_0197 protein networkhttps://string-db.org/network/309801.trd_0197Putative aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM PF01791; match to protein family HMM PF02581; match to protein family HMM TIGR01182.
trd_0198 protein networkhttps://string-db.org/network/309801.trd_0198Conserved hypothetical protein.
nadK protein networkhttps://string-db.org/network/309801.trd_0199Putative NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'- [...]
trd_0200 protein networkhttps://string-db.org/network/309801.trd_0200Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153.
tmk protein networkhttps://string-db.org/network/309801.trd_0201Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
trd_0202 protein networkhttps://string-db.org/network/309801.trd_0202Identified by match to protein family HMM PF01424.
trd_0203 protein networkhttps://string-db.org/network/309801.trd_0203Hypothetical protein; Identified by glimmer; putative.
recR protein networkhttps://string-db.org/network/309801.trd_0204Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
trd_0205 protein networkhttps://string-db.org/network/309801.trd_0205DNA translocase ftsK; Identified by match to protein family HMM PF01580.
trd_0206 protein networkhttps://string-db.org/network/309801.trd_0206Phage DNA polymerase-related protein; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.
trd_0207 protein networkhttps://string-db.org/network/309801.trd_0207DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM TIGR0 [...]
trd_0208 protein networkhttps://string-db.org/network/309801.trd_0208Hypothetical protein; Identified by glimmer; putative.
pyrE protein networkhttps://string-db.org/network/309801.trd_0209Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
ligA protein networkhttps://string-db.org/network/309801.trd_0210DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...]
trd_0211 protein networkhttps://string-db.org/network/309801.trd_0211Vacuolar cation/proton exchanger 1a; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
carB protein networkhttps://string-db.org/network/309801.trd_0212Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family H [...]
carA protein networkhttps://string-db.org/network/309801.trd_0213Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA fam [...]
pyrC protein networkhttps://string-db.org/network/309801.trd_0214Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
maf protein networkhttps://string-db.org/network/309801.trd_0215Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nu [...]
rumA protein networkhttps://string-db.org/network/309801.trd_021623S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I- [...]
speH protein networkhttps://string-db.org/network/309801.trd_0217S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of th [...]
speE protein networkhttps://string-db.org/network/309801.trd_0218Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermid [...]
trd_0219 protein networkhttps://string-db.org/network/309801.trd_0219Conserved hypothetical protein.
trd_0220 protein networkhttps://string-db.org/network/309801.trd_0220Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
trd_0221 protein networkhttps://string-db.org/network/309801.trd_0221Putative permease domain protein; Identified by match to protein family HMM PF02687.
trd_0222 protein networkhttps://string-db.org/network/309801.trd_0222Hypothetical protein; Identified by glimmer; putative.
trd_0223 protein networkhttps://string-db.org/network/309801.trd_0223Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.
trd_0224 protein networkhttps://string-db.org/network/309801.trd_0224Putative ABC superfamily (atp&memb) transport protein; Identified by match to protein family HMM PF00005.
trd_0225 protein networkhttps://string-db.org/network/309801.trd_0225Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
trmD protein networkhttps://string-db.org/network/309801.trd_0226tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
trd_0227 protein networkhttps://string-db.org/network/309801.trd_0227HD domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
trd_0228 protein networkhttps://string-db.org/network/309801.trd_0228Hypothetical protein; Identified by glimmer; putative.
rfbB protein networkhttps://string-db.org/network/309801.trd_0229dTDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; mat [...]
trd_0230 protein networkhttps://string-db.org/network/309801.trd_0230Putative Stage II sporulation protein E (SpoIIE); Identified by match to protein family HMM PF07228.
trd_0231 protein networkhttps://string-db.org/network/309801.trd_0231Conserved hypothetical protein.
trd_0232 protein networkhttps://string-db.org/network/309801.trd_0232Putative oligopeptide-binding protein; Identified by match to protein family HMM PF00496.
trd_0233 protein networkhttps://string-db.org/network/309801.trd_0233Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
aroC protein networkhttps://string-db.org/network/309801.trd_0234Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
aroA protein networkhttps://string-db.org/network/309801.trd_02353-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
trd_0236 protein networkhttps://string-db.org/network/309801.trd_0236dTDP-4-dehydrorhamnose 3,5-epimerase.
trd_0237 protein networkhttps://string-db.org/network/309801.trd_0237Putative S-adenosylmethionine (SAM)-dependent methyltransferase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242.
smpB protein networkhttps://string-db.org/network/309801.trd_0238SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
trd_0240 protein networkhttps://string-db.org/network/309801.trd_0240Hypothetical protein; Identified by glimmer; putative.
trd_0241 protein networkhttps://string-db.org/network/309801.trd_0241Hypothetical protein; Identified by glimmer; putative.
trd_0242 protein networkhttps://string-db.org/network/309801.trd_0242Conserved hypothetical protein; Identified by match to protein family HMM PF01878.
trd_0243 protein networkhttps://string-db.org/network/309801.trd_0243Hypothetical protein; Identified by glimmer; putative.
trd_0244 protein networkhttps://string-db.org/network/309801.trd_0244Conserved hypothetical protein.
trd_0245 protein networkhttps://string-db.org/network/309801.trd_0245Identified by match to protein family HMM PF04909.
trd_0246 protein networkhttps://string-db.org/network/309801.trd_0246D-threo-aldose 1-dehydrogenase; Identified by match to protein family HMM PF00248.
trd_0247 protein networkhttps://string-db.org/network/309801.trd_0247Protein of unknown function (DUF718) superfamily; Identified by match to protein family HMM PF05336.
trd_0248 protein networkhttps://string-db.org/network/309801.trd_0248Putative dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.
trd_0249 protein networkhttps://string-db.org/network/309801.trd_0249Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528.
trd_0250 protein networkhttps://string-db.org/network/309801.trd_0250Transporter; Identified by match to protein family HMM PF00528.
trd_0251 protein networkhttps://string-db.org/network/309801.trd_0251Putative ABC transporter solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
trd_0252 protein networkhttps://string-db.org/network/309801.trd_0252Transcriptional regulator, IclR family, C-terminal domain protein; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339.
trd_0253 protein networkhttps://string-db.org/network/309801.trd_0253Hypothetical protein; Identified by glimmer; putative.
trd_0254 protein networkhttps://string-db.org/network/309801.trd_0254Conserved hypothetical protein.
trd_0255 protein networkhttps://string-db.org/network/309801.trd_0255Hypothetical protein; Identified by glimmer; putative.
trd_0256 protein networkhttps://string-db.org/network/309801.trd_0256Hypothetical protein; Identified by glimmer; putative.
trd_0257 protein networkhttps://string-db.org/network/309801.trd_0257Putative amino acid ABC transporter, periplasmic amino-acid binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may nee [...]
trd_0258 protein networkhttps://string-db.org/network/309801.trd_0258Hypothetical protein; Identified by glimmer; putative.
trd_0259 protein networkhttps://string-db.org/network/309801.trd_0259Putative ABC transport system, substrate-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or th [...]
trd_0260 protein networkhttps://string-db.org/network/309801.trd_0260Glycolate oxidase subunit glcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
trd_0261 protein networkhttps://string-db.org/network/309801.trd_0261Glycolate oxidase subunit glcE; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
trd_0262 protein networkhttps://string-db.org/network/309801.trd_02624Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function, cysteine-rich region; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
trd_0263 protein networkhttps://string-db.org/network/309801.trd_0263Hypothetical protein; Identified by glimmer; putative.
trd_0264 protein networkhttps://string-db.org/network/309801.trd_0264Acylamino-acid-releasing enzyme (ec) (acyl-peptide hydrolase) (aph); Identified by match to protein family HMM PF00326; match to protein family HMM PF01738; match to protein family HMM PF07676.
sbcD protein networkhttps://string-db.org/network/309801.trd_0265Putative nuclease SbcCD, D subunit subfamily; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The [...]
trd_0266 protein networkhttps://string-db.org/network/309801.trd_0266Domain of unknown function domain protein; Identified by match to protein family HMM PF01935.
trd_0267 protein networkhttps://string-db.org/network/309801.trd_0267Probable two component sensor kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07568.
trd_0268 protein networkhttps://string-db.org/network/309801.trd_0268Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106.
trd_0269 protein networkhttps://string-db.org/network/309801.trd_0269Putative aminopeptidase from family M42; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343.
trd_0270 protein networkhttps://string-db.org/network/309801.trd_0270Hypothetical protein; Identified by glimmer; putative.
trd_0271 protein networkhttps://string-db.org/network/309801.trd_0271Hypothetical protein; Identified by glimmer; putative.
trd_0272 protein networkhttps://string-db.org/network/309801.trd_0272Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.
trd_0273 protein networkhttps://string-db.org/network/309801.trd_0273Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.
trd_0274 protein networkhttps://string-db.org/network/309801.trd_0274Putative membrane protein; Identified by match to protein family HMM PF07907.
trd_0275 protein networkhttps://string-db.org/network/309801.trd_0275methylated-DNA-[protein]-cysteine S-methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the c [...]
trd_0276 protein networkhttps://string-db.org/network/309801.trd_0276methylated-DNA--protein-cysteine methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curr [...]
trd_0277 protein networkhttps://string-db.org/network/309801.trd_0277Putative integral membrane protein; Identified by match to protein family HMM PF01694.
trd_0278 protein networkhttps://string-db.org/network/309801.trd_0278Hypothetical protein; Identified by glimmer; putative.
trd_0279 protein networkhttps://string-db.org/network/309801.trd_0279Hypothetical protein; Identified by glimmer; putative.
trd_0280 protein networkhttps://string-db.org/network/309801.trd_0280Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702.
trd_0281 protein networkhttps://string-db.org/network/309801.trd_0281Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
trd_0282 protein networkhttps://string-db.org/network/309801.trd_0282Putative integral membrane protein; Identified by match to protein family HMM PF00892.
trd_0283 protein networkhttps://string-db.org/network/309801.trd_0283Identified by match to protein family HMM PF00753.
trd_0284 protein networkhttps://string-db.org/network/309801.trd_0284Curved DNA-binding protein; Identified by match to protein family HMM PF00226.
trd_0285 protein networkhttps://string-db.org/network/309801.trd_0285Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
trd_0286 protein networkhttps://string-db.org/network/309801.trd_0286Putative lipoprotein.
trd_0287 protein networkhttps://string-db.org/network/309801.trd_0287Hypothetical protein; Identified by glimmer; putative.
trd_0288 protein networkhttps://string-db.org/network/309801.trd_0288Hypothetical protein; Identified by glimmer; putative.
trd_0289 protein networkhttps://string-db.org/network/309801.trd_0289Bkrf1 encodes ebna-1 protein-like protein.
ftsH1 protein networkhttps://string-db.org/network/309801.trd_0293Metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In t [...]
trd_0294 protein networkhttps://string-db.org/network/309801.trd_0294Hypothetical protein; Identified by glimmer; putative.
tilS protein networkhttps://string-db.org/network/309801.trd_0295Putative bifunctional protein tilS/hprT; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. C [...]
trd_0297 protein networkhttps://string-db.org/network/309801.trd_0297Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
trd_0298 protein networkhttps://string-db.org/network/309801.trd_0298Putative 3-oxoacyl-(acyl carrier protein) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
trd_0301 protein networkhttps://string-db.org/network/309801.trd_0301Hypothetical protein; Identified by glimmer; putative.
trd_0302 protein networkhttps://string-db.org/network/309801.trd_03023-oxoadipate CoA-succinyl transferase beta subunit; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428.
trd_0303 protein networkhttps://string-db.org/network/309801.trd_0303IpsJ protein; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429.
trd_0304 protein networkhttps://string-db.org/network/309801.trd_0304Hypothetical protein; Identified by glimmer; putative.
trd_0305 protein networkhttps://string-db.org/network/309801.trd_0305ATP-dependent DNA helicase pcrA; Identified by match to protein family HMM PF00580.
ppdK protein networkhttps://string-db.org/network/309801.trd_0306Pyruvate, phosphate dikinase; Identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; B [...]
trd_0307 protein networkhttps://string-db.org/network/309801.trd_0307Putative aromatic metabolite ABC transporter; Identified by match to protein family HMM PF00903.
trd_0308 protein networkhttps://string-db.org/network/309801.trd_0308Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
trd_0309 protein networkhttps://string-db.org/network/309801.trd_0309Biuret hydrolase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
trd_0310 protein networkhttps://string-db.org/network/309801.trd_0310OsmC-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be mer [...]
trd_0311 protein networkhttps://string-db.org/network/309801.trd_0311Probable transferase protein.
trd_0312 protein networkhttps://string-db.org/network/309801.trd_0312Putative halocarboxylic acid dehalogenase DehI.
trd_0313 protein networkhttps://string-db.org/network/309801.trd_0313Putative conserved protein.
rlmN protein networkhttps://string-db.org/network/309801.trd_0314Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
trd_0315 protein networkhttps://string-db.org/network/309801.trd_0315Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.
trd_0316 protein networkhttps://string-db.org/network/309801.trd_0316ZIP zinc transporter family protein; Identified by match to protein family HMM PF02535.
trd_0317 protein networkhttps://string-db.org/network/309801.trd_0317ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
trd_0318 protein networkhttps://string-db.org/network/309801.trd_0318Putative ABC transport proteins, inner membrane component; Identified by match to protein family HMM PF00528.
trd_0319 protein networkhttps://string-db.org/network/309801.trd_0319Hypothetical protein; Identified by glimmer; putative.
trd_0321 protein networkhttps://string-db.org/network/309801.trd_0321Conserved hypothetical protein.
trd_0322 protein networkhttps://string-db.org/network/309801.trd_0322Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.
trd_0323 protein networkhttps://string-db.org/network/309801.trd_0323Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...]
trd_0324 protein networkhttps://string-db.org/network/309801.trd_0324Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...]
trd_0325 protein networkhttps://string-db.org/network/309801.trd_0325Hypothetical protein; Identified by glimmer; putative.
trd_0326 protein networkhttps://string-db.org/network/309801.trd_0326Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_0327 protein networkhttps://string-db.org/network/309801.trd_0327Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...]
trd_0328 protein networkhttps://string-db.org/network/309801.trd_0328Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF01978; match to protein family HMM PF08279.
trd_0329 protein networkhttps://string-db.org/network/309801.trd_0329Hypothetical protein; Identified by glimmer; putative.
trd_0330 protein networkhttps://string-db.org/network/309801.trd_0330Succinate dehydrogenase iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase ir [...]
nadB protein networkhttps://string-db.org/network/309801.trd_0331Succinate dehydrogenase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family [...]
trd_0332 protein networkhttps://string-db.org/network/309801.trd_0332Succinate dehydrogenase, membrane subunit.
trd_0333 protein networkhttps://string-db.org/network/309801.trd_0333Succinate dehydrogenase, cytochrome subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970.
trd_0334 protein networkhttps://string-db.org/network/309801.trd_0334Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
dinG protein networkhttps://string-db.org/network/309801.trd_0335Exonuclease family; 3'-5' exonuclease.
glpX protein networkhttps://string-db.org/network/309801.trd_0336Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330.
rho protein networkhttps://string-db.org/network/309801.trd_0337Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
trd_0338 protein networkhttps://string-db.org/network/309801.trd_0338Hypothetical protein; Identified by glimmer; putative.
trd_0339 protein networkhttps://string-db.org/network/309801.trd_0339Putative hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
trd_0340 protein networkhttps://string-db.org/network/309801.trd_0340Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_0341 protein networkhttps://string-db.org/network/309801.trd_0341Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
trd_0342 protein networkhttps://string-db.org/network/309801.trd_0342Predicted ABC-type ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...]
prmA protein networkhttps://string-db.org/network/309801.trd_0343Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
trd_0344 protein networkhttps://string-db.org/network/309801.trd_0344Putative glucose-1-phosphate thymidylyltransferase; Identified by match to protein family HMM PF00483.
trd_0346 protein networkhttps://string-db.org/network/309801.trd_0346Conserved hypothetical protein.
coaBC protein networkhttps://string-db.org/network/309801.trd_0347Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantot [...]
trd_0348 protein networkhttps://string-db.org/network/309801.trd_0348Hypothetical protein; Identified by glimmer; putative.
trd_0349 protein networkhttps://string-db.org/network/309801.trd_0349Hypothetical protein; Identified by glimmer; putative.
trd_0350 protein networkhttps://string-db.org/network/309801.trd_0350Putative peptide chain release factor subunit 1.
trd_0351 protein networkhttps://string-db.org/network/309801.trd_0351Diacylglycerol kinase catalytic domain (presumed) protein; Identified by match to protein family HMM PF00781.
trd_0352 protein networkhttps://string-db.org/network/309801.trd_0352Conserved hypothetical protein.
trd_0353 protein networkhttps://string-db.org/network/309801.trd_0353Hypothetical protein; Identified by glimmer; putative.
miaB protein networkhttps://string-db.org/network/309801.trd_0354tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...]
trd_0355 protein networkhttps://string-db.org/network/309801.trd_0355TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
trd_0356 protein networkhttps://string-db.org/network/309801.trd_0356Hypothetical protein; Identified by glimmer; putative.
trd_0357 protein networkhttps://string-db.org/network/309801.trd_0357Protein of unknown function superfamily; Identified by match to protein family HMM PF01887.
ggt protein networkhttps://string-db.org/network/309801.trd_0358Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
mobA protein networkhttps://string-db.org/network/309801.trd_0359Molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinuc [...]
trd_0360 protein networkhttps://string-db.org/network/309801.trd_0360SWIM zinc finger domain protein; Identified by match to protein family HMM PF04434.
trd_0361 protein networkhttps://string-db.org/network/309801.trd_0361Conserved hypothetical protein.
trd_0362 protein networkhttps://string-db.org/network/309801.trd_0362Identified by match to protein family HMM PF01522.
trd_0363 protein networkhttps://string-db.org/network/309801.trd_0363Probable acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...]
trd_0364 protein networkhttps://string-db.org/network/309801.trd_0364Hypothetical protein; Identified by glimmer; putative.
trd_0365 protein networkhttps://string-db.org/network/309801.trd_03652-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00977; Belo [...]
asd protein networkhttps://string-db.org/network/309801.trd_0366Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semia [...]
trd_0367 protein networkhttps://string-db.org/network/309801.trd_0367Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF03447.
metX protein networkhttps://string-db.org/network/309801.trd_0368Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
trd_0369 protein networkhttps://string-db.org/network/309801.trd_0369Putative AttH.
trd_0370 protein networkhttps://string-db.org/network/309801.trd_0370Putative membrane protein mmpL3; Identified by match to protein family HMM PF03176.
trd_0371 protein networkhttps://string-db.org/network/309801.trd_0371Trehalose-6-phosphate synthase; Identified by match to protein family HMM PF00982.
trd_0372 protein networkhttps://string-db.org/network/309801.trd_0372Hypothetical protein; Identified by glimmer; putative.
trd_0373 protein networkhttps://string-db.org/network/309801.trd_0373Halocyanin precursor-like protein; Identified by match to protein family HMM PF00127; match to protein family HMM TIGR01409.
trd_0374 protein networkhttps://string-db.org/network/309801.trd_0374Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
trd_0375 protein networkhttps://string-db.org/network/309801.trd_0375Hypothetical protein; Identified by glimmer; putative.
trd_0376 protein networkhttps://string-db.org/network/309801.trd_0376Domain of unknown function domain protein; Identified by match to protein family HMM PF01883.
trd_0377 protein networkhttps://string-db.org/network/309801.trd_0377SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
trd_0378 protein networkhttps://string-db.org/network/309801.trd_0378Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dep [...]
sufD protein networkhttps://string-db.org/network/309801.trd_0379FeS assembly protein SufD; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981.
sufB protein networkhttps://string-db.org/network/309801.trd_0380FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
sufC protein networkhttps://string-db.org/network/309801.trd_0381FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
trd_0382 protein networkhttps://string-db.org/network/309801.trd_0382Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
trd_0383 protein networkhttps://string-db.org/network/309801.trd_0383Hypothetical protein; Identified by glimmer; putative.
trd_0384 protein networkhttps://string-db.org/network/309801.trd_0384Identified by match to protein family HMM PF01592.
trd_0385 protein networkhttps://string-db.org/network/309801.trd_0385Putative DNA polymerase III, epsilon chain (EC); Identified by match to protein family HMM PF00929.
trd_0386 protein networkhttps://string-db.org/network/309801.trd_0386Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753; Belongs to the UPF0173 family.
trd_0387 protein networkhttps://string-db.org/network/309801.trd_0387Identified by match to protein family HMM PF07969.
trd_0388 protein networkhttps://string-db.org/network/309801.trd_0388Identified by match to protein family HMM PF07969.
trd_0389 protein networkhttps://string-db.org/network/309801.trd_0389Hypothetical protein; Identified by glimmer; putative.
trd_0390 protein networkhttps://string-db.org/network/309801.trd_0390Putative saccharide deacetylase, slightly; Identified by match to protein family HMM PF01522.
trd_0391 protein networkhttps://string-db.org/network/309801.trd_0391Cysteine desulfurase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01053.
trd_0392 protein networkhttps://string-db.org/network/309801.trd_0392Methionine gamma-lyase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212.
trd_0393 protein networkhttps://string-db.org/network/309801.trd_0393Hypothetical protein; Identified by glimmer; putative.
trd_0394 protein networkhttps://string-db.org/network/309801.trd_0394Putative ABC transporter, substrate binding protein (oligopeptide); Identified by match to protein family HMM PF00496.
trd_0395 protein networkhttps://string-db.org/network/309801.trd_0395Oligopeptide transport system permease protein oppB; Identified by match to protein family HMM PF00528.
trd_0396 protein networkhttps://string-db.org/network/309801.trd_0396Oligopeptide transport system permease protein appC; Identified by match to protein family HMM PF00528.
trd_0397 protein networkhttps://string-db.org/network/309801.trd_0397Hypothetical protein; Identified by glimmer; putative.
thiD protein networkhttps://string-db.org/network/309801.trd_0398Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097.
thiG protein networkhttps://string-db.org/network/309801.trd_0399Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxy [...]
thiE protein networkhttps://string-db.org/network/309801.trd_0400Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
thiE-2 protein networkhttps://string-db.org/network/309801.trd_0401Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
thiS protein networkhttps://string-db.org/network/309801.trd_0402Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM PF02824; match to protein family HMM TIGR01683.
trd_0403 protein networkhttps://string-db.org/network/309801.trd_0403Putative 6-O-methylguanine DNA methyltransferase family protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589.
trd_0404 protein networkhttps://string-db.org/network/309801.trd_0404Putative membrane protein.
secA protein networkhttps://string-db.org/network/309801.trd_0405Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
trd_0406 protein networkhttps://string-db.org/network/309801.trd_0406Glycerol uptake facilitator protein; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
trd_0407 protein networkhttps://string-db.org/network/309801.trd_0407Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_0408 protein networkhttps://string-db.org/network/309801.trd_0408Protein of unknown function (DUF461) family; Identified by match to protein family HMM PF04314.
trd_0409 protein networkhttps://string-db.org/network/309801.trd_0409Identified by match to protein family HMM PF00578; match to protein family HMM PF02630.
trd_0410 protein networkhttps://string-db.org/network/309801.trd_0410Hypothetical protein; Identified by glimmer; putative.
trd_0411 protein networkhttps://string-db.org/network/309801.trd_0411Lustrin A.
trd_0412 protein networkhttps://string-db.org/network/309801.trd_0412Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560.
dapB protein networkhttps://string-db.org/network/309801.trd_0413Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
dapA protein networkhttps://string-db.org/network/309801.trd_0414Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
trd_0415 protein networkhttps://string-db.org/network/309801.trd_0415Hypothetical protein; Identified by glimmer; putative.
trd_0416 protein networkhttps://string-db.org/network/309801.trd_0416Hypothetical protein; Identified by glimmer; putative.
trd_0417 protein networkhttps://string-db.org/network/309801.trd_0417Identified by match to protein family HMM PF03483.
