Organism Overview: Thermovirga lienii


 
dnaA protein networkhttps://string-db.org/network/580340.Tlie_0001Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
Tlie_0002 protein networkhttps://string-db.org/network/580340.Tlie_0002DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
recF protein networkhttps://string-db.org/network/580340.Tlie_0003DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...]
mnmG protein networkhttps://string-db.org/network/580340.Tlie_0004Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
Tlie_0005 protein networkhttps://string-db.org/network/580340.Tlie_0005PFAM: Protein of unknown function (DUF721); InterPro IPR007922; KEGG: aco:Amico_0005 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized p [...]
Tlie_0006 protein networkhttps://string-db.org/network/580340.Tlie_0006KEGG: aco:Amico_0007 hypothetical protein; SPTR: Putative cell division protein FtsL.
Tlie_0008 protein networkhttps://string-db.org/network/580340.Tlie_0008PFAM: C4-dicarboxylate anaerobic carrier; COGs: COG1288 membrane protein; InterPro IPR010916: IPR018385; KEGG: nth:Nther_1853 C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic [...]
Tlie_0009 protein networkhttps://string-db.org/network/580340.Tlie_0009Transposase mutator type; Required for the transposition of the insertion element.
Tlie_0010 protein networkhttps://string-db.org/network/580340.Tlie_0010D-aminoacylase domain protein; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680: IPR012855; KEGG: nth:Nth [...]
Tlie_0011 protein networkhttps://string-db.org/network/580340.Tlie_0011Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168 [...]
Tlie_0012 protein networkhttps://string-db.org/network/580340.Tlie_0012PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_0013 protein networkhttps://string-db.org/network/580340.Tlie_0013GntR domain protein; PFAM: Ribonuclease R winged-helix domain; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR013668: IPR011711; KEGG: aco:Amico_1772 GntR domain protein; PFAM: [...]
Tlie_0014 protein networkhttps://string-db.org/network/580340.Tlie_0014Transporter, NhaC family (TC 2.A.35); PFAM: Na+/H+ antiporter family; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: amt:Amet_0694 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC [...]
Tlie_0015 protein networkhttps://string-db.org/network/580340.Tlie_0015PFAM: TrkA-N domain; Ion channel; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099: IPR003148: IPR006037; KEGG: tai:Taci_0064 TrkA-N domain protein; PFA [...]
Tlie_0016 protein networkhttps://string-db.org/network/580340.Tlie_0016Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR000097: [...]
Tlie_0017 protein networkhttps://string-db.org/network/580340.Tlie_0017Hypothetical protein; PFAM: Predicted permease; KEGG: hor:Hore_14720 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0018 protein networkhttps://string-db.org/network/580340.Tlie_0018Hypothetical protein; PFAM: Predicted permease; KEGG: hor:Hore_14710 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0019 protein networkhttps://string-db.org/network/580340.Tlie_0019PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; putative selenium metabolism hydrolase; COGs: CO [...]
Tlie_0020 protein networkhttps://string-db.org/network/580340.Tlie_0020PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; COGs: COG1794 Aspartate racemase; InterPro IPR004380: IPR018187: IPR015942; KEGG: gbm:Gbem_1222 aspartate racemase; PFAM: Asp/Glu/hy [...]
Tlie_0021 protein networkhttps://string-db.org/network/580340.Tlie_0021Hypothetical protein; KEGG: drm:Dred_2208 vitamin B12 dependent methionine synthase, activation region; SPTR: Vitamin B12 dependent methionine synthase, activation region.
Tlie_0022 protein networkhttps://string-db.org/network/580340.Tlie_0022PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: kko:Kkor_1137 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenas [...]
Tlie_0023 protein networkhttps://string-db.org/network/580340.Tlie_0023PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: tai:Taci_1669 transcriptional regulator, GntR family; [...]
Tlie_0024 protein networkhttps://string-db.org/network/580340.Tlie_0024Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; COGs: COG3894 Uncharacterized metal-binding protein; InterPro IPR001041; KEGG: tjr:TherJR_2614 ferredoxin; PFAM: ferredoxin; SPTR: Iro [...]
Tlie_0025 protein networkhttps://string-db.org/network/580340.Tlie_0025PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; [...]
Tlie_0026 protein networkhttps://string-db.org/network/580340.Tlie_0026PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681: IPR0 [...]
Tlie_0027 protein networkhttps://string-db.org/network/580340.Tlie_0027PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: aco:Amic [...]
ilvD protein networkhttps://string-db.org/network/580340.Tlie_0028PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404: IPR010916: IPR020558: IPR000581; KEGG: tjr [...]
Tlie_0029 protein networkhttps://string-db.org/network/580340.Tlie_0029PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: amt [...]
Tlie_0030 protein networkhttps://string-db.org/network/580340.Tlie_0030PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: amt:Amet_3 [...]
Tlie_0031 protein networkhttps://string-db.org/network/580340.Tlie_0031TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP fam [...]
Tlie_0032 protein networkhttps://string-db.org/network/580340.Tlie_0032GntR domain protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: pth:PTH_2232 transcriptional regu [...]
Tlie_0033 protein networkhttps://string-db.org/network/580340.Tlie_0033Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: tai:Taci_0088 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: Transg [...]
Tlie_0034 protein networkhttps://string-db.org/network/580340.Tlie_0034Membrane protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter co [...]
Tlie_0035 protein networkhttps://string-db.org/network/580340.Tlie_0035Multi-sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; COGs: COG5002 Signa [...]
Tlie_0036 protein networkhttps://string-db.org/network/580340.Tlie_0036Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consistin [...]
Tlie_0037 protein networkhttps://string-db.org/network/580340.Tlie_0037Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
pstB protein networkhttps://string-db.org/network/580340.Tlie_0038Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belo [...]
Tlie_0039 protein networkhttps://string-db.org/network/580340.Tlie_0039PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; COGs: COG0581 ABC-type phosphate transport system permease co [...]
Tlie_0040 protein networkhttps://string-db.org/network/580340.Tlie_0040Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across [...]
Tlie_0041 protein networkhttps://string-db.org/network/580340.Tlie_0041Phosphate ABC transporter substrate-binding protein, PhoT family; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein; COGs: COG0226 ABC-type phosphate transp [...]
Tlie_0042 protein networkhttps://string-db.org/network/580340.Tlie_0042Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902: IPR001120; KEGG: tai:Taci_1051 hypothetica [...]
Tlie_0043 protein networkhttps://string-db.org/network/580340.Tlie_0043Hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902: IPR001120; KEGG: tai:Taci_1050 hypothetical protein; SPTR: Putative pilin domain protein.
Tlie_0044 protein networkhttps://string-db.org/network/580340.Tlie_0044KEGG: tai:Taci_1049 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0045 protein networkhttps://string-db.org/network/580340.Tlie_0045Pyrrolo-quinoline quinone repeat-containing protein; PFAM: PQQ enzyme repeat; TIGRFAM: conserved repeat domain; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR [...]
Tlie_0046 protein networkhttps://string-db.org/network/580340.Tlie_0046KEGG: ptm:GSPATT00020220001 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0047 protein networkhttps://string-db.org/network/580340.Tlie_0047Ferroxidase; Iron-storage protein.
Tlie_0048 protein networkhttps://string-db.org/network/580340.Tlie_0048PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain; COGs: COG2033 [...]
Tlie_0049 protein networkhttps://string-db.org/network/580340.Tlie_0049Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR001052: IPR018527: IPR004039; KEGG: tme:Tmel_1197 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type [...]
Tlie_0050 protein networkhttps://string-db.org/network/580340.Tlie_0050Hypothetical protein; PFAM: YeeE/YedE family (DUF395); KEGG: aco:Amico_0149 hypothetical protein; SPTR: Putative membrane protein.
Tlie_0051 protein networkhttps://string-db.org/network/580340.Tlie_0051PFAM: SirA-like protein; InterPro IPR001455; KEGG: aco:Amico_0150 SirA family protein; PFAM: SirA-like domain-containing protein; SPTR: Hypothetical cytosolic protein; Belongs to the sulfur carri [...]
Tlie_0052 protein networkhttps://string-db.org/network/580340.Tlie_0052Selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; COGs: COG0709 Selenophosphate sy [...]
Tlie_0053 protein networkhttps://string-db.org/network/580340.Tlie_0053Twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR0 [...]
Tlie_0054 protein networkhttps://string-db.org/network/580340.Tlie_0054MgtC/SapB transporter; PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: hch:HCH_00686 uncharacterized membrane protein; PFAM: MgtC/SapB transporter; SPTR: Uncharacteri [...]
Tlie_0055 protein networkhttps://string-db.org/network/580340.Tlie_0055Diguanylate cyclase with PAS/PAC and GAF sensors; PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterProIPR003018: IPR000 [...]
Tlie_0056 protein networkhttps://string-db.org/network/580340.Tlie_0056Protein of unknown function UPF0182; PFAM: Uncharacterised protein family (UPF0182); COGs: COG1615 conserved hypothetical protein; InterPro IPR005372; KEGG: aco:Amico_0115 protein of unknown func [...]
Tlie_0057 protein networkhttps://string-db.org/network/580340.Tlie_0057PFAM: SNARE associated Golgi protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: aco:Amico_1637 SNARE associated Golgi protein-related protein; PFAM: SNARE associated Go [...]
Tlie_0058 protein networkhttps://string-db.org/network/580340.Tlie_0058PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: pyri [...]
Tlie_0059 protein networkhttps://string-db.org/network/580340.Tlie_0059PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; COGs: COG1760 L-serine deaminase; InterPro IPR004642: IPR005130; KEGG: aco:Amico_0078 L- [...]
Tlie_0060 protein networkhttps://string-db.org/network/580340.Tlie_0060PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR004643: IPR005131: IPR002912; KE [...]
Tlie_0061 protein networkhttps://string-db.org/network/580340.Tlie_0061Putative PAS/PAC sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014: IPR001610: IPR013656: IPR000700; KEGG: mpd:MCP_1856 putative his [...]
Tlie_0062 protein networkhttps://string-db.org/network/580340.Tlie_0062Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR000983: IPR012902: IPR001120; KEGG: tai:Taci_1052 [...]
Tlie_0063 protein networkhttps://string-db.org/network/580340.Tlie_0063Protein of unknown function DUF195; PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: dap:Dacet_1804 hypothetical protein; PFAM: protein of unknown functi [...]
Tlie_0064 protein networkhttps://string-db.org/network/580340.Tlie_0064Putative PAS/PAC sensor protein; PFAM: HD domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG; COGs: COG3437 Respon [...]
Tlie_0065 protein networkhttps://string-db.org/network/580340.Tlie_0065KEGG: ava:Ava_4088 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0066 protein networkhttps://string-db.org/network/580340.Tlie_0066PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR010917: IPR012910: IPR000531; KEGG: aco:Amico_0333 TonB-de [...]
Tlie_0067 protein networkhttps://string-db.org/network/580340.Tlie_0067PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR0066 [...]
Tlie_0068 protein networkhttps://string-db.org/network/580340.Tlie_0068PFAM: Flagellar hook capping protein; COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: hor:Hore_16820 flagellar hook capping protein; PFAM: flagellar hook capping protein; [...]
Tlie_0069 protein networkhttps://string-db.org/network/580340.Tlie_0069PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; COGs: COG1749 Flagellar hook protein Fl [...]
Tlie_0070 protein networkhttps://string-db.org/network/580340.Tlie_0070Flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; COGs: COG134 [...]
flhB protein networkhttps://string-db.org/network/580340.Tlie_0071Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of [...]
Tlie_0072 protein networkhttps://string-db.org/network/580340.Tlie_0072RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
fliE protein networkhttps://string-db.org/network/580340.Tlie_0073PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; InterPro IPR001624; KEGG: tnp:Tnap_1437 flagellar hook-basal body complex subunit Fl [...]
Tlie_0074 protein networkhttps://string-db.org/network/580340.Tlie_0074Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
Tlie_0075 protein networkhttps://string-db.org/network/580340.Tlie_0075PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090: IPR006668; KEGG: tai:Taci_1336 flagellar motor switch [...]
Tlie_0076 protein networkhttps://string-db.org/network/580340.Tlie_0076PFAM: Flagellar assembly protein FliH; COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR018035; KEGG: tai:Taci_1335 flagellar assembly protein FliH; PFAM: Flag [...]
Tlie_0077 protein networkhttps://string-db.org/network/580340.Tlie_0077Type III secretion system ATPase, FliI/YscN; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; COGs: COG1157 [...]
Tlie_0078 protein networkhttps://string-db.org/network/580340.Tlie_0078PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; InterPro IPR012823; KEGG: ehi:EHI_093850 Viral A-type inclusion protein repeat; SPTR: Viral A-type inclusion protein repeat, [...]
Tlie_0079 protein networkhttps://string-db.org/network/580340.Tlie_0079PFAM: Transglycosylase SLT domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR000189: IPR008258; KEGG: pth [...]
Tlie_0080 protein networkhttps://string-db.org/network/580340.Tlie_0080PFAM: Protein of unknown function (DUF342); COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: tai:Taci_1305 protein of [...]
flhA protein networkhttps://string-db.org/network/580340.Tlie_0081Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs [...]
Tlie_0082 protein networkhttps://string-db.org/network/580340.Tlie_0082OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: tai:Taci_1325 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: Flagell [...]
Tlie_0083 protein networkhttps://string-db.org/network/580340.Tlie_0083KEGG: tai:Taci_0287 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0084 protein networkhttps://string-db.org/network/580340.Tlie_0084CheA signal transduction histidine kinase; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kina [...]
Tlie_0085 protein networkhttps://string-db.org/network/580340.Tlie_0085Hypothetical protein; InterPro IPR013026; KEGG: tai:Taci_0944 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0086 protein networkhttps://string-db.org/network/580340.Tlie_0086PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG1291 Flagellar motor component; InterPro IPR000540: IPR002898; KEGG: tai:Taci_1326 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton [...]
Tlie_0087 protein networkhttps://string-db.org/network/580340.Tlie_0087Hypothetical protein; InterPro IPR019897; KEGG: aha:AHA_3590 aspartate racemase; SPTR: Valine--tRNA ligase.
Tlie_0088 protein networkhttps://string-db.org/network/580340.Tlie_0088KEGG: gwc:GWCH70_1116 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0089 protein networkhttps://string-db.org/network/580340.Tlie_0089Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
Tlie_0090 protein networkhttps://string-db.org/network/580340.Tlie_0090Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; COGs: COG1558 Flagellar basal b [...]
Tlie_0091 protein networkhttps://string-db.org/network/580340.Tlie_0091Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; [...]
Tlie_0092 protein networkhttps://string-db.org/network/580340.Tlie_0092Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; COGs: COG1886 Flagellar motor switch/type III secretory pathway p [...]
Tlie_0093 protein networkhttps://string-db.org/network/580340.Tlie_0093MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; Inter [...]
Tlie_0094 protein networkhttps://string-db.org/network/580340.Tlie_0094PFAM: SRP54-type protein, GTPase domain; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR003593: IPR000897; KEGG: tai:Taci_1314 GTP-binding signal recognition particle SRP54 G-domain pro [...]
