Organism Overview: Riesia pthiripubis


 
rplS protein networkhttps://string-db.org/network/428412.AOE58_00050Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
AOE58_00065 protein networkhttps://string-db.org/network/428412.AOE58_00065tRNA (guanine-N1)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
gshA protein networkhttps://string-db.org/network/428412.AOE58_00070Glutamate--cysteine ligase; Involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glut [...]
csrA protein networkhttps://string-db.org/network/428412.AOE58_00085Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid g [...]
ARC54589.1 protein networkhttps://string-db.org/network/428412.AOE58_00090Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
AOE58_00100 protein networkhttps://string-db.org/network/428412.AOE58_00100alanine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
recA protein networkhttps://string-db.org/network/428412.AOE58_00115Catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; Derived by automated computati [...]
AOE58_00165 protein networkhttps://string-db.org/network/428412.AOE58_00165tRNA-Thr; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL25 family.
leuS protein networkhttps://string-db.org/network/428412.AOE58_00230Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
thrS protein networkhttps://string-db.org/network/428412.AOE58_00250Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.
rplT protein networkhttps://string-db.org/network/428412.AOE58_0025550S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
lysS protein networkhttps://string-db.org/network/428412.AOE58_00415Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
sufC protein networkhttps://string-db.org/network/428412.AOE58_00505ATP-dependent DNA helicase RecG; Catalyzes branch migration in Holliday junction intermediates; Derived by automated computational analysis using gene prediction method: Protein Homology.
rpmH protein networkhttps://string-db.org/network/428412.AOE58_00550Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
AOE58_00625 protein networkhttps://string-db.org/network/428412.AOE58_00625Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
ARC54598.1 protein networkhttps://string-db.org/network/428412.AOE58_00630Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
AOE58_00640 protein networkhttps://string-db.org/network/428412.AOE58_00640Hypothetical protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
nusB protein networkhttps://string-db.org/network/428412.AOE58_00645Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal [...]
mnmA protein networkhttps://string-db.org/network/428412.AOE58_00710Hypothetical protein; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) sub [...]
lolA protein networkhttps://string-db.org/network/428412.AOE58_00720Thioredoxin reductase; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal [...]
rpsA protein networkhttps://string-db.org/network/428412.AOE58_00755Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
AOE58_00770 protein networkhttps://string-db.org/network/428412.AOE58_00770MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
rnhA protein networkhttps://string-db.org/network/428412.AOE58_00805Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
dnaQ protein networkhttps://string-db.org/network/428412.AOE58_00810DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing funct [...]
ARC54606.1 protein networkhttps://string-db.org/network/428412.AOE58_00820Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
pgk protein networkhttps://string-db.org/network/428412.AOE58_00825Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.
ARC54608.1 protein networkhttps://string-db.org/network/428412.AOE58_00830Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphat [...]
ARC54609.1 protein networkhttps://string-db.org/network/428412.AOE58_00850glutamine--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adeny [...]
AOE58_00890 protein networkhttps://string-db.org/network/428412.AOE58_00890tRNA-Trp; Derived by automated computational analysis using gene prediction method: Protein Homology.
rho protein networkhttps://string-db.org/network/428412.AOE58_00895Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
dapF protein networkhttps://string-db.org/network/428412.AOE58_00910Hypothetical protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the ba [...]
priB protein networkhttps://string-db.org/network/428412.AOE58_00960Hypothetical protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
nusA protein networkhttps://string-db.org/network/428412.AOE58_01015Hypothetical protein; Participates in both transcription termination and antitermination.
ARC54613.1 protein networkhttps://string-db.org/network/428412.AOE58_01030Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
glmM protein networkhttps://string-db.org/network/428412.AOE58_01035Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
ribA protein networkhttps://string-db.org/network/428412.AOE58_01090Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
adk protein networkhttps://string-db.org/network/428412.AOE58_01165Hypothetical protein; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
ruvC protein networkhttps://string-db.org/network/428412.AOE58_01180Hypothetical protein; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polar [...]
groES protein networkhttps://string-db.org/network/428412.AOE58_01185Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groEL protein networkhttps://string-db.org/network/428412.AOE58_01190Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
hisS protein networkhttps://string-db.org/network/428412.AOE58_01325Hypothetical protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
AOE58_01355 protein networkhttps://string-db.org/network/428412.AOE58_01355Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
dnaE protein networkhttps://string-db.org/network/428412.AOE58_01395DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LpxB family.
tbpA protein networkhttps://string-db.org/network/428412.AOE58_01535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
hslU protein networkhttps://string-db.org/network/428412.AOE58_01600ATP-dependent protease ATP-binding subunit HslU; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
fabG protein networkhttps://string-db.org/network/428412.AOE58_01660Acyl carrier protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
nusG protein networkhttps://string-db.org/network/428412.AOE58_0172050S ribosomal protein L11; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase ( [...]
secE protein networkhttps://string-db.org/network/428412.AOE58_01725Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the Se [...]
ARC54630.1 protein networkhttps://string-db.org/network/428412.AOE58_01730Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
trkA protein networkhttps://string-db.org/network/428412.AOE58_01810Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using ge [...]
rpsD protein networkhttps://string-db.org/network/428412.AOE58_01820DNA-directed RNA polymerase subunit alpha; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/428412.AOE58_0182530S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpmD protein networkhttps://string-db.org/network/428412.AOE58_01850Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rplR protein networkhttps://string-db.org/network/428412.AOE58_0186030S ribosomal protein S5; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberan [...]
ARC54635.1 protein networkhttps://string-db.org/network/428412.AOE58_01865Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...]
rpsH protein networkhttps://string-db.org/network/428412.AOE58_0187030S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rplX protein networkhttps://string-db.org/network/428412.AOE58_0189550S ribosomal protein L14; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/428412.AOE58_0191530S ribosomal protein S3; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall [...]
rpsS protein networkhttps://string-db.org/network/428412.AOE58_0192030S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplW protein networkhttps://string-db.org/network/428412.AOE58_0193050S ribosomal protein L2; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docki [...]
rpsJ protein networkhttps://string-db.org/network/428412.AOE58_01945Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
fusA protein networkhttps://string-db.org/network/428412.AOE58_0196530S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
AOE58_01975 protein networkhttps://string-db.org/network/428412.AOE58_01975Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ARC54661.1 protein networkhttps://string-db.org/network/428412.AOE58_01985Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
ARC54643.1 protein networkhttps://string-db.org/network/428412.AOE58_01995Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
prfA protein networkhttps://string-db.org/network/428412.AOE58_02040Replicative DNA helicase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomeriz [...]
ARC54645.1 protein networkhttps://string-db.org/network/428412.AOE58_02045Sulfur relay protein TusE; Part of a sulfur-relay system.
murD protein networkhttps://string-db.org/network/428412.AOE58_02080UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanin [...]
aroK protein networkhttps://string-db.org/network/428412.AOE58_02295tryptophan--tRNA ligase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
dnaK protein networkhttps://string-db.org/network/428412.AOE58_02405Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
rpsU protein networkhttps://string-db.org/network/428412.AOE58_02500Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS21 family.
AOE58_02530 protein networkhttps://string-db.org/network/428412.AOE58_02530Hypothetical protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA [...]
ARC54652.1 protein networkhttps://string-db.org/network/428412.AOE58_02535Hypothetical protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA [...]