trd_0418 protein networkhttps://string-db.org/network/309801.trd_0418Putative glycosyltransferase; Identified by match to protein family HMM PF00534.
dnaG protein networkhttps://string-db.org/network/309801.trd_0421DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
selA protein networkhttps://string-db.org/network/309801.trd_0422L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
trd_0423 protein networkhttps://string-db.org/network/309801.trd_0423Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; Belongs to the dGTPase family. Type 2 subfam [...]
trd_0424 protein networkhttps://string-db.org/network/309801.trd_0424Putative aminomethyltransferase; Identified by match to protein family HMM PF01571; Belongs to the GcvT family.
trd_0425 protein networkhttps://string-db.org/network/309801.trd_0425Conserved hypothetical protein.
trd_0426 protein networkhttps://string-db.org/network/309801.trd_0426Hypothetical protein; Identified by glimmer; putative.
uvrC protein networkhttps://string-db.org/network/309801.trd_0427Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
trd_0428 protein networkhttps://string-db.org/network/309801.trd_0428Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family.
trd_0429 protein networkhttps://string-db.org/network/309801.trd_0429Putative UDP-glucuronosyltransferase.
trd_0430 protein networkhttps://string-db.org/network/309801.trd_0430Putative membrane protein.
trd_0431 protein networkhttps://string-db.org/network/309801.trd_0431Hypothetical protein; Identified by glimmer; putative.
trd_0432 protein networkhttps://string-db.org/network/309801.trd_0432ATPase, aaa family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.
rph protein networkhttps://string-db.org/network/309801.trd_0433Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucl [...]
hisB protein networkhttps://string-db.org/network/309801.trd_0434Imidazoleglycerol-phosphate dehydratase; Identified by match to protein family HMM PF00475.
hisC protein networkhttps://string-db.org/network/309801.trd_0435Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransfe [...]
trd_0436 protein networkhttps://string-db.org/network/309801.trd_0436Beta-lactamase; Identified by match to protein family HMM PF00144; match to protein family HMM PF00768; Belongs to the peptidase S11 family.
trd_0437 protein networkhttps://string-db.org/network/309801.trd_0437Possible pseudouridine synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine syntha [...]
cmk protein networkhttps://string-db.org/network/309801.trd_0438Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.
trd_0439 protein networkhttps://string-db.org/network/309801.trd_0439Acyltransferase domain protein; Identified by match to protein family HMM PF01553.
trd_0440 protein networkhttps://string-db.org/network/309801.trd_0440Domain of unknown function (DUF362) family; Identified by match to protein family HMM PF04015.
trd_0441 protein networkhttps://string-db.org/network/309801.trd_0441Penicillin-binding protein dacF precursor; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family.
trd_0442 protein networkhttps://string-db.org/network/309801.trd_0442HspR; Identified by match to protein family HMM PF00376.
clpB protein networkhttps://string-db.org/network/309801.trd_0443Chaperone clpB 1; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the Clp [...]
trd_0444 protein networkhttps://string-db.org/network/309801.trd_0444Hypothetical protein; Identified by glimmer; putative.
trd_0445 protein networkhttps://string-db.org/network/309801.trd_0445Conserved hypothetical protein.
trd_0446 protein networkhttps://string-db.org/network/309801.trd_0446Conserved hypothetical protein.
trd_0447 protein networkhttps://string-db.org/network/309801.trd_0447Putative Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717.
trd_0448 protein networkhttps://string-db.org/network/309801.trd_0448Alcohol dehydrogenase, class III; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...]
aroF-2 protein networkhttps://string-db.org/network/309801.trd_0449Phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361.
trd_0450 protein networkhttps://string-db.org/network/309801.trd_0450Hypothetical protein; Identified by glimmer; putative.
trd_0451 protein networkhttps://string-db.org/network/309801.trd_0451Conserved hypothetical protein.
trd_0452 protein networkhttps://string-db.org/network/309801.trd_0452Glycosyl transferases group 1; Identified by match to protein family HMM PF00534.
trd_0453 protein networkhttps://string-db.org/network/309801.trd_0453Hypothetical protein; Identified by glimmer; putative.
trd_0454 protein networkhttps://string-db.org/network/309801.trd_0454Hypothetical protein; Identified by glimmer; putative.
trd_0455 protein networkhttps://string-db.org/network/309801.trd_0455malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
trd_0456 protein networkhttps://string-db.org/network/309801.trd_0456Hypothetical protein; Identified by glimmer; putative.
rex protein networkhttps://string-db.org/network/309801.trd_0457Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
trd_0458 protein networkhttps://string-db.org/network/309801.trd_0458Hypothetical protein; Identified by glimmer; putative.
nadE protein networkhttps://string-db.org/network/309801.trd_0459Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
recN protein networkhttps://string-db.org/network/309801.trd_0460DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
trd_0461 protein networkhttps://string-db.org/network/309801.trd_0461Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
trd_0462 protein networkhttps://string-db.org/network/309801.trd_0462Putative oxidoreductase; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560.
trd_0463 protein networkhttps://string-db.org/network/309801.trd_0463Flavin containing amine oxidase; Identified by match to protein family HMM PF01266.
trd_0464 protein networkhttps://string-db.org/network/309801.trd_0464Putative cytochrome c subfamily; Identified by match to protein family HMM PF00034.
trd_0465 protein networkhttps://string-db.org/network/309801.trd_0465Conserved hypothetical protein.
trd_0466 protein networkhttps://string-db.org/network/309801.trd_0466Probable molybdopterin oxidoreductase, membrane subunit; Identified by match to protein family HMM PF03916.
trd_0467 protein networkhttps://string-db.org/network/309801.trd_0467Putative membrane protein.
trd_0468 protein networkhttps://string-db.org/network/309801.trd_0468Oxidoreductase, iron-sulfur cluster-binding subunit; Identified by match to protein family HMM PF00037.
trd_0469 protein networkhttps://string-db.org/network/309801.trd_0469Putative 4Fe-4S ferredoxin, iron-sulfur binding; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidor [...]
trd_0470 protein networkhttps://string-db.org/network/309801.trd_0470Chaperone protein HtpG.
trd_0471 protein networkhttps://string-db.org/network/309801.trd_0471Hypothetical protein; Identified by glimmer; putative.
trd_0472 protein networkhttps://string-db.org/network/309801.trd_0472Hypothetical protein; Identified by glimmer; putative.
trd_0473 protein networkhttps://string-db.org/network/309801.trd_0473Hypothetical protein; Identified by glimmer; putative.
trd_0474 protein networkhttps://string-db.org/network/309801.trd_0474Putative membrane protein.
trd_0475 protein networkhttps://string-db.org/network/309801.trd_0475Hypothetical protein; Identified by glimmer; putative.
trd_0476 protein networkhttps://string-db.org/network/309801.trd_0476Transketolase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged [...]
trd_0477 protein networkhttps://string-db.org/network/309801.trd_0477Transketolase, pyridine binding domain protein; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780.
rpiA protein networkhttps://string-db.org/network/309801.trd_0478Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
trd_0479 protein networkhttps://string-db.org/network/309801.trd_0479Putative integral membrane protein.
trd_0480 protein networkhttps://string-db.org/network/309801.trd_0480LysM domain protein; Identified by match to protein family HMM PF01476.
trd_0481 protein networkhttps://string-db.org/network/309801.trd_0481Hypothetical protein; Identified by glimmer; putative.
trd_0482 protein networkhttps://string-db.org/network/309801.trd_0482NAD(P) transhydrogenase subunit alpha part 1; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current ge [...]
trd_0483 protein networkhttps://string-db.org/network/309801.trd_0483NAD(P) transhydrogenase, alpha-2 subunit.
trd_0484 protein networkhttps://string-db.org/network/309801.trd_0484NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...]
trd_0485 protein networkhttps://string-db.org/network/309801.trd_0485Hypothetical protein; Identified by glimmer; putative.
trd_0486 protein networkhttps://string-db.org/network/309801.trd_0486Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC [...]
trd_0487 protein networkhttps://string-db.org/network/309801.trd_0487Carboxyl-terminal processing protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A [...]
trd_0488 protein networkhttps://string-db.org/network/309801.trd_0488Similar to BH1559 unknown conserved protein in B. subtilis; identified by match to protein family HMM PF03745.
trd_0489 protein networkhttps://string-db.org/network/309801.trd_0489Uncharacterized proteins, LmbE homolog; Identified by match to protein family HMM PF02585.
trd_0490 protein networkhttps://string-db.org/network/309801.trd_0490Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374.
uppP protein networkhttps://string-db.org/network/309801.trd_0491Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
trd_0492 protein networkhttps://string-db.org/network/309801.trd_0492Putative transport protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
trd_0493 protein networkhttps://string-db.org/network/309801.trd_0493Protein csaA; Identified by match to protein family HMM PF01588; match to protein family HMM TIGR02222.
trd_0494 protein networkhttps://string-db.org/network/309801.trd_0494Identified by match to protein family HMM PF00293.
aceB protein networkhttps://string-db.org/network/309801.trd_0495Malate synthase A; Identified by match to protein family HMM PF01274; match to protein family HMM TIGR01344; Belongs to the malate synthase family.
trd_0496 protein networkhttps://string-db.org/network/309801.trd_0496Isocitrate lyase; Identified by match to protein family HMM PF00463.
trd_0497 protein networkhttps://string-db.org/network/309801.trd_0497RuBisCO operon transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
trd_0498 protein networkhttps://string-db.org/network/309801.trd_0498Protein of unknown function superfamily; Identified by match to protein family HMM PF01904.
trd_0499 protein networkhttps://string-db.org/network/309801.trd_0499Hypothetical protein; Identified by glimmer; putative.
trd_0501 protein networkhttps://string-db.org/network/309801.trd_0501P49 secreted protein.
ribD protein networkhttps://string-db.org/network/309801.trd_0502Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...]
ribE protein networkhttps://string-db.org/network/309801.trd_0503Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
ribBA protein networkhttps://string-db.org/network/309801.trd_0504Riboflavin biosynthesis protein ribA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohy [...]
ribH protein networkhttps://string-db.org/network/309801.trd_05056,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
trd_0506 protein networkhttps://string-db.org/network/309801.trd_0506Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family.
trd_0507 protein networkhttps://string-db.org/network/309801.trd_0507MitC; Identified by match to protein family HMM PF02585.
selB protein networkhttps://string-db.org/network/309801.trd_0508Selenocysteine-specific translation elongation factor; Identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09106; match to protei [...]
trd_0509 protein networkhttps://string-db.org/network/309801.trd_0509Protein of unknown function, DUF255 family; Identified by match to protein family HMM PF03190.
trd_0510 protein networkhttps://string-db.org/network/309801.trd_0510Putative amidase; Identified by match to protein family HMM PF03069.
trd_0511 protein networkhttps://string-db.org/network/309801.trd_0511Hypothetical protein; Identified by glimmer; putative.
trd_0512 protein networkhttps://string-db.org/network/309801.trd_0512Conserved hypothetical protein; Identified by match to protein family HMM PF07920.
pepA protein networkhttps://string-db.org/network/309801.trd_0513PepB protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
trd_0514 protein networkhttps://string-db.org/network/309801.trd_0514Conserved hypothetical protein TIGR00149; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149.
trd_0515 protein networkhttps://string-db.org/network/309801.trd_0515Possible DNA binding protein; Identified by match to protein family HMM PF01381.
trd_0516 protein networkhttps://string-db.org/network/309801.trd_0516Methyltransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_0517 protein networkhttps://string-db.org/network/309801.trd_05173-mercaptopyruvate sulfurtransferase; Identified by match to protein family HMM PF00581.
trd_0518 protein networkhttps://string-db.org/network/309801.trd_0518Hypothetical protein; Identified by glimmer; putative.
trd_0519 protein networkhttps://string-db.org/network/309801.trd_0519Uncharacterized domain HDIG protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277.
trd_0520 protein networkhttps://string-db.org/network/309801.trd_0520Spermidine/putrescine-binding periplasmic protein precursor; Identified by match to protein family HMM PF01547.
trd_0521 protein networkhttps://string-db.org/network/309801.trd_0521ABC-type spermidine/putrescine transport system, permease component II; Identified by match to protein family HMM PF00528.
trd_0522 protein networkhttps://string-db.org/network/309801.trd_0522Spermidine/putrescine transport system permease protein potB; Identified by match to protein family HMM PF00528.
potA protein networkhttps://string-db.org/network/309801.trd_0523ATP-binding component of putrescine transport system; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [...]
trd_0524 protein networkhttps://string-db.org/network/309801.trd_0524Folylpolyglutamate synthase; Identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499.
trd_0525 protein networkhttps://string-db.org/network/309801.trd_0525Putative membrane protein.
trd_0526 protein networkhttps://string-db.org/network/309801.trd_0526Mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
trd_0527 protein networkhttps://string-db.org/network/309801.trd_05273-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
trd_0528 protein networkhttps://string-db.org/network/309801.trd_0528Putative agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family.
trd_0529 protein networkhttps://string-db.org/network/309801.trd_0529Putative agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family.
trd_0530 protein networkhttps://string-db.org/network/309801.trd_0530Putative aminomethyltransferase protein.
ureC protein networkhttps://string-db.org/network/309801.trd_0531Urease alpha subunit; Identified by match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM PF07969.
ureB protein networkhttps://string-db.org/network/309801.trd_0532Urease, beta subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
ureA protein networkhttps://string-db.org/network/309801.trd_0533Urease, gamma subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_0534 protein networkhttps://string-db.org/network/309801.trd_0534Hypothetical protein; Identified by glimmer; putative.
trd_0535 protein networkhttps://string-db.org/network/309801.trd_0535DNA binding domain, excisionase family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764.
trd_0536 protein networkhttps://string-db.org/network/309801.trd_0536Hypothetical protein; Identified by glimmer; putative.
rpsU protein networkhttps://string-db.org/network/309801.trd_0537Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
trd_0538 protein networkhttps://string-db.org/network/309801.trd_0538Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_0539 protein networkhttps://string-db.org/network/309801.trd_0539TENA/THI-4 family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to t [...]
trd_0540 protein networkhttps://string-db.org/network/309801.trd_0540TENA/THI-4 family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, cataly [...]
trd_0541 protein networkhttps://string-db.org/network/309801.trd_0541Hypothetical protein; Identified by glimmer; putative.
trd_0542 protein networkhttps://string-db.org/network/309801.trd_0542Glucose-1-phosphate thymidylyltransferase; Identified by match to protein family HMM PF00483.
argS protein networkhttps://string-db.org/network/309801.trd_0543arginyl-tRNA synthetase; Identified by match to protein family HMM PF00750; match to protein family HMM PF05746; match to protein family HMM TIGR00456.
trd_0544 protein networkhttps://string-db.org/network/309801.trd_0544Probable transcription regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
trd_0545 protein networkhttps://string-db.org/network/309801.trd_0545Hypothetical protein; Identified by glimmer; putative.
dcd protein networkhttps://string-db.org/network/309801.trd_0546Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
trd_0547 protein networkhttps://string-db.org/network/309801.trd_0547Putative ATP:cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; Belongs to the Cob(I)alamin adenosyltransferase family.
trd_0548 protein networkhttps://string-db.org/network/309801.trd_0548ABC-2 type transporter superfamily; Identified by match to protein family HMM PF01061.
trd_0549 protein networkhttps://string-db.org/network/309801.trd_0549Multidrug ABC transporter, ATP-binding protein.
trd_0550 protein networkhttps://string-db.org/network/309801.trd_0550Hypothetical protein; Identified by glimmer; putative.
trd_0551 protein networkhttps://string-db.org/network/309801.trd_0551Hypothetical protein; Identified by glimmer; putative.
trd_0552 protein networkhttps://string-db.org/network/309801.trd_0552Hypothetical protein; Identified by glimmer; putative.
trd_0553 protein networkhttps://string-db.org/network/309801.trd_0553Putative integrase; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
trd_0554 protein networkhttps://string-db.org/network/309801.trd_0554ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188.
trd_0555 protein networkhttps://string-db.org/network/309801.trd_0555Hypothetical protein; Identified by glimmer; putative.
trd_0557 protein networkhttps://string-db.org/network/309801.trd_0557Cytochrome c oxidase (bo3-type) subunit II; Identified by match to protein family HMM PF00116; match to protein family HMM PF00127.
trd_0558 protein networkhttps://string-db.org/network/309801.trd_0558Cytochrome c oxidase subunit 1; Identified by match to protein family HMM PF00115.
trd_0559 protein networkhttps://string-db.org/network/309801.trd_0559Probable acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...]
trd_0560 protein networkhttps://string-db.org/network/309801.trd_0560Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
sucB protein networkhttps://string-db.org/network/309801.trd_05612-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion [...]
sucA protein networkhttps://string-db.org/network/309801.trd_05622-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.
trd_0563 protein networkhttps://string-db.org/network/309801.trd_0563Putative FAD binding domain; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
mgtE protein networkhttps://string-db.org/network/309801.trd_0564Magnesium transporter; Acts as a magnesium transporter.
trd_0565 protein networkhttps://string-db.org/network/309801.trd_0565Zn-dependent hydrolase; Identified by match to protein family HMM PF00753.
trd_0566 protein networkhttps://string-db.org/network/309801.trd_0566Putative membrane protein; Identified by match to protein family HMM PF07690.
trd_0567 protein networkhttps://string-db.org/network/309801.trd_0567PHP domain protein; Identified by match to protein family HMM PF02811.
trd_0569 protein networkhttps://string-db.org/network/309801.trd_0569Hypothetical protein; Identified by glimmer; putative.
trd_0570 protein networkhttps://string-db.org/network/309801.trd_0570Hypothetical protein; Identified by glimmer; putative.
arcC protein networkhttps://string-db.org/network/309801.trd_0571Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family.
trd_0572 protein networkhttps://string-db.org/network/309801.trd_0572Protein of unknown function (DUF1116) superfamily; Identified by match to protein family HMM PF06545.
trd_0573 protein networkhttps://string-db.org/network/309801.trd_0573Protein fdrA; Identified by match to protein family HMM PF06263.
trd_0575 protein networkhttps://string-db.org/network/309801.trd_0575Hypothetical protein; Identified by glimmer; putative.
trd_0577 protein networkhttps://string-db.org/network/309801.trd_0577Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
trd_0578 protein networkhttps://string-db.org/network/309801.trd_0578Aldehyde oxidase small subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
trd_0579 protein networkhttps://string-db.org/network/309801.trd_0579Oxidoreductase, large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
trd_0580 protein networkhttps://string-db.org/network/309801.trd_0580Putative polyketide cyclase; Identified by match to protein family HMM PF04199.
trd_0581 protein networkhttps://string-db.org/network/309801.trd_0581Putative polyketide cyclase; Identified by match to protein family HMM PF04199.
trd_0582 protein networkhttps://string-db.org/network/309801.trd_0582NAD-dependent alcohol dehydrogenase; Identified by match to protein family HMM PF08240; match to protein family HMM TIGR02822.
trd_0583 protein networkhttps://string-db.org/network/309801.trd_0583Cation-transport ATPase, E1-E2 family; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF0 [...]
trd_0584 protein networkhttps://string-db.org/network/309801.trd_0584Putative 4-hydroxybenzoyl-CoA thioesterase.
trd_0585 protein networkhttps://string-db.org/network/309801.trd_0585Hypothetical protein; Identified by glimmer; putative.
trd_0588 protein networkhttps://string-db.org/network/309801.trd_0588Hypothetical protein; Identified by glimmer; putative.
trd_0589 protein networkhttps://string-db.org/network/309801.trd_0589Putative integrase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be me [...]
trd_0590 protein networkhttps://string-db.org/network/309801.trd_0590Hypothetical protein; Identified by glimmer; putative.
trd_0591 protein networkhttps://string-db.org/network/309801.trd_0591Hypothetical protein; Identified by glimmer; putative.
trd_0592 protein networkhttps://string-db.org/network/309801.trd_0592Hypothetical protein; Identified by glimmer; putative.
trd_0594 protein networkhttps://string-db.org/network/309801.trd_0594Cytochrome oxidase subunit II; Identified by match to protein family HMM PF00034.
nadC protein networkhttps://string-db.org/network/309801.trd_0595Nicotinate-nucleotide pyrophosphorylase; Identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078.
nadA protein networkhttps://string-db.org/network/309801.trd_0596Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
trd_0597 protein networkhttps://string-db.org/network/309801.trd_0597Putative pyrimidine precursor biosynthesis enzyme; Identified by match to protein family HMM PF09084.
trd_0598 protein networkhttps://string-db.org/network/309801.trd_0598ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
trd_0599 protein networkhttps://string-db.org/network/309801.trd_0599ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
rnz protein networkhttps://string-db.org/network/309801.trd_0603Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs [...]
ggt-2 protein networkhttps://string-db.org/network/309801.trd_0604Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
trd_0605 protein networkhttps://string-db.org/network/309801.trd_0605Conserved hypothetical protein.
trd_0606 protein networkhttps://string-db.org/network/309801.trd_0606Hydrogenase expression/formation; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769.
trd_0607 protein networkhttps://string-db.org/network/309801.trd_0607Hypothetical protein; Identified by glimmer; putative.
pfkA protein networkhttps://string-db.org/network/309801.trd_06086-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase t [...]
proS protein networkhttps://string-db.org/network/309801.trd_0609prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
rpe protein networkhttps://string-db.org/network/309801.trd_0613Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
trd_0614 protein networkhttps://string-db.org/network/309801.trd_0614Putative molybdopterin biosynthesis protein.
trd_0615 protein networkhttps://string-db.org/network/309801.trd_0615FHA domain protein; Identified by match to protein family HMM PF00498.
trd_0616 protein networkhttps://string-db.org/network/309801.trd_0616ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00498.
trd_0617 protein networkhttps://string-db.org/network/309801.trd_0617Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
trd_0618 protein networkhttps://string-db.org/network/309801.trd_0618DUF167; Identified by match to protein family HMM PF02594; Belongs to the UPF0235 family.
trd_0619 protein networkhttps://string-db.org/network/309801.trd_0619Identified by match to protein family HMM PF00535.
trd_0620 protein networkhttps://string-db.org/network/309801.trd_0620Conserved hypothetical protein TIGR00268; Identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268.
trd_0622 protein networkhttps://string-db.org/network/309801.trd_0622Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374.
pnp protein networkhttps://string-db.org/network/309801.trd_0623Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rpsO protein networkhttps://string-db.org/network/309801.trd_0624Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several [...]
ilvC protein networkhttps://string-db.org/network/309801.trd_0625Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...]
ilvN protein networkhttps://string-db.org/network/309801.trd_0626Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119.
ilvB protein networkhttps://string-db.org/network/309801.trd_0627Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to prot [...]
trd_0628 protein networkhttps://string-db.org/network/309801.trd_0628Hypothetical protein; Identified by glimmer; putative.
trd_0629 protein networkhttps://string-db.org/network/309801.trd_0629Hypothetical protein; Identified by glimmer; putative.
trd_0630 protein networkhttps://string-db.org/network/309801.trd_0630Hypothetical protein; Identified by glimmer; putative.
trd_0632 protein networkhttps://string-db.org/network/309801.trd_0632KDP operon transcriptional regulatory protein kdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
trd_0633 protein networkhttps://string-db.org/network/309801.trd_0633Hypothetical protein; Identified by glimmer; putative.
trd_0634 protein networkhttps://string-db.org/network/309801.trd_0634Serinethreonine phosphatase; Similar to chain a, crystal structure of the mycobacterium tuberculosis serinethreonine phosphatase pstpppp at 1.95 a; identified by match to protein family HMM PF004 [...]
trd_0635 protein networkhttps://string-db.org/network/309801.trd_0635Identified by match to protein family HMM PF04909.
ruvA protein networkhttps://string-db.org/network/309801.trd_0636Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
hisD protein networkhttps://string-db.org/network/309801.trd_0637Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
hisG protein networkhttps://string-db.org/network/309801.trd_0638ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...]