Tlie_0095 protein networkhttps://string-db.org/network/580340.Tlie_0095NifH/FrxC:cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: tai:Taci_1313 NifH/FrxC:cobyrin [...]
Tlie_0096 protein networkhttps://string-db.org/network/580340.Tlie_0096Hypothetical protein; KEGG: dan:Dana_GF14415 GF14415 gene product from transcript GF14415-RA; SPTR: GF14415.
Tlie_0097 protein networkhttps://string-db.org/network/580340.Tlie_0097PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: gtn:GTNG_1085 two-compo [...]
Tlie_0098 protein networkhttps://string-db.org/network/580340.Tlie_0098Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG2206 HD-GYP domain; InterPro IPR003607: IPR006674; KEGG: bpf:BpOF4_05010 hypothetical protein; PFAM: metal-dependent phosphohydrolase H [...]
Tlie_0099 protein networkhttps://string-db.org/network/580340.Tlie_0099CheC domain protein; PFAM: CheC-like family; InterPro IPR007597; KEGG: tai:Taci_0308 hypothetical protein; PFAM: CheC domain protein; SPTR: Putative uncharacterized protein.
fliP protein networkhttps://string-db.org/network/580340.Tlie_0100Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
Tlie_0101 protein networkhttps://string-db.org/network/580340.Tlie_0101PFAM: Bacterial export proteins, family 3; COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191; KEGG: tai:Taci_1318 export protein FliQ family 3; PFAM: export protein [...]
Tlie_0102 protein networkhttps://string-db.org/network/580340.Tlie_0102Type III secretion system inner membrane R protein; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; COGs: COG1684 Flagellar biosynthesis pathway component [...]
Tlie_0103 protein networkhttps://string-db.org/network/580340.Tlie_0103KEGG: tai:Taci_0689 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0104 protein networkhttps://string-db.org/network/580340.Tlie_0104Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
Tlie_0105 protein networkhttps://string-db.org/network/580340.Tlie_0105PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: [...]
Tlie_0106 protein networkhttps://string-db.org/network/580340.Tlie_0106Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemo [...]
Tlie_0107 protein networkhttps://string-db.org/network/580340.Tlie_0107Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the [...]
Tlie_0108 protein networkhttps://string-db.org/network/580340.Tlie_0108PFAM: Flagellar hook-length control protein FliK; InterPro IPR021136; KEGG: vvy:VV2476 flagellar hook-length control protein FliK; PFAM: Flagellar hook-length control protein-like, C-terminal dom [...]
Tlie_0109 protein networkhttps://string-db.org/network/580340.Tlie_0109PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: tai:Taci_0827 flagellar protein FliS; PFAM: [...]
Tlie_0110 protein networkhttps://string-db.org/network/580340.Tlie_0110Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; COGs: COG1256 Flagellar hook-associated protein; InterPro IPR0 [...]
Tlie_0111 protein networkhttps://string-db.org/network/580340.Tlie_0111Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-rin [...]
Tlie_0112 protein networkhttps://string-db.org/network/580340.Tlie_0112Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
flgI protein networkhttps://string-db.org/network/580340.Tlie_0113Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
Tlie_0114 protein networkhttps://string-db.org/network/580340.Tlie_0114KEGG: tai:Taci_1143 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0115 protein networkhttps://string-db.org/network/580340.Tlie_0115PFAM: FlgN protein; KEGG: tai:Taci_0664 hypothetical protein; SPTR: Putative uncharacterized protein.
cheD protein networkhttps://string-db.org/network/580340.Tlie_0116CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
Tlie_0117 protein networkhttps://string-db.org/network/580340.Tlie_0117CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: tai:Taci_1309 CheC, inhibitor of MCP meth [...]
cheB protein networkhttps://string-db.org/network/580340.Tlie_0118Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Cataly [...]
Tlie_0119 protein networkhttps://string-db.org/network/580340.Tlie_0119Hypothetical protein; KEGG: pjd:Pjdr2_3455 flagellar assembly protein FliH; SPTR: Flagellar assembly protein FliH.
Tlie_0120 protein networkhttps://string-db.org/network/580340.Tlie_0120Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemo [...]
Tlie_0121 protein networkhttps://string-db.org/network/580340.Tlie_0121Hypothetical protein; KEGG: mcl:MCCL_1719 truncated sucrose-6-phosphate hydrolase; SPTR: Truncated sucrose-6-phosphate hydrolase.
Tlie_0122 protein networkhttps://string-db.org/network/580340.Tlie_0122Putative RNA polymerase, sigma 70 family subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
Tlie_0123 protein networkhttps://string-db.org/network/580340.Tlie_0123PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: glo:Glov_2888 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Ch [...]
Tlie_0124 protein networkhttps://string-db.org/network/580340.Tlie_0124Hypothetical protein; KEGG: bts:Btus_1747 type I restriction-modification system, M subunit; SPTR: Putative uncharacterized protein.
Tlie_0125 protein networkhttps://string-db.org/network/580340.Tlie_0125KEGG: sul:SYO3AOP1_0850 hypothetical protein; SPTR: Heavy metal-associated domain protein.
Tlie_0126 protein networkhttps://string-db.org/network/580340.Tlie_0126Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: nhl:Nhal_0242 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix do [...]
Tlie_0128 protein networkhttps://string-db.org/network/580340.Tlie_0128Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0482 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_0129 protein networkhttps://string-db.org/network/580340.Tlie_0129Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
Tlie_0130 protein networkhttps://string-db.org/network/580340.Tlie_0130Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
csrA protein networkhttps://string-db.org/network/580340.Tlie_0131Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequ [...]
fliW protein networkhttps://string-db.org/network/580340.Tlie_0132Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and par [...]
Tlie_0133 protein networkhttps://string-db.org/network/580340.Tlie_0133KEGG: tai:Taci_1247 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0134 protein networkhttps://string-db.org/network/580340.Tlie_0134PFAM: Protein of unknown function (DUF327); InterPro IPR005585; KEGG: tai:Taci_1019 protein of unknown function DUF327; PFAM: protein of unknown function DUF327; SPTR: Putative uncharacterized pr [...]
Tlie_0135 protein networkhttps://string-db.org/network/580340.Tlie_0135Flagellar basal-body rod protein FlgG; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein Fl [...]
Tlie_0136 protein networkhttps://string-db.org/network/580340.Tlie_0136PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: tai:Taci_1572 response regulator receiver modulated CheW protein; PFAM: CheW domain protein [...]
Tlie_0137 protein networkhttps://string-db.org/network/580340.Tlie_0137Acetolactate synthase, large subunit; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal [...]
Tlie_0138 protein networkhttps://string-db.org/network/580340.Tlie_0138PFAM: Isocitrate/isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818: IPR001804; KEGG: aco:Amico_0098 3-isopropylmalate dehydrogenase; PFAM: [...]
leuD protein networkhttps://string-db.org/network/580340.Tlie_01393-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
leuC protein networkhttps://string-db.org/network/580340.Tlie_01403-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
leuA protein networkhttps://string-db.org/network/580340.Tlie_01412-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...]
ilvC protein networkhttps://string-db.org/network/580340.Tlie_0142Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...]
Tlie_0143 protein networkhttps://string-db.org/network/580340.Tlie_0143PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789: IPR002 [...]
Tlie_0144 protein networkhttps://string-db.org/network/580340.Tlie_0144PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581; KEGG: nth:Nther_1850 dihydroxy-acid dehydr [...]
kynU protein networkhttps://string-db.org/network/580340.Tlie_0145Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
Tlie_0146 protein networkhttps://string-db.org/network/580340.Tlie_0146PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR017578: IPR001345: IPR013078; KEGG: slp:Slip_1453 phosphoglycerat [...]
cobS protein networkhttps://string-db.org/network/580340.Tlie_0147Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobina [...]
Tlie_0148 protein networkhttps://string-db.org/network/580340.Tlie_0148PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: dae:Dtox_30 [...]
cobT protein networkhttps://string-db.org/network/580340.Tlie_0149Nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole ( [...]
Tlie_0150 protein networkhttps://string-db.org/network/580340.Tlie_0150KEGG: npu:Npun_R3960 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0151 protein networkhttps://string-db.org/network/580340.Tlie_0151PFAM: Predicted ATPase of the ABC class; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: hor:Hore_11360 predicted ATPase of the ABC class; PFAM: ABC transporter, ATPase, predicte [...]
Tlie_0152 protein networkhttps://string-db.org/network/580340.Tlie_0152ABC-3 protein; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: mar:MAE_52810 ABC-3 transport family protein; PFAM: [...]
Tlie_0153 protein networkhttps://string-db.org/network/580340.Tlie_0153PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: syp:SYNPCC7002_A2500 ABC transporter; PFAM: ABC transporter related; S [...]
Tlie_0154 protein networkhttps://string-db.org/network/580340.Tlie_0154PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: cyh:Cyan8802_3938 periplasmic s [...]
Tlie_0155 protein networkhttps://string-db.org/network/580340.Tlie_0155PFAM: Asp/Glu/Hydantoin racemase; KEGG: rfr:Rfer_0241 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0156 protein networkhttps://string-db.org/network/580340.Tlie_0156Transporter, NhaC family (TC 2.A.35); PFAM: Na+/H+ antiporter family; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: pfu:PF2032 hypothetical protein; PFAM: Na+/H+ antiporter NhaC-like [...]
Tlie_0157 protein networkhttps://string-db.org/network/580340.Tlie_0157PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: dat:HRM2_15290 saccharopine dehydrogenase-like protein (NADP+, L-glutamat [...]
Tlie_0158 protein networkhttps://string-db.org/network/580340.Tlie_0158PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: dat:HRM2_15280 transcriptional regulator (GntR family [...]
Tlie_0159 protein networkhttps://string-db.org/network/580340.Tlie_0159Hypothetical protein; KEGG: pmx:PERMA_0140 RIP metalloprotease RseP; SPTR: RIP metalloprotease RseP.
Tlie_0160 protein networkhttps://string-db.org/network/580340.Tlie_0160PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR002328: IPR013154: IPR013149; [...]
cobD protein networkhttps://string-db.org/network/580340.Tlie_0161Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
Tlie_0162 protein networkhttps://string-db.org/network/580340.Tlie_0162PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and co [...]
Tlie_0163 protein networkhttps://string-db.org/network/580340.Tlie_0163PFAM: GHMP kinases N terminal domain; COGs: COG4542 Protein involved in propanediol utilization and related protein (includes coumermycin biosynthetic protein) possible kinase; InterPro IPR006204 [...]
cobQ protein networkhttps://string-db.org/network/580340.Tlie_0164Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed fo [...]
Tlie_0165 protein networkhttps://string-db.org/network/580340.Tlie_0165Methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemo [...]
Tlie_0167 protein networkhttps://string-db.org/network/580340.Tlie_0167O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235: IPR000277; KEG [...]
metXA protein networkhttps://string-db.org/network/580340.Tlie_0168Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
Tlie_0169 protein networkhttps://string-db.org/network/580340.Tlie_0169Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: aco:Amico_0343 beta-lactamase domain protein; SPTR: Metal [...]
Tlie_0170 protein networkhttps://string-db.org/network/580340.Tlie_0170PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: apo:Arcpr_1 [...]
Tlie_0171 protein networkhttps://string-db.org/network/580340.Tlie_0171Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: tjr:TherJR_0845 protein of unknown function DUF81; PFAM: protein of unknown [...]
thiE protein networkhttps://string-db.org/network/580340.Tlie_0172Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine [...]
Tlie_0173 protein networkhttps://string-db.org/network/580340.Tlie_0173PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399: IPR013749; KEGG: aco:Amico [...]
Tlie_0174 protein networkhttps://string-db.org/network/580340.Tlie_0174Hypothetical protein; KEGG: kol:Kole_1926 hydrolase of HD superfamily-like protein; SPTR: Transcriptional regulator, GntR family.
Tlie_0175 protein networkhttps://string-db.org/network/580340.Tlie_0175PFAM: Transposase IS116/IS110/IS902 family; InterPro IPR003346; KEGG: ots:OTBS_0082 transposase and inactivated derivative; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative tran [...]
Tlie_0176 protein networkhttps://string-db.org/network/580340.Tlie_0176PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: tai:Taci_0167 glycosyl transferase family 2; PFAM: glyc [...]
Tlie_0177 protein networkhttps://string-db.org/network/580340.Tlie_0177PFAM: GGDEF domain; KEGG: tai:Taci_0166 response regulator receiver protein; SPTR: Response regulator receiver protein.
Tlie_0178 protein networkhttps://string-db.org/network/580340.Tlie_0178COGs: COG1566 Multidrug resistance efflux pump; KEGG: tai:Taci_0165 multidrug resistance efflux pump-like protein; SPTR: Putative uncharacterized protein.
Tlie_0179 protein networkhttps://string-db.org/network/580340.Tlie_0179PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: tai:Taci_0164 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0180 protein networkhttps://string-db.org/network/580340.Tlie_0180TIGRFAM: iron-sulfur cluster binding protein, putative; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR017896; KEGG: mru:mru_1711 4Fe-4S binding domain-containing protein; SPT [...]
Tlie_0181 protein networkhttps://string-db.org/network/580340.Tlie_0181Diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000014: IPR00016 [...]
Tlie_0182 protein networkhttps://string-db.org/network/580340.Tlie_0182PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: rer:RER_49240 GntR family transcriptional regulator; P [...]
Tlie_0183 protein networkhttps://string-db.org/network/580340.Tlie_0183CoA-binding domain protein; PFAM: CoA binding domain; Formyl transferase; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR002376: IPR003781; KEGG: mpd:MCP_2918 acetyl-CoA synthetase; [...]
Tlie_0184 protein networkhttps://string-db.org/network/580340.Tlie_0184Pyruvate carboxyltransferase; PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034: IPR000891; KEGG: aco:Amico_1308 pyruvate carboxyltransferase; PF [...]
Tlie_0185 protein networkhttps://string-db.org/network/580340.Tlie_0185PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR004839; KEGG: cth:Cthe_0363 aminotransferase; PFAM: aminotransferase clas [...]
Tlie_0186 protein networkhttps://string-db.org/network/580340.Tlie_0186PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: aoe:Clos_2599 sodium:neurotransmitter symporter; PFAM: sodium: [...]
panD protein networkhttps://string-db.org/network/580340.Tlie_0189L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
Tlie_0190 protein networkhttps://string-db.org/network/580340.Tlie_0190Signal transduction histidine kinase, LytS; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Predicted histidine kinase sensor domain; COGs: COG3275 Putative regul [...]
Tlie_0191 protein networkhttps://string-db.org/network/580340.Tlie_0191Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator conta [...]
Tlie_0192 protein networkhttps://string-db.org/network/580340.Tlie_0192Microcompartments protein; PFAM: BMC domain; COGs: COG4810 Ethanolamine utilization protein; InterPro IPR000249: IPR009307; KEGG: tai:Taci_0087 microcompartments protein; PFAM: microcompartments [...]
Tlie_0193 protein networkhttps://string-db.org/network/580340.Tlie_0193Miro domain protein; PFAM: Ethanolamine utilisation - propanediol utilisation; TIGRFAM: ethanolamine utilization protein, EutP; COGs: COG4917 Ethanolamine utilization protein; InterPro IPR013684: [...]