trd_0639 protein networkhttps://string-db.org/network/309801.trd_0639histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587.
pheT protein networkhttps://string-db.org/network/309801.trd_0640phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HM [...]
pheS protein networkhttps://string-db.org/network/309801.trd_0641phenylalanyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II [...]
eno protein networkhttps://string-db.org/network/309801.trd_0642Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...]
gpmI protein networkhttps://string-db.org/network/309801.trd_06432,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
ilvD protein networkhttps://string-db.org/network/309801.trd_0644Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family.
purK protein networkhttps://string-db.org/network/309801.trd_0645Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide [...]
purE protein networkhttps://string-db.org/network/309801.trd_0646Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
trd_0647 protein networkhttps://string-db.org/network/309801.trd_0647Isocitrate dehydrogenase (NADP); Identified by match to protein family HMM PF00180.
trd_0648 protein networkhttps://string-db.org/network/309801.trd_0648Amine oxidase, flavin-containing protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
secF protein networkhttps://string-db.org/network/309801.trd_0649Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
secD protein networkhttps://string-db.org/network/309801.trd_0650Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
nadD protein networkhttps://string-db.org/network/309801.trd_0651Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
gyrA protein networkhttps://string-db.org/network/309801.trd_0652DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
trd_0653 protein networkhttps://string-db.org/network/309801.trd_0653Putative lipid A biosynthesis lauroyl acyltransferase.
trd_0654 protein networkhttps://string-db.org/network/309801.trd_0654Hypothetical protein; Identified by glimmer; putative.
trd_0655 protein networkhttps://string-db.org/network/309801.trd_0655Ino1-like myo-inositol-1-phosphate synthase related; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994.
trd_0656 protein networkhttps://string-db.org/network/309801.trd_0656Hypothetical protein; Identified by glimmer; putative.
trd_0657 protein networkhttps://string-db.org/network/309801.trd_0657Putative heptosyltransferase III WaaQ; Identified by match to protein family HMM PF01075.
trd_0658 protein networkhttps://string-db.org/network/309801.trd_0658AprM; Identified by match to protein family HMM PF00534.
trd_0659 protein networkhttps://string-db.org/network/309801.trd_0659Lipopolysaccharide core biosynthesis heptosyltransferase; Identified by match to protein family HMM PF01075.
trd_0660 protein networkhttps://string-db.org/network/309801.trd_0660Putative glycosyltransferase; Identified by match to protein family HMM PF01075.
fabZ protein networkhttps://string-db.org/network/309801.trd_0661Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...]
purA protein networkhttps://string-db.org/network/309801.trd_0662Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
dnaJ-2 protein networkhttps://string-db.org/network/309801.trd_0663Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
trd_0664 protein networkhttps://string-db.org/network/309801.trd_0664Hypothetical protein; Identified by glimmer; putative.
trd_0665 protein networkhttps://string-db.org/network/309801.trd_0665Conserved hypothetical archeal protein.
lexA protein networkhttps://string-db.org/network/309801.trd_0666LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causin [...]
trd_0667 protein networkhttps://string-db.org/network/309801.trd_0667Hypothetical protein; Identified by glimmer; putative.
mutS2 protein networkhttps://string-db.org/network/309801.trd_0668MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the [...]
trd_0669 protein networkhttps://string-db.org/network/309801.trd_0669Conserved hypothetical protein.
mfd protein networkhttps://string-db.org/network/309801.trd_0670Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
trd_0671 protein networkhttps://string-db.org/network/309801.trd_0671Competence protein ComEA helix-hairpin-helix repeat region; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or [...]
trd_0672 protein networkhttps://string-db.org/network/309801.trd_0672ComE-like competence protein; Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
tuf protein networkhttps://string-db.org/network/309801.trd_0676Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpmG protein networkhttps://string-db.org/network/309801.trd_0677Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
secE protein networkhttps://string-db.org/network/309801.trd_0679Preprotein translocase; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
nusG protein networkhttps://string-db.org/network/309801.trd_0680Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/309801.trd_0681Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/309801.trd_0682Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplJ protein networkhttps://string-db.org/network/309801.trd_068350S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...]
rplL protein networkhttps://string-db.org/network/309801.trd_0684Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...]
trd_0686 protein networkhttps://string-db.org/network/309801.trd_0686Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF03861.
trd_0687 protein networkhttps://string-db.org/network/309801.trd_0687Identified by match to protein family HMM PF07949.
dacA protein networkhttps://string-db.org/network/309801.trd_0688Conserved hypothetical protein TIGR00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacter [...]
trd_0689 protein networkhttps://string-db.org/network/309801.trd_0689Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_0690 protein networkhttps://string-db.org/network/309801.trd_0690Putative chromosome replication initiation protein; Identified by match to protein family HMM PF00308; match to protein family HMM PF01695.
trd_0691 protein networkhttps://string-db.org/network/309801.trd_0691Putative dnaD/phage-associated domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446.
dnaB protein networkhttps://string-db.org/network/309801.trd_0692Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
rplI protein networkhttps://string-db.org/network/309801.trd_0693Ribosomal protein L9; Binds to the 23S rRNA.
trd_0694 protein networkhttps://string-db.org/network/309801.trd_0694Hypothetical protein; Identified by glimmer; putative.
trd_0695 protein networkhttps://string-db.org/network/309801.trd_0695Hypothetical protein; Identified by glimmer; putative.
trd_0696 protein networkhttps://string-db.org/network/309801.trd_0696RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...]
cysS protein networkhttps://string-db.org/network/309801.trd_0697cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA syn [...]
trd_0698 protein networkhttps://string-db.org/network/309801.trd_0698Hypothetical protein; Identified by glimmer; putative.
trd_0699 protein networkhttps://string-db.org/network/309801.trd_0699Putative regulatory protein, FmdB family; Identified by match to protein family HMM TIGR02605.
polA protein networkhttps://string-db.org/network/309801.trd_0700DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
trd_0701 protein networkhttps://string-db.org/network/309801.trd_0701ATPase domain protein; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
trd_0702 protein networkhttps://string-db.org/network/309801.trd_0702Protein of unknown function family; Identified by match to protein family HMM PF01882.
trd_0703 protein networkhttps://string-db.org/network/309801.trd_0703Transglutaminase-like superfamily protein; Identified by match to protein family HMM PF01841.
rbsK protein networkhttps://string-db.org/network/309801.trd_0704Probable ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotid [...]
hppA protein networkhttps://string-db.org/network/309801.trd_0705V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive [...]
trd_0706 protein networkhttps://string-db.org/network/309801.trd_0706Conserved hypothetical protein.
trd_0707 protein networkhttps://string-db.org/network/309801.trd_0707CoxC.
trd_0708 protein networkhttps://string-db.org/network/309801.trd_0708Quinol oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme c [...]
trd_0709 protein networkhttps://string-db.org/network/309801.trd_0709Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear cent [...]
trd_0710 protein networkhttps://string-db.org/network/309801.trd_0710Hypothetical protein; Identified by glimmer; putative.
acsA protein networkhttps://string-db.org/network/309801.trd_0711acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. [...]
trd_0712 protein networkhttps://string-db.org/network/309801.trd_0712acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfami [...]
recF protein networkhttps://string-db.org/network/309801.trd_0713DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...]
dnaN protein networkhttps://string-db.org/network/309801.trd_0714DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
trd_0715 protein networkhttps://string-db.org/network/309801.trd_0715Hypothetical protein; Identified by glimmer; putative.
queA protein networkhttps://string-db.org/network/309801.trd_0716S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...]
trd_0717 protein networkhttps://string-db.org/network/309801.trd_0717Probable cysteine desulfurase; Identified by match to protein family HMM PF00266.
ruvB protein networkhttps://string-db.org/network/309801.trd_0718Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
trd_0719 protein networkhttps://string-db.org/network/309801.trd_0719Conserved domain protein; Identified by match to protein family HMM PF03966; Belongs to the UPF0434 family.
trd_0720 protein networkhttps://string-db.org/network/309801.trd_0720Hypothetical protein; Identified by glimmer; putative.
trd_0723 protein networkhttps://string-db.org/network/309801.trd_0723Putative glutathione-regulated potassium-efflux system protein KefB; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proto [...]
trd_0724 protein networkhttps://string-db.org/network/309801.trd_0724Hypothetical protein; Identified by glimmer; putative.
trd_0725 protein networkhttps://string-db.org/network/309801.trd_0725Hypothetical protein; Identified by glimmer; putative.
alaS protein networkhttps://string-db.org/network/309801.trd_0726alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
trd_0727 protein networkhttps://string-db.org/network/309801.trd_0727Hypothetical protein; Identified by glimmer; putative.
trd_0728 protein networkhttps://string-db.org/network/309801.trd_0728Hypothetical protein; Identified by glimmer; putative.
trd_0729 protein networkhttps://string-db.org/network/309801.trd_0729Conserved hypothetical protein TIGR00250; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
trd_0731 protein networkhttps://string-db.org/network/309801.trd_0731Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153.
trd_0732 protein networkhttps://string-db.org/network/309801.trd_0732Hypothetical protein; Identified by glimmer; putative.
folD protein networkhttps://string-db.org/network/309801.trd_07335,10-methylene-tetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate [...]
trd_0734 protein networkhttps://string-db.org/network/309801.trd_0734Hypothetical protein; Identified by glimmer; putative.
trd_0735 protein networkhttps://string-db.org/network/309801.trd_0735Hypothetical protein; Identified by glimmer; putative.
trd_0736 protein networkhttps://string-db.org/network/309801.trd_0736Helix-turn-helix domain protein; Identified by match to protein family HMM PF01381.
trd_0738 protein networkhttps://string-db.org/network/309801.trd_0738DNA polymerase III alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR0059 [...]
trd_0739 protein networkhttps://string-db.org/network/309801.trd_0739Putative cyanophycin synthetase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...]
trd_0740 protein networkhttps://string-db.org/network/309801.trd_0740Cyanophycin synthetase.
rdgB protein networkhttps://string-db.org/network/309801.trd_0741Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...]
trd_0742 protein networkhttps://string-db.org/network/309801.trd_0742TatD-related deoxyribonuclease; Identified by match to protein family HMM PF01026; match to protein family HMM PF04909; match to protein family HMM TIGR00010.
glmS protein networkhttps://string-db.org/network/309801.trd_0743Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135.
trd_0744 protein networkhttps://string-db.org/network/309801.trd_0744Hypothetical protein; Identified by glimmer; putative.
purB protein networkhttps://string-db.org/network/309801.trd_0745Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
purC protein networkhttps://string-db.org/network/309801.trd_0746Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.
purS protein networkhttps://string-db.org/network/309801.trd_0747Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent [...]
purQ protein networkhttps://string-db.org/network/309801.trd_0748Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion o [...]
purL protein networkhttps://string-db.org/network/309801.trd_0749Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion [...]
purF protein networkhttps://string-db.org/network/309801.trd_0750Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
gcvT protein networkhttps://string-db.org/network/309801.trd_0751Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
gcvH protein networkhttps://string-db.org/network/309801.trd_0752Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
gcvPA protein networkhttps://string-db.org/network/309801.trd_0753Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...]
engA protein networkhttps://string-db.org/network/309801.trd_0754Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA [...]
glyA protein networkhttps://string-db.org/network/309801.trd_0755Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
trd_0756 protein networkhttps://string-db.org/network/309801.trd_0756Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Identified by match to protein family HMM PF00953.
ubiB protein networkhttps://string-db.org/network/309801.trd_07572-polyprenylphenol 6-hydroxylase; Identified by match to protein family HMM PF03109.
trd_0758 protein networkhttps://string-db.org/network/309801.trd_0758Identified by match to protein family HMM TIGR02605.
htpX protein networkhttps://string-db.org/network/309801.trd_0760Protease htpx; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family.
trd_0761 protein networkhttps://string-db.org/network/309801.trd_0761Conserved hypothetical protein.
trd_0762 protein networkhttps://string-db.org/network/309801.trd_0762Conserved hypothetical protein.
trd_0763 protein networkhttps://string-db.org/network/309801.trd_0763Transcription regulator; Identified by match to protein family HMM PF04012.
trd_0764 protein networkhttps://string-db.org/network/309801.trd_0764Protein of unknown function superfamily; Identified by match to protein family HMM PF01972.
trd_0767 protein networkhttps://string-db.org/network/309801.trd_0767Alcohol dehydrogenase class III; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
tyrS protein networkhttps://string-db.org/network/309801.trd_0768tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
ribF protein networkhttps://string-db.org/network/309801.trd_0769Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.
truB protein networkhttps://string-db.org/network/309801.trd_0770tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
trd_0771 protein networkhttps://string-db.org/network/309801.trd_0771Identified by match to protein family HMM PF01368; match to protein family HMM PF02272.
rbfA protein networkhttps://string-db.org/network/309801.trd_0772Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
infB protein networkhttps://string-db.org/network/309801.trd_0773Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
trd_0774 protein networkhttps://string-db.org/network/309801.trd_0774Protein of unknown function (DUF448) family; Identified by match to protein family HMM PF04296.
nusA protein networkhttps://string-db.org/network/309801.trd_0775Transcription termination factor NusA; Participates in both transcription termination and antitermination.
trd_0776 protein networkhttps://string-db.org/network/309801.trd_0776Hypothetical protein; Identified by glimmer; putative.
trd_0777 protein networkhttps://string-db.org/network/309801.trd_0777Putative conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
gap protein networkhttps://string-db.org/network/309801.trd_0778Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...]
pgk protein networkhttps://string-db.org/network/309801.trd_0779Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
tpiA protein networkhttps://string-db.org/network/309801.trd_0780Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
secG protein networkhttps://string-db.org/network/309801.trd_0781Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
trd_0782 protein networkhttps://string-db.org/network/309801.trd_0782Putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; Identified by match to protein family HMM PF00496.
tatA protein networkhttps://string-db.org/network/309801.trd_0783mttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across memb [...]
trd_0784 protein networkhttps://string-db.org/network/309801.trd_0784Hypothetical protein; Identified by glimmer; putative.
trd_0785 protein networkhttps://string-db.org/network/309801.trd_0785Hypothetical protein; Identified by glimmer; putative.
trd_0786 protein networkhttps://string-db.org/network/309801.trd_0786Map3k10 protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merge [...]
trd_0787 protein networkhttps://string-db.org/network/309801.trd_0787Hypothetical protein; Identified by glimmer; putative.
lepB protein networkhttps://string-db.org/network/309801.trd_0788Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
trd_0789 protein networkhttps://string-db.org/network/309801.trd_0789Uncharacterized ACR; COG1259 superfamily; identified by match to protein family HMM PF02577.
trd_0790 protein networkhttps://string-db.org/network/309801.trd_0790Hypothetical protein; Identified by glimmer; putative.
trd_0791 protein networkhttps://string-db.org/network/309801.trd_0791Hypothetical protein; Identified by glimmer; putative.
trd_0792 protein networkhttps://string-db.org/network/309801.trd_0792Putative NAD-reducing hydrogenase; Identified by match to protein family HMM PF01257.
trd_0793 protein networkhttps://string-db.org/network/309801.trd_0793NAD-dependent formate dehydrogenase beta subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curren [...]
trd_0794 protein networkhttps://string-db.org/network/309801.trd_0794Putative ornithine cyclodeaminase; Identified by match to protein family HMM PF01488; match to protein family HMM PF02423.
trd_0796 protein networkhttps://string-db.org/network/309801.trd_0796Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
trd_0797 protein networkhttps://string-db.org/network/309801.trd_07973-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
trd_0798 protein networkhttps://string-db.org/network/309801.trd_0798Hypothetical protein; Identified by glimmer; putative.
sigA protein networkhttps://string-db.org/network/309801.trd_0799Sigma factor MysA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma fa [...]
trd_0800 protein networkhttps://string-db.org/network/309801.trd_0800Hypothetical protein; Identified by glimmer; putative.
ruvC protein networkhttps://string-db.org/network/309801.trd_0801Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
trd_0802 protein networkhttps://string-db.org/network/309801.trd_0802Identified by match to protein family HMM PF01728; match to protein family HMM TIGR00478.
trd_0803 protein networkhttps://string-db.org/network/309801.trd_0803ArgK protein; Identified by match to protein family HMM PF03308.
trd_0804 protein networkhttps://string-db.org/network/309801.trd_0804Sbm protein; Identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640.
trd_0805 protein networkhttps://string-db.org/network/309801.trd_0805Putative ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
trd_0806 protein networkhttps://string-db.org/network/309801.trd_0806Hypothetical protein; Identified by glimmer; putative.
pth protein networkhttps://string-db.org/network/309801.trd_0807peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
trd_0808 protein networkhttps://string-db.org/network/309801.trd_0808Putative glycosyltransferase; Identified by match to protein family HMM PF00534.
tatA-2 protein networkhttps://string-db.org/network/309801.trd_0809Putative twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine [...]
trd_0810 protein networkhttps://string-db.org/network/309801.trd_0810Putative ubiE/COQ5 methyltransferase family protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
tgt protein networkhttps://string-db.org/network/309801.trd_0811Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...]
trd_0812 protein networkhttps://string-db.org/network/309801.trd_0812Acylphosphatase; Identified by match to protein family HMM PF00708.
trd_0813 protein networkhttps://string-db.org/network/309801.trd_0813UDP-glucose 6-dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03720; matc [...]
acpS protein networkhttps://string-db.org/network/309801.trd_0814Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
nnrE protein networkhttps://string-db.org/network/309801.trd_0815Protein of unknown function:YjeF-related protein, N-terminal; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX [...]
trd_0816 protein networkhttps://string-db.org/network/309801.trd_0816IMP dehydrogenase; Identified by match to protein family HMM PF00571.
trd_0817 protein networkhttps://string-db.org/network/309801.trd_0817DNA binding domain, excisionase family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764.
trd_0818 protein networkhttps://string-db.org/network/309801.trd_0818Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753.
trd_0819 protein networkhttps://string-db.org/network/309801.trd_0819Conserved hypothetical protein TIGR00044; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
trd_0820 protein networkhttps://string-db.org/network/309801.trd_0820Conserved hypothetical protein TIGR00726; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.
trd_0821 protein networkhttps://string-db.org/network/309801.trd_0821Putative acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...]
trd_0822 protein networkhttps://string-db.org/network/309801.trd_0822Hypothetical protein; Identified by glimmer; putative.
nfi protein networkhttps://string-db.org/network/309801.trd_0823Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the int [...]
fmt protein networkhttps://string-db.org/network/309801.trd_0824methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
trd_0825 protein networkhttps://string-db.org/network/309801.trd_0825Putative membrane protein.
trd_0826 protein networkhttps://string-db.org/network/309801.trd_0826Putative membrane protein.
infC protein networkhttps://string-db.org/network/309801.trd_0827Translation initiation factor IF-3; Identified by match to protein family HMM PF00707; Belongs to the IF-3 family.
rpmI protein networkhttps://string-db.org/network/309801.trd_0828Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
rplT protein networkhttps://string-db.org/network/309801.trd_0829Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...]
trd_0830 protein networkhttps://string-db.org/network/309801.trd_0830Possible 23S rRNA methyltransferase tsnR; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; Belongs to the class IV-like SAM-binding methyltransferase superf [...]
trd_0831 protein networkhttps://string-db.org/network/309801.trd_0831DNA-binding protein HU 1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
gyrB protein networkhttps://string-db.org/network/309801.trd_0832DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
trd_0833 protein networkhttps://string-db.org/network/309801.trd_0833Putative membrane protein.
trd_0834 protein networkhttps://string-db.org/network/309801.trd_0834Domain of unknown function (DUF1025) superfamily; Identified by match to protein family HMM PF06262.
trd_0835 protein networkhttps://string-db.org/network/309801.trd_0835PbpA; Identified by match to protein family HMM PF00905.
trd_0836 protein networkhttps://string-db.org/network/309801.trd_0836Cell division membrane protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
mtaP protein networkhttps://string-db.org/network/309801.trd_0837Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a [...]
trd_0838 protein networkhttps://string-db.org/network/309801.trd_0838Hypothetical protein; Identified by glimmer; putative.
trd_0839 protein networkhttps://string-db.org/network/309801.trd_0839O-Antigen Polymerase family; Identified by match to protein family HMM PF04932.
trd_0840 protein networkhttps://string-db.org/network/309801.trd_0840UDP-glucuronate decarboxylase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
trd_0841 protein networkhttps://string-db.org/network/309801.trd_0841O-Antigen Polymerase family; Identified by match to protein family HMM PF04932.
trd_0842 protein networkhttps://string-db.org/network/309801.trd_0842Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374.
trd_0843 protein networkhttps://string-db.org/network/309801.trd_0843AprM; Identified by match to protein family HMM PF00534.
trd_0844 protein networkhttps://string-db.org/network/309801.trd_0844Hypothetical protein; Identified by glimmer; putative.
trd_0845 protein networkhttps://string-db.org/network/309801.trd_0845Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.
trd_0846 protein networkhttps://string-db.org/network/309801.trd_0846Putative lipoprotein; Identified by match to protein family HMM PF01551.
trd_0847 protein networkhttps://string-db.org/network/309801.trd_0847DNA polymerase III, delta subunit superfamily; Identified by match to protein family HMM PF06144.
rpsT protein networkhttps://string-db.org/network/309801.trd_084830S ribosomal protein-like protein; Binds directly to 16S ribosomal RNA.
trd_0849 protein networkhttps://string-db.org/network/309801.trd_0849Hypothetical protein; Identified by glimmer; putative.
mviN protein networkhttps://string-db.org/network/309801.trd_0850Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
lepA protein networkhttps://string-db.org/network/309801.trd_0851GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
trd_0852 protein networkhttps://string-db.org/network/309801.trd_0852Putative tetrapyrrole (corrin/porphyrin) methylases; Identified by match to protein family HMM PF00590; match to protein family HMM PF03819; match to protein family HMM TIGR00444.
aspS protein networkhttps://string-db.org/network/309801.trd_0853aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
trd_0854 protein networkhttps://string-db.org/network/309801.trd_0854Probable manganese catalase; Identified by match to protein family HMM PF05067.
trd_0859 protein networkhttps://string-db.org/network/309801.trd_0859Putative IolC myo-catabolism protein.
hflX protein networkhttps://string-db.org/network/309801.trd_0861Putative GTPase of unknown function subfamily; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC cla [...]
trd_0862 protein networkhttps://string-db.org/network/309801.trd_0862Roadblock/LC7 domain superfamily; Identified by match to protein family HMM PF03259.
purM protein networkhttps://string-db.org/network/309801.trd_0863Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.
trd_0864 protein networkhttps://string-db.org/network/309801.trd_0864GTP-binding domain protein.
trd_0865 protein networkhttps://string-db.org/network/309801.trd_0865Putative exopolyphosphatase.
trd_0866 protein networkhttps://string-db.org/network/309801.trd_0866Conserved hypothetical protein.
purH protein networkhttps://string-db.org/network/309801.trd_0867Bifunctional purine biosynthesis protein PurH; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355.
trd_0868 protein networkhttps://string-db.org/network/309801.trd_0868Conserved hypothetical protein.
trd_0869 protein networkhttps://string-db.org/network/309801.trd_0869Conserved hypothetical protein.
trd_0870 protein networkhttps://string-db.org/network/309801.trd_0870G5 domain family.
trd_0871 protein networkhttps://string-db.org/network/309801.trd_0871Putative endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.
greA protein networkhttps://string-db.org/network/309801.trd_0873Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
lysS protein networkhttps://string-db.org/network/309801.trd_0874lysyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthe [...]
trd_0875 protein networkhttps://string-db.org/network/309801.trd_0875Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
trd_0876 protein networkhttps://string-db.org/network/309801.trd_0876Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
trd_0878 protein networkhttps://string-db.org/network/309801.trd_0878Polyamine ABC trasnporter, periplasmic polyamine-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
trd_0879 protein networkhttps://string-db.org/network/309801.trd_0879Peptidase family M20/M25/M40.
trd_0880 protein networkhttps://string-db.org/network/309801.trd_0880Putative dehydrogenase protein; Identified by match to protein family HMM PF01266.