Tlie_0194 protein networkhttps://string-db.org/network/580340.Tlie_0194Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: tex:Teth514_1955 microcompartment [...]
Tlie_0195 protein networkhttps://string-db.org/network/580340.Tlie_0195Microcompartments protein; PFAM: BMC domain; COGs: COG4816 Ethanolamine utilization protein; InterPro IPR000249: IPR009193; KEGG: tex:Teth514_1954 microcompartments protein; PFAM: microcompartmen [...]
Tlie_0196 protein networkhttps://string-db.org/network/580340.Tlie_0196PFAM: Dehydratase large subunit; COGs: COG4909 Propanediol dehydratase large subunit; InterPro IPR003206; KEGG: tex:Teth514_1953 glycerol dehydratase; PFAM: dehydratase large subunit; PRIAM: Glyc [...]
Tlie_0197 protein networkhttps://string-db.org/network/580340.Tlie_0197PFAM: Dehydratase medium subunit; InterPro IPR003208; KEGG: dal:Dalk_4998 dehydratase medium subunit; PFAM: dehydratase medium subunit; SPTR: Glycerol dehydratase, medium subunit.
Tlie_0198 protein networkhttps://string-db.org/network/580340.Tlie_0198PFAM: Dehydratase small subunit; COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: tjr:TherJR_0620 dehydratase small subunit; PFAM: dehydratase small subunit; SPTR: P [...]
Tlie_0199 protein networkhttps://string-db.org/network/580340.Tlie_0199Diol/glycerol dehydratase reactivating factor large subunit; PFAM: Diol dehydratase reactivase ATPase-like domain; InterPro IPR009191; KEGG: tex:Teth514_1950 hypothetical protein; PFAM: Diol/glyc [...]
Tlie_0200 protein networkhttps://string-db.org/network/580340.Tlie_0200Hypothetical protein; KEGG: pfr:PFREUD_09060 glycerol dehydratase reactivation factor DhaG; SPTR: Propanediol utilization protein PduH.
Tlie_0201 protein networkhttps://string-db.org/network/580340.Tlie_0201Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: tex:Teth514_1948 microcompartments protein; [...]
Tlie_0202 protein networkhttps://string-db.org/network/580340.Tlie_0202Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: tjr:TherJR_0624 microcompartments protein; P [...]
Tlie_0203 protein networkhttps://string-db.org/network/580340.Tlie_0203Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
Tlie_0204 protein networkhttps://string-db.org/network/580340.Tlie_0204PFAM: Cell division protein FtsA; TIGRFAM: ethanolamine utilization protein EutJ family protein; COGs: COG4820 Ethanolamine utilization protein possible chaperonin; InterPro IPR013366: IPR018484; [...]
Tlie_0205 protein networkhttps://string-db.org/network/580340.Tlie_0205Hypothetical protein; KEGG: ava:Ava_4746 amino acid adenylation; SPTR: Putative uncharacterized protein.
Tlie_0206 protein networkhttps://string-db.org/network/580340.Tlie_0206Microcompartments protein; PFAM: BMC domain; KEGG: amt:Amet_3830 microcompartments protein; SPTR: Putative uncharacterized protein.
Tlie_0207 protein networkhttps://string-db.org/network/580340.Tlie_0207PFAM: Ethanolamine utilisation protein EutN/carboxysome; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: cbe:Cbei_4055 ethanolamine utili [...]
Tlie_0208 protein networkhttps://string-db.org/network/580340.Tlie_0208ATP/cobalamin adenosyltransferase; PFAM: Domain of unknown function (DUF336); Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical pr [...]
Tlie_0209 protein networkhttps://string-db.org/network/580340.Tlie_0209PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR012408; KEGG: tjr:TherJR_0630 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; [...]
Tlie_0210 protein networkhttps://string-db.org/network/580340.Tlie_0210PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR011538: IPR019554: IPR017054; KEGG: drm:Dred_1302 res [...]
Tlie_0211 protein networkhttps://string-db.org/network/580340.Tlie_0211Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249: IPR011238; KEGG: ckr:CKR_0770 hypothetical protein [...]
Tlie_0212 protein networkhttps://string-db.org/network/580340.Tlie_0212PFAM: Iron-containing alcohol dehydrogenase; COGs: COG0371 Glycerol dehydrogenase; InterPro IPR016160: IPR018211: IPR001670: IPR016205; KEGG: tjr:TherJR_0633 iron-containing alcohol dehydrogenase [...]
Tlie_0213 protein networkhttps://string-db.org/network/580340.Tlie_0213PFAM: Peptidase M15; InterPro IPR013230; KEGG: aco:Amico_1739 peptidase M15A; PFAM: Peptidase M15A; SPTR: Peptidase M15A.
Tlie_0214 protein networkhttps://string-db.org/network/580340.Tlie_0214KEGG: aco:Amico_1740 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0215 protein networkhttps://string-db.org/network/580340.Tlie_0215PFAM: Protein of unknown function (DUF2922); KEGG: aco:Amico_1741 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0216 protein networkhttps://string-db.org/network/580340.Tlie_0216PFAM: Protein of unknown function (DUF1659); KEGG: aco:Amico_1742 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0217 protein networkhttps://string-db.org/network/580340.Tlie_0217Transposase mutator type; Required for the transposition of the insertion element.
Tlie_0218 protein networkhttps://string-db.org/network/580340.Tlie_0218PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR000485; KEGG: aco:Amico_1322 transcriptional regulator, GntR family; [...]
Tlie_0219 protein networkhttps://string-db.org/network/580340.Tlie_0219TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP fam [...]
Tlie_0220 protein networkhttps://string-db.org/network/580340.Tlie_0220PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; [...]
Tlie_0221 protein networkhttps://string-db.org/network/580340.Tlie_0221PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: aco [...]
Tlie_0222 protein networkhttps://string-db.org/network/580340.Tlie_0222PFAM: Isocitrate lyase family; COGs: COG2513 PEP phosphonomutase; InterPro IPR018523: IPR000918; KEGG: aco:Amico_1317 mutase family protein; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Mut [...]
Tlie_0223 protein networkhttps://string-db.org/network/580340.Tlie_0223Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0459 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_0224 protein networkhttps://string-db.org/network/580340.Tlie_0224PFAM: Rubrerythrin; COGs: COG1592 Rubrerythrin; InterPro IPR003251: IPR004039: IPR009040; KEGG: dol:Dole_2647 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin.
Tlie_0225 protein networkhttps://string-db.org/network/580340.Tlie_0225Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; COGs: COG0426 flavoprotein; InterPro IPR001226: IPR008254: IPR016440; KEGG: dal:Dalk_2373 beta-lactamase do [...]
Tlie_0228 protein networkhttps://string-db.org/network/580340.Tlie_0228Sel1 domain protein repeat-containing protein; PFAM: Sel1 repeat; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597: IPR000169; KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 [...]
Tlie_0229 protein networkhttps://string-db.org/network/580340.Tlie_0229Hypothetical protein; KEGG: oan:Oant_2297 phage-related tail fibre protein-like protein; SPTR: Phage-related tail fibre protein-like protein.
Tlie_0230 protein networkhttps://string-db.org/network/580340.Tlie_0230PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; InterPro IPR013442; KEGG: rxy:Rxyl_0258 CRISPR-associated APE2256 family protein; PFAM: [...]
Tlie_0231 protein networkhttps://string-db.org/network/580340.Tlie_0231COGs: COG2378 transcriptional regulator protein; KEGG: aco:Amico_0924 transcriptional regulator protein-like protein; SPTR: Transcriptional regulator protein-like protein.
Tlie_0232 protein networkhttps://string-db.org/network/580340.Tlie_0232PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; COGs: COG4006 conserved hypothetical protein; InterPro IPR013442; KEGG: tra:Trad_1670 C [...]
Tlie_0235 protein networkhttps://string-db.org/network/580340.Tlie_0235CRISPR-associated protein, Csm2 family; PFAM: Protein of unknown function (DUF310); TIGRFAM: CRISPR type III-A/MTUBE-associated protein Csm2; InterPro IPR010149; KEGG: tnp:Tnap_1016 CRISPR-associ [...]
Tlie_0236 protein networkhttps://string-db.org/network/580340.Tlie_0236CRISPR-associated protein, Csm3 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3; COGs: COG1337 Uncharacterized protein predicted to be involved in DN [...]
Tlie_0237 protein networkhttps://string-db.org/network/580340.Tlie_0237CRISPR-associated protein, Csm4 family; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm4; COGs: COG1567 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfami [...]
Tlie_0238 protein networkhttps://string-db.org/network/580340.Tlie_0238PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm5; COGs: COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IP [...]
Tlie_0239 protein networkhttps://string-db.org/network/580340.Tlie_0239Hypothetical protein; KEGG: ote:Oter_4003 glycosyl transferase group 1; SPTR: Putative uncharacterized protein.
Tlie_0240 protein networkhttps://string-db.org/network/580340.Tlie_0240CRISPR-associated protein, Cas6 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (v [...]
Tlie_0241 protein networkhttps://string-db.org/network/580340.Tlie_0241Protein of unknown function DUF48; PFAM: CRISPR associated protein Cas1; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: bfr:BF2544 hypothe [...]
Tlie_0242 protein networkhttps://string-db.org/network/580340.Tlie_0242PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_0243 protein networkhttps://string-db.org/network/580340.Tlie_0243KEGG: ach:Achl_0351 5-dehydro-4-deoxyglucarate dehydratase; SPTR: Probable 5-dehydro-4-deoxyglucarate dehydratase.
Tlie_0244 protein networkhttps://string-db.org/network/580340.Tlie_0244Hypothetical protein; KEGG: cci:CC1G_05661 clathrin heavy chain 1; SPTR: Sigma factor-binding protein Crl.
Tlie_0245 protein networkhttps://string-db.org/network/580340.Tlie_0245Protein of unknown function DUF48; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair [...]
cas2 protein networkhttps://string-db.org/network/580340.Tlie_0246CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...]
cas2-2 protein networkhttps://string-db.org/network/580340.Tlie_0247CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...]
Tlie_0248 protein networkhttps://string-db.org/network/580340.Tlie_0248Hypothetical protein.
Tlie_0249 protein networkhttps://string-db.org/network/580340.Tlie_0249PFAM: Citrate synthase; COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: tai:Taci_0447 citrate synthase-like protein; PFAM: Citrate synthase; SPTR: Citrate synthase-like protein.
Tlie_0250 protein networkhttps://string-db.org/network/580340.Tlie_0250GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: aoe:Clos_0046 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncha [...]
Tlie_0251 protein networkhttps://string-db.org/network/580340.Tlie_0251PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846 [...]
Tlie_0252 protein networkhttps://string-db.org/network/580340.Tlie_0252Hypothetical protein; PFAM: DsrE/DsrF-like family; KEGG: dat:HRM2_17470 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0253 protein networkhttps://string-db.org/network/580340.Tlie_0253Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: bbe:BBR47_11890 hypothetical protein; PFAM: protein of unknown function DUF6 transmem [...]
Tlie_0254 protein networkhttps://string-db.org/network/580340.Tlie_0254PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR003018: IPR000160; KEGG: tai:Taci_1538 diguanylate cyclase with GAF senso [...]
aroD protein networkhttps://string-db.org/network/580340.Tlie_02553-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DH [...]
Tlie_0256 protein networkhttps://string-db.org/network/580340.Tlie_0256PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: lbc:LACBIDRAFT_177008 saccharopine dehydrogenase; PFAM: Saccharopine dehy [...]
Tlie_0257 protein networkhttps://string-db.org/network/580340.Tlie_0257KEGG: nth:Nther_0921 Na+/H+ antiporter NhaC; SPTR: Na(+)/H(+) antiporter.
Tlie_0258 protein networkhttps://string-db.org/network/580340.Tlie_0258PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR000485: IPR011711; KEGG: dat:HRM2_15280 transcriptional regulator (G [...]
Tlie_0259 protein networkhttps://string-db.org/network/580340.Tlie_0259ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrola [...]
Tlie_0260 protein networkhttps://string-db.org/network/580340.Tlie_0260CRISPR-associated protein, Cas6 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (v [...]
Tlie_0261 protein networkhttps://string-db.org/network/580340.Tlie_0261PFAM: CRISPR-associated protein TM1802 (cas_TM1802); InterPro IPR013389; KEGG: tjr:TherJR_2495 CRISPR-associated protein TM1802 family; PFAM: CRISPR-associated protein TM1802; SPTR: Putative unch [...]
Tlie_0262 protein networkhttps://string-db.org/network/580340.Tlie_0262PFAM: CRISPR-associated protein TM1802 (cas_TM1802); KEGG: tjr:TherJR_2494 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0263 protein networkhttps://string-db.org/network/580340.Tlie_0263PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI; COGs: COG3649 Uncharacterized protein predict [...]
Tlie_0264 protein networkhttps://string-db.org/network/580340.Tlie_0264CRISPR-associated protein, Cas5h family; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain; [...]
Tlie_0265 protein networkhttps://string-db.org/network/580340.Tlie_0265CRISPR-associated helicase, Cas3 family; PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; COGs: COG1203 helicase; InterPr [...]
Tlie_0266 protein networkhttps://string-db.org/network/580340.Tlie_0266CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, t [...]
cas1 protein networkhttps://string-db.org/network/580340.Tlie_0267CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...]
cas2-3 protein networkhttps://string-db.org/network/580340.Tlie_0268CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (v [...]
Tlie_0270 protein networkhttps://string-db.org/network/580340.Tlie_0270Metal dependent phosphohydrolase; PFAM: HD domain; 5TMR of 5TMR-LYT; TIGRFAM: uncharacterized domain HDIG; COGs: COG2206 HD-GYP domain; InterPro IPR003607: IPR006675: IPR011620: IPR006674; KEGG: [...]
Tlie_0271 protein networkhttps://string-db.org/network/580340.Tlie_0271Amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: aco:Amico_0114 amino acid ca [...]
Tlie_0272 protein networkhttps://string-db.org/network/580340.Tlie_0272PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR003881: IPR018120: IPR000868; KEGG: sfu:Sfum_2603 isochorismatase hydrolase; PFAM: isochorismatase hydro [...]
lolD protein networkhttps://string-db.org/network/580340.Tlie_0273ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmi [...]
Tlie_0274 protein networkhttps://string-db.org/network/580340.Tlie_0274Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dae:Dtox_2873 p [...]
Tlie_0275 protein networkhttps://string-db.org/network/580340.Tlie_0275PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dae:Dtox_2872 efflux transporte [...]
Tlie_0276 protein networkhttps://string-db.org/network/580340.Tlie_0276PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mma:MM_1582 iron-sulfur flavoprotein; PFAM: NADPH-dependent FMN reductase; SPTR: Iron-sulf [...]
Tlie_0277 protein networkhttps://string-db.org/network/580340.Tlie_0277PFAM: Protein of unknown function (DUF1445); COGs: COG4336 conserved hypothetical protein; InterPro IPR009906: IPR016938; KEGG: aco:Amico_0499 protein of unknown function DUF1445; PFAM: protein o [...]
pxpA protein networkhttps://string-db.org/network/580340.Tlie_0278LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
Tlie_0279 protein networkhttps://string-db.org/network/580340.Tlie_0279Urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR00 [...]
Tlie_0280 protein networkhttps://string-db.org/network/580340.Tlie_0280PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833: IPR010016; KEGG: aco:Amico_0496 allophanate hydrolase [...]
Tlie_0281 protein networkhttps://string-db.org/network/580340.Tlie_0281Transmembrane transport protein; PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: tai:Taci_0711 transmembrane transport p [...]
Tlie_0282 protein networkhttps://string-db.org/network/580340.Tlie_0282PFAM: Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homo [...]
Tlie_0283 protein networkhttps://string-db.org/network/580340.Tlie_0283Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2 [...]
Tlie_0284 protein networkhttps://string-db.org/network/580340.Tlie_0284Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4191 Sig [...]
Tlie_0285 protein networkhttps://string-db.org/network/580340.Tlie_0285PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: amt:Amet_2980 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; Be [...]
Tlie_0286 protein networkhttps://string-db.org/network/580340.Tlie_0286PFAM: Aminotransferase class I and II; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004838: IPR004839; KEGG: tsi:TSIB_1557 hypothetical [...]
Tlie_0287 protein networkhttps://string-db.org/network/580340.Tlie_0287Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT / AbrB like domain; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: mta:Moth_1020 transcriptional regulator/antitoxin, MazE; PFAM: [...]
Tlie_0289 protein networkhttps://string-db.org/network/580340.Tlie_0289PFAM: Rhodanese-like domain; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: ent:Ent638_1690 rhodanese domain-containing protein; PFAM: Rhodanese domain pr [...]
Tlie_0290 protein networkhttps://string-db.org/network/580340.Tlie_0290PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_0291 protein networkhttps://string-db.org/network/580340.Tlie_0291PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; COGs: COG1410 Methionine synthase I cobalamin-binding domai [...]
Tlie_0292 protein networkhttps://string-db.org/network/580340.Tlie_0292PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620: IPR0031 [...]
Tlie_0293 protein networkhttps://string-db.org/network/580340.Tlie_0293PFAM: HpcH/HpaI aldolase/citrate lyase family; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: aco:Amico_1892 4-hydroxy-2-oxovalerate aldolase; PFAM: HpcH [...]
Tlie_0294 protein networkhttps://string-db.org/network/580340.Tlie_0294Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding r [...]
glsA protein networkhttps://string-db.org/network/580340.Tlie_0295L-glutaminase; PFAM: Glutaminase; TIGRFAM: glutaminase A; COGs: COG2066 Glutaminase; InterPro IPR015868; KEGG: tai:Taci_0795 glutaminase; PFAM: Glutaminase, core; PRIAM: Glutaminase; SPTR: Glutam [...]
fhs protein networkhttps://string-db.org/network/580340.Tlie_0296PFAM: Formate--tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR020628: IPR000559; KEGG: tai:Taci_0816 formate--tetrahydrofolate ligase; PFAM: formate-tetrahy [...]
Tlie_0297 protein networkhttps://string-db.org/network/580340.Tlie_0297Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin; 4Fe-4S binding domain; InterPro IPR017900: IPR001226: IPR008254: IPR017896; KEGG: amt:Amet_1430 4Fe-4S ferredoxin iron-sulfur binding domain-co [...]
Tlie_0298 protein networkhttps://string-db.org/network/580340.Tlie_0298phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
Tlie_0299 protein networkhttps://string-db.org/network/580340.Tlie_0299Hypothetical protein.
Tlie_0300 protein networkhttps://string-db.org/network/580340.Tlie_0300ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR004369: IPR007214; KEGG: sth:STH16 [...]
Tlie_0301 protein networkhttps://string-db.org/network/580340.Tlie_0301PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon; COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aco: [...]
Tlie_0302 protein networkhttps://string-db.org/network/580340.Tlie_0302Putative reductive dehalogenase; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR017896; KEGG: cdl:CDR20291_1881 putative reductive dehalogenase; SPTR: Reductive dehalogenase s [...]
Tlie_0303 protein networkhttps://string-db.org/network/580340.Tlie_0303Hypothetical protein; KEGG: dau:Daud_0321 integrase catalytic subunit; SPTR: Integrase, catalytic region.
Tlie_0304 protein networkhttps://string-db.org/network/580340.Tlie_0304Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0459 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_0305 protein networkhttps://string-db.org/network/580340.Tlie_0305Hypothetical protein; KEGG: lba:Lebu_2246 DNA adenine methylase; SPTR: Putative uncharacterized protein.
Tlie_0306 protein networkhttps://string-db.org/network/580340.Tlie_0306DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; COGs: COG0863 DNA modification methylase; InterPro IPR001091: IPR002052: IPR002941; KEGG: emi:Emin_0686 DNA methylase N-4/N-6 domain-con [...]
Tlie_0307 protein networkhttps://string-db.org/network/580340.Tlie_0307Type II site-specific deoxyribonuclease; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family.
Tlie_0310 protein networkhttps://string-db.org/network/580340.Tlie_0310PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656: IPR004681; KEGG: dat [...]
Tlie_0311 protein networkhttps://string-db.org/network/580340.Tlie_0311PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: dat:HRM2_4 [...]
Tlie_0312 protein networkhttps://string-db.org/network/580340.Tlie_0312TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP fam [...]
Tlie_0313 protein networkhttps://string-db.org/network/580340.Tlie_0313Protein of unknown function DUF2207, membrane; PFAM: Predicted membrane protein (DUF2207); InterPro IPR018702; KEGG: dma:DMR_20450 hypothetical membrane protein; PFAM: Protein of unknown function [...]
Tlie_0314 protein networkhttps://string-db.org/network/580340.Tlie_0314PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: aco:Amico_0905 LemA family protein; PFAM: LemA family protein; SPTR: LemA family protein.
gyrB protein networkhttps://string-db.org/network/580340.Tlie_0315DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
Tlie_0316 protein networkhttps://string-db.org/network/580340.Tlie_0316KEGG: aco:Amico_1646 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0317 protein networkhttps://string-db.org/network/580340.Tlie_0317PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: mav:MAV_5193 isochorismatase family protein; PFAM: isochorismatase hydrolase; SPTR: Isocho [...]
Tlie_0318 protein networkhttps://string-db.org/network/580340.Tlie_0318PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212: IPR014016: IPR014017; KEGG: aco:Amico_1 [...]
Tlie_0319 protein networkhttps://string-db.org/network/580340.Tlie_0319Hypothetical protein; PFAM: Domain of unknown function DUF83; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: aco:Amico_1643 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0320 protein networkhttps://string-db.org/network/580340.Tlie_0320KEGG: pbe:PB000229.02.0 pre-mRNA splicing factor.
Tlie_0321 protein networkhttps://string-db.org/network/580340.Tlie_0321Hypothetical protein.
Tlie_0322 protein networkhttps://string-db.org/network/580340.Tlie_0322PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: aco:Amico_0348 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_ [...]
Tlie_0323 protein networkhttps://string-db.org/network/580340.Tlie_0323KEGG: aco:Amico_0345 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0324 protein networkhttps://string-db.org/network/580340.Tlie_0324GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: lpa:lpa_01688 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncha [...]
Tlie_0325 protein networkhttps://string-db.org/network/580340.Tlie_0325Export-related chaperone CsaA; PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; export-related chaperone CsaA; COGs: COG0073 EMAP domain; Inter [...]
Tlie_0326 protein networkhttps://string-db.org/network/580340.Tlie_0326Hypothetical protein; KEGG: shn:Shewana3_3661 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
Tlie_0327 protein networkhttps://string-db.org/network/580340.Tlie_0327PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: hmo:HM1_3 [...]
Tlie_0328 protein networkhttps://string-db.org/network/580340.Tlie_0328PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: dba:Dbac_1905 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPT [...]
Tlie_0329 protein networkhttps://string-db.org/network/580340.Tlie_0329TIGRFAM: small redox-active disulfide protein 2; InterPro IPR005243; KEGG: aco:Amico_0061 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide [...]
Tlie_0330 protein networkhttps://string-db.org/network/580340.Tlie_0330Permease; PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: tai:Taci_1478 permease; PFAM: permease; SPTR: Permease.
Tlie_0331 protein networkhttps://string-db.org/network/580340.Tlie_0331PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: glo:Glov_2254 BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: [...]
Tlie_0332 protein networkhttps://string-db.org/network/580340.Tlie_0332Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: ckr:CKR_0613 hypothetical protein; PFAM: protein of unknown function DUF6 transmembra [...]
Tlie_0333 protein networkhttps://string-db.org/network/580340.Tlie_0333PFAM: Major Facilitator Superfamily; InterPro IPR011701: IPR005829; KEGG: aco:Amico_1812 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator su [...]
Tlie_0334 protein networkhttps://string-db.org/network/580340.Tlie_0334PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: slo:Shew_3296 protease Do; SMART: PDZ/DHR/GLGF domain protein; SPTR: Protease Do.
Tlie_0335 protein networkhttps://string-db.org/network/580340.Tlie_0335PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: aco:Amico_1758 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrol [...]
Tlie_0336 protein networkhttps://string-db.org/network/580340.Tlie_0336PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197: IPR003739; KEGG: aco:Amico_0 [...]
Tlie_0337 protein networkhttps://string-db.org/network/580340.Tlie_0337PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR0 [...]
Tlie_0338 protein networkhttps://string-db.org/network/580340.Tlie_0338PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: sse:Ssed_1817 SSS family solute/sodium (Na+) symporter; PFAM [...]
Tlie_0340 protein networkhttps://string-db.org/network/580340.Tlie_0340PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_0341 protein networkhttps://string-db.org/network/580340.Tlie_0341Transposase IS200-family protein; PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: gwc:GWCH70_3001 transposase IS200-family protein; [...]
Tlie_0342 protein networkhttps://string-db.org/network/580340.Tlie_0342Transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG067 [...]
Tlie_0344 protein networkhttps://string-db.org/network/580340.Tlie_0344Hypothetical protein; KEGG: hmg:100201659 similar to predicted protein; SPTR: Putative uncharacterized protein.
Tlie_0345 protein networkhttps://string-db.org/network/580340.Tlie_0345PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: aco:Amico_0182 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS [...]
Tlie_0346 protein networkhttps://string-db.org/network/580340.Tlie_0346PFAM: Peptidase family M20/M25/M40; COGs: COG4187 Arginine degradation protein (predicted deacylase); InterPro IPR002933: IPR012166: IPR018130; KEGG: aco:Amico_0153 peptidase M20; PFAM: peptidase [...]
Tlie_0347 protein networkhttps://string-db.org/network/580340.Tlie_0347Protein of unknown function DUF988; PFAM: QueT transporter; COGs: COG4708 membrane protein; InterPro IPR010387; KEGG: aco:Amico_1003 protein of unknown function DUF988; PFAM: protein of unknown f [...]
Tlie_0348 protein networkhttps://string-db.org/network/580340.Tlie_0348PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0444 ABC-type dipep [...]
Tlie_0349 protein networkhttps://string-db.org/network/580340.Tlie_0349PFAM: ABC transporter; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: aco:Amico_1780 ABC transporter relat [...]
Tlie_0350 protein networkhttps://string-db.org/network/580340.Tlie_0350PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ac [...]
Tlie_0351 protein networkhttps://string-db.org/network/580340.Tlie_0351PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ac [...]
Tlie_0352 protein networkhttps://string-db.org/network/580340.Tlie_0352PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: aco:Amico_1777 extracell [...]
Tlie_0353 protein networkhttps://string-db.org/network/580340.Tlie_0353PFAM: PHP domain; COGs: COG1796 DNA polymerase IV (family X); InterProIPR004013: IPR002054: IPR003583: IPR003141: IPR 002008; KEGG: ttr:Tter_1075 PHP domain protein; PFAM: PHP domain protein; SMA [...]
Tlie_0354 protein networkhttps://string-db.org/network/580340.Tlie_0354PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: tai:Taci_1646 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SP [...]
Tlie_0355 protein networkhttps://string-db.org/network/580340.Tlie_0355PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR001411; KEGG: drt:Dret_2117 major facilitator superfamily MFS_1; PFAM: major facilitator super [...]
Tlie_0356 protein networkhttps://string-db.org/network/580340.Tlie_0356PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mta:Moth_1212 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase.
Tlie_0357 protein networkhttps://string-db.org/network/580340.Tlie_0357Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: mgm:Mmc1_3430 diguanylate cyclase; PFAM: GGDEF dom [...]
Tlie_0358 protein networkhttps://string-db.org/network/580340.Tlie_0358Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: HD domain; Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR0026 [...]
Tlie_0359 protein networkhttps://string-db.org/network/580340.Tlie_0359PFAM: 4Fe-4S binding domain; InterPro IPR017896: IPR017900: IPR001080; KEGG: tai:Taci_0375 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain [...]
Tlie_0360 protein networkhttps://string-db.org/network/580340.Tlie_0360PFAM: Calcium/calmodulin dependent protein kinase II Association; InterPro IPR013543; KEGG: ttj:TTHA1247 hypothetical protein; PFAM: Calcium/calmodulin dependent protein kinase II association-dom [...]
gpsA protein networkhttps://string-db.org/network/580340.Tlie_0361PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR01112 [...]
Tlie_0362 protein networkhttps://string-db.org/network/580340.Tlie_0362Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: aco:Amico_1621 diguanylate cyclase with GAF sensor [...]
Tlie_0363 protein networkhttps://string-db.org/network/580340.Tlie_0363PFAM: Cupin domain; InterPro IPR013096; KEGG: cyt:cce_2077 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein.
Tlie_0364 protein networkhttps://string-db.org/network/580340.Tlie_0364Hypothetical protein; PFAM: Domain of unknown function (DUF955); KEGG: dba:Dbac_1265 cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5 6-dimethylbenzimidazole phosphoribosyltransfe [...]
Tlie_0365 protein networkhttps://string-db.org/network/580340.Tlie_0365PFAM: Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR001440: IPR019734: IPR013026; KEGG: cyh:Cyan8802_1328 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Tetrat [...]
Tlie_0366 protein networkhttps://string-db.org/network/580340.Tlie_0366Putative tyrosine transporter P-protein (TC 2.A.45.2.1); PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680: IPR000802; KEGG: tai:Ta [...]
Tlie_0367 protein networkhttps://string-db.org/network/580340.Tlie_0367Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005859: IPR0006 [...]
Tlie_0368 protein networkhttps://string-db.org/network/580340.Tlie_0368TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451: IPR005881; KEGG: dtu:Dtur_1260 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRF [...]
Tlie_0369 protein networkhttps://string-db.org/network/580340.Tlie_0369Arginase/agmatinase/formiminoglutamase; PFAM: Arginase family; TIGRFAM: formimidoylglutamase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; [...]
hutU protein networkhttps://string-db.org/network/580340.Tlie_0370Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
Tlie_0371 protein networkhttps://string-db.org/network/580340.Tlie_0371Glutamate formimidoyltransferase; PFAM: Formiminotransferase-cyclodeaminase; COGs: COG3404 Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR007044; KEGG: tai:Taci_0913 formimidoyltetrahydrof [...]
hutI protein networkhttps://string-db.org/network/580340.Tlie_0372Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680: IPR005920; KEGG: aco:Amico_ [...]