fbpC protein networkhttps://string-db.org/network/309801.trd_0881ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
accA-2 protein networkhttps://string-db.org/network/309801.trd_0882Putative carboxyltransferase subunit of acetyl-CoA carboxylase; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on it [...]
trd_0883 protein networkhttps://string-db.org/network/309801.trd_0883Hypothetical protein; Identified by glimmer; putative.
otsB protein networkhttps://string-db.org/network/309801.trd_0884Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
trd_0885 protein networkhttps://string-db.org/network/309801.trd_0885Conserved hypothetical protein.
trd_0886 protein networkhttps://string-db.org/network/309801.trd_0886Transporter, major facilitator family; Identified by match to protein family HMM PF07690.
trd_0887 protein networkhttps://string-db.org/network/309801.trd_0887Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
trd_0888 protein networkhttps://string-db.org/network/309801.trd_0888CBS domain protein/ACT domain protein; Identified by match to protein family HMM PF00571.
trd_0889 protein networkhttps://string-db.org/network/309801.trd_0889Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
trd_0890 protein networkhttps://string-db.org/network/309801.trd_0890Protein of unknown function (DUF503) superfamily; Identified by match to protein family HMM PF04456.
trd_0891 protein networkhttps://string-db.org/network/309801.trd_0891Hypothetical protein; Identified by glimmer; putative.
trd_0892 protein networkhttps://string-db.org/network/309801.trd_0892Hypothetical protein; Identified by glimmer; putative.
trd_0893 protein networkhttps://string-db.org/network/309801.trd_0893DnaJ domain protein; Identified by match to protein family HMM PF00226.
trd_0894 protein networkhttps://string-db.org/network/309801.trd_0894Acetolactate synthase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
trd_0895 protein networkhttps://string-db.org/network/309801.trd_0895Hypothetical protein; Identified by glimmer; putative.
trd_0898 protein networkhttps://string-db.org/network/309801.trd_0898Hypothetical protein; Identified by glimmer; putative.
trd_0899 protein networkhttps://string-db.org/network/309801.trd_0899Putative 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family.
fhs protein networkhttps://string-db.org/network/309801.trd_0900Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.
trd_0901 protein networkhttps://string-db.org/network/309801.trd_0901Putative aminomethyltransferase; Belongs to the GcvT family.
trd_0902 protein networkhttps://string-db.org/network/309801.trd_0902Putative ABC transporter substrate-binding protein; Identified by match to protein family HMM PF09084.
trd_0903 protein networkhttps://string-db.org/network/309801.trd_0903Conserved hypothetical protein.
trd_0904 protein networkhttps://string-db.org/network/309801.trd_0904Identified by match to protein family HMM PF02585.
trd_0905 protein networkhttps://string-db.org/network/309801.trd_0905Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737.
trd_0906 protein networkhttps://string-db.org/network/309801.trd_0906Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.
trd_0907 protein networkhttps://string-db.org/network/309801.trd_0907Polyglutamate synthase CapA.
trd_0909 protein networkhttps://string-db.org/network/309801.trd_0909Hypothetical protein; Identified by glimmer; putative.
trd_0910 protein networkhttps://string-db.org/network/309801.trd_0910Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
trd_0911 protein networkhttps://string-db.org/network/309801.trd_0911Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be me [...]
trd_0912 protein networkhttps://string-db.org/network/309801.trd_0912Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
trd_0913 protein networkhttps://string-db.org/network/309801.trd_0913Conserved hypothetical protein; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655.
trd_0916 protein networkhttps://string-db.org/network/309801.trd_0916GDP-6-deoxy-D-lyxo-4-hexulose reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM P [...]
metK protein networkhttps://string-db.org/network/309801.trd_0917S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...]
ahcY protein networkhttps://string-db.org/network/309801.trd_0918Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
mtnA protein networkhttps://string-db.org/network/309801.trd_0919Initiation factor 2b family protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
aroK protein networkhttps://string-db.org/network/309801.trd_09203-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquin [...]
mdh protein networkhttps://string-db.org/network/309801.trd_0921Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
trd_0922 protein networkhttps://string-db.org/network/309801.trd_0922Integral membrane protein DUF6; Identified by match to protein family HMM PF00892.
trd_0923 protein networkhttps://string-db.org/network/309801.trd_0923Probable molybdopterin biosynthesis moea protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
trd_0924 protein networkhttps://string-db.org/network/309801.trd_0924Putative ROK-family transcriptional regulator; Identified by match to protein family HMM PF00480.
trd_0925 protein networkhttps://string-db.org/network/309801.trd_0925Hypothetical protein; Identified by glimmer; putative.
trd_0926 protein networkhttps://string-db.org/network/309801.trd_0926Hypothetical protein; Identified by glimmer; putative.
trd_0927 protein networkhttps://string-db.org/network/309801.trd_0927Hypothetical protein; Identified by glimmer; putative.
trd_0928 protein networkhttps://string-db.org/network/309801.trd_0928Phycocyanin alpha phycocyanobilin lyase related protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
trd_0929 protein networkhttps://string-db.org/network/309801.trd_0929Identified by match to protein family HMM PF02388.
murE protein networkhttps://string-db.org/network/309801.trd_0930UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the bi [...]
trd_0931 protein networkhttps://string-db.org/network/309801.trd_0931Acylaminoacyl-peptidase; Identified by match to protein family HMM PF07676.
trd_0932 protein networkhttps://string-db.org/network/309801.trd_0932Hypothetical protein; Identified by glimmer; putative.
trd_0935 protein networkhttps://string-db.org/network/309801.trd_0935Hypothetical protein; Identified by glimmer; putative.
trd_0936 protein networkhttps://string-db.org/network/309801.trd_0936Putative glutathione-dependent formaldehyde dehydrogenase.
trd_0937 protein networkhttps://string-db.org/network/309801.trd_0937Hypothetical protein; Identified by glimmer; putative.
trd_0940 protein networkhttps://string-db.org/network/309801.trd_0940Putative serine/threonine protein phosphatase; Identified by match to protein family HMM PF00149.
rsfS protein networkhttps://string-db.org/network/309801.trd_0942Domain of unknown function DUF143 superfamily; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents assoc [...]
trd_0943 protein networkhttps://string-db.org/network/309801.trd_0943Conserved hypothetical protein.
trd_0944 protein networkhttps://string-db.org/network/309801.trd_0944Putative trehalose phosphorylase; Identified by match to protein family HMM PF00534.
pncB protein networkhttps://string-db.org/network/309801.trd_0945Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicot [...]
trd_0946 protein networkhttps://string-db.org/network/309801.trd_0946Putative RNA polymerase sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937.
trd_0947 protein networkhttps://string-db.org/network/309801.trd_0947Hypothetical protein; Identified by glimmer; putative.
trd_0948 protein networkhttps://string-db.org/network/309801.trd_0948Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
trd_0949 protein networkhttps://string-db.org/network/309801.trd_0949Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precur [...]
trd_0950 protein networkhttps://string-db.org/network/309801.trd_0950Conserved hypothetical protein.
trd_0951 protein networkhttps://string-db.org/network/309801.trd_0951Peptidase family T4; Identified by match to protein family HMM PF03576.
trd_0952 protein networkhttps://string-db.org/network/309801.trd_0952Putative conserved protein; Identified by match to protein family HMM PF01261.
rpsI protein networkhttps://string-db.org/network/309801.trd_0953Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.
rplM protein networkhttps://string-db.org/network/309801.trd_0954Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...]
truA protein networkhttps://string-db.org/network/309801.trd_0955tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
rplQ protein networkhttps://string-db.org/network/309801.trd_0956Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.
rpoA protein networkhttps://string-db.org/network/309801.trd_0957DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsD protein networkhttps://string-db.org/network/309801.trd_0958Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/309801.trd_0959Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs t [...]
rpsM protein networkhttps://string-db.org/network/309801.trd_0960Ribosomal protein S13p/S18e; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein [...]
rpmJ protein networkhttps://string-db.org/network/309801.trd_0961Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.
infA protein networkhttps://string-db.org/network/309801.trd_0962Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
map protein networkhttps://string-db.org/network/309801.trd_0963Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
adk protein networkhttps://string-db.org/network/309801.trd_0964Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
secY protein networkhttps://string-db.org/network/309801.trd_0965Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...]
rplO protein networkhttps://string-db.org/network/309801.trd_0966Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpmD protein networkhttps://string-db.org/network/309801.trd_0967Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.
rpsE protein networkhttps://string-db.org/network/309801.trd_0968Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
rplR protein networkhttps://string-db.org/network/309801.trd_0969Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
rplF protein networkhttps://string-db.org/network/309801.trd_097050S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rpsH protein networkhttps://string-db.org/network/309801.trd_0971Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...]
rplE protein networkhttps://string-db.org/network/309801.trd_097250S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...]
rplX protein networkhttps://string-db.org/network/309801.trd_0973Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplN protein networkhttps://string-db.org/network/309801.trd_0974Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/309801.trd_097530S ribosomal subunit protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/309801.trd_097650S ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/309801.trd_0977Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/309801.trd_0978Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/309801.trd_0979Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S as [...]
rpsS protein networkhttps://string-db.org/network/309801.trd_0980Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/309801.trd_0981Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...]
rplW protein networkhttps://string-db.org/network/309801.trd_0982Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...]
rplD protein networkhttps://string-db.org/network/309801.trd_0983Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/309801.trd_0984Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosom [...]
rpsJ protein networkhttps://string-db.org/network/309801.trd_0985Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
tuf-2 protein networkhttps://string-db.org/network/309801.trd_0986Translation elongation factor Tu; Identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR0023 [...]
fusA protein networkhttps://string-db.org/network/309801.trd_0987Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/309801.trd_0988Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...]
rpsL protein networkhttps://string-db.org/network/309801.trd_0989Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
rpoC protein networkhttps://string-db.org/network/309801.trd_0990DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/309801.trd_0991DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
trd_0992 protein networkhttps://string-db.org/network/309801.trd_0992Hypothetical protein; Identified by glimmer; putative.
trd_0994 protein networkhttps://string-db.org/network/309801.trd_0994Hypothetical protein; Identified by glimmer; putative.
trd_0995 protein networkhttps://string-db.org/network/309801.trd_0995Protein of unknown function, DUF583 family; Identified by match to protein family HMM PF04519.
trd_0996 protein networkhttps://string-db.org/network/309801.trd_0996Protein of unknown function; Identified by match to protein family HMM PF04519.
trd_0997 protein networkhttps://string-db.org/network/309801.trd_0997Hypothetical protein; Identified by glimmer; putative.
rpsB protein networkhttps://string-db.org/network/309801.trd_0998Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.
tsf protein networkhttps://string-db.org/network/309801.trd_0999Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
pyrH protein networkhttps://string-db.org/network/309801.trd_1000Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
frr protein networkhttps://string-db.org/network/309801.trd_1001Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
uppS protein networkhttps://string-db.org/network/309801.trd_1002Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
cdsA protein networkhttps://string-db.org/network/309801.trd_1003Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family.
trd_1004 protein networkhttps://string-db.org/network/309801.trd_1004Conserved hypothetical protein.
dxr protein networkhttps://string-db.org/network/309801.trd_10051-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
trd_1007 protein networkhttps://string-db.org/network/309801.trd_1007Uncharacterized ACR; COG1430; identified by match to protein family HMM PF02643.
trd_1008 protein networkhttps://string-db.org/network/309801.trd_1008Copper resistance protein CopC; Identified by match to protein family HMM PF04234; match to protein family HMM PF05425.
trd_1009 protein networkhttps://string-db.org/network/309801.trd_1009Type II secretion system protein; Identified by match to protein family HMM PF00482.
trd_1010 protein networkhttps://string-db.org/network/309801.trd_1010Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.
trd_1011 protein networkhttps://string-db.org/network/309801.trd_1011CpaF; Identified by match to protein family HMM PF00437.
trd_1012 protein networkhttps://string-db.org/network/309801.trd_1012Putative two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01656.
trd_1013 protein networkhttps://string-db.org/network/309801.trd_1013Putative membrane fimbriae assembly protein; Identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177.
trd_1014 protein networkhttps://string-db.org/network/309801.trd_1014Family of unknown function (DUF470) family; Identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; match to protein family HM [...]
trd_1021 protein networkhttps://string-db.org/network/309801.trd_1021Hypothetical protein; Identified by glimmer; putative.
trd_1022 protein networkhttps://string-db.org/network/309801.trd_1022Probable glutamine amidotransferase; Identified by match to protein family HMM PF00117; match to protein family HMM PF07722.
lon protein networkhttps://string-db.org/network/309801.trd_1023ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...]
trd_1024 protein networkhttps://string-db.org/network/309801.trd_1024Putative heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
trd_1025 protein networkhttps://string-db.org/network/309801.trd_1025UbiA prenyltransferase:PepSY-associated TM helix; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family.
trd_1026 protein networkhttps://string-db.org/network/309801.trd_1026Conserved hypothetical protein.
trd_1027 protein networkhttps://string-db.org/network/309801.trd_1027Heptaprenyl diphosphate synthase component II; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
trd_1028 protein networkhttps://string-db.org/network/309801.trd_1028Hypothetical protein; Identified by glimmer; putative.
trd_1029 protein networkhttps://string-db.org/network/309801.trd_1029Inosine-uridine preferring nucleoside hydrolase; Identified by match to protein family HMM PF01156.
trd_1030 protein networkhttps://string-db.org/network/309801.trd_1030Hypothetical protein; Identified by glimmer; putative.
trd_1031 protein networkhttps://string-db.org/network/309801.trd_1031Putative hydroxypyruvate reductase; Identified by match to protein family HMM PF05161.
trd_1032 protein networkhttps://string-db.org/network/309801.trd_1032Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
lspA protein networkhttps://string-db.org/network/309801.trd_1033Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
radA protein networkhttps://string-db.org/network/309801.trd_1034DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
trd_1035 protein networkhttps://string-db.org/network/309801.trd_1035ClpC ATPase; Identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein fam [...]
trd_1036 protein networkhttps://string-db.org/network/309801.trd_103630S ribosomal protein S1; Identified by match to protein family HMM PF00575.
trd_1037 protein networkhttps://string-db.org/network/309801.trd_1037Soluble hydrogenase 42 kDa subunit; Identified by match to protein family HMM PF00266.
trd_1038 protein networkhttps://string-db.org/network/309801.trd_1038O-Antigen Polymerase family; Identified by match to protein family HMM PF04932.
trd_1039 protein networkhttps://string-db.org/network/309801.trd_1039Putative transcriptional regulator superfamily; Identified by match to protein family HMM PF01638.
trd_1040 protein networkhttps://string-db.org/network/309801.trd_1040Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015.
moaA protein networkhttps://string-db.org/network/309801.trd_1041Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
trd_1042 protein networkhttps://string-db.org/network/309801.trd_1042GlcNAc-PI de-N-acetylase family; Identified by match to protein family HMM PF02585.
hisS protein networkhttps://string-db.org/network/309801.trd_1043histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.
trd_1044 protein networkhttps://string-db.org/network/309801.trd_1044Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
trd_1045 protein networkhttps://string-db.org/network/309801.trd_1045Deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
trd_1046 protein networkhttps://string-db.org/network/309801.trd_1046Conserved hypothetical protein TIGR00252; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family.
rnhB protein networkhttps://string-db.org/network/309801.trd_1047Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
rplS protein networkhttps://string-db.org/network/309801.trd_1048Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
trd_1049 protein networkhttps://string-db.org/network/309801.trd_10495-methyltetrahydrofolate S-homocysteine methyltransferase; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574.
trd_1050 protein networkhttps://string-db.org/network/309801.trd_1050Group3 RNA polymerase sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02 [...]
trd_1051 protein networkhttps://string-db.org/network/309801.trd_1051Hypothetical protein; Identified by glimmer; putative.
trd_1052 protein networkhttps://string-db.org/network/309801.trd_1052CAAX amino terminal protease family; Identified by match to protein family HMM PF02517.
glyS protein networkhttps://string-db.org/network/309801.trd_1053glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
trd_1054 protein networkhttps://string-db.org/network/309801.trd_1054Stage 0 sporulation protein J; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
trd_1055 protein networkhttps://string-db.org/network/309801.trd_1055Tyrosine recombinase xerD; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
ald protein networkhttps://string-db.org/network/309801.trd_1056Alanine dehydrogenase; Identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518.
trd_1057 protein networkhttps://string-db.org/network/309801.trd_1057Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054.
ispG protein networkhttps://string-db.org/network/309801.trd_10584-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...]
trd_1059 protein networkhttps://string-db.org/network/309801.trd_1059Kinase, pfkB family; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
ppc protein networkhttps://string-db.org/network/309801.trd_1060Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
trd_1061 protein networkhttps://string-db.org/network/309801.trd_1061PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF03130; match to protein family HMM PF08331.
coaX protein networkhttps://string-db.org/network/309801.trd_1062Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
trd_1063 protein networkhttps://string-db.org/network/309801.trd_1063Putative sgc region protein sgcX; Identified by match to protein family HMM PF05343.
fusA-2 protein networkhttps://string-db.org/network/309801.trd_1064Translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; [...]
trd_1065 protein networkhttps://string-db.org/network/309801.trd_1065Ribonuclease HI.
thrS protein networkhttps://string-db.org/network/309801.trd_1067threonyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; Belon [...]
trd_1068 protein networkhttps://string-db.org/network/309801.trd_1068Identified by match to protein family HMM PF01244.
trd_1069 protein networkhttps://string-db.org/network/309801.trd_1069Putative methyltransferase; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_1070 protein networkhttps://string-db.org/network/309801.trd_1070N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; Belongs to the HAD-like hydrolase superfam [...]
trd_1071 protein networkhttps://string-db.org/network/309801.trd_1071Probable peptidic bond hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910.
trd_1072 protein networkhttps://string-db.org/network/309801.trd_1072Domain of unknown function protein; Identified by match to protein family HMM PF03737.
trd_1073 protein networkhttps://string-db.org/network/309801.trd_1073Putative lipoprotein.
trd_1074 protein networkhttps://string-db.org/network/309801.trd_1074ABC-2 type transporter superfamily; Identified by match to protein family HMM PF01061.
trd_1075 protein networkhttps://string-db.org/network/309801.trd_1075Multidrug ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
trd_1076 protein networkhttps://string-db.org/network/309801.trd_1076Possible transcriptional regulatory protein; Identified by match to protein family HMM PF01047.
trd_1077 protein networkhttps://string-db.org/network/309801.trd_1077Conserved hypothetical protein.
moaC protein networkhttps://string-db.org/network/309801.trd_1078Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC fami [...]
mnmA protein networkhttps://string-db.org/network/309801.trd_1079tRNA methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
trd_1080 protein networkhttps://string-db.org/network/309801.trd_1080Aminotransferase, class III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
greA-2 protein networkhttps://string-db.org/network/309801.trd_1081Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
trd_1082 protein networkhttps://string-db.org/network/309801.trd_1082Putative YbaK / prolyl-tRNA synthetases associated domain; Identified by match to protein family HMM PF04073.
trd_1083 protein networkhttps://string-db.org/network/309801.trd_1083Hypothetical sugar kinase; Identified by match to protein family HMM PF00294.
trd_1084 protein networkhttps://string-db.org/network/309801.trd_1084Protein jag; Identified by match to protein family HMM PF01424.
trd_1085 protein networkhttps://string-db.org/network/309801.trd_1085Inner membrane protein oxaA; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592.
trd_1086 protein networkhttps://string-db.org/network/309801.trd_1086Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
rnpA protein networkhttps://string-db.org/network/309801.trd_1087Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
rpmH protein networkhttps://string-db.org/network/309801.trd_1088Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.
trd_1089 protein networkhttps://string-db.org/network/309801.trd_1089Beta-lactamase; Identified by match to protein family HMM PF00144.
trd_1090 protein networkhttps://string-db.org/network/309801.trd_1090GAF domain protein; Identified by match to protein family HMM PF01590.
trd_1091 protein networkhttps://string-db.org/network/309801.trd_1091Response regulator; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966; match to protein family HMM TIGR00277.
trd_1092 protein networkhttps://string-db.org/network/309801.trd_1092Putative major facilitator superfamily; Identified by match to protein family HMM PF07690.
ileS protein networkhttps://string-db.org/network/309801.trd_1093isoleucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM TIGR00392.
trd_1094 protein networkhttps://string-db.org/network/309801.trd_1094Conserved hypothetical protein; Identified by match to protein family HMM PF08242.
trd_1095 protein networkhttps://string-db.org/network/309801.trd_1095Identified by match to protein family HMM PF04909.
pfp protein networkhttps://string-db.org/network/309801.trd_10966-phosphofructokinase isozyme 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of AT [...]
trd_1097 protein networkhttps://string-db.org/network/309801.trd_1097Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
murI protein networkhttps://string-db.org/network/309801.trd_1098Aspartate racemase; Identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family.
trd_1099 protein networkhttps://string-db.org/network/309801.trd_1099Hypothetical protein; Identified by glimmer; putative.
trd_1100 protein networkhttps://string-db.org/network/309801.trd_1100Putative FesM; Identified by match to protein family HMM PF00037.
trd_1101 protein networkhttps://string-db.org/network/309801.trd_1101Hypothetical protein; Identified by glimmer; putative.
trd_1102 protein networkhttps://string-db.org/network/309801.trd_1102senC homolog; Identified by match to protein family HMM PF02630.
trd_1103 protein networkhttps://string-db.org/network/309801.trd_1103Taurine--pyruvate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
trd_1104 protein networkhttps://string-db.org/network/309801.trd_1104Hypothetical protein; Identified by glimmer; putative.
trd_1105 protein networkhttps://string-db.org/network/309801.trd_1105Glutamate synthase [nadph] large chain precursor; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein fam [...]
trd_1106 protein networkhttps://string-db.org/network/309801.trd_1106Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.
amt protein networkhttps://string-db.org/network/309801.trd_1107Ammonium transporter; Identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836.
trd_1108 protein networkhttps://string-db.org/network/309801.trd_1108Hypothetical protein; Identified by glimmer; putative.
mutS protein networkhttps://string-db.org/network/309801.trd_1109DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
trd_1110 protein networkhttps://string-db.org/network/309801.trd_1110Putative MFS transporter; Identified by match to protein family HMM PF07690.
trd_1111 protein networkhttps://string-db.org/network/309801.trd_1111Hypothetical protein; Identified by glimmer; putative.
trd_1112 protein networkhttps://string-db.org/network/309801.trd_1112Conserved hypothetical protein.
trd_1113 protein networkhttps://string-db.org/network/309801.trd_1113Putative sodium/solute symporter; Identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
trd_1114 protein networkhttps://string-db.org/network/309801.trd_1114DNA polymerase III epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573.
trd_1115 protein networkhttps://string-db.org/network/309801.trd_1115Hypothetical protein; Identified by glimmer; putative.
trd_1116 protein networkhttps://string-db.org/network/309801.trd_1116CBS domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00571; match to protein family HMM PF03445.
trd_1117 protein networkhttps://string-db.org/network/309801.trd_1117Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501.
trd_1118 protein networkhttps://string-db.org/network/309801.trd_1118YwfM; Identified by match to protein family HMM PF00892.
trd_1119 protein networkhttps://string-db.org/network/309801.trd_1119Penicillin acylase II; Identified by match to protein family HMM PF01804.
trd_1120 protein networkhttps://string-db.org/network/309801.trd_1120Putative membrane protein.
trd_1121 protein networkhttps://string-db.org/network/309801.trd_1121Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF05157.
hemA protein networkhttps://string-db.org/network/309801.trd_1122glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
hemL protein networkhttps://string-db.org/network/309801.trd_1123Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713.
hemB protein networkhttps://string-db.org/network/309801.trd_1124Delta-aminolevulinic acid dehydratase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.
hemD protein networkhttps://string-db.org/network/309801.trd_1125Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
trd_1126 protein networkhttps://string-db.org/network/309801.trd_1126Sulfide dehydrogenase; Identified by match to protein family HMM PF07992.