Tlie_0373 protein networkhttps://string-db.org/network/580340.Tlie_0373PFAM: Formiminotransferase domain, N-terminal subdomain; Formiminotransferase domain; TIGRFAM: glutamate formiminotransferase; COGs: COG3643 Glutamate formiminotransferase; InterPro IPR012886: IP [...]
Tlie_0374 protein networkhttps://string-db.org/network/580340.Tlie_0374PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: aco:Amico_1883 transcriptional regulator, Ic [...]
Tlie_0375 protein networkhttps://string-db.org/network/580340.Tlie_0375PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ank:AnaeK_2009 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratas [...]
Tlie_0378 protein networkhttps://string-db.org/network/580340.Tlie_0378Hypothetical protein; KEGG: pdi:BDI_0627 cytochrome c biogenesis protein; SPTR: Putative uncharacterized protein.
Tlie_0379 protein networkhttps://string-db.org/network/580340.Tlie_0379PFAM: Choline/Carnitine o-acyltransferase; InterPro IPR000542; KEGG: sse:Ssed_1774 carnitine O-acetyltransferase; PFAM: acyltransferase ChoActase/COT/CPT family; PRIAM: Carnitine O-acetyltransfer [...]
Tlie_0380 protein networkhttps://string-db.org/network/580340.Tlie_0380Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: tte:TTE2629 DMT family permease; PFAM: protein of unknown function DUF6 transmembrane [...]
Tlie_0381 protein networkhttps://string-db.org/network/580340.Tlie_0381phenylacetate-CoA ligase; PFAM: AMP-binding enzyme; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: adg:Adeg_0166 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and l [...]
Tlie_0382 protein networkhttps://string-db.org/network/580340.Tlie_0382PFAM: Transposase IS116/IS110/IS902 family; InterPro IPR003346; KEGG: ots:OTBS_0082 transposase and inactivated derivative; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative tran [...]
Tlie_0383 protein networkhttps://string-db.org/network/580340.Tlie_0383LL-diaminopimelate aminotransferase apoenzyme; PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR004838; KEGG: pth:PTH_1308 [...]
Tlie_0384 protein networkhttps://string-db.org/network/580340.Tlie_0384PFAM: Protein of unknown function DUF82; COGs: COG1656 conserved hypothetical protein; InterPro IPR002782; KEGG: aco:Amico_0559 protein of unknown function DUF82; PFAM: protein of unknown functio [...]
Tlie_0385 protein networkhttps://string-db.org/network/580340.Tlie_0385Protein of unknown function UPF0047; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IP [...]
Tlie_0386 protein networkhttps://string-db.org/network/580340.Tlie_0386Trehalose 6-phosphate synthase; PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR001 [...]
Tlie_0387 protein networkhttps://string-db.org/network/580340.Tlie_0387PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; COGs: COG0120 Ribose 5-phosphate isomerase; InterPro IPR004788; KEGG: mfe:Mefer_1518 ribose-5 [...]
Tlie_0388 protein networkhttps://string-db.org/network/580340.Tlie_0388Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: tko:TK1797 DMT family permease; PFAM: protein of unknown function DUF6 transmembrane; [...]
Tlie_0389 protein networkhttps://string-db.org/network/580340.Tlie_0389KEGG: dat:HRM2_08280 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0390 protein networkhttps://string-db.org/network/580340.Tlie_0390Hypothetical protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG3640 CO dehydrogenase maturation factor; KEGG: mtp:Mthe_0511 cobyrinic acid a,c-diamide synthase; SPTR: CODH ni [...]
Tlie_0391 protein networkhttps://string-db.org/network/580340.Tlie_0391PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818: IPR006286; KEGG: aco:Amico_0247 ThiJ/PfpI domain p [...]
Tlie_0392 protein networkhttps://string-db.org/network/580340.Tlie_0392PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: aco:Amico_0250 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase.
gyrA protein networkhttps://string-db.org/network/580340.Tlie_0393DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
psd protein networkhttps://string-db.org/network/580340.Tlie_0394Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
Tlie_0395 protein networkhttps://string-db.org/network/580340.Tlie_0395PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462: IPR004533; KEGG: aco:Amico [...]
Tlie_0396 protein networkhttps://string-db.org/network/580340.Tlie_0396PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: putative proton-coupled thiamine transporter YuaJ; COGs: COG3859 membrane protein; InterPro IPR012651; KEGG: aco:Amico_0262 proton-coupled [...]
Tlie_0397 protein networkhttps://string-db.org/network/580340.Tlie_0397Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR000634; KE [...]
Tlie_0398 protein networkhttps://string-db.org/network/580340.Tlie_0398PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-ter [...]
Tlie_0399 protein networkhttps://string-db.org/network/580340.Tlie_0399PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain [...]
Tlie_0400 protein networkhttps://string-db.org/network/580340.Tlie_0400YidE/YbjL duplication; PFAM: Predicted Permease Membrane Region; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain; COGs: COG2985 permease; InterPro IPR006512; KEGG: tai:Taci_0300 YidE/YbjL d [...]
Tlie_0401 protein networkhttps://string-db.org/network/580340.Tlie_0401PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099: IPR006098; KEGG: tai:Tac [...]
Tlie_0402 protein networkhttps://string-db.org/network/580340.Tlie_0402Cobalamin B12-binding domain protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-bi [...]
Tlie_0403 protein networkhttps://string-db.org/network/580340.Tlie_0403methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; InterPro IPR004360: IPR017515; KEGG: aco:Amico_0266 methy [...]
Tlie_0404 protein networkhttps://string-db.org/network/580340.Tlie_0404PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022: IPR011762: IPR011763: IPR000438; KEGG: tai:Tac [...]
Tlie_0405 protein networkhttps://string-db.org/network/580340.Tlie_0405Sodium pump decarboxylase gamma subunit; PFAM: Oxaloacetate decarboxylase, gamma chain; InterPro IPR005899; KEGG: tai:Taci_0292 sodium pump decarboxylase gamma subunit; PFAM: sodium pump decarbox [...]
Tlie_0406 protein networkhttps://string-db.org/network/580340.Tlie_0406Biotin/lipoyl attachment domain-containing protein; PFAM: Biotin-requiring enzyme; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089: IPR001882; KEGG: aco:Amico_0269 biotin/lipoyl [...]
Tlie_0407 protein networkhttps://string-db.org/network/580340.Tlie_0407PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: a [...]
Tlie_0408 protein networkhttps://string-db.org/network/580340.Tlie_0408Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: csc:Csac_2481 methyltransferase type [...]
Tlie_0409 protein networkhttps://string-db.org/network/580340.Tlie_0409PFAM: Protein of unknown function (DUF1393); KEGG: nth:Nther_2289 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0410 protein networkhttps://string-db.org/network/580340.Tlie_0410Hypothetical protein; PFAM: Serine dehydratase alpha chain; COGs: COG3681 conserved hypothetical protein; InterPro IPR021144; KEGG: dvm:DvMF_1488 protein of unknown function DUF1063; SPTR: UPF059 [...]
Tlie_0411 protein networkhttps://string-db.org/network/580340.Tlie_0411PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: aco:Amico_0274 lipid A biosynthesis acyltransferase; PFAM: lipid A [...]
Tlie_0412 protein networkhttps://string-db.org/network/580340.Tlie_0412KEGG: aco:Amico_0275 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0413 protein networkhttps://string-db.org/network/580340.Tlie_0413KEGG: cpo:COPRO5265_1024 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0414 protein networkhttps://string-db.org/network/580340.Tlie_0414Cl- channel voltage-gated family protein; PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: aco:Amico_0276 Cl-channel voltage-gated fami [...]
Tlie_0415 protein networkhttps://string-db.org/network/580340.Tlie_0415PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; COGs: COG1794 Aspartate racemase; InterPro IPR015942: IPR004380: IPR018187; KEGG: aco:Amico_1686 aspartate racemase; PFAM: Asp/Glu/h [...]
Tlie_0416 protein networkhttps://string-db.org/network/580340.Tlie_0416PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: aco:Amico_0278 patatin; PFAM: Patatin; SPTR: Patatin.
proS protein networkhttps://string-db.org/network/580340.Tlie_0417prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
Tlie_0418 protein networkhttps://string-db.org/network/580340.Tlie_0418Appr-1-p processing domain protein; PFAM: Macro domain; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: pth:PTH_2212 phosphatase; PFA [...]
deoC protein networkhttps://string-db.org/network/580340.Tlie_0419Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB ald [...]
Tlie_0420 protein networkhttps://string-db.org/network/580340.Tlie_0420KEGG: aco:Amico_0286 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0421 protein networkhttps://string-db.org/network/580340.Tlie_0421PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106: IPR001342: IPR019811; KEGG: aco:Amico_0287 homoserine deh [...]
Tlie_0422 protein networkhttps://string-db.org/network/580340.Tlie_0422PFAM: PHP domain; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013: IPR003141; KEGG: aco:Amico_0289 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoester [...]
Tlie_0423 protein networkhttps://string-db.org/network/580340.Tlie_0423L-threonine aldolase; PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: aco:Amico_0290 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase [...]
Tlie_0424 protein networkhttps://string-db.org/network/580340.Tlie_0424PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: aco:Amico_0291 peptidase U62 modulator of DNA gyrase; PFAM: p [...]
Tlie_0425 protein networkhttps://string-db.org/network/580340.Tlie_0425Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: aco:Amico_0292 N-acetylmuramoyl-L-alanine amid [...]
Tlie_0426 protein networkhttps://string-db.org/network/580340.Tlie_0426Lipoprotein LpqB, GerMN domain protein; PFAM: Sporulation and spore germination; InterPro IPR019606; KEGG: aco:Amico_0293 hypothetical protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Putativ [...]
rph protein networkhttps://string-db.org/network/580340.Tlie_0427RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides [...]
Tlie_0428 protein networkhttps://string-db.org/network/580340.Tlie_0428Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...]
Tlie_0429 protein networkhttps://string-db.org/network/580340.Tlie_0429Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
Tlie_0430 protein networkhttps://string-db.org/network/580340.Tlie_0430PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002 [...]
rplM protein networkhttps://string-db.org/network/580340.Tlie_0431LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stage [...]
rpsI protein networkhttps://string-db.org/network/580340.Tlie_0432PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754: IPR020574; KEGG: aco:Amico_0299 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal prote [...]
Tlie_0433 protein networkhttps://string-db.org/network/580340.Tlie_0433Magnesium transporter; Acts as a magnesium transporter.
Tlie_0434 protein networkhttps://string-db.org/network/580340.Tlie_0434PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: aco:Amico_0301 transcriptional regulator, TetR family; PFAM: regulatory protei [...]
Tlie_0435 protein networkhttps://string-db.org/network/580340.Tlie_0435PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aco:Amico_0302 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer [...]
Tlie_0436 protein networkhttps://string-db.org/network/580340.Tlie_0436PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: aco:Amico_0303 efflux transporter, RND f [...]
Tlie_0437 protein networkhttps://string-db.org/network/580340.Tlie_0437Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Fam [...]
Tlie_0438 protein networkhttps://string-db.org/network/580340.Tlie_0438KEGG: aco:Amico_0305 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0439 protein networkhttps://string-db.org/network/580340.Tlie_0439Hypothetical protein; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; COGs: COG1470 membrane protein; KEGG: mrb:Mrub_0459 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0440 protein networkhttps://string-db.org/network/580340.Tlie_0440PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: tte:TTE1863 ABC-type multidrug transport system, ATPase [...]
Tlie_0441 protein networkhttps://string-db.org/network/580340.Tlie_0441ABC-type transport, permease protein; COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; InterPro IPR017871; KEGG: bth:BT_0926 ABC-type transpo [...]
tuf protein networkhttps://string-db.org/network/580340.Tlie_0442Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpmG protein networkhttps://string-db.org/network/580340.Tlie_0443PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; InterPro IPR001705; KEGG: tai:Taci_1514 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protei [...]
secE protein networkhttps://string-db.org/network/580340.Tlie_0444Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
nusG protein networkhttps://string-db.org/network/580340.Tlie_0445NusG antitermination factor; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/580340.Tlie_0446LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/580340.Tlie_0447Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplJ protein networkhttps://string-db.org/network/580340.Tlie_0448LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal pro [...]
rplL protein networkhttps://string-db.org/network/580340.Tlie_0449LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bact [...]
Tlie_0450 protein networkhttps://string-db.org/network/580340.Tlie_0450Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902: IPR001120; KEGG: sat:SYN_01760 hypothetica [...]
Tlie_0451 protein networkhttps://string-db.org/network/580340.Tlie_0451Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902: IPR001120; KEGG: tai:Taci_1050 hypothetica [...]
Tlie_0452 protein networkhttps://string-db.org/network/580340.Tlie_0452Hypothetical protein; KEGG: dha:DEHA2A11220g DEHA2A11220p; SPTR: Putative uncharacterized protein.
Tlie_0453 protein networkhttps://string-db.org/network/580340.Tlie_0453Hypothetical protein; KEGG: cja:CJA_3211 putative fimbrial protein; SPTR: Putative fimbrial protein.
nfi protein networkhttps://string-db.org/network/580340.Tlie_0454Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the int [...]
Tlie_0455 protein networkhttps://string-db.org/network/580340.Tlie_0455PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: aco:Amico_0320 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2.
Tlie_0456 protein networkhttps://string-db.org/network/580340.Tlie_0456Transporter, CPA2 family (TC 2.A.37); PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153: IP [...]
Tlie_0457 protein networkhttps://string-db.org/network/580340.Tlie_0457KEGG: adg:Adeg_1238 integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_0458 protein networkhttps://string-db.org/network/580340.Tlie_0458Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family; KEGG: deg:DehalGT_0071 phage transcriptional regulator, AlpA; SPTR: Phage transcriptional regulator, AlpA.
Tlie_0459 protein networkhttps://string-db.org/network/580340.Tlie_0459PFAM: Protein of unknown function (DUF499); KEGG: mca:MCA2686 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0460 protein networkhttps://string-db.org/network/580340.Tlie_0460KEGG: pph:Ppha_2128 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0461 protein networkhttps://string-db.org/network/580340.Tlie_0461PFAM: Protein of unknown function (DUF1156); COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; InterPro IPR009537: IPR002052; KEGG: vei:Veis_0099 hypothetical protein; PFAM: pr [...]
Tlie_0462 protein networkhttps://string-db.org/network/580340.Tlie_0462KEGG: vei:Veis_0100 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0463 protein networkhttps://string-db.org/network/580340.Tlie_0463PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR000330: IPR001650: IPR014021: IPR014001; KEGG: mpo:Mpop [...]
Tlie_0464 protein networkhttps://string-db.org/network/580340.Tlie_0464KEGG: aco:Amico_0931 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0465 protein networkhttps://string-db.org/network/580340.Tlie_0465AAA ATPase; PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR003593; KEGG: acl:ACL_1054 hypothetical protein; SMART: AAA A [...]
Tlie_0466 protein networkhttps://string-db.org/network/580340.Tlie_0466KEGG: dau:Daud_0504 hypothetical protein; SPTR: Putative uncharacterized protein.
sbcD protein networkhttps://string-db.org/network/580340.Tlie_0467Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts [...]
Tlie_0468 protein networkhttps://string-db.org/network/580340.Tlie_0468Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
Tlie_0469 protein networkhttps://string-db.org/network/580340.Tlie_0469Hypothetical protein; KEGG: bsu:BSU20350 putative single-strand DNA-specific exonuclease; phage SPbeta; SPTR: YD repeat protein.
Tlie_0470 protein networkhttps://string-db.org/network/580340.Tlie_0470PFAM: Rubrerythrin; InterPro IPR003251; KEGG: fno:Fnod_0888 rubrerythrin; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein.
Tlie_0471 protein networkhttps://string-db.org/network/580340.Tlie_0471Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: bfs:BF1671 hypothetical protein; PFAM [...]
Tlie_0472 protein networkhttps://string-db.org/network/580340.Tlie_0472Zinc/iron permease; PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: cbf:CLI_1259 ZIP family zinc transporter; PFAM: zinc/iron permeas [...]
Tlie_0473 protein networkhttps://string-db.org/network/580340.Tlie_0473PFAM: Na+/H+ ion antiporter subunit; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: kol:Kole_0564 cation antiporter; PFAM: cation antiporter; SPTR: Putative [...]
Tlie_0474 protein networkhttps://string-db.org/network/580340.Tlie_0474PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro IPR007208; KEGG: hor:Hore_12110 multiple resistance and pH regulation protein F; PFAM: multiple resistance and pH reg [...]
Tlie_0475 protein networkhttps://string-db.org/network/580340.Tlie_0475PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: hor:Hore_121 [...]
Tlie_0476 protein networkhttps://string-db.org/network/580340.Tlie_0476KEGG: pmo:Pmob_0894 hypothetical protein; SPTR: Multiple resistance/pH regulation related protein A.
Tlie_0477 protein networkhttps://string-db.org/network/580340.Tlie_0477PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: hor:Hore_12080 Na+/H+ antiporter MnhB subunit-related protein; PFAM: Na+/H+ antiporter MnhB subunit-related pr [...]
Tlie_0478 protein networkhttps://string-db.org/network/580340.Tlie_0478PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: ton:TON_0493 putative monovalent cation/H+ antipo [...]
Tlie_0479 protein networkhttps://string-db.org/network/580340.Tlie_0479PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+ [...]
Tlie_0480 protein networkhttps://string-db.org/network/580340.Tlie_0480PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750: IPR003916; KEGG: hw [...]
Tlie_0481 protein networkhttps://string-db.org/network/580340.Tlie_0481Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator; InterPro IPR001123; KEGG: cli:Clim_1754 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Ly [...]
Tlie_0482 protein networkhttps://string-db.org/network/580340.Tlie_0482PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectan [...]
Tlie_0483 protein networkhttps://string-db.org/network/580340.Tlie_0483PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: yen:YE286 [...]
Tlie_0484 protein networkhttps://string-db.org/network/580340.Tlie_0484PFAM: ABC transporter; CBS domain; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003439: IPR000644: IPR003593: IPR017871; KEGG: tra:Trad_1572 gly [...]
Tlie_0485 protein networkhttps://string-db.org/network/580340.Tlie_0485PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: bmj:BMULJ [...]
Tlie_0486 protein networkhttps://string-db.org/network/580340.Tlie_0486PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: cbh:CLC_1475 alcohol dehydrogenase, iron-containing; PFAM: iron-containing alc [...]
Tlie_0487 protein networkhttps://string-db.org/network/580340.Tlie_0487PFAM: Bacterial regulatory protein, arsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fma:FMG_0053 ArsR family transcriptional regulator; PFAM: regulatory pr [...]
Tlie_0488 protein networkhttps://string-db.org/network/580340.Tlie_0488PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamil [...]
Tlie_0489 protein networkhttps://string-db.org/network/580340.Tlie_0489PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_0490 protein networkhttps://string-db.org/network/580340.Tlie_0490Transporter, NhaC family (TC 2.A.35); PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461: IPR004770; KEGG: tai:Taci_1400 Na+/H+ a [...]
Tlie_0491 protein networkhttps://string-db.org/network/580340.Tlie_0491PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: kko:Kkor_1137 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenas [...]
Tlie_0492 protein networkhttps://string-db.org/network/580340.Tlie_0492PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; COGs: COG1554 Trehalose and maltose [...]
Tlie_0493 protein networkhttps://string-db.org/network/580340.Tlie_0493Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
Tlie_0494 protein networkhttps://string-db.org/network/580340.Tlie_0494Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction hi [...]
Tlie_0495 protein networkhttps://string-db.org/network/580340.Tlie_0495Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like [...]
Tlie_0496 protein networkhttps://string-db.org/network/580340.Tlie_0496PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR018107; KEGG: aco:Amico_0277 sodium:dicarboxylate symporter; PFAM: sodium:dicarbo [...]
Tlie_0497 protein networkhttps://string-db.org/network/580340.Tlie_0497PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_0498 protein networkhttps://string-db.org/network/580340.Tlie_0498Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
Tlie_0499 protein networkhttps://string-db.org/network/580340.Tlie_0499PFAM: Protein of unknown function (DUF1847); COGs: COG4887 Uncharacterized metal-binding protein; InterPro IPR014997; KEGG: aco:Amico_0139 protein of unknown function DUF1847; PFAM: protein of un [...]
Tlie_0500 protein networkhttps://string-db.org/network/580340.Tlie_0500Alanine-glyoxylate aminotransferase apoenzyme; PFAM: Aminotransferase class-V; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192: IPR020578; KEGG: bts [...]
Tlie_0501 protein networkhttps://string-db.org/network/580340.Tlie_0501PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: aco:Amico_1764 protein of unknown function UPF0118; PFAM: protein of unknown function UPF0118; SPTR: Puta [...]
Tlie_0502 protein networkhttps://string-db.org/network/580340.Tlie_0502PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593: IPR017871; KEGG: sat:SYN_00466 ABC transporter ATP-binding [...]
Tlie_0503 protein networkhttps://string-db.org/network/580340.Tlie_0503PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: aco:Amico_0284 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase.
Tlie_0504 protein networkhttps://string-db.org/network/580340.Tlie_0504Phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: pmo:Pmob_0852 hypothetical protein; PFAM: phosphatidate cytidylyltransferase; SPTR: Putative uncharacterized protein.
Tlie_0505 protein networkhttps://string-db.org/network/580340.Tlie_0505Protein of unknown function DUF2229, CoA enzyme activase; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2 [...]
pepA protein networkhttps://string-db.org/network/580340.Tlie_0506Peptidase M17 leucyl aminopeptidase domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino [...]
Tlie_0507 protein networkhttps://string-db.org/network/580340.Tlie_0507Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866; KEGG: dol:Dole_2161 peroxiredoxin-like protein; PF [...]
Tlie_0508 protein networkhttps://string-db.org/network/580340.Tlie_0508Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR01947 [...]
Tlie_0509 protein networkhttps://string-db.org/network/580340.Tlie_0509KEGG: tte:TTE1894 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0510 protein networkhttps://string-db.org/network/580340.Tlie_0510PFAM: SIS domain; Helix-turn-helix domain, rpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281: IPR001347; KEGG: aco:Amico_1807 transcriptional regulator, RpiR family; PFAM: [...]
Tlie_0511 protein networkhttps://string-db.org/network/580340.Tlie_0511PFAM: Ornithine cyclodeaminase/mu-crystallin family; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: aco:Amico_1535 ornithine cyclodeaminase; PFAM: ornithi [...]
Tlie_0512 protein networkhttps://string-db.org/network/580340.Tlie_0512PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: tai:Taci_03 [...]
Tlie_0513 protein networkhttps://string-db.org/network/580340.Tlie_0513PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656: IPR011853 [...]
Tlie_0515 protein networkhttps://string-db.org/network/580340.Tlie_0515KEGG: rcu:RCOM_1618130 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0516 protein networkhttps://string-db.org/network/580340.Tlie_0516PFAM: CoA binding domain; COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: aco:Amico_1533 CoA-binding domain protein; PFAM: CoA-binding domain protein; SPTR: Putative coenzyme A bindi [...]
iscS protein networkhttps://string-db.org/network/580340.Tlie_0517Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of eleme [...]
Tlie_0518 protein networkhttps://string-db.org/network/580340.Tlie_0518PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; FeS cluster assembly scaffold protein NifU, Clostridium type; COGs: COG0822 NifU homolog involved in Fe-S [...]
Tlie_0519 protein networkhttps://string-db.org/network/580340.Tlie_0519PFAM: MOSC domain; COGs: COG2258 conserved hypothetical protein; InterPro IPR005302; KEGG: tai:Taci_0205 MOSC domain containing protein; PFAM: MOSC domain containing protein; SPTR: MOSC domain pr [...]
Tlie_0520 protein networkhttps://string-db.org/network/580340.Tlie_0520PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR006683: IPR006684; KEGG: aco:Amico_1532 thioesterase superfamily p [...]
Tlie_0521 protein networkhttps://string-db.org/network/580340.Tlie_0521Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
Tlie_0522 protein networkhttps://string-db.org/network/580340.Tlie_0522Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; COGs: COG1 [...]
Tlie_0523 protein networkhttps://string-db.org/network/580340.Tlie_0523Hypothetical protein; InterPro IPR012902; KEGG: aco:Amico_1529 hypothetical protein; SPTR: Putative prepilin-type N-cleavage/methylation domain protein.
Tlie_0524 protein networkhttps://string-db.org/network/580340.Tlie_0524PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0681 Signal peptidase I; InterProIPR019759: IPR000223: IPR019756: IPR019757: IPR 019758; KEGG: aco:Amico_1528 signa [...]
Tlie_0525 protein networkhttps://string-db.org/network/580340.Tlie_0525GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
rnhB protein networkhttps://string-db.org/network/580340.Tlie_0526RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
Tlie_0527 protein networkhttps://string-db.org/network/580340.Tlie_0527PFAM: Uncharacterised protein family UPF0102; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: aco:Amico_1525 protein of unknown function UPF [...]
Tlie_0528 protein networkhttps://string-db.org/network/580340.Tlie_0528PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR000523: IPR001208: IPR003593: IPR004482; KEGG: aco:Amico_ [...]
Tlie_0529 protein networkhttps://string-db.org/network/580340.Tlie_0529PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: tai:Taci [...]
Tlie_0530 protein networkhttps://string-db.org/network/580340.Tlie_0530Hypothetical protein; KEGG: bpi:BPLAN_323 carbamoyl-phosphate synthase large subunit; SPTR: Carbamoyl-phosphate synthase large subunit.
topA protein networkhttps://string-db.org/network/580340.Tlie_0531DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
trmFO protein networkhttps://string-db.org/network/580340.Tlie_0532Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
xerC protein networkhttps://string-db.org/network/580340.Tlie_0533Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert d [...]
Tlie_0534 protein networkhttps://string-db.org/network/580340.Tlie_053420S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
hslU protein networkhttps://string-db.org/network/580340.Tlie_0535Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by Hs [...]
codY protein networkhttps://string-db.org/network/580340.Tlie_0536GTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth [...]
Tlie_0537 protein networkhttps://string-db.org/network/580340.Tlie_0537PFAM: S1 RNA binding domain; COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain); InterPro IPR003029; KEGG: tai:Taci_1301 RNA binding S1 domain protein; PFAM: RNA binding S1 [...]
Tlie_0538 protein networkhttps://string-db.org/network/580340.Tlie_0538PFAM: Protein of unknown function (DUF501); COGs: COG1507 conserved hypothetical protein; InterPro IPR007511; KEGG: aco:Amico_1513 protein of unknown function DUF501; PFAM: protein of unknown fun [...]
Tlie_0539 protein networkhttps://string-db.org/network/580340.Tlie_0539PFAM: Ppx/GppA phosphatase family; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: hmo:HM1_0710 exopolyphosphatase ppx; PFAM: Ppx/GppA phosphatase; SPTR: Putative Ppx/GppA phosphatase [...]
argH protein networkhttps://string-db.org/network/580340.Tlie_0540PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; InterPro IPR000362: IPR009049: IPR020557: IPR003031; KEGG: aco:Amico_1512 argininosuccinate lyase; PFAM: fuma [...]
Tlie_0542 protein networkhttps://string-db.org/network/580340.Tlie_0542PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078: IPR001345; KEGG: aco:Amico_1510 phosphoglycerate mutase; [...]
Tlie_0543 protein networkhttps://string-db.org/network/580340.Tlie_0543RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1191 DNA-directed RNA polymerase specialized sigma [...]
Tlie_0544 protein networkhttps://string-db.org/network/580340.Tlie_0544KEGG: aco:Amico_1508 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0545 protein networkhttps://string-db.org/network/580340.Tlie_0545PFAM: Surface antigen variable number repeat; Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: aco:Amico_1507 surface antigen ( [...]
Tlie_0546 protein networkhttps://string-db.org/network/580340.Tlie_0546KEGG: aco:Amico_1506 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0547 protein networkhttps://string-db.org/network/580340.Tlie_0547UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG [...]
Tlie_0548 protein networkhttps://string-db.org/network/580340.Tlie_0548UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A bi [...]
fabZ protein networkhttps://string-db.org/network/580340.Tlie_05493-hydroxyacyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and uns [...]
Tlie_0550 protein networkhttps://string-db.org/network/580340.Tlie_0550acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
Tlie_0551 protein networkhttps://string-db.org/network/580340.Tlie_0551PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR00 [...]
Tlie_0552 protein networkhttps://string-db.org/network/580340.Tlie_0552PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: aco:Amico_1500 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Perme [...]
Tlie_0553 protein networkhttps://string-db.org/network/580340.Tlie_0553PFAM: Protein of unknown function (DUF1009); COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: tai:Taci_1287 protein of unknown function DUF1009; PFAM: protein of unknown fu [...]
Tlie_0554 protein networkhttps://string-db.org/network/580340.Tlie_0554lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
Tlie_0555 protein networkhttps://string-db.org/network/580340.Tlie_0555Hypothetical protein; PFAM: Lipid-A-disaccharide synthetase; COGs: COG0763 Lipid A disaccharide synthetase; KEGG: aco:Amico_1497 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0556 protein networkhttps://string-db.org/network/580340.Tlie_0556PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR001140: IPR003439: IPR017940: IPR003593: [...]
lpxK protein networkhttps://string-db.org/network/580340.Tlie_0557Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis [...]
kdsB protein networkhttps://string-db.org/network/580340.Tlie_05583-deoxy-D-manno- octulosonatecytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
kdsA protein networkhttps://string-db.org/network/580340.Tlie_05592-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2877 3-deoxy-D-mann [...]
Tlie_0560 protein networkhttps://string-db.org/network/580340.Tlie_0560KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347: IPR000644: IP [...]
Tlie_0561 protein networkhttps://string-db.org/network/580340.Tlie_0561Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue [...]