folE protein networkhttps://string-db.org/network/309801.trd_1127GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.
trd_1128 protein networkhttps://string-db.org/network/309801.trd_1128CDP-alcohol phosphatidyltransferase family; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
trd_1129 protein networkhttps://string-db.org/network/309801.trd_11292,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
trd_1130 protein networkhttps://string-db.org/network/309801.trd_1130Hypothetical protein; Identified by glimmer; putative.
trd_1131 protein networkhttps://string-db.org/network/309801.trd_1131Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.
trd_1132 protein networkhttps://string-db.org/network/309801.trd_1132Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033.
trd_1133 protein networkhttps://string-db.org/network/309801.trd_1133Putative membrane protein.
trd_1134 protein networkhttps://string-db.org/network/309801.trd_1134Putative pyridoxal phosphate-dependent enzyme; Identified by match to protein family HMM PF01212; match to protein family HMM PF03841.
trd_1135 protein networkhttps://string-db.org/network/309801.trd_1135Sugar ABC transportor, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
trd_1136 protein networkhttps://string-db.org/network/309801.trd_1136Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528.
trd_1137 protein networkhttps://string-db.org/network/309801.trd_1137Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528.
trd_1138 protein networkhttps://string-db.org/network/309801.trd_1138Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409.
trd_1139 protein networkhttps://string-db.org/network/309801.trd_1139Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501.
trd_1140 protein networkhttps://string-db.org/network/309801.trd_1140Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
tal protein networkhttps://string-db.org/network/309801.trd_1141Transaldolase and glucose-6-phosphate isomerase bifunctional protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
gnd protein networkhttps://string-db.org/network/309801.trd_11426-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein f [...]
zwf protein networkhttps://string-db.org/network/309801.trd_1143Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
trd_1144 protein networkhttps://string-db.org/network/309801.trd_1144Conserved hypothetical protein.
trd_1145 protein networkhttps://string-db.org/network/309801.trd_1145Putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein; Identified by match to protein family HMM PF01547.
pgl protein networkhttps://string-db.org/network/309801.trd_11466-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
trd_1147 protein networkhttps://string-db.org/network/309801.trd_1147Protein of unknown function (DUF420) superfamily; Identified by match to protein family HMM PF04238.
trd_1148 protein networkhttps://string-db.org/network/309801.trd_1148Phosphonoacetate hydrolase; Identified by match to protein family HMM PF01663.
trd_1149 protein networkhttps://string-db.org/network/309801.trd_1149Probable nodulation ATP-binding ABC transporter protein; Identified by match to protein family HMM PF00005.
trd_1150 protein networkhttps://string-db.org/network/309801.trd_1150Identified by match to protein family HMM PF01061; similar to B1496_F2_59.
trd_1151 protein networkhttps://string-db.org/network/309801.trd_1151Putative conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF01980; match to protein family HMM TIGR00104.
trd_1152 protein networkhttps://string-db.org/network/309801.trd_1152Nitrate reductase (NAD(P)H); Identified by match to protein family HMM PF00174; match to protein family HMM PF03404.
trd_1153 protein networkhttps://string-db.org/network/309801.trd_1153Hypothetical protein; Identified by glimmer; putative.
trd_1154 protein networkhttps://string-db.org/network/309801.trd_1154Hypothetical protein; Identified by glimmer; putative.
trd_1155 protein networkhttps://string-db.org/network/309801.trd_1155Hypothetical protein; Identified by glimmer; putative.
rplY protein networkhttps://string-db.org/network/309801.trd_1156Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein b [...]
trd_1157 protein networkhttps://string-db.org/network/309801.trd_1157Multidrug-efflux transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
trd_1158 protein networkhttps://string-db.org/network/309801.trd_1158Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
trd_1159 protein networkhttps://string-db.org/network/309801.trd_1159Phytoene synthetase; Identified by match to protein family HMM PF00494.
trd_1160 protein networkhttps://string-db.org/network/309801.trd_1160Conserved hypothetical protein.
trd_1161 protein networkhttps://string-db.org/network/309801.trd_1161Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
trd_1162 protein networkhttps://string-db.org/network/309801.trd_1162Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240.
trd_1163 protein networkhttps://string-db.org/network/309801.trd_1163Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
ispH protein networkhttps://string-db.org/network/309801.trd_11644-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
trd_1165 protein networkhttps://string-db.org/network/309801.trd_1165Glycolate oxidase subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913.
dnaA protein networkhttps://string-db.org/network/309801.trd_1166Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
trd_1167 protein networkhttps://string-db.org/network/309801.trd_1167Conserved hypothetical protein.
trd_1168 protein networkhttps://string-db.org/network/309801.trd_1168Hypothetical protein; Identified by glimmer; putative.
trd_1169 protein networkhttps://string-db.org/network/309801.trd_1169Regulatory protein, MarR; Identified by match to protein family HMM PF01022; match to protein family HMM PF01047; match to protein family HMM PF01978.
trd_1170 protein networkhttps://string-db.org/network/309801.trd_1170Putative drug transport protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
trd_1171 protein networkhttps://string-db.org/network/309801.trd_1171Identified by match to protein family HMM PF02566.
trd_1172 protein networkhttps://string-db.org/network/309801.trd_1172Putative thiosulfate sulfurtransferase precursor; Identified by match to protein family HMM PF00581.
trd_1173 protein networkhttps://string-db.org/network/309801.trd_1173Identified by match to protein family HMM PF01592.
trd_1174 protein networkhttps://string-db.org/network/309801.trd_1174Identified by match to protein family HMM PF05694.
trd_1175 protein networkhttps://string-db.org/network/309801.trd_1175Putative membrane protein.
trd_1176 protein networkhttps://string-db.org/network/309801.trd_1176Phosphoesterase PHP, N-terminal; Identified by match to protein family HMM PF02811.
trd_1177 protein networkhttps://string-db.org/network/309801.trd_1177Conserved hypothetical protein TIGR00486; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486.
glmM protein networkhttps://string-db.org/network/309801.trd_1178Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
trd_1179 protein networkhttps://string-db.org/network/309801.trd_1179Protein of unknown function (DUF402) family; Identified by match to protein family HMM PF04167.
trd_1180 protein networkhttps://string-db.org/network/309801.trd_1180Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764.
trd_1181 protein networkhttps://string-db.org/network/309801.trd_1181Hypothetical protein; Identified by glimmer; putative.
trd_1182 protein networkhttps://string-db.org/network/309801.trd_1182Alanine racemase, N-terminal domain family; Identified by match to protein family HMM PF01168.
purN protein networkhttps://string-db.org/network/309801.trd_1183Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
guaA protein networkhttps://string-db.org/network/309801.trd_1184GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
trd_1185 protein networkhttps://string-db.org/network/309801.trd_1185Nitrate/nitrite response regulator protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
purD protein networkhttps://string-db.org/network/309801.trd_1186Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR0 [...]
trd_1187 protein networkhttps://string-db.org/network/309801.trd_1187Putative hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
ade protein networkhttps://string-db.org/network/309801.trd_1190Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
trd_1191 protein networkhttps://string-db.org/network/309801.trd_1191Hypothetical protein; Identified by glimmer; putative.
trd_1192 protein networkhttps://string-db.org/network/309801.trd_1192Putative MerR-family transcriptional regulator; Identified by match to protein family HMM PF00376.
trd_1193 protein networkhttps://string-db.org/network/309801.trd_1193Conserved hypothetical protein TIGR00259; Identified by match to protein family HMM PF03437; match to protein family HMM TIGR00259.
recJ protein networkhttps://string-db.org/network/309801.trd_1194single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.
trd_1195 protein networkhttps://string-db.org/network/309801.trd_1195Transcriptional repressor; Identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023.
trd_1196 protein networkhttps://string-db.org/network/309801.trd_1196Identified by match to protein family HMM PF00149.
trd_1197 protein networkhttps://string-db.org/network/309801.trd_1197Isoprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
trd_1198 protein networkhttps://string-db.org/network/309801.trd_1198Conserved hypothetical protein; Identified by match to protein family HMM PF08735.
trd_1199 protein networkhttps://string-db.org/network/309801.trd_1199Putative Zn-dependent protease; Identified by match to protein family HMM PF04298.
trd_1200 protein networkhttps://string-db.org/network/309801.trd_1200Hypothetical protein; Identified by glimmer; putative.
clpX protein networkhttps://string-db.org/network/309801.trd_1201ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/309801.trd_1202Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belong [...]
tig protein networkhttps://string-db.org/network/309801.trd_1203Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
trd_1204 protein networkhttps://string-db.org/network/309801.trd_1204Conserved hypothetical protein.
trd_1205 protein networkhttps://string-db.org/network/309801.trd_1205Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF06240.
trd_1206 protein networkhttps://string-db.org/network/309801.trd_1206[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
trd_1207 protein networkhttps://string-db.org/network/309801.trd_1207Oxidoreductase, large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
trd_1208 protein networkhttps://string-db.org/network/309801.trd_1208Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
trd_1209 protein networkhttps://string-db.org/network/309801.trd_1209Putative ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728.
trd_1210 protein networkhttps://string-db.org/network/309801.trd_1210VWA domain containing CoxE-like protein; Identified by match to protein family HMM PF05762.
trd_1211 protein networkhttps://string-db.org/network/309801.trd_1211Putative xanthine dehydrogenase accessory factor subfamily, putative; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to ex [...]
trd_1212 protein networkhttps://string-db.org/network/309801.trd_1212Putative xanthine dehydrogenase accessory factor subfamily, putative; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to ex [...]
trd_1213 protein networkhttps://string-db.org/network/309801.trd_1213Conserved hypothetical protein.
trd_1214 protein networkhttps://string-db.org/network/309801.trd_1214Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
trd_1215 protein networkhttps://string-db.org/network/309801.trd_1215Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
trd_1216 protein networkhttps://string-db.org/network/309801.trd_1216Hypothetical protein; Identified by glimmer; putative.
trd_1217 protein networkhttps://string-db.org/network/309801.trd_1217Identified by match to protein family HMM PF01578; match to protein family HMM TIGR01191.
trd_1218 protein networkhttps://string-db.org/network/309801.trd_1218Identified by match to protein family HMM PF01061.
ccmA protein networkhttps://string-db.org/network/309801.trd_1219Heme ABC exporter, ATP-binding protein CcmA; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01189.
trd_1220 protein networkhttps://string-db.org/network/309801.trd_1220Hypothetical protein; Identified by glimmer; putative.
trd_1221 protein networkhttps://string-db.org/network/309801.trd_1221CcmH, cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
trd_1222 protein networkhttps://string-db.org/network/309801.trd_1222Cytochrome C-type biogenesis protein; Identified by match to protein family HMM PF01578.
trd_1223 protein networkhttps://string-db.org/network/309801.trd_1223Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in [...]
trd_1224 protein networkhttps://string-db.org/network/309801.trd_1224Hypothetical protein; Identified by glimmer; putative.
trd_1225 protein networkhttps://string-db.org/network/309801.trd_1225C-type cytochrome biogenesis protein/thioredoxin dsbE; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.
murA protein networkhttps://string-db.org/network/309801.trd_1226UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
atpC protein networkhttps://string-db.org/network/309801.trd_1227ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
atpD protein networkhttps://string-db.org/network/309801.trd_1228ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase [...]
atpG protein networkhttps://string-db.org/network/309801.trd_1229ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...]
atpA protein networkhttps://string-db.org/network/309801.trd_1230ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains fa [...]
atpH protein networkhttps://string-db.org/network/309801.trd_1231ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...]
atpF protein networkhttps://string-db.org/network/309801.trd_1232ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
atpE protein networkhttps://string-db.org/network/309801.trd_1233ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpB protein networkhttps://string-db.org/network/309801.trd_1234ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
trd_1235 protein networkhttps://string-db.org/network/309801.trd_1235Hypothetical protein; Identified by glimmer; putative.
pyrG protein networkhttps://string-db.org/network/309801.trd_1236CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
trd_1237 protein networkhttps://string-db.org/network/309801.trd_1237Conserved hypothetical protein.
recX protein networkhttps://string-db.org/network/309801.trd_1238Regulatory protein recX; Modulates RecA activity; Belongs to the RecX family.
trd_1239 protein networkhttps://string-db.org/network/309801.trd_1239Uncharacterized ACR; COG1434 superfamily; identified by match to protein family HMM PF02698.
leuS protein networkhttps://string-db.org/network/309801.trd_1240leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs [...]
trd_1241 protein networkhttps://string-db.org/network/309801.trd_1241Hypothetical protein; Identified by glimmer; putative.
rimO protein networkhttps://string-db.org/network/309801.trd_1243MiaB-like tRNA modifying enzyme YliG, TIGR01125; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
trd_1244 protein networkhttps://string-db.org/network/309801.trd_1244CDP-alcohol phosphatidyltransferase family; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
trd_1245 protein networkhttps://string-db.org/network/309801.trd_1245Protein of unknown function (DUF1648) family; Identified by match to protein family HMM PF07853.
trd_1246 protein networkhttps://string-db.org/network/309801.trd_1246Putative post-translocation molecular chaperone; Identified by match to protein family HMM PF00639.
rpsR protein networkhttps://string-db.org/network/309801.trd_124730S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...]
trd_1248 protein networkhttps://string-db.org/network/309801.trd_1248Single-stranded DNA binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
rpsF protein networkhttps://string-db.org/network/309801.trd_1249Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
trd_1250 protein networkhttps://string-db.org/network/309801.trd_1250Hypothetical protein; Identified by glimmer; putative.
thrB protein networkhttps://string-db.org/network/309801.trd_1251Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
thrC protein networkhttps://string-db.org/network/309801.trd_1252Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
trd_1253 protein networkhttps://string-db.org/network/309801.trd_1253Oligopeptide transport system permease protein appC; Identified by match to protein family HMM PF00528.
trd_1254 protein networkhttps://string-db.org/network/309801.trd_1254Oligopeptide transport system permease protein appB; Identified by match to protein family HMM PF00528.
trd_1255 protein networkhttps://string-db.org/network/309801.trd_1255Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.
trd_1256 protein networkhttps://string-db.org/network/309801.trd_1256Hypothetical protein; Identified by glimmer; putative.
trd_1257 protein networkhttps://string-db.org/network/309801.trd_1257Conserved hypothetical protein.
glgA protein networkhttps://string-db.org/network/309801.trd_1258Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
glgC protein networkhttps://string-db.org/network/309801.trd_1259Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between AT [...]
accD protein networkhttps://string-db.org/network/309801.trd_1260acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carr [...]
accA protein networkhttps://string-db.org/network/309801.trd_1261acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its c [...]
trd_1262 protein networkhttps://string-db.org/network/309801.trd_1262Probable HspC2 heat shock protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
trd_1263 protein networkhttps://string-db.org/network/309801.trd_1263Identified by match to protein family HMM PF00571; match to protein family HMM PF02163; Belongs to the peptidase M50B family.
pyrB protein networkhttps://string-db.org/network/309801.trd_1264Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine c [...]
trd_1265 protein networkhttps://string-db.org/network/309801.trd_1265RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
trd_1266 protein networkhttps://string-db.org/network/309801.trd_1266RecF/RecN/SMC N terminal domain protein; Identified by match to protein family HMM PF02463.
trd_1267 protein networkhttps://string-db.org/network/309801.trd_1267Putative protease/transporter; Identified by match to protein family HMM PF01957.
trd_1268 protein networkhttps://string-db.org/network/309801.trd_1268Mechanosensory protein 2; Identified by match to protein family HMM PF01145.
trd_1269 protein networkhttps://string-db.org/network/309801.trd_1269Protease IV, signal peptide peptidase; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706.
trd_1270 protein networkhttps://string-db.org/network/309801.trd_1270Hypothetical conserved protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/deph [...]
trd_1271 protein networkhttps://string-db.org/network/309801.trd_1271Similar to A. fulgidus predicted coding region.
trd_1272 protein networkhttps://string-db.org/network/309801.trd_1272Putative membrane protein.
trd_1273 protein networkhttps://string-db.org/network/309801.trd_1273Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
trd_1274 protein networkhttps://string-db.org/network/309801.trd_1274Two-component sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
trd_1275 protein networkhttps://string-db.org/network/309801.trd_1275Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
dxs protein networkhttps://string-db.org/network/309801.trd_12761-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
gidB protein networkhttps://string-db.org/network/309801.trd_1277Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
trd_1278 protein networkhttps://string-db.org/network/309801.trd_1278Putative pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to prote [...]
trd_1279 protein networkhttps://string-db.org/network/309801.trd_1279Dipeptide transport system permease protein dppB; Identified by match to protein family HMM PF00528.
trd_1280 protein networkhttps://string-db.org/network/309801.trd_1280Inner membrane ABC transporter permease protein yddQ; Identified by match to protein family HMM PF00528.
trd_1281 protein networkhttps://string-db.org/network/309801.trd_1281Putative oligopeptide ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00496.
trd_1282 protein networkhttps://string-db.org/network/309801.trd_1282Putative arginine deiminase; Identified by match to protein family HMM PF02274.
trd_1283 protein networkhttps://string-db.org/network/309801.trd_1283Putative hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460.
trd_1284 protein networkhttps://string-db.org/network/309801.trd_1284Putative hydroxyindole O-methyltransferase; Identified by match to protein family HMM PF00891; match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_1285 protein networkhttps://string-db.org/network/309801.trd_1285Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; Identified by match to protein family HMM PF00535.
trd_1286 protein networkhttps://string-db.org/network/309801.trd_1286Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_1288 protein networkhttps://string-db.org/network/309801.trd_1288Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00200; Belongs to the CinA family.
ybeY protein networkhttps://string-db.org/network/309801.trd_1289Putative conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the [...]
trd_1290 protein networkhttps://string-db.org/network/309801.trd_12907TM-HD extracellular domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM TIGR00277.
trd_1291 protein networkhttps://string-db.org/network/309801.trd_1291GatB/Yqey domain superfamily; Identified by match to protein family HMM PF02637.
trd_1292 protein networkhttps://string-db.org/network/309801.trd_1292Hypothetical protein; Identified by glimmer; putative.
trd_1294 protein networkhttps://string-db.org/network/309801.trd_1294Putative lipoprotein.
trd_1295 protein networkhttps://string-db.org/network/309801.trd_1295Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_1296 protein networkhttps://string-db.org/network/309801.trd_1296Putative lipoprotein.
trd_1297 protein networkhttps://string-db.org/network/309801.trd_1297Putative membrane protein.
trd_1298 protein networkhttps://string-db.org/network/309801.trd_1298Putative membrane protein.
trd_1299 protein networkhttps://string-db.org/network/309801.trd_1299Glycosyltransferase; Identified by match to protein family HMM PF00534.
groL protein networkhttps://string-db.org/network/309801.trd_1300Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
groS protein networkhttps://string-db.org/network/309801.trd_1301Chaperonin, 10 kDa; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
trd_1302 protein networkhttps://string-db.org/network/309801.trd_1302Hypothetical protein; Identified by glimmer; putative.
trd_1303 protein networkhttps://string-db.org/network/309801.trd_1303Aspartate aminotransferase A; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266.
trd_1304 protein networkhttps://string-db.org/network/309801.trd_1304Hypothetical protein; Identified by glimmer; putative.
selD protein networkhttps://string-db.org/network/309801.trd_1305Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
ksgA protein networkhttps://string-db.org/network/309801.trd_1306Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
ispE protein networkhttps://string-db.org/network/309801.trd_13074-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
trd_1308 protein networkhttps://string-db.org/network/309801.trd_1308Identified by match to protein family HMM PF03061.
trd_1309 protein networkhttps://string-db.org/network/309801.trd_1309Molybdopterin biosynthesis protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
trd_1310 protein networkhttps://string-db.org/network/309801.trd_1310Identified by match to protein family HMM PF01398.
trd_1311 protein networkhttps://string-db.org/network/309801.trd_1311Molybdopterin converting factor, subunit 1; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01687.
trd_1312 protein networkhttps://string-db.org/network/309801.trd_1312Cysteine synthase B; Identified by match to protein family HMM PF00291.
trd_1313 protein networkhttps://string-db.org/network/309801.trd_1313Stk1; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.
trd_1314 protein networkhttps://string-db.org/network/309801.trd_1314Hypothetical protein; Identified by glimmer; putative.
trd_1315 protein networkhttps://string-db.org/network/309801.trd_1315Cytochrome C and Quinol oxidase polypeptide I superfamily; Identified by match to protein family HMM PF00115.
trd_1316 protein networkhttps://string-db.org/network/309801.trd_1316Amino acid permease superfamily; Identified by match to protein family HMM PF00324.
trd_1317 protein networkhttps://string-db.org/network/309801.trd_1317Amino acid permease superfamily; Identified by match to protein family HMM PF00324.
trd_1318 protein networkhttps://string-db.org/network/309801.trd_1318Putative cyclase superfamily; Identified by match to protein family HMM PF04199.
trd_1319 protein networkhttps://string-db.org/network/309801.trd_1319Identified by match to protein family HMM PF00149.
trd_1320 protein networkhttps://string-db.org/network/309801.trd_1320Conserved hypothetical protein.
trd_1321 protein networkhttps://string-db.org/network/309801.trd_1321Putative MOSC domain; Identified by match to protein family HMM PF03473.
trd_1322 protein networkhttps://string-db.org/network/309801.trd_1322Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
trd_1323 protein networkhttps://string-db.org/network/309801.trd_1323Putative gluconokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
folK protein networkhttps://string-db.org/network/309801.trd_13242-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498.
folP protein networkhttps://string-db.org/network/309801.trd_1325Dihydropteroate synthase; Identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496.
folB protein networkhttps://string-db.org/network/309801.trd_1326Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
trd_1327 protein networkhttps://string-db.org/network/309801.trd_1327Putative membrane protein.
trd_1328 protein networkhttps://string-db.org/network/309801.trd_1328Hypothetical protein; Identified by glimmer; putative.
trd_1329 protein networkhttps://string-db.org/network/309801.trd_1329Putative site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
trd_1330 protein networkhttps://string-db.org/network/309801.trd_1330Conserved hypothetical protein.
ggt-3 protein networkhttps://string-db.org/network/309801.trd_1331Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
trd_1332 protein networkhttps://string-db.org/network/309801.trd_1332Hypothetical membrane protein, conserved, family; Identified by match to protein family HMM PF01925.
trd_1333 protein networkhttps://string-db.org/network/309801.trd_1333Conserved hypothetical protein; Identified by match to protein family HMM PF07843.
trd_1334 protein networkhttps://string-db.org/network/309801.trd_1334Hypothetical protein; Identified by glimmer; putative.
trd_1335 protein networkhttps://string-db.org/network/309801.trd_1335Putative Domain of unknown function; Identified by match to protein family HMM PF01925.
trd_1336 protein networkhttps://string-db.org/network/309801.trd_1336Cell envelope-related transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
trd_1337 protein networkhttps://string-db.org/network/309801.trd_1337Copper binding proteins, plastocyanin/azurin family; Identified by match to protein family HMM PF00127.
trd_1338 protein networkhttps://string-db.org/network/309801.trd_1338Putative cytochrome c heme-binding subunit.
trd_1339 protein networkhttps://string-db.org/network/309801.trd_1339Threonine synthase; Identified by match to protein family HMM PF00291.
trd_1340 protein networkhttps://string-db.org/network/309801.trd_1340acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
trd_1341 protein networkhttps://string-db.org/network/309801.trd_1341Appr-1-p processing enzyme family protein; Identified by match to protein family HMM PF01661.
trd_1342 protein networkhttps://string-db.org/network/309801.trd_1342Tartrate dehydrogenase; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR02089.
trd_1343 protein networkhttps://string-db.org/network/309801.trd_1343Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to t [...]
trd_1344 protein networkhttps://string-db.org/network/309801.trd_1344DedA family; Identified by match to protein family HMM PF09335.
trd_1345 protein networkhttps://string-db.org/network/309801.trd_1345Putative dehydrogenase; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560.
trd_1348 protein networkhttps://string-db.org/network/309801.trd_1348Identified by match to protein family HMM PF07883.
metE protein networkhttps://string-db.org/network/309801.trd_13495-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [...]
trd_1350 protein networkhttps://string-db.org/network/309801.trd_1350Hypothetical protein; Identified by glimmer; putative.
trd_1351 protein networkhttps://string-db.org/network/309801.trd_1351Hypothetical protein; Identified by glimmer; putative.
trd_1352 protein networkhttps://string-db.org/network/309801.trd_1352Uncharacterized ACR (DUF711) superfamily; Identified by match to protein family HMM PF05167.
trd_1353 protein networkhttps://string-db.org/network/309801.trd_1353Beta-lactamase; Identified by match to protein family HMM PF00144.
trd_1354 protein networkhttps://string-db.org/network/309801.trd_1354Conserved hypothetical protein; Similar to chain A, Crystal Structure Of The Conserved Protein Tt1542 From Thermus Thermophilus Hb8; identified by match to protein family HMM PF02585.
trd_1355 protein networkhttps://string-db.org/network/309801.trd_1355Putative oxidoreductase.
trd_1356 protein networkhttps://string-db.org/network/309801.trd_1356Hypothetical protein; Identified by glimmer; putative.
trd_1357 protein networkhttps://string-db.org/network/309801.trd_1357Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1358 protein networkhttps://string-db.org/network/309801.trd_1358Putative frnE protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_1359 protein networkhttps://string-db.org/network/309801.trd_1359DoxX subfamily; Identified by match to protein family HMM PF07681.
trd_1360 protein networkhttps://string-db.org/network/309801.trd_1360YceI like family; Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family.
trd_1361 protein networkhttps://string-db.org/network/309801.trd_1361Hypothetical protein; Identified by glimmer; putative.
trd_1362 protein networkhttps://string-db.org/network/309801.trd_1362Hypothetical conserved protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF01638.
trd_1363 protein networkhttps://string-db.org/network/309801.trd_1363Periplasmic binding protein.
trd_1364 protein networkhttps://string-db.org/network/309801.trd_1364Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
trd_1365 protein networkhttps://string-db.org/network/309801.trd_1365Putative integral membrane protein.
trd_1366 protein networkhttps://string-db.org/network/309801.trd_1366Transcriptional regulatory protein degU; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
trd_1367 protein networkhttps://string-db.org/network/309801.trd_1367GAF domain protein; Identified by match to protein family HMM PF01590.
trd_1369 protein networkhttps://string-db.org/network/309801.trd_1369Identified by match to protein family HMM PF00753.
trd_1370 protein networkhttps://string-db.org/network/309801.trd_1370Hypothetical protein; Identified by glimmer; putative.
trd_1371 protein networkhttps://string-db.org/network/309801.trd_1371Identified by match to protein family HMM PF03734.
trd_1372 protein networkhttps://string-db.org/network/309801.trd_1372Deoxyribodipyrimidine photo-lyase; Identified by match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family.
trd_1373 protein networkhttps://string-db.org/network/309801.trd_1373Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF05223; match to protein family HMM TIGR03423.
trd_1374 protein networkhttps://string-db.org/network/309801.trd_1374Probable phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
prs-2 protein networkhttps://string-db.org/network/309801.trd_1375Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
rnc protein networkhttps://string-db.org/network/309801.trd_1376Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
trd_1377 protein networkhttps://string-db.org/network/309801.trd_1377Hypothetical protein; Identified by glimmer; putative.
trd_1378 protein networkhttps://string-db.org/network/309801.trd_1378Uncharacterized ACR; COG1993 subfamily; identified by match to protein family HMM PF02641.
crcB protein networkhttps://string-db.org/network/309801.trd_1379crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
tatA-3 protein networkhttps://string-db.org/network/309801.trd_1380Conserved domain protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide acros [...]
hemG protein networkhttps://string-db.org/network/309801.trd_1381Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
trd_1382 protein networkhttps://string-db.org/network/309801.trd_1382Exopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02811.
hemH protein networkhttps://string-db.org/network/309801.trd_1383Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
hemE protein networkhttps://string-db.org/network/309801.trd_1384Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
trd_1385 protein networkhttps://string-db.org/network/309801.trd_1385Putative methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015.
trd_1386 protein networkhttps://string-db.org/network/309801.trd_1386Putative lipoprotein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_1387 protein networkhttps://string-db.org/network/309801.trd_13872-oxo-hepta-3-ene-1,7-dioic acid hydratase; Identified by match to protein family HMM PF01689.
trd_1388 protein networkhttps://string-db.org/network/309801.trd_13884-oxalocrotonate decarboxylase; Identified by match to protein family HMM PF01689.
trd_1389 protein networkhttps://string-db.org/network/309801.trd_1389Putative tautomerase; Identified by match to protein family HMM PF01361; Belongs to the 4-oxalocrotonate tautomerase family.
trd_1390 protein networkhttps://string-db.org/network/309801.trd_1390Putative hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
trd_1391 protein networkhttps://string-db.org/network/309801.trd_1391StyB protein; Identified by match to protein family HMM PF01613.
trd_1392 protein networkhttps://string-db.org/network/309801.trd_13924-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of a [...]
trd_1393 protein networkhttps://string-db.org/network/309801.trd_1393Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic c [...]
trd_1394 protein networkhttps://string-db.org/network/309801.trd_1394Putative transcriptional regulator; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339.
trd_1395 protein networkhttps://string-db.org/network/309801.trd_13954-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Identified by match to protein family HMM PF03241.
trd_1396 protein networkhttps://string-db.org/network/309801.trd_1396Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903.
trd_1397 protein networkhttps://string-db.org/network/309801.trd_1397Putative ABC transporter substrate binding protein; Identified by match to protein family HMM PF01094.
trd_1398 protein networkhttps://string-db.org/network/309801.trd_1398ABC-transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
trd_1399 protein networkhttps://string-db.org/network/309801.trd_1399Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
trd_1400 protein networkhttps://string-db.org/network/309801.trd_1400Putative branched amino acid related transport system, bifunctional protein; Identified by match to protein family HMM PF00005.
trd_1401 protein networkhttps://string-db.org/network/309801.trd_1401Branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
trd_1402 protein networkhttps://string-db.org/network/309801.trd_1402Identified by match to protein family HMM PF04909.
trd_1403 protein networkhttps://string-db.org/network/309801.trd_1403Putative branched-chain amino acid binding protein; Identified by match to protein family HMM PF01094.
trd_1404 protein networkhttps://string-db.org/network/309801.trd_1404ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
trd_1405 protein networkhttps://string-db.org/network/309801.trd_1405ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease fa [...]
trd_1406 protein networkhttps://string-db.org/network/309801.trd_1406High-affinity branched-chain amino acid transport ATP-binding proteinlivF; Identified by match to protein family HMM PF00005.
trd_1407 protein networkhttps://string-db.org/network/309801.trd_1407Receptor family ligand binding region; Identified by match to protein family HMM PF01094.
trd_1408 protein networkhttps://string-db.org/network/309801.trd_1408Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; [...]
trd_1409 protein networkhttps://string-db.org/network/309801.trd_1409Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [...]
trd_1410 protein networkhttps://string-db.org/network/309801.trd_1410Hypothetical protein; Identified by glimmer; putative.
trd_1411 protein networkhttps://string-db.org/network/309801.trd_1411Glycosyltransferase, MGT family; Identified by match to protein family HMM TIGR01426.
trd_1412 protein networkhttps://string-db.org/network/309801.trd_1412Conserved hypothetical protein.
trd_1413 protein networkhttps://string-db.org/network/309801.trd_1413Conserved hypothetical protein.
trd_1414 protein networkhttps://string-db.org/network/309801.trd_1414Cation-transporting ATPase pacS; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003 [...]
trd_1415 protein networkhttps://string-db.org/network/309801.trd_1415Uncharacterized BCR; COG1937 family; identified by match to protein family HMM PF02583.
trd_1416 protein networkhttps://string-db.org/network/309801.trd_1416Hypothetical protein; Identified by glimmer; putative.
trd_1417 protein networkhttps://string-db.org/network/309801.trd_1417Putative poly-gamma-glutamate biosynthesis enzyme.
trd_1418 protein networkhttps://string-db.org/network/309801.trd_1418Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1419 protein networkhttps://string-db.org/network/309801.trd_1419Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1420 protein networkhttps://string-db.org/network/309801.trd_1420EAL domain protein; Identified by match to protein family HMM PF00563.
trd_1421 protein networkhttps://string-db.org/network/309801.trd_1421Glutamate-1-semialdehyde 2,1-aminomutase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotrans [...]
trd_1422 protein networkhttps://string-db.org/network/309801.trd_1422Conserved domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
trd_1423 protein networkhttps://string-db.org/network/309801.trd_1423Hypothetical protein; Identified by glimmer; putative.
rpmE protein networkhttps://string-db.org/network/309801.trd_1424Conserved domain protein; Binds the 23S rRNA.
rpmA protein networkhttps://string-db.org/network/309801.trd_1425Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
rplU protein networkhttps://string-db.org/network/309801.trd_1426Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
trd_1427 protein networkhttps://string-db.org/network/309801.trd_1427Putative membrane protein.
trd_1428 protein networkhttps://string-db.org/network/309801.trd_1428Hypothetical protein; Identified by glimmer; putative.
argF protein networkhttps://string-db.org/network/309801.trd_1429Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...]
trd_1430 protein networkhttps://string-db.org/network/309801.trd_1430Hypothetical protein; Identified by glimmer; putative.
trd_1434 protein networkhttps://string-db.org/network/309801.trd_1434Small heat shock protein; Identified by match to protein family HMM PF00011; match to protein family HMM PF04969; Belongs to the small heat shock protein (HSP20) family.
trd_1435 protein networkhttps://string-db.org/network/309801.trd_1435Rod shape-determining protein RodA; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
trd_1436 protein networkhttps://string-db.org/network/309801.trd_1436Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalentl [...]
trd_1437 protein networkhttps://string-db.org/network/309801.trd_1437Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656.
guaB protein networkhttps://string-db.org/network/309801.trd_1438Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
trd_1439 protein networkhttps://string-db.org/network/309801.trd_1439Hypothetical protein; Identified by glimmer; putative.
trd_1440 protein networkhttps://string-db.org/network/309801.trd_1440Hypothetical protein; Identified by glimmer; putative.
trd_1441 protein networkhttps://string-db.org/network/309801.trd_1441Hypothetical protein; Identified by glimmer; putative.
trd_1442 protein networkhttps://string-db.org/network/309801.trd_1442Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560.
trd_1443 protein networkhttps://string-db.org/network/309801.trd_1443Conserved hypothetical protein.
trd_1444 protein networkhttps://string-db.org/network/309801.trd_1444Hypothetical protein; Identified by glimmer; putative.
trd_1445 protein networkhttps://string-db.org/network/309801.trd_1445Putative cyclase superfamily; Identified by match to protein family HMM PF04199.
trd_1446 protein networkhttps://string-db.org/network/309801.trd_1446Hypothetical protein; Identified by glimmer; putative.
trd_1447 protein networkhttps://string-db.org/network/309801.trd_1447Hypothetical protein; Identified by glimmer; putative.
trd_1448 protein networkhttps://string-db.org/network/309801.trd_1448Putative integral membrane protein; Identified by match to protein family HMM PF07690.
trd_1449 protein networkhttps://string-db.org/network/309801.trd_1449Cation transport ATPases; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...]
trd_1450 protein networkhttps://string-db.org/network/309801.trd_1450Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
trd_1451 protein networkhttps://string-db.org/network/309801.trd_1451Magnesium transporting ATPase, P-type 1; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene mo [...]
trd_1452 protein networkhttps://string-db.org/network/309801.trd_1452Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
dnaJ protein networkhttps://string-db.org/network/309801.trd_1453Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
trd_1454 protein networkhttps://string-db.org/network/309801.trd_1454Conserved hypothetical protein.
trd_1455 protein networkhttps://string-db.org/network/309801.trd_1455Hypothetical protein; Identified by glimmer; putative.
trd_1456 protein networkhttps://string-db.org/network/309801.trd_1456Hypothetical protein; Identified by glimmer; putative.
trd_1457 protein networkhttps://string-db.org/network/309801.trd_1457Hypothetical protein; Identified by glimmer; putative.
trd_1458 protein networkhttps://string-db.org/network/309801.trd_1458Probable 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
trd_1459 protein networkhttps://string-db.org/network/309801.trd_1459Putative carboxypeptidase G2; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
trd_1460 protein networkhttps://string-db.org/network/309801.trd_1460Protein of unknown function superfamily; Identified by match to protein family HMM PF01936.
dapB-2 protein networkhttps://string-db.org/network/309801.trd_1461Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113.
trd_1462 protein networkhttps://string-db.org/network/309801.trd_1462Hypothetical protein; Identified by glimmer; putative.
trd_1463 protein networkhttps://string-db.org/network/309801.trd_1463Putative hydrolase; Identified by match to protein family HMM PF03747.
trd_1464 protein networkhttps://string-db.org/network/309801.trd_1464Hydrolase, CbbY/CbbZ/GpH/YieH family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
trd_1465 protein networkhttps://string-db.org/network/309801.trd_1465Putative membrane protein.
trd_1466 protein networkhttps://string-db.org/network/309801.trd_1466Conserved hypothetical protein.
trd_1467 protein networkhttps://string-db.org/network/309801.trd_1467Hypothetical protein; Identified by glimmer; putative.
trd_1468 protein networkhttps://string-db.org/network/309801.trd_1468Aldehyde dehydrogenase (nadp) family protein; Identified by match to protein family HMM PF00171; match to protein family HMM PF05893.
trd_1469 protein networkhttps://string-db.org/network/309801.trd_1469Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
nuoI protein networkhttps://string-db.org/network/309801.trd_1470Nadh-quinone oxidoreductase chain i; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...]
trd_1471 protein networkhttps://string-db.org/network/309801.trd_1471Formate dehydrogenase, alpha subunit homolog; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family [...]
trd_1472 protein networkhttps://string-db.org/network/309801.trd_1472Hypothetical protein; Identified by glimmer; putative.
trd_1473 protein networkhttps://string-db.org/network/309801.trd_1473Hypothetical protein; Identified by glimmer; putative.
gatB protein networkhttps://string-db.org/network/309801.trd_1474glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu [...]
trd_1476 protein networkhttps://string-db.org/network/309801.trd_1476Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
trd_1477 protein networkhttps://string-db.org/network/309801.trd_1477Hypothetical protein; Identified by glimmer; putative.
trd_1478 protein networkhttps://string-db.org/network/309801.trd_1478Potassium channel related protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
trd_1479 protein networkhttps://string-db.org/network/309801.trd_1479Trk system potassium uptake protein trkA; Identified by match to protein family HMM PF02254.
trd_1480 protein networkhttps://string-db.org/network/309801.trd_1480Identified by match to protein family HMM PF00582.
trd_1481 protein networkhttps://string-db.org/network/309801.trd_1481Identified by match to protein family HMM PF00149.
trd_1482 protein networkhttps://string-db.org/network/309801.trd_1482Hypothetical protein; Identified by glimmer; putative.
trd_1483 protein networkhttps://string-db.org/network/309801.trd_1483Hypothetical protein; Identified by glimmer; putative.
trd_1484 protein networkhttps://string-db.org/network/309801.trd_1484Transcription regulator, ArsR family; Identified by match to protein family HMM PF01022.
trd_1485 protein networkhttps://string-db.org/network/309801.trd_1485Hypothetical protein; Identified by glimmer; putative.
trd_1486 protein networkhttps://string-db.org/network/309801.trd_1486Putative integral membrane transporter; Identified by match to protein family HMM PF02683.
trd_1487 protein networkhttps://string-db.org/network/309801.trd_1487Transporter, major facilitator family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
trd_1488 protein networkhttps://string-db.org/network/309801.trd_1488Hypothetical protein; Identified by glimmer; putative.
trd_1489 protein networkhttps://string-db.org/network/309801.trd_1489Putative efflux protein; Identified by match to protein family HMM PF07690.
trd_1490 protein networkhttps://string-db.org/network/309801.trd_1490Cupin domain protein; Identified by match to protein family HMM PF07883.
trd_1491 protein networkhttps://string-db.org/network/309801.trd_1491Hypothetical protein; Identified by glimmer; putative.
trd_1492 protein networkhttps://string-db.org/network/309801.trd_1492Dihydrolipoamide S-acetyltransferase; Identified by match to protein family HMM PF00364; match to protein family HMM PF00561; match to protein family HMM PF02129; match to protein family HMM PF02 [...]
trd_1493 protein networkhttps://string-db.org/network/309801.trd_1493TPP-dependent acetoin dehydrogenase alpha-subunit; Identified by match to protein family HMM PF00676.
trd_1494 protein networkhttps://string-db.org/network/309801.trd_14942-oxoisovalerate dehydrogenase beta subunit; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780.
trd_1495 protein networkhttps://string-db.org/network/309801.trd_1495Acetoin catabolism protein X; Identified by match to protein family HMM PF01513.
trd_1496 protein networkhttps://string-db.org/network/309801.trd_1496Identified by match to protein family HMM PF02308.
trd_1497 protein networkhttps://string-db.org/network/309801.trd_1497Hypothetical protein; Identified by glimmer; putative.
trd_1498 protein networkhttps://string-db.org/network/309801.trd_1498Putative membrane protein mmpL7.
trd_1499 protein networkhttps://string-db.org/network/309801.trd_1499Putative lipoprotein.
trd_1500 protein networkhttps://string-db.org/network/309801.trd_1500Hypothetical protein; Identified by glimmer; putative.
trd_1501 protein networkhttps://string-db.org/network/309801.trd_1501RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor [...]
trd_1502 protein networkhttps://string-db.org/network/309801.trd_1502Hypothetical protein; Identified by glimmer; putative.
trd_1503 protein networkhttps://string-db.org/network/309801.trd_1503Copper transport ATP-binding protein nosF; Identified by match to protein family HMM PF00005.
trd_1504 protein networkhttps://string-db.org/network/309801.trd_1504Putative ABC-type transport system involved in multi-copper enzyme maturation, permease component.
trd_1505 protein networkhttps://string-db.org/network/309801.trd_1505Processing protease; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.
trd_1506 protein networkhttps://string-db.org/network/309801.trd_1506Putative metallo-beta-lactamase superfamily; Identified by match to protein family HMM PF00753.
trd_1507 protein networkhttps://string-db.org/network/309801.trd_1507Competence/damage-inducible protein CinA C-terminal domain; Identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
trd_1508 protein networkhttps://string-db.org/network/309801.trd_1508Putative membrane transport protein; Identified by match to protein family HMM PF07690.
trd_1509 protein networkhttps://string-db.org/network/309801.trd_1509Hypothetical protein; Identified by glimmer; putative.
trd_1510 protein networkhttps://string-db.org/network/309801.trd_1510Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1511 protein networkhttps://string-db.org/network/309801.trd_1511Putative 3-methyladenine DNA glycosylase; Identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567; Belongs to the DNA glycosylase MPG family.
valS protein networkhttps://string-db.org/network/309801.trd_1512valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
trd_1513 protein networkhttps://string-db.org/network/309801.trd_1513Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1514 protein networkhttps://string-db.org/network/309801.trd_1514Hypothetical protein; Identified by glimmer; putative.
lysJ protein networkhttps://string-db.org/network/309801.trd_1515Acetylornithine aminotransferase; Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine. Belongs to the class-III pyrido [...]
argB protein networkhttps://string-db.org/network/309801.trd_1516Acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
trd_1517 protein networkhttps://string-db.org/network/309801.trd_1517Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
argC protein networkhttps://string-db.org/network/309801.trd_1518N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrog [...]
lysX protein networkhttps://string-db.org/network/309801.trd_1519Lysine biosynthesis enzyme LysX; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF08443; [...]
lysK protein networkhttps://string-db.org/network/309801.trd_1520N-acetyl-ornithine/N-acetyl-lysine deacetylase subfamily; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine.
trd_1521 protein networkhttps://string-db.org/network/309801.trd_1521Putative lysine biosynthesis enzyme LysX; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...]
lysW protein networkhttps://string-db.org/network/309801.trd_1522Lysine biosynthesis protein LysW; Identified by match to protein family HMM TIGR01206.
trd_1523 protein networkhttps://string-db.org/network/309801.trd_1523Putative ABC transporter periplasmic binding protein A; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.
trd_1524 protein networkhttps://string-db.org/network/309801.trd_1524Dipeptide ABC transporter permease; Identified by match to protein family HMM PF00528.
trd_1525 protein networkhttps://string-db.org/network/309801.trd_1525Oligopeptide ABC transporter permease protein; Identified by match to protein family HMM PF00528.
trd_1526 protein networkhttps://string-db.org/network/309801.trd_1526Conserved hypothetical protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF08279.
trd_1527 protein networkhttps://string-db.org/network/309801.trd_1527Hypothetical protein; Identified by glimmer; putative.
cadA protein networkhttps://string-db.org/network/309801.trd_1528Cadmium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR0 [...]
trd_1529 protein networkhttps://string-db.org/network/309801.trd_1529Putative ArsR-family regulator; Identified by match to protein family HMM PF01022.
metG protein networkhttps://string-db.org/network/309801.trd_1530methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
trd_1531 protein networkhttps://string-db.org/network/309801.trd_1531Probable soluble lytic murein transglycosylase precursor; Identified by match to protein family HMM PF00515; match to protein family HMM PF01464; match to protein family HMM PF07719; match to pro [...]
trd_1532 protein networkhttps://string-db.org/network/309801.trd_1532Conserved hypothetical protein.
trd_1533 protein networkhttps://string-db.org/network/309801.trd_1533Conserved hypothetical protein.
trd_1534 protein networkhttps://string-db.org/network/309801.trd_1534Conserved hypothetical protein.
trd_1535 protein networkhttps://string-db.org/network/309801.trd_1535dolichol-P-glucose synthetase; Identified by match to protein family HMM PF00535.
trd_1536 protein networkhttps://string-db.org/network/309801.trd_1536BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.
trd_1538 protein networkhttps://string-db.org/network/309801.trd_1538Hypothetical protein; Identified by glimmer; putative.
trd_1539 protein networkhttps://string-db.org/network/309801.trd_1539Hypothetical protein; Identified by glimmer; putative.
trd_1540 protein networkhttps://string-db.org/network/309801.trd_1540Putative transcriptional regulator; Identified by match to protein family HMM PF08279.
trd_1541 protein networkhttps://string-db.org/network/309801.trd_1541N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosy [...]
trd_1542 protein networkhttps://string-db.org/network/309801.trd_1542Putative membrane protein.
trd_1543 protein networkhttps://string-db.org/network/309801.trd_1543ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
trd_1544 protein networkhttps://string-db.org/network/309801.trd_1544Bifunctional protein hldE; Identified by match to protein family HMM PF00294.
trd_1545 protein networkhttps://string-db.org/network/309801.trd_1545Hypothetical protein; Identified by glimmer; putative.
trd_1546 protein networkhttps://string-db.org/network/309801.trd_1546Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296.
trd_1547 protein networkhttps://string-db.org/network/309801.trd_1547Hdac6 protein; Identified by match to protein family HMM PF00850.
trd_1548 protein networkhttps://string-db.org/network/309801.trd_1548Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
uvrB protein networkhttps://string-db.org/network/309801.trd_1549Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...]
trd_1551 protein networkhttps://string-db.org/network/309801.trd_1551Putative two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
trd_1552 protein networkhttps://string-db.org/network/309801.trd_1552Putative two component system histidine kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730.
trd_1553 protein networkhttps://string-db.org/network/309801.trd_1553HesB/YadR/YfhF; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
trd_1554 protein networkhttps://string-db.org/network/309801.trd_1554Hypothetical protein; Identified by glimmer; putative.
trd_1556 protein networkhttps://string-db.org/network/309801.trd_1556Hypothetical protein; Identified by glimmer; putative.