Tlie_0562 protein networkhttps://string-db.org/network/580340.Tlie_0562PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670: IPR018211; KEGG: tai:Taci_1279 iron-containing alcohol dehydrogenase; PFAM: iron-con [...]
Tlie_0563 protein networkhttps://string-db.org/network/580340.Tlie_0563Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biog [...]
Tlie_0564 protein networkhttps://string-db.org/network/580340.Tlie_0564PFAM: Protein of unknown function (DUF1022); COGs: COG3660 nucleoside-diphosphate-sugar epimerase; InterPro IPR009367; KEGG: aco:Amico_1489 protein of unknown function DUF1022; PFAM: protein of u [...]
Tlie_0565 protein networkhttps://string-db.org/network/580340.Tlie_0565PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: aco:Amico_1488 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative g [...]
Tlie_0566 protein networkhttps://string-db.org/network/580340.Tlie_0566PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: tai:Taci_1703 glycosyl transferase family 9; PFAM: glycosyl [...]
Tlie_0567 protein networkhttps://string-db.org/network/580340.Tlie_0567PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: gem:GM21_2231 glycosyl transferase family 9; PFAM: glycosyl [...]
Tlie_0568 protein networkhttps://string-db.org/network/580340.Tlie_0568PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: aco:Amico_1486 glycosyl transferase family 9; PFAM: glycosyl [...]
Tlie_0569 protein networkhttps://string-db.org/network/580340.Tlie_0569PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bcb:BCB4264_A5552 beta-1,3-N-acetylglucosaminyltransferase; PFAM [...]
Tlie_0570 protein networkhttps://string-db.org/network/580340.Tlie_0570PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: aco:Amico_1487 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltr [...]
Tlie_0571 protein networkhttps://string-db.org/network/580340.Tlie_0571PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: aco:Amico_1485 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase family protein.
Tlie_0572 protein networkhttps://string-db.org/network/580340.Tlie_0572S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: aco:Amico_1484 S-layer domain protein; PFAM: S-layer domain-containing protein; SPTR: S-layer domain pr [...]
Tlie_0573 protein networkhttps://string-db.org/network/580340.Tlie_0573S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: aco:Amico_1484 S-layer domain protein; PFAM: S-layer domain-containing protein; SPTR: S-layer protein.
Tlie_0574 protein networkhttps://string-db.org/network/580340.Tlie_0574KEGG: aco:Amico_1482 hypothetical protein; SPTR: Putative uncharacterized protein.
pfkA protein networkhttps://string-db.org/network/580340.Tlie_05756-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
Tlie_0576 protein networkhttps://string-db.org/network/580340.Tlie_0576KEGG: aco:Amico_1480 putative aspartate/glutamate/hydantoin racemase; SPTR: Putative aspartate/glutamate/hydantoin racemase.
Tlie_0577 protein networkhttps://string-db.org/network/580340.Tlie_0577PFAM: Protein of unknown function (DUF1393); COGs: COG4720 membrane protein; KEGG: aco:Amico_1479 protein of unknown function DUF1393; SPTR: Putative uncharacterized protein.
Tlie_0578 protein networkhttps://string-db.org/network/580340.Tlie_0578KEGG: aco:Amico_1478 hypothetical protein; SPTR: Putative uncharacterized protein.
tal protein networkhttps://string-db.org/network/580340.Tlie_0579Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
rho protein networkhttps://string-db.org/network/580340.Tlie_0580Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
Tlie_0581 protein networkhttps://string-db.org/network/580340.Tlie_0581PFAM: Peptidase family M23; LysM domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392: IPR016047: IPR002482; KEGG: aco:Amico_1475 peptidase M23; PFAM: Peptid [...]
pyrG protein networkhttps://string-db.org/network/580340.Tlie_0582CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
Tlie_0583 protein networkhttps://string-db.org/network/580340.Tlie_0583KEGG: aco:Amico_1473 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0584 protein networkhttps://string-db.org/network/580340.Tlie_0584KEGG: aco:Amico_1472 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0585 protein networkhttps://string-db.org/network/580340.Tlie_0585PFAM: Protein of unknown function (DUF1239); KEGG: aco:Amico_1471 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0586 protein networkhttps://string-db.org/network/580340.Tlie_0586PFAM: OstA-like protein; COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR005653; KEGG: aco:Amico_1470 OstA family protein; PFAM: OstA family protein; SPTR: OstA family protein.
ddl protein networkhttps://string-db.org/network/580340.Tlie_0587D-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
greA protein networkhttps://string-db.org/network/580340.Tlie_0588Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
Tlie_0589 protein networkhttps://string-db.org/network/580340.Tlie_0589L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
thrB protein networkhttps://string-db.org/network/580340.Tlie_0590Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
Tlie_0591 protein networkhttps://string-db.org/network/580340.Tlie_0591Aspartate kinase; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048: IPR002912: IPR001 [...]
asd protein networkhttps://string-db.org/network/580340.Tlie_0592Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
Tlie_0593 protein networkhttps://string-db.org/network/580340.Tlie_0593PFAM: OstA-like protein; InterPro IPR005653; KEGG: aco:Amico_0575 OstA family protein; PFAM: OstA family protein; SPTR: Putative signal peptide protein.
Tlie_0594 protein networkhttps://string-db.org/network/580340.Tlie_0594PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: aco:Amico_0576 ABC transporter related protein; PFA [...]
Tlie_0595 protein networkhttps://string-db.org/network/580340.Tlie_0595PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: aco:Amico_0577 hydrogenase maturation [...]
murJ protein networkhttps://string-db.org/network/580340.Tlie_0596Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
Tlie_0597 protein networkhttps://string-db.org/network/580340.Tlie_0597KEGG: aco:Amico_0579 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0598 protein networkhttps://string-db.org/network/580340.Tlie_0598KEGG: cac:CA_C3548 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
tsaD protein networkhttps://string-db.org/network/580340.Tlie_0599O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in t [...]
groS protein networkhttps://string-db.org/network/580340.Tlie_0600Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groL protein networkhttps://string-db.org/network/580340.Tlie_0601Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
guaA protein networkhttps://string-db.org/network/580340.Tlie_0602GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
Tlie_0603 protein networkhttps://string-db.org/network/580340.Tlie_0603PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: aco:Amico_0584 protein of unknown function UPF0118; PFAM: protein of unknown function UPF0118; SPTR: Puta [...]
Tlie_0604 protein networkhttps://string-db.org/network/580340.Tlie_0604PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis [...]
hppA protein networkhttps://string-db.org/network/580340.Tlie_0605V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-transl [...]
dnaG protein networkhttps://string-db.org/network/580340.Tlie_0606DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
sigA protein networkhttps://string-db.org/network/580340.Tlie_0607RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma [...]
Tlie_0608 protein networkhttps://string-db.org/network/580340.Tlie_0608PFAM: S4 domain; COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: tai:Taci_1221 RNA-binding S4 domain pr [...]
eno protein networkhttps://string-db.org/network/580340.Tlie_0609Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
rex protein networkhttps://string-db.org/network/580340.Tlie_0610CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
Tlie_0611 protein networkhttps://string-db.org/network/580340.Tlie_0611PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: aco:Amico_0591 preprotein translo [...]
secD protein networkhttps://string-db.org/network/580340.Tlie_0612Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
secF protein networkhttps://string-db.org/network/580340.Tlie_0613Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
Tlie_0614 protein networkhttps://string-db.org/network/580340.Tlie_0614PFAM: Radical SAM superfamily; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: aco:Amico_0594 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain p [...]
Tlie_0615 protein networkhttps://string-db.org/network/580340.Tlie_0615PFAM: Protein of unknown function (DUF1049); KEGG: aco:Amico_0595 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0616 protein networkhttps://string-db.org/network/580340.Tlie_0616Phosphoesterase RecJ domain protein; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR00 [...]
Tlie_0617 protein networkhttps://string-db.org/network/580340.Tlie_0617(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in respo [...]
dtd protein networkhttps://string-db.org/network/580340.Tlie_0618D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
Tlie_0619 protein networkhttps://string-db.org/network/580340.Tlie_0619Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tai:Taci_1211 beta-lactamase domain protein; SPTR: Beta-l [...]
Tlie_0620 protein networkhttps://string-db.org/network/580340.Tlie_0620PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753: IPR004000; KEGG: aco:Amico_06 [...]
Tlie_0621 protein networkhttps://string-db.org/network/580340.Tlie_0621PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: aco:Amico_0602 rod shape-determining [...]
Tlie_0622 protein networkhttps://string-db.org/network/580340.Tlie_0622PFAM: rod shape-determining protein MreD; KEGG: aco:Amico_0603 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0623 protein networkhttps://string-db.org/network/580340.Tlie_0623Penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell div [...]
minC protein networkhttps://string-db.org/network/580340.Tlie_0624Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments tha [...]
Tlie_0625 protein networkhttps://string-db.org/network/580340.Tlie_0625PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD; COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR010223; KEGG: aco:Amico [...]
minE protein networkhttps://string-db.org/network/580340.Tlie_0626Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensu [...]
Tlie_0627 protein networkhttps://string-db.org/network/580340.Tlie_0627PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR011923; KEGG: aco:Amico_0608 rod shape-determ [...]
Tlie_0628 protein networkhttps://string-db.org/network/580340.Tlie_0628PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197: IPR006638; KEGG: aco:Amico_0609 radical SAM domain prote [...]
Tlie_0629 protein networkhttps://string-db.org/network/580340.Tlie_0629Protein of unknown function DUF2344; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein; COGs: COG5011 conserved hypothetical protein; InterPro IPR [...]
Tlie_0630 protein networkhttps://string-db.org/network/580340.Tlie_0630Ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR018247: IPR003029: IPR01 [...]
smc protein networkhttps://string-db.org/network/580340.Tlie_0631Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
Tlie_0632 protein networkhttps://string-db.org/network/580340.Tlie_0632RNA methylase; PFAM: Methyltransferase small domain; COGs: COG4123 O-methyltransferase; InterPro IPR002052: IPR000241; KEGG: aco:Amico_0613 methyltransferase small; PFAM: RNA methylase; SPTR: Put [...]
rsmI protein networkhttps://string-db.org/network/580340.Tlie_0633Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
metG protein networkhttps://string-db.org/network/580340.Tlie_0634methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
Tlie_0635 protein networkhttps://string-db.org/network/580340.Tlie_0635Hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR012278: IPR018228: IPR001130: IPR015991; KEGG: aco:Amico_0616 hydr [...]
tgt protein networkhttps://string-db.org/network/580340.Tlie_0636tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in t [...]
Tlie_0637 protein networkhttps://string-db.org/network/580340.Tlie_0637Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
rpoB protein networkhttps://string-db.org/network/580340.Tlie_0638DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoC protein networkhttps://string-db.org/network/580340.Tlie_0639DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
Tlie_0640 protein networkhttps://string-db.org/network/580340.Tlie_0640PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; KEGG: tai:Taci_1190 ribosomal protein L7AE family protein; SPTR: Ribosomal protein L7AE family protein.
rpsL protein networkhttps://string-db.org/network/580340.Tlie_0641Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50 [...]
rpsG protein networkhttps://string-db.org/network/580340.Tlie_0642Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...]
fusA protein networkhttps://string-db.org/network/580340.Tlie_0643Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocat [...]
tuf-2 protein networkhttps://string-db.org/network/580340.Tlie_0644Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpsJ protein networkhttps://string-db.org/network/580340.Tlie_0645SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
rplC protein networkhttps://string-db.org/network/580340.Tlie_0646LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ri [...]
rplD protein networkhttps://string-db.org/network/580340.Tlie_0647LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
rplW protein networkhttps://string-db.org/network/580340.Tlie_0648LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main doc [...]
rplB protein networkhttps://string-db.org/network/580340.Tlie_0649Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...]
rpsS protein networkhttps://string-db.org/network/580340.Tlie_0650SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/580340.Tlie_0651Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of [...]
rpsC protein networkhttps://string-db.org/network/580340.Tlie_0652SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplP protein networkhttps://string-db.org/network/580340.Tlie_0653LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpmC protein networkhttps://string-db.org/network/580340.Tlie_0654PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR018254: IPR001854; KEGG: tai:Taci_1176 ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Ribosomal protein L29; TI [...]
rpsQ protein networkhttps://string-db.org/network/580340.Tlie_065530S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplN protein networkhttps://string-db.org/network/580340.Tlie_0656LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rplX protein networkhttps://string-db.org/network/580340.Tlie_0657Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplE protein networkhttps://string-db.org/network/580340.Tlie_0658LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberanc [...]
rpsZ protein networkhttps://string-db.org/network/580340.Tlie_0659SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
rpsH protein networkhttps://string-db.org/network/580340.Tlie_0660SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rplF protein networkhttps://string-db.org/network/580340.Tlie_0661Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...]
rplR protein networkhttps://string-db.org/network/580340.Tlie_0662LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuber [...]
rpsE protein networkhttps://string-db.org/network/580340.Tlie_0663Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
Tlie_0664 protein networkhttps://string-db.org/network/580340.Tlie_0664PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996: IPR018038: IPR000517; KEGG: tai:Taci_1166 ribos [...]
rplO protein networkhttps://string-db.org/network/580340.Tlie_0665LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/580340.Tlie_0666Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral [...]
adk protein networkhttps://string-db.org/network/580340.Tlie_0667Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
map protein networkhttps://string-db.org/network/580340.Tlie_0668Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
Tlie_0669 protein networkhttps://string-db.org/network/580340.Tlie_0669LSU ribosomal protein L14E; KEGG: tai:Taci_1161 hypothetical protein; SPTR: Putative uncharacterized protein.
infA protein networkhttps://string-db.org/network/580340.Tlie_0670Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-f [...]
rpmJ protein networkhttps://string-db.org/network/580340.Tlie_0671PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; InterPro IPR000473; KEGG: aco:Amico_0652 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal prote [...]
rpsM protein networkhttps://string-db.org/network/580340.Tlie_0672SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L [...]
rpsK protein networkhttps://string-db.org/network/580340.Tlie_067330S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsD protein networkhttps://string-db.org/network/580340.Tlie_0674SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpoA protein networkhttps://string-db.org/network/580340.Tlie_0675DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/580340.Tlie_0676PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: aco:Amico_0657 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR [...]
Tlie_0677 protein networkhttps://string-db.org/network/580340.Tlie_0677PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR [...]
ecfA protein networkhttps://string-db.org/network/580340.Tlie_0678Cobalt ABC transporter, ATPase subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides t [...]
Tlie_0679 protein networkhttps://string-db.org/network/580340.Tlie_0679PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: aco:Amico_0660 cobalt transport protein; [...]
truA protein networkhttps://string-db.org/network/580340.Tlie_0680tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
Tlie_0681 protein networkhttps://string-db.org/network/580340.Tlie_0681PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: tai:Taci_1149 cell shap [...]
Tlie_0682 protein networkhttps://string-db.org/network/580340.Tlie_0682Protein of unknown function UPF0153; PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: tai:Taci_1142 protein of unknown function UPF0153; PFAM: protein of unknown function [...]