glnA protein networkhttps://string-db.org/network/309801.trd_1557Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653.
glnA-2 protein networkhttps://string-db.org/network/309801.trd_1558Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653.
trd_1559 protein networkhttps://string-db.org/network/309801.trd_1559c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; mat [...]
trd_1560 protein networkhttps://string-db.org/network/309801.trd_1560Methylmalonyl Coenzyme A mutase; Identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641.
trd_1561 protein networkhttps://string-db.org/network/309801.trd_1561Hypothetical protein; Identified by glimmer; putative.
lon-2 protein networkhttps://string-db.org/network/309801.trd_1562ATP-dependent protease La; Identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match [...]
trd_1563 protein networkhttps://string-db.org/network/309801.trd_1563Peptidase, M28 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04389.
trd_1564 protein networkhttps://string-db.org/network/309801.trd_1564Lipoyltransferase; Identified by match to protein family HMM PF00293.
trd_1565 protein networkhttps://string-db.org/network/309801.trd_1565Rod shape-determining protein mreB; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02491; match to protein fa [...]
trd_1566 protein networkhttps://string-db.org/network/309801.trd_1566Hypothetical protein; Identified by glimmer; putative.
trd_1567 protein networkhttps://string-db.org/network/309801.trd_1567Cysteine desulfurase/cysteine sulfinate desulfinase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein [...]
trd_1568 protein networkhttps://string-db.org/network/309801.trd_1568Putative molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
trd_1569 protein networkhttps://string-db.org/network/309801.trd_1569Prephenate dehydrogenase; Identified by match to protein family HMM PF02153; match to protein family HMM PF02737; match to protein family HMM PF03807.
trd_1570 protein networkhttps://string-db.org/network/309801.trd_1570Hypothetical protein; Identified by glimmer; putative.
trd_1571 protein networkhttps://string-db.org/network/309801.trd_1571Hypothetical protein; Identified by glimmer; putative.
trd_1572 protein networkhttps://string-db.org/network/309801.trd_1572Aldh; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
trd_1573 protein networkhttps://string-db.org/network/309801.trd_1573Hypothetical protein; Identified by glimmer; putative.
trd_1574 protein networkhttps://string-db.org/network/309801.trd_1574Putative monooxygenase; Identified by match to protein family HMM PF00296.
trd_1575 protein networkhttps://string-db.org/network/309801.trd_1575Putative lipoprotein.
trd_1576 protein networkhttps://string-db.org/network/309801.trd_1576Putative lipoprotein.
trd_1577 protein networkhttps://string-db.org/network/309801.trd_1577Putative lipoprotein.
trd_1578 protein networkhttps://string-db.org/network/309801.trd_1578Conserved hypothetical protein.
trd_1579 protein networkhttps://string-db.org/network/309801.trd_1579Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
trd_1580 protein networkhttps://string-db.org/network/309801.trd_1580Hypothetical protein; Identified by glimmer; putative.
cad protein networkhttps://string-db.org/network/309801.trd_1581Lysine decarboxylase; Identified by match to protein family HMM PF00202; match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF01276; match to pr [...]
trd_1582 protein networkhttps://string-db.org/network/309801.trd_1582Hypothetical protein; Identified by glimmer; putative.
trd_1583 protein networkhttps://string-db.org/network/309801.trd_1583Hypothetical protein; Identified by glimmer; putative.
trd_1584 protein networkhttps://string-db.org/network/309801.trd_1584Conserved hypothetical protein.
trd_1585 protein networkhttps://string-db.org/network/309801.trd_1585Hypothetical protein; Identified by glimmer; putative.
trd_1587 protein networkhttps://string-db.org/network/309801.trd_1587Thermitase; Identified by match to protein family HMM PF00082.
trd_1589 protein networkhttps://string-db.org/network/309801.trd_1589Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1590 protein networkhttps://string-db.org/network/309801.trd_1590Uncharacterized ACR; COG1565 family; identified by match to protein family HMM PF02636.
trd_1591 protein networkhttps://string-db.org/network/309801.trd_1591O-methyltransferase.
trd_1592 protein networkhttps://string-db.org/network/309801.trd_1592Glycosyltransferase; Identified by match to protein family HMM PF00535.
trd_1593 protein networkhttps://string-db.org/network/309801.trd_1593dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Identified by match to protein family HMM PF00535.
trd_1594 protein networkhttps://string-db.org/network/309801.trd_1594Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
trd_1595 protein networkhttps://string-db.org/network/309801.trd_1595Hypothetical protein; Identified by glimmer; putative.
trd_1596 protein networkhttps://string-db.org/network/309801.trd_1596Conserved hypothetical protein.
trd_1597 protein networkhttps://string-db.org/network/309801.trd_1597Hypothetical membrane spanning protein.
trd_1598 protein networkhttps://string-db.org/network/309801.trd_1598Putative hemagglutinin/hemolysin-related protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curren [...]
trd_1599 protein networkhttps://string-db.org/network/309801.trd_1599Histidine kinase PhoR1; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to [...]
phoP protein networkhttps://string-db.org/network/309801.trd_1600Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
trd_1601 protein networkhttps://string-db.org/network/309801.trd_1601Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
trd_1602 protein networkhttps://string-db.org/network/309801.trd_1602Mannose-1-phosphate guanylyltransferase (GDP); Identified by match to protein family HMM PF00483.
topA protein networkhttps://string-db.org/network/309801.trd_1603DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
hslV protein networkhttps://string-db.org/network/309801.trd_1604Heat shock protein HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
hslU protein networkhttps://string-db.org/network/309801.trd_1605Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity.
trd_1606 protein networkhttps://string-db.org/network/309801.trd_1606Dolichyl-phosphate mannose synthase related protein; Identified by match to protein family HMM PF00535.
trd_1607 protein networkhttps://string-db.org/network/309801.trd_1607Transcriptional repressor; Identified by match to protein family HMM PF00480.
trd_1608 protein networkhttps://string-db.org/network/309801.trd_1608Hypothetical protein; Identified by glimmer; putative.
trd_1609 protein networkhttps://string-db.org/network/309801.trd_1609Putative dipeptide ABC transporter dipeptide-binding protein; Identified by match to protein family HMM PF00496.
ilvE protein networkhttps://string-db.org/network/309801.trd_1610Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
trd_1611 protein networkhttps://string-db.org/network/309801.trd_1611Glutamate-1-semialdehyde 2,1-aminomutase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
trd_1612 protein networkhttps://string-db.org/network/309801.trd_16121-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01275.
priA protein networkhttps://string-db.org/network/309801.trd_1613Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
def protein networkhttps://string-db.org/network/309801.trd_1614Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
gmk protein networkhttps://string-db.org/network/309801.trd_1615Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
trd_1616 protein networkhttps://string-db.org/network/309801.trd_1616Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.
tatC protein networkhttps://string-db.org/network/309801.trd_1617Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their sign [...]
acpP protein networkhttps://string-db.org/network/309801.trd_1618Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
nusB protein networkhttps://string-db.org/network/309801.trd_1619Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...]
accC protein networkhttps://string-db.org/network/309801.trd_1620acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein [...]
fabG protein networkhttps://string-db.org/network/309801.trd_16213-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
fabD protein networkhttps://string-db.org/network/309801.trd_1622Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128.
fabH protein networkhttps://string-db.org/network/309801.trd_16233-oxoacyl-[acyl-carrier-protein] synthase III protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes [...]
rpmF protein networkhttps://string-db.org/network/309801.trd_1624Hypothetical protein; Identified by glimmer; putative; Belongs to the bacterial ribosomal protein bL32 family.
trd_1625 protein networkhttps://string-db.org/network/309801.trd_1625Uncharacterized ACR; COG1399; identified by match to protein family HMM PF02620.
trd_1626 protein networkhttps://string-db.org/network/309801.trd_16262-dehydro-3-deoxyglucarate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
ilvE-2 protein networkhttps://string-db.org/network/309801.trd_1627Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
trd_1628 protein networkhttps://string-db.org/network/309801.trd_1628Identified by match to protein family HMM PF00496.
trd_1629 protein networkhttps://string-db.org/network/309801.trd_1629Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the AB [...]
trd_1630 protein networkhttps://string-db.org/network/309801.trd_1630Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the AB [...]
trd_1631 protein networkhttps://string-db.org/network/309801.trd_1631Metal-dependent protease; Identified by match to protein family HMM PF02163.
scpA protein networkhttps://string-db.org/network/309801.trd_1632Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA awa [...]
scpB protein networkhttps://string-db.org/network/309801.trd_1633Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA awa [...]
iscS protein networkhttps://string-db.org/network/309801.trd_1634Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental [...]
trd_1635 protein networkhttps://string-db.org/network/309801.trd_1635Transcriptional regulator superfamily; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
prfB protein networkhttps://string-db.org/network/309801.trd_1636Peptide chain release factor 2, programmed frameshift; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
trd_1637 protein networkhttps://string-db.org/network/309801.trd_1637Hypothetical protein; Identified by glimmer; putative.
hrcA protein networkhttps://string-db.org/network/309801.trd_1638Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
grpE protein networkhttps://string-db.org/network/309801.trd_1639Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...]
dnaK protein networkhttps://string-db.org/network/309801.trd_1640Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
trd_1641 protein networkhttps://string-db.org/network/309801.trd_1641Hypothetical protein; Identified by glimmer; putative.
trd_1642 protein networkhttps://string-db.org/network/309801.trd_1642Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_1643 protein networkhttps://string-db.org/network/309801.trd_1643Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_1644 protein networkhttps://string-db.org/network/309801.trd_1644Putative phage structural protein.
trd_1645 protein networkhttps://string-db.org/network/309801.trd_1645Hypothetical protein; Identified by glimmer; putative.
trd_1646 protein networkhttps://string-db.org/network/309801.trd_1646Hypothetical protein; Identified by glimmer; putative.
trd_1647 protein networkhttps://string-db.org/network/309801.trd_1647N-acetylmuramoyl-L-alanine amidase, family 2; Identified by match to protein family HMM PF01510.
trd_1648 protein networkhttps://string-db.org/network/309801.trd_1648Hypothetical protein; Identified by glimmer; putative.
trd_1654 protein networkhttps://string-db.org/network/309801.trd_1654Hypothetical protein; Identified by glimmer; putative.
trd_1655 protein networkhttps://string-db.org/network/309801.trd_1655Hypothetical protein; Identified by glimmer; putative.
trd_1656 protein networkhttps://string-db.org/network/309801.trd_1656Hypothetical protein; Identified by glimmer; putative.
trd_1657 protein networkhttps://string-db.org/network/309801.trd_1657Putative helix-turn-helix, Fis-type; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
trd_1658 protein networkhttps://string-db.org/network/309801.trd_1658Putative S-layer associated protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
trd_1659 protein networkhttps://string-db.org/network/309801.trd_1659Glycerophosphoryl diester phosphodiesterase; Identified by match to protein family HMM PF03009.
trd_1660 protein networkhttps://string-db.org/network/309801.trd_1660GAF domain protein; Identified by match to protein family HMM PF01590.
trd_1661 protein networkhttps://string-db.org/network/309801.trd_1661Membrane-associated phospholipid phosphatase; Identified by match to protein family HMM PF01569.
ispH-2 protein networkhttps://string-db.org/network/309801.trd_16624-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
trd_1663 protein networkhttps://string-db.org/network/309801.trd_1663Hydrolase, HAD superfamily; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
rfbD protein networkhttps://string-db.org/network/309801.trd_1664dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
trd_1665 protein networkhttps://string-db.org/network/309801.trd_1665Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
nfo protein networkhttps://string-db.org/network/309801.trd_1666Probable endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyr [...]
trd_1667 protein networkhttps://string-db.org/network/309801.trd_1667Putative sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
hexB protein networkhttps://string-db.org/network/309801.trd_1668DNA mismatch repair protein HexB; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
trd_1669 protein networkhttps://string-db.org/network/309801.trd_1669Transcriptional regulatory protein degU; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08279.
trd_1670 protein networkhttps://string-db.org/network/309801.trd_1670RDD family protein; Identified by match to protein family HMM PF06271.
trd_1671 protein networkhttps://string-db.org/network/309801.trd_1671Putative periplasmic dipeptide transport substrate-binding protein; Identified by match to protein family HMM PF00496.
trd_1672 protein networkhttps://string-db.org/network/309801.trd_1672Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
trd_1673 protein networkhttps://string-db.org/network/309801.trd_1673ABC transporter, membrane spanning protein (dipeptide); Identified by match to protein family HMM PF00528.
trd_1674 protein networkhttps://string-db.org/network/309801.trd_1674Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528.
trd_1675 protein networkhttps://string-db.org/network/309801.trd_1675Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528.
trd_1676 protein networkhttps://string-db.org/network/309801.trd_1676Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
trd_1677 protein networkhttps://string-db.org/network/309801.trd_1677Putative groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
trd_1678 protein networkhttps://string-db.org/network/309801.trd_1678BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.
queF protein networkhttps://string-db.org/network/309801.trd_1679GTP cyclohydrolase family protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. [...]
trd_1680 protein networkhttps://string-db.org/network/309801.trd_1680Hypothetical protein; Identified by glimmer; putative.
trd_1681 protein networkhttps://string-db.org/network/309801.trd_1681Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein; Identified by match to protein family HMM PF00391.
accB protein networkhttps://string-db.org/network/309801.trd_1682acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...]
trd_1683 protein networkhttps://string-db.org/network/309801.trd_1683Pyruvate carboxylase subunit B; Identified by match to protein family HMM PF00682.
trd_1684 protein networkhttps://string-db.org/network/309801.trd_1684Sugar phosphatase of the HAD superfamily; Identified by match to protein family HMM PF00702.
trd_1685 protein networkhttps://string-db.org/network/309801.trd_1685Putative phenylacetate-CoA ligase.
trd_1687 protein networkhttps://string-db.org/network/309801.trd_1687Lipase; Identified by match to protein family HMM PF07859.
trd_1688 protein networkhttps://string-db.org/network/309801.trd_1688Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily; Identified by match to protein family HMM PF02900.
trd_1689 protein networkhttps://string-db.org/network/309801.trd_1689Conserved hypothetical protein.
leuA protein networkhttps://string-db.org/network/309801.trd_16902-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...]
leuC protein networkhttps://string-db.org/network/309801.trd_16913-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
leuD protein networkhttps://string-db.org/network/309801.trd_16923-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
leuB protein networkhttps://string-db.org/network/309801.trd_16933-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
trd_1694 protein networkhttps://string-db.org/network/309801.trd_1694Hypothetical protein; Identified by glimmer; putative.
trd_1695 protein networkhttps://string-db.org/network/309801.trd_1695Spore peptidoglycan hydrolase; Identified by match to protein family HMM PF00704.
aroQ protein networkhttps://string-db.org/network/309801.trd_16963-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
trd_1697 protein networkhttps://string-db.org/network/309801.trd_1697PepQ; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321; Belongs to the peptidase M24B family.
efp protein networkhttps://string-db.org/network/309801.trd_1698Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...]
accB-2 protein networkhttps://string-db.org/network/309801.trd_1699acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...]
xseA protein networkhttps://string-db.org/network/309801.trd_1700Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
xseB protein networkhttps://string-db.org/network/309801.trd_1701Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
trd_1702 protein networkhttps://string-db.org/network/309801.trd_1702Hypothetical protein; Identified by glimmer; putative.
trd_1703 protein networkhttps://string-db.org/network/309801.trd_1703Serine proteinase; Identified by match to protein family HMM PF00082; match to protein family HMM PF05922; Belongs to the peptidase S8 family.
trd_1704 protein networkhttps://string-db.org/network/309801.trd_1704Conserved hypothetical protein.
trd_1705 protein networkhttps://string-db.org/network/309801.trd_1705Hypothetical transcriptional regulator; Identified by match to protein family HMM PF01047.
trd_1707 protein networkhttps://string-db.org/network/309801.trd_1707Hypothetical protein; Identified by glimmer; putative.
trd_1708 protein networkhttps://string-db.org/network/309801.trd_1708Molybdenum cofactor biosynthesis protein D/E; Identified by match to protein family HMM PF02391; match to protein family HMM PF02597; match to protein family HMM TIGR01682; match to protein famil [...]
trd_1709 protein networkhttps://string-db.org/network/309801.trd_1709Putative molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
trd_1710 protein networkhttps://string-db.org/network/309801.trd_1710Hypothetical protein; Identified by glimmer; putative.
trd_1711 protein networkhttps://string-db.org/network/309801.trd_1711GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to chan [...]
obg protein networkhttps://string-db.org/network/309801.trd_1712Putative GTPase of unknown function subfamily; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydr [...]
sigA-2 protein networkhttps://string-db.org/network/309801.trd_1713RNA polymerase sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is [...]
lysA protein networkhttps://string-db.org/network/309801.trd_1714Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
trd_1715 protein networkhttps://string-db.org/network/309801.trd_1715ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
coaE protein networkhttps://string-db.org/network/309801.trd_1716dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
trd_1717 protein networkhttps://string-db.org/network/309801.trd_1717Glutamine amidotransferase, class II/dipeptidase; Identified by match to protein family HMM PF01244.
trd_1718 protein networkhttps://string-db.org/network/309801.trd_1718Srebp protease/cbs domain; Identified by match to protein family HMM PF00571; match to protein family HMM PF02163; Belongs to the peptidase M50B family.
trd_1719 protein networkhttps://string-db.org/network/309801.trd_1719Hypothetical protein; Identified by glimmer; putative.
trd_1720 protein networkhttps://string-db.org/network/309801.trd_1720Hypothetical protein; Identified by glimmer; putative.
trd_1721 protein networkhttps://string-db.org/network/309801.trd_1721Hypothetical protein; Identified by glimmer; putative.
dtd protein networkhttps://string-db.org/network/309801.trd_1722D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
ispF protein networkhttps://string-db.org/network/309801.trd_17232C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
ispD protein networkhttps://string-db.org/network/309801.trd_17242-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
trd_1725 protein networkhttps://string-db.org/network/309801.trd_1725Nucleotide binding protein, PINc; Identified by match to protein family HMM PF01850; match to protein family HMM PF01938.
trd_1726 protein networkhttps://string-db.org/network/309801.trd_1726Putative PHP domain; Identified by match to protein family HMM PF02811.
trd_1727 protein networkhttps://string-db.org/network/309801.trd_1727spoVS-related protein.
pyk protein networkhttps://string-db.org/network/309801.trd_1728Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
trd_1729 protein networkhttps://string-db.org/network/309801.trd_1729Alchohol dehydrogenase; Similar to chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution; an automated process has ident [...]
trd_1730 protein networkhttps://string-db.org/network/309801.trd_1730Zinc-dependent alcohol dehydrogenase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
trd_1732 protein networkhttps://string-db.org/network/309801.trd_1732Similar to A. fulgidus predicted coding region; identified by match to protein family HMM PF04008.
pdhA protein networkhttps://string-db.org/network/309801.trd_1733TPP-dependent acetoin dehydrogenase alpha-subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
trd_1734 protein networkhttps://string-db.org/network/309801.trd_1734Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
aceF protein networkhttps://string-db.org/network/309801.trd_1735Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family H [...]
trd_1736 protein networkhttps://string-db.org/network/309801.trd_1736Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
trd_1737 protein networkhttps://string-db.org/network/309801.trd_1737Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1738 protein networkhttps://string-db.org/network/309801.trd_1738Hypothetical protein; Identified by glimmer; putative.
trd_1739 protein networkhttps://string-db.org/network/309801.trd_1739Conserved hypothetical protein.
uvrA protein networkhttps://string-db.org/network/309801.trd_1740Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
trd_1741 protein networkhttps://string-db.org/network/309801.trd_1741Putative endonuclease; Identified by match to protein family HMM PF01844.
serS protein networkhttps://string-db.org/network/309801.trd_1742seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
trd_1743 protein networkhttps://string-db.org/network/309801.trd_1743Hypothetical protein; Identified by glimmer; putative.
trd_1744 protein networkhttps://string-db.org/network/309801.trd_1744Prokaryotic protein of unknown function (DUF849); Identified by match to protein family HMM PF05853.
trd_1745 protein networkhttps://string-db.org/network/309801.trd_1745MlrC C-terminus family; Identified by match to protein family HMM PF07171; match to protein family HMM PF07364.
smc protein networkhttps://string-db.org/network/309801.trd_1746Putative chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
galE protein networkhttps://string-db.org/network/309801.trd_1747UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to [...]
ppa protein networkhttps://string-db.org/network/309801.trd_1748Inorganic pyrophosphatase; Identified by match to protein family HMM PF00719.
trd_1749 protein networkhttps://string-db.org/network/309801.trd_1749Thiosulfate sulfurtransferase; Identified by match to protein family HMM PF00581.
trd_1750 protein networkhttps://string-db.org/network/309801.trd_1750Putative periplasmic immunogenic protein; Identified by match to protein family HMM PF04402.
trd_1751 protein networkhttps://string-db.org/network/309801.trd_1751Hypothetical protein; Identified by glimmer; putative.
trd_1752 protein networkhttps://string-db.org/network/309801.trd_1752RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; [...]
trd_1753 protein networkhttps://string-db.org/network/309801.trd_1753Hypothetical protein; Identified by glimmer; putative.
trd_1754 protein networkhttps://string-db.org/network/309801.trd_1754Putative two-component system response regulator; Identified by match to protein family HMM PF00196.
trd_1755 protein networkhttps://string-db.org/network/309801.trd_1755Septum formation initiator family; Identified by match to protein family HMM PF04977.
gatA protein networkhttps://string-db.org/network/309801.trd_1756glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-t [...]
gatC protein networkhttps://string-db.org/network/309801.trd_1757glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
trd_1758 protein networkhttps://string-db.org/network/309801.trd_1758Identified by match to protein family HMM PF00232.
dnaX protein networkhttps://string-db.org/network/309801.trd_1759DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' [...]
rsmI protein networkhttps://string-db.org/network/309801.trd_1760Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
trd_1761 protein networkhttps://string-db.org/network/309801.trd_1761L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
fad protein networkhttps://string-db.org/network/309801.trd_1762enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
trd_1763 protein networkhttps://string-db.org/network/309801.trd_1763Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1764 protein networkhttps://string-db.org/network/309801.trd_1764Hypothetical protein; Identified by glimmer; putative.
trd_1765 protein networkhttps://string-db.org/network/309801.trd_1765Hypothetical protein; Identified by glimmer; putative.
trd_1766 protein networkhttps://string-db.org/network/309801.trd_1766Hypothetical protein; Identified by glimmer; putative.
trd_1767 protein networkhttps://string-db.org/network/309801.trd_1767Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
trd_1768 protein networkhttps://string-db.org/network/309801.trd_1768Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588.
trd_1769 protein networkhttps://string-db.org/network/309801.trd_1769Hypothetical protein; Identified by glimmer; putative.
ndk protein networkhttps://string-db.org/network/309801.trd_1770Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...]
trd_1771 protein networkhttps://string-db.org/network/309801.trd_1771Tetratricopeptide repeat family.
trd_1773 protein networkhttps://string-db.org/network/309801.trd_1773Sarcosine oxidase; Identified by match to protein family HMM PF01266.
trd_1774 protein networkhttps://string-db.org/network/309801.trd_1774Hypothetical protein; Identified by glimmer; putative.
trd_1775 protein networkhttps://string-db.org/network/309801.trd_1775Hypothetical protein; Identified by glimmer; putative.
trd_1776 protein networkhttps://string-db.org/network/309801.trd_1776Metal-transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01 [...]
trd_1777 protein networkhttps://string-db.org/network/309801.trd_1777Phosphoglycerate dehydrogenase SerA; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM PF034 [...]
trd_1778 protein networkhttps://string-db.org/network/309801.trd_1778Putative mannosyl transferase; Identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149.
trd_1779 protein networkhttps://string-db.org/network/309801.trd_1779Hypothetical protein; Identified by glimmer; putative.