Tlie_0683 protein networkhttps://string-db.org/network/580340.Tlie_0683PFAM: Aminotransferase class-III; TIGRFAM: L-lysine 6-transaminase; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814: IPR017657; KEGG: tai:Taci_1141 [...]
Tlie_0684 protein networkhttps://string-db.org/network/580340.Tlie_0684PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: aco:Amico_0665 uncharacterized protein with the myosin-like protein domain; S [...]
Tlie_0685 protein networkhttps://string-db.org/network/580340.Tlie_0685KEGG: aco:Amico_0666 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0686 protein networkhttps://string-db.org/network/580340.Tlie_0686GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: aco:Amico_0667 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: G [...]
metK protein networkhttps://string-db.org/network/580340.Tlie_0687Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet format [...]
Tlie_0688 protein networkhttps://string-db.org/network/580340.Tlie_0688Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: tai:Taci_0661 phosphoribosyltransferase; PFAM: phosphor [...]
Tlie_0689 protein networkhttps://string-db.org/network/580340.Tlie_0689PFAM: Protein of unknown function (DUF3343); KEGG: tai:Taci_0681 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0690 protein networkhttps://string-db.org/network/580340.Tlie_0690Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: tai:Taci_0682 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (Omp [...]
Tlie_0691 protein networkhttps://string-db.org/network/580340.Tlie_0691Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871 [...]
Tlie_0692 protein networkhttps://string-db.org/network/580340.Tlie_0692PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439: IPR0035 [...]
Tlie_0693 protein networkhttps://string-db.org/network/580340.Tlie_0693Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport [...]
Tlie_0694 protein networkhttps://string-db.org/network/580340.Tlie_0694Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport [...]
Tlie_0695 protein networkhttps://string-db.org/network/580340.Tlie_0695Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmi [...]
Tlie_0696 protein networkhttps://string-db.org/network/580340.Tlie_0696PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the [...]
Tlie_0697 protein networkhttps://string-db.org/network/580340.Tlie_0697Protein of unknown function DUF355; PFAM: Adenosine specific kinase; COGs: COG1839 conserved hypothetical protein; InterPro IPR007153; KEGG: tai:Taci_0687 protein of unknown function DUF355; PFAM [...]
Tlie_0698 protein networkhttps://string-db.org/network/580340.Tlie_0698PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: aco:Amico_0718 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; B [...]
radA protein networkhttps://string-db.org/network/580340.Tlie_0699DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
Tlie_0700 protein networkhttps://string-db.org/network/580340.Tlie_0700Protein of unknown function DUF107; PFAM: Clp protease; NfeD-like; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: aco:Amico_0686 protein of unknown function [...]
Tlie_0701 protein networkhttps://string-db.org/network/580340.Tlie_0701PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR018080: IPR001107: IPR001972; KEGG: tai:Taci_0697 band 7 protein; PFAM: band [...]
leuS protein networkhttps://string-db.org/network/580340.Tlie_0702PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR [...]
Tlie_0703 protein networkhttps://string-db.org/network/580340.Tlie_0703TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: aco:Amico_0689 DNA polymerase III delta; PFAM: DNA polymerase III delta; SPTR [...]
rpsT protein networkhttps://string-db.org/network/580340.Tlie_0704Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
Tlie_0705 protein networkhttps://string-db.org/network/580340.Tlie_0705COGs: COG2339 membrane protein; KEGG: bbe:BBR47_24360 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
Tlie_0706 protein networkhttps://string-db.org/network/580340.Tlie_0706PFAM: DEAD/DEAH box helicase; COGs: COG1199 Rad3-related DNA helicase; InterProIPR014013: IPR001650: IPR011545: IPR014001: IPR 006554: IPR006555; KEGG: aco:Amico_0691 helicase C2; PFAM: DEAD/DEAH [...]
Tlie_0707 protein networkhttps://string-db.org/network/580340.Tlie_0707Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
Tlie_0708 protein networkhttps://string-db.org/network/580340.Tlie_0708Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0482 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
rpmH protein networkhttps://string-db.org/network/580340.Tlie_0709PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; InterPro IPR000271: IPR020939; KEGG: csc:Csac_2776 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S r [...]
rnpA protein networkhttps://string-db.org/network/580340.Tlie_0710Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
Tlie_0711 protein networkhttps://string-db.org/network/580340.Tlie_0711Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
Tlie_0712 protein networkhttps://string-db.org/network/580340.Tlie_0712PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708: IPR020001; KEGG [...]
Tlie_0713 protein networkhttps://string-db.org/network/580340.Tlie_0713PFAM: R3H domain; COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: aco:Amico_0695 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R [...]
Tlie_0714 protein networkhttps://string-db.org/network/580340.Tlie_0714DNA-3-methyladenine glycosylase III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; COGs: COG2231 Uncharacterized protein related to Endonuclease III; Inte [...]
Tlie_0715 protein networkhttps://string-db.org/network/580340.Tlie_0715Protein of unknown function DUF62; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: mka:MK0807 hypothetical pro [...]
Tlie_0716 protein networkhttps://string-db.org/network/580340.Tlie_0716PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PD [...]
Tlie_0719 protein networkhttps://string-db.org/network/580340.Tlie_0719Transposase mutator type; Required for the transposition of the insertion element.
Tlie_0720 protein networkhttps://string-db.org/network/580340.Tlie_0720Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduct [...]
Tlie_0721 protein networkhttps://string-db.org/network/580340.Tlie_0721Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consistin [...]
rpsO protein networkhttps://string-db.org/network/580340.Tlie_0722SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
pnp protein networkhttps://string-db.org/network/580340.Tlie_0723Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
dut protein networkhttps://string-db.org/network/580340.Tlie_0724Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the int [...]
Tlie_0725 protein networkhttps://string-db.org/network/580340.Tlie_0725KEGG: tai:Taci_0721 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0726 protein networkhttps://string-db.org/network/580340.Tlie_0726PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: tai:Taci_0722 sodium:neurotransmitter symporter; PFAM: sodium: [...]
thrS protein networkhttps://string-db.org/network/580340.Tlie_0727Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S a [...]
infC protein networkhttps://string-db.org/network/580340.Tlie_0728Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
rpmI protein networkhttps://string-db.org/network/580340.Tlie_0729PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; InterPro IPR001706: IPR018265: IPR021137; KEGG: tai:Taci_0725 ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal [...]
rplT protein networkhttps://string-db.org/network/580340.Tlie_0730LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing fun [...]
Tlie_0731 protein networkhttps://string-db.org/network/580340.Tlie_0731H(+)-transporting two-sector ATPase; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR0 [...]
Tlie_0732 protein networkhttps://string-db.org/network/580340.Tlie_0732PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: aco:Amico_0708 TrkA-N domain protein; PFAM: TrkA-N domain protei [...]
pheS protein networkhttps://string-db.org/network/580340.Tlie_0733phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha s [...]
pheT protein networkhttps://string-db.org/network/580340.Tlie_0734phenylalanyl-tRNA synthetase beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthet [...]
Tlie_0735 protein networkhttps://string-db.org/network/580340.Tlie_0735Hypothetical protein; KEGG: pfa:PF11_0207 conserved Plasmodium protein; SPTR: Putative uncharacterized protein.
Tlie_0736 protein networkhttps://string-db.org/network/580340.Tlie_0736KEGG: aco:Amico_0712 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0737 protein networkhttps://string-db.org/network/580340.Tlie_0737PFAM: Colicin V production protein; COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: aco:Amico_0713 colicin V production protein; PFAM: Colicin V produc [...]
mutS2 protein networkhttps://string-db.org/network/580340.Tlie_0738MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the [...]
Tlie_0739 protein networkhttps://string-db.org/network/580340.Tlie_0739Hypothetical protein; PFAM: Asp/Glu/Hydantoin racemase; KEGG: ara:Arad_7064 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0740 protein networkhttps://string-db.org/network/580340.Tlie_0740PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR012156: IPR019844: IPR002059: IPR011129; KEGG: aco:Amico_0349 cold-shock DNA-binding domain protein; PFAM: Col [...]
Tlie_0741 protein networkhttps://string-db.org/network/580340.Tlie_0741PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: aco:Amico_0 [...]
Tlie_0742 protein networkhttps://string-db.org/network/580340.Tlie_0742HutP family protein; PFAM: HutP; InterPro IPR015111; KEGG: aco:Amico_0721 HutP family protein; PFAM: HutP family protein; SPTR: HutP family protein.
rpmE protein networkhttps://string-db.org/network/580340.Tlie_0743LSU ribosomal protein L31P; Binds the 23S rRNA.
thyX protein networkhttps://string-db.org/network/580340.Tlie_0744Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofo [...]
Tlie_0745 protein networkhttps://string-db.org/network/580340.Tlie_0745PFAM: Protein of unknown function (DUF1385); COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: aco:Amico_0724 protein of unknown function DUF1385; PFAM: protein of unknown function [...]
prfA protein networkhttps://string-db.org/network/580340.Tlie_0746Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
prmC protein networkhttps://string-db.org/network/580340.Tlie_0747protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally [...]
Tlie_0748 protein networkhttps://string-db.org/network/580340.Tlie_0748Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR008255: IPR013027: IPR005982 [...]
Tlie_0749 protein networkhttps://string-db.org/network/580340.Tlie_07491-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kina [...]
Tlie_0750 protein networkhttps://string-db.org/network/580340.Tlie_0750PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: tte:TTE0146 ribose 5-phosphate isomerase RpiB; PFAM: Protein- [...]
Tlie_0751 protein networkhttps://string-db.org/network/580340.Tlie_0751PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: tai:Taci_0829 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Pept [...]
dnaX protein networkhttps://string-db.org/network/580340.Tlie_0752DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' [...]
Tlie_0753 protein networkhttps://string-db.org/network/580340.Tlie_0753PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; [...]
Tlie_0754 protein networkhttps://string-db.org/network/580340.Tlie_0754PFAM: Tryptophan RNA-binding attenuator protein; InterPro IPR000824; KEGG: tai:Taci_0832 tryptophan RNA-binding attenuator protein; PFAM: tryptophan RNA-binding attenuator protein; SPTR: Tryptoph [...]
Tlie_0755 protein networkhttps://string-db.org/network/580340.Tlie_0755PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterProIPR018209: IPR01579 [...]
Tlie_0756 protein networkhttps://string-db.org/network/580340.Tlie_0756PFAM: NUDIX domain; InterPro IPR000086; KEGG: aco:Amico_0734 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase.
nfo protein networkhttps://string-db.org/network/580340.Tlie_0757Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-p [...]
Tlie_0758 protein networkhttps://string-db.org/network/580340.Tlie_0758PFAM: Alanine racemase, N-terminal domain; COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: aco:Amico_0736 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR [...]
dacA protein networkhttps://string-db.org/network/580340.Tlie_0759Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
Tlie_0760 protein networkhttps://string-db.org/network/580340.Tlie_0760PFAM: YbbR-like protein; COGs: COG4856 conserved hypothetical protein; InterPro IPR012505; KEGG: aco:Amico_0738 YbbR family protein; PFAM: YbbR family protein; SPTR: YbbR family protein.
glmM protein networkhttps://string-db.org/network/580340.Tlie_0761Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
Tlie_0762 protein networkhttps://string-db.org/network/580340.Tlie_0762UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005771; KEG [...]
glmS protein networkhttps://string-db.org/network/580340.Tlie_0763Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
Tlie_0764 protein networkhttps://string-db.org/network/580340.Tlie_0764PFAM: Protein of unknown function (DUF2703); KEGG: chy:CHY_1710 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0765 protein networkhttps://string-db.org/network/580340.Tlie_0765KEGG: tai:Taci_0842 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0766 protein networkhttps://string-db.org/network/580340.Tlie_0766Hypothetical protein; KEGG: lbf:LBF_2546 methyl-accepting chemotaxis protein; SPTR: Putative methyl-accepting chemotaxis protein (MCP); putative membrane protein.
glmU protein networkhttps://string-db.org/network/580340.Tlie_0767UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyz [...]
prs protein networkhttps://string-db.org/network/580340.Tlie_0768Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
rplY protein networkhttps://string-db.org/network/580340.Tlie_0769LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 f [...]
pth protein networkhttps://string-db.org/network/580340.Tlie_0770peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
mfd protein networkhttps://string-db.org/network/580340.Tlie_0771DEAD/DEAH box helicase domain protein; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated t [...]
Tlie_0772 protein networkhttps://string-db.org/network/580340.Tlie_0772MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predict [...]
Tlie_0773 protein networkhttps://string-db.org/network/580340.Tlie_0773PFAM: HMGL-like; Conserved carboxylase domain; COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891: IPR003379; KEGG: aco:Amico_0751 conserved carboxylase region; PFAM: Con [...]
Tlie_0774 protein networkhttps://string-db.org/network/580340.Tlie_0774PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: tai:Taci_1070 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; [...]
Tlie_0775 protein networkhttps://string-db.org/network/580340.Tlie_0775PFAM: PhoH-like protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: aco:Amico_0752 PhoH family protein; PFAM: PhoH family protein; SPTR: [...]
Tlie_0776 protein networkhttps://string-db.org/network/580340.Tlie_07767TM receptor with intracellular metal dependent phosphohydrolase; PFAM: 7TM-HD extracellular; HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG1480 membrane-associated HD superfamily hyd [...]
ybeY protein networkhttps://string-db.org/network/580340.Tlie_0777Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
Tlie_0778 protein networkhttps://string-db.org/network/580340.Tlie_0778PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; K [...]
Tlie_0779 protein networkhttps://string-db.org/network/580340.Tlie_0779Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
era protein networkhttps://string-db.org/network/580340.Tlie_0780GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
Tlie_0781 protein networkhttps://string-db.org/network/580340.Tlie_0781DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
glyQ protein networkhttps://string-db.org/network/580340.Tlie_0782PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310: IPR006194; KEG [...]
glyS protein networkhttps://string-db.org/network/580340.Tlie_0783PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterP [...]
Tlie_0784 protein networkhttps://string-db.org/network/580340.Tlie_0784Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/ [...]
Tlie_0785 protein networkhttps://string-db.org/network/580340.Tlie_0785Pyruvate phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosp [...]
Tlie_0786 protein networkhttps://string-db.org/network/580340.Tlie_0786PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674: IPR006261: IPR003607; KEGG: tai:Taci_1057 deoxyguan [...]
Tlie_0787 protein networkhttps://string-db.org/network/580340.Tlie_0787Penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypept [...]
Tlie_0788 protein networkhttps://string-db.org/network/580340.Tlie_0788Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
Tlie_0789 protein networkhttps://string-db.org/network/580340.Tlie_0789Silent information regulator protein Sir2; PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: aco:Amico_0395 silent information regulator pr [...]
Tlie_0790 protein networkhttps://string-db.org/network/580340.Tlie_0790PFAM: Permease family; TIGRFAM: uracil-xanthine permease; COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042: IPR006043; KEGG: aco:Amico_0396 xanthine/uracil/vitamin C permease; PFAM: Xan [...]
Tlie_0791 protein networkhttps://string-db.org/network/580340.Tlie_0791PFAM: Flavin reductase like domain; COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: tai:Taci_1579 flavin reduct [...]
Tlie_