nuoA protein networkhttps://string-db.org/network/309801.trd_1780Nadh ubiquinone oxidoreductase chain a; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the e [...]
nuoB protein networkhttps://string-db.org/network/309801.trd_1781Nadh dehydrogenase i, b subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoC protein networkhttps://string-db.org/network/309801.trd_1782Nadh-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...]
nuoD protein networkhttps://string-db.org/network/309801.trd_1783NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoH protein networkhttps://string-db.org/network/309801.trd_1784Nadh-quinone oxidoreductase chain h; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...]
trd_1785 protein networkhttps://string-db.org/network/309801.trd_1785Nadh dehydrogenase i chain j; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...]
nuoK protein networkhttps://string-db.org/network/309801.trd_1786Nadh dehydrogenase subunit 4l; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in [...]
trd_1787 protein networkhttps://string-db.org/network/309801.trd_1787Nadh dehydrogenase i chain 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
trd_1788 protein networkhttps://string-db.org/network/309801.trd_1788Nadh-quinone oxidoreductase chain m; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.
nuoN protein networkhttps://string-db.org/network/309801.trd_1789Nadh dehydrogenase chain n; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in thi [...]
trd_1790 protein networkhttps://string-db.org/network/309801.trd_1790Putative acetyltransferase; Identified by match to protein family HMM PF00583.
trd_1791 protein networkhttps://string-db.org/network/309801.trd_1791Conserved hypothetical protein.
trd_1792 protein networkhttps://string-db.org/network/309801.trd_1792Identified by match to protein family HMM PF00155.
trd_1793 protein networkhttps://string-db.org/network/309801.trd_1793alanyl-tRNA synthetase; Identified by match to protein family HMM PF07973.
trd_1794 protein networkhttps://string-db.org/network/309801.trd_1794Putative Phosphoribosyl transferase domain; Identified by match to protein family HMM PF00156.
rnj protein networkhttps://string-db.org/network/309801.trd_1795Metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or dec [...]
trd_1796 protein networkhttps://string-db.org/network/309801.trd_1796Putative cytochrome oxidase assembly protein.
trd_1797 protein networkhttps://string-db.org/network/309801.trd_1797Hypothetical protein; Identified by glimmer; putative.
queC protein networkhttps://string-db.org/network/309801.trd_1798exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
ychF protein networkhttps://string-db.org/network/309801.trd_1799GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
trd_1800 protein networkhttps://string-db.org/network/309801.trd_1800Hypothetical protein; Identified by glimmer; putative.
trd_1801 protein networkhttps://string-db.org/network/309801.trd_1801Putative membrane protein.
trd_1802 protein networkhttps://string-db.org/network/309801.trd_1802Class II Aldolase and Adducin N-terminal domain protein; Identified by match to protein family HMM PF00596.
sucD protein networkhttps://string-db.org/network/309801.trd_1803succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repre [...]
sucC protein networkhttps://string-db.org/network/309801.trd_1804succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repre [...]
trd_1805 protein networkhttps://string-db.org/network/309801.trd_1805Hypothetical protein; Identified by glimmer; putative.
trd_1806 protein networkhttps://string-db.org/network/309801.trd_18063-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
trd_1807 protein networkhttps://string-db.org/network/309801.trd_1807TPP-dependent acetoin dehydrogenase alpha-subunit; Identified by match to protein family HMM PF00676.
trd_1808 protein networkhttps://string-db.org/network/309801.trd_1808Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780.
trd_1809 protein networkhttps://string-db.org/network/309801.trd_1809Universal stress protein; Identified by match to protein family HMM PF00582.
trd_1810 protein networkhttps://string-db.org/network/309801.trd_1810Putative oxidoreductase protein; Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family.
trd_1811 protein networkhttps://string-db.org/network/309801.trd_1811Hypothetical protein; Identified by glimmer; putative.
trd_1812 protein networkhttps://string-db.org/network/309801.trd_1812Hypothetical protein; Identified by glimmer; putative.
trd_1813 protein networkhttps://string-db.org/network/309801.trd_1813Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; mat [...]
trd_1814 protein networkhttps://string-db.org/network/309801.trd_1814Hypothetical protein; Identified by glimmer; putative.
trd_1815 protein networkhttps://string-db.org/network/309801.trd_1815B12-dependent ribonucleoside diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA re [...]
trd_1816 protein networkhttps://string-db.org/network/309801.trd_1816Response regulator uvrY; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.
trd_1817 protein networkhttps://string-db.org/network/309801.trd_1817Probable transmembrane two component system sensor kinase transcription regulator protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein [...]
ffh protein networkhttps://string-db.org/network/309801.trd_1818Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
ftsY protein networkhttps://string-db.org/network/309801.trd_1819Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
trd_1820 protein networkhttps://string-db.org/network/309801.trd_1820DNA repair protein radC homolog; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.
trd_1821 protein networkhttps://string-db.org/network/309801.trd_1821Hypothetical protein; Identified by glimmer; putative.
trd_1822 protein networkhttps://string-db.org/network/309801.trd_1822N-acetylmuramoyl-L-alanine amidase domain protein; Identified by match to protein family HMM PF01510.
trd_1823 protein networkhttps://string-db.org/network/309801.trd_1823Putative membrane protein.
trd_1824 protein networkhttps://string-db.org/network/309801.trd_1824Glycosyl hydrolase, family 15; Identified by match to protein family HMM PF00723.
trd_1825 protein networkhttps://string-db.org/network/309801.trd_1825Aldehyde dehydrogenase aldh; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
trd_1826 protein networkhttps://string-db.org/network/309801.trd_1826YCII-related domain superfamily; Identified by match to protein family HMM PF03795.
phoU protein networkhttps://string-db.org/network/309801.trd_1827Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
pstB protein networkhttps://string-db.org/network/309801.trd_1828Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the A [...]
pstB-2 protein networkhttps://string-db.org/network/309801.trd_1829Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the A [...]
pstA protein networkhttps://string-db.org/network/309801.trd_1830Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
pstC protein networkhttps://string-db.org/network/309801.trd_1831Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the memb [...]
pstS protein networkhttps://string-db.org/network/309801.trd_1832Phosphate ABC transporter, periplasmic phosphate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409; match to protein family HMM TIGR02136.
trd_1833 protein networkhttps://string-db.org/network/309801.trd_1833Phosphate regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
trd_1834 protein networkhttps://string-db.org/network/309801.trd_1834Hypothetical protein; Identified by glimmer; putative.
trd_1835 protein networkhttps://string-db.org/network/309801.trd_1835Hypothetical protein; Identified by glimmer; putative.
trd_1836 protein networkhttps://string-db.org/network/309801.trd_1836N-acetyltransferase, gnat family; Identified by match to protein family HMM PF00583.
trd_1837 protein networkhttps://string-db.org/network/309801.trd_1837Protein of unknown function superfamily; Identified by match to protein family HMM PF01904.
trd_1838 protein networkhttps://string-db.org/network/309801.trd_1838Type I phosphodiesterase / nucleotide pyrophosphatase superfamily; Identified by match to protein family HMM PF01663.
trd_1839 protein networkhttps://string-db.org/network/309801.trd_1839Oligopeptide ABC transpoter oligopeptide-binding protein; Identified by match to protein family HMM PF00496.
trd_1840 protein networkhttps://string-db.org/network/309801.trd_1840Dipeptide transport system permease protein dppC; Identified by match to protein family HMM PF00528.
trd_1841 protein networkhttps://string-db.org/network/309801.trd_1841Putative transport system permease protein; Identified by match to protein family HMM PF00528.
trd_1842 protein networkhttps://string-db.org/network/309801.trd_1842Aut protein; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125.
mviN-2 protein networkhttps://string-db.org/network/309801.trd_1843Integral membrane protein MviN; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695.
trd_1845 protein networkhttps://string-db.org/network/309801.trd_1845Cytosine deaminase; Identified by match to protein family HMM PF07969.
trd_1846 protein networkhttps://string-db.org/network/309801.trd_1846Protein of unknown function (DUF820) family; Identified by match to protein family HMM PF05685.
trd_1847 protein networkhttps://string-db.org/network/309801.trd_1847Carbon monoxide dehydrogenase large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
trd_1848 protein networkhttps://string-db.org/network/309801.trd_1848Carbon monoxide dehydrogenase large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
trd_1849 protein networkhttps://string-db.org/network/309801.trd_1849Glycosyl transferase, family 2:Glycosyl transferase, group 1; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.
trd_1850 protein networkhttps://string-db.org/network/309801.trd_1850Identified by match to protein family HMM PF00903.
trd_1851 protein networkhttps://string-db.org/network/309801.trd_1851Putative peptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343.
trd_1852 protein networkhttps://string-db.org/network/309801.trd_1852Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
trd_1853 protein networkhttps://string-db.org/network/309801.trd_1853Putative hydantoinase; Identified by match to protein family HMM PF06032.
trd_1854 protein networkhttps://string-db.org/network/309801.trd_1854Putative YGGT family; Identified by match to protein family HMM PF02325.
trd_1855 protein networkhttps://string-db.org/network/309801.trd_1855Hydantoinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF05378.
trd_1856 protein networkhttps://string-db.org/network/309801.trd_1856Putative membrane protein.
trd_1857 protein networkhttps://string-db.org/network/309801.trd_1857Bacterial protein of unknown function (DUF951); Identified by match to protein family HMM PF06107.
trd_1858 protein networkhttps://string-db.org/network/309801.trd_1858Hypothetical protein; Identified by glimmer; putative.
trd_1859 protein networkhttps://string-db.org/network/309801.trd_1859Transporter, major facilitator family; Identified by match to protein family HMM PF07690.
trd_1860 protein networkhttps://string-db.org/network/309801.trd_1860Inner membrane ABC transporter permease protein yddQ; Identified by match to protein family HMM PF00528.
trd_1861 protein networkhttps://string-db.org/network/309801.trd_1861Dipeptide transport system permease protein dppB; Identified by match to protein family HMM PF00528.
trd_1862 protein networkhttps://string-db.org/network/309801.trd_1862Putative dipeptide ABC transporter; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.
hypF protein networkhttps://string-db.org/network/309801.trd_1863[NiFe] hydrogenase maturation protein HypF; Identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HM [...]
trd_1864 protein networkhttps://string-db.org/network/309801.trd_1864Glutaredoxin 3; Identified by match to protein family HMM PF00462.
trd_1865 protein networkhttps://string-db.org/network/309801.trd_1865Phosphoheptose isomerase.
hypE protein networkhttps://string-db.org/network/309801.trd_1866Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124.
hypD protein networkhttps://string-db.org/network/309801.trd_1867Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075.
trd_1868 protein networkhttps://string-db.org/network/309801.trd_1868Hydrogenase maturation factor.
hypC protein networkhttps://string-db.org/network/309801.trd_1869Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.
hypB protein networkhttps://string-db.org/network/309801.trd_1870Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.
hypA protein networkhttps://string-db.org/network/309801.trd_1871Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
trd_1872 protein networkhttps://string-db.org/network/309801.trd_1872Hypothetical protein; Identified by glimmer; putative.
trd_1873 protein networkhttps://string-db.org/network/309801.trd_1873F420-nonreducing hydrogenase; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.
trd_1874 protein networkhttps://string-db.org/network/309801.trd_1874Conserved hypothetical protein.
trd_1875 protein networkhttps://string-db.org/network/309801.trd_1875Conserved hypothetical protein.
trd_1876 protein networkhttps://string-db.org/network/309801.trd_1876Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...]
trd_1877 protein networkhttps://string-db.org/network/309801.trd_1877Nickel-dependent hydrogenase, large subunit; Identified by match to protein family HMM PF00374.
trd_1878 protein networkhttps://string-db.org/network/309801.trd_1878Nickel-dependent hydrogenase, small subunit; Identified by match to protein family HMM PF01058.
rny protein networkhttps://string-db.org/network/309801.trd_1879Metal-dependent phosphohydrolase, HD region; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
trd_1880 protein networkhttps://string-db.org/network/309801.trd_1880Conserved hypothetical protein.
trd_1881 protein networkhttps://string-db.org/network/309801.trd_1881FHA domain protein; Identified by match to protein family HMM PF00498.
trd_1882 protein networkhttps://string-db.org/network/309801.trd_1882Hypothetical protein; Identified by glimmer; putative.
trd_1883 protein networkhttps://string-db.org/network/309801.trd_1883Putative multidrug-efflux transporter; Identified by match to protein family HMM PF07690.
trd_1884 protein networkhttps://string-db.org/network/309801.trd_1884L-allo-threonine aldolase; Identified by match to protein family HMM PF01212.
trd_1885 protein networkhttps://string-db.org/network/309801.trd_1885Identified by match to protein family HMM PF05163.
trd_1887 protein networkhttps://string-db.org/network/309801.trd_1887Hypothetical protein; Identified by glimmer; putative.
trd_1888 protein networkhttps://string-db.org/network/309801.trd_1888Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
gltX protein networkhttps://string-db.org/network/309801.trd_1890glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
trd_1891 protein networkhttps://string-db.org/network/309801.trd_1891Hypothetical protein; Identified by glimmer; putative.
trd_1892 protein networkhttps://string-db.org/network/309801.trd_1892Putative glycosyltransferase; Identified by match to protein family HMM PF00534.
trd_1893 protein networkhttps://string-db.org/network/309801.trd_1893Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296.
thrC-2 protein networkhttps://string-db.org/network/309801.trd_1894Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260.
mutM protein networkhttps://string-db.org/network/309801.trd_1895formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...]
trd_1896 protein networkhttps://string-db.org/network/309801.trd_1896Hit family protein; Identified by match to protein family HMM PF01230.
trd_1897 protein networkhttps://string-db.org/network/309801.trd_1897BNR/Asp-box repeat domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02012.
trd_1898 protein networkhttps://string-db.org/network/309801.trd_1898Hypothetical protein; Identified by glimmer; putative.
trd_1899 protein networkhttps://string-db.org/network/309801.trd_1899Hypothetical protein; Identified by glimmer; putative.
trd_1900 protein networkhttps://string-db.org/network/309801.trd_1900Conserved hypothetical protein.
trd_1901 protein networkhttps://string-db.org/network/309801.trd_1901Hypothetical protein; Identified by glimmer; putative.
trd_1902 protein networkhttps://string-db.org/network/309801.trd_1902Conserved hypothetical protein; Similar to chain A, Crystal Structure Of The Conserved Protein Tt1542 From Thermus Thermophilus Hb8; identified by match to protein family HMM PF02585.
trd_1903 protein networkhttps://string-db.org/network/309801.trd_1903Hypothetical protein; Identified by glimmer; putative.
trd_1904 protein networkhttps://string-db.org/network/309801.trd_1904Identified by match to protein family HMM PF02416.
trd_1905 protein networkhttps://string-db.org/network/309801.trd_1905Trypsin domain protein; Identified by match to protein family HMM PF00089.
trd_1906 protein networkhttps://string-db.org/network/309801.trd_1906Putative oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
trd_1907 protein networkhttps://string-db.org/network/309801.trd_1907Developmental regulator MorA; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; mat [...]
trd_1908 protein networkhttps://string-db.org/network/309801.trd_1908Putative membrane protein.
cysS-2 protein networkhttps://string-db.org/network/309801.trd_1909cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA syn [...]
trd_1910 protein networkhttps://string-db.org/network/309801.trd_1910Peroxiredoxin, bacterioferritin comigratory protein homolog; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or [...]
trd_1911 protein networkhttps://string-db.org/network/309801.trd_1911Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
trd_1912 protein networkhttps://string-db.org/network/309801.trd_1912Bacterioferritin comigratory protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
trd_1913 protein networkhttps://string-db.org/network/309801.trd_1913Hypothetical protein.
trd_1914 protein networkhttps://string-db.org/network/309801.trd_1914Putative oxidoreductase.
trd_1915 protein networkhttps://string-db.org/network/309801.trd_1915Identified by match to protein family HMM PF00903.
trd_1916 protein networkhttps://string-db.org/network/309801.trd_1916Hypothetical protein; Identified by glimmer; putative.
trd_1917 protein networkhttps://string-db.org/network/309801.trd_1917Putative haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family [...]
trd_1918 protein networkhttps://string-db.org/network/309801.trd_1918Putative fumarylacetoacetate hydrolase family protein; Identified by match to protein family HMM PF01557.
trd_1919 protein networkhttps://string-db.org/network/309801.trd_1919Hypothetical protein; Identified by glimmer; putative.
trd_1920 protein networkhttps://string-db.org/network/309801.trd_1920Conserved hypothetical protein.
trd_1921 protein networkhttps://string-db.org/network/309801.trd_1921Hypothetical protein; Identified by glimmer; putative.
trd_1922 protein networkhttps://string-db.org/network/309801.trd_1922Putative cadherin domain/calx-beta domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curre [...]
trd_1923 protein networkhttps://string-db.org/network/309801.trd_1923methylmalonyl-CoA epimerase; Similar to mitochondrial precursor; identified by match to protein family HMM PF00903.
trd_1924 protein networkhttps://string-db.org/network/309801.trd_1924Cell division inhibitor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at [...]
minD protein networkhttps://string-db.org/network/309801.trd_1925Septum site-determining protein MinD; Identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968.
minC protein networkhttps://string-db.org/network/309801.trd_1926Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments tha [...]
trd_1927 protein networkhttps://string-db.org/network/309801.trd_1927Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423.
trd_1928 protein networkhttps://string-db.org/network/309801.trd_1928Hypothetical protein; Identified by glimmer; putative.
trd_1929 protein networkhttps://string-db.org/network/309801.trd_1929Probable phosphoesterase; Identified by match to protein family HMM PF00149.
glgE protein networkhttps://string-db.org/network/309801.trd_1930Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved [...]
trd_1931 protein networkhttps://string-db.org/network/309801.trd_1931Alpha amylase, catalytic subdomain; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457.
treY protein networkhttps://string-db.org/network/309801.trd_1932Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase; Identified by match to protein family HMM PF02446.
glgB protein networkhttps://string-db.org/network/309801.trd_19331,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains [...]
trd_1934 protein networkhttps://string-db.org/network/309801.trd_1934Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.
trd_1935 protein networkhttps://string-db.org/network/309801.trd_1935Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065.
trd_1936 protein networkhttps://string-db.org/network/309801.trd_1936Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.
trd_1937 protein networkhttps://string-db.org/network/309801.trd_1937Rod shape-determining protein; Involved in formation and maintenance of cell shape.
trd_1938 protein networkhttps://string-db.org/network/309801.trd_1938Rod shape-determining protein mreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.
trd_1939 protein networkhttps://string-db.org/network/309801.trd_1939Lipoprotein precursor; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
trd_1940 protein networkhttps://string-db.org/network/309801.trd_1940Conserved hypothetical protein TIGR00147; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.
trd_1941 protein networkhttps://string-db.org/network/309801.trd_1941Hypothetical protein; Similar to BH1952.
trd_1942 protein networkhttps://string-db.org/network/309801.trd_1942Probable alcohol dehydrogenase; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
trd_1943 protein networkhttps://string-db.org/network/309801.trd_1943N-acyl-D-aspartate deacylase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969.
trd_1944 protein networkhttps://string-db.org/network/309801.trd_1944Domain of unknown function protein; Identified by match to protein family HMM PF03737.
trd_1945 protein networkhttps://string-db.org/network/309801.trd_1945Mandelate racemase / muconate lactonizing enzyme, N-terminal domain protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
trd_1946 protein networkhttps://string-db.org/network/309801.trd_1946Senescence marker protein-30 (SMP-30); Identified by match to protein family HMM PF08450.
trd_1947 protein networkhttps://string-db.org/network/309801.trd_1947Hypothetical protein; Identified by glimmer; putative.
trd_1948 protein networkhttps://string-db.org/network/309801.trd_1948Putative oxidoreductase protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; [...]
trd_1950 protein networkhttps://string-db.org/network/309801.trd_1950Maltose ABC transporter, permease; Identified by match to protein family HMM PF00528.
trd_1951 protein networkhttps://string-db.org/network/309801.trd_1951Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
trd_1952 protein networkhttps://string-db.org/network/309801.trd_1952Bacterial extracellular solute-binding proteins, family 5; Identified by match to protein family HMM PF00496.
trd_1954 protein networkhttps://string-db.org/network/309801.trd_1954Putative oligopeptide transport atp-binding abc transporter protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; [...]
trd_1955 protein networkhttps://string-db.org/network/309801.trd_1955Oligopeptide transport ATP-binding protein appF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC [...]
trd_1956 protein networkhttps://string-db.org/network/309801.trd_19562-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
trd_1957 protein networkhttps://string-db.org/network/309801.trd_1957Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
dgoA protein networkhttps://string-db.org/network/309801.trd_1958Probable galactonate dehydratase protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme fam [...]
trd_1959 protein networkhttps://string-db.org/network/309801.trd_1959Putative lipoprotein.
trd_1960 protein networkhttps://string-db.org/network/309801.trd_1960Identified by match to protein family HMM PF03734.
trd_1961 protein networkhttps://string-db.org/network/309801.trd_1961Putative peptidase; Identified by match to protein family HMM PF01476.
trd_1962 protein networkhttps://string-db.org/network/309801.trd_1962Hypothetical protein; Identified by glimmer; putative.
trd_1963 protein networkhttps://string-db.org/network/309801.trd_1963ComE operon protein 3; Identified by match to protein family HMM PF00753.
pgsA protein networkhttps://string-db.org/network/309801.trd_1964CDP-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase (pgsA); Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
trd_1965 protein networkhttps://string-db.org/network/309801.trd_1965Glycosyl transferase; Identified by match to protein family HMM PF00534.
trd_1966 protein networkhttps://string-db.org/network/309801.trd_1966Hypothetical protein; Identified by glimmer; putative.
trd_1967 protein networkhttps://string-db.org/network/309801.trd_1967PRC-barrel domain protein; Identified by match to protein family HMM PF05239.
trd_1968 protein networkhttps://string-db.org/network/309801.trd_1968Putative penicillin-binding protein 1A; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
trd_1969 protein networkhttps://string-db.org/network/309801.trd_1969Hypothetical protein; Identified by glimmer; putative.
trd_1970 protein networkhttps://string-db.org/network/309801.trd_1970Hypothetical protein; Identified by glimmer; putative.
trd_1971 protein networkhttps://string-db.org/network/309801.trd_1971Putative amino acid oxidase; Identified by match to protein family HMM PF01266.
trd_1972 protein networkhttps://string-db.org/network/309801.trd_1972Polysulphide reductase, NrfD superfamily; Identified by match to protein family HMM PF03916.
trd_1973 protein networkhttps://string-db.org/network/309801.trd_1973Putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit; Identified by match to protein family HMM PF00037.
trd_1974 protein networkhttps://string-db.org/network/309801.trd_1974Formate dehydrogenase, nitrate-inducible, major subunit (selenocysteine-containing); An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 [...]
trd_1975 protein networkhttps://string-db.org/network/309801.trd_1975Hypothetical protein; Identified by glimmer; putative.
trd_1976 protein networkhttps://string-db.org/network/309801.trd_1976UspA; Identified by match to protein family HMM PF00582.
kefB protein networkhttps://string-db.org/network/309801.trd_1977Kef-type K+ transport systems, membrane components; Identified by match to protein family HMM PF00999.
trd_1978 protein networkhttps://string-db.org/network/309801.trd_1978Putative HEPN domain; Identified by match to protein family HMM PF05168.
trd_1979 protein networkhttps://string-db.org/network/309801.trd_1979Putative Nucleotidyltransferase domain; Identified by match to protein family HMM PF01909.
trd_1980 protein networkhttps://string-db.org/network/309801.trd_1980Putative endonuclease/exonuclease/phosphatase family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended o [...]
trd_1981 protein networkhttps://string-db.org/network/309801.trd_1981Hypothetical protein; Identified by glimmer; putative.
trd_1982 protein networkhttps://string-db.org/network/309801.trd_1982Mechanosensitive ion channel; Identified by match to protein family HMM PF00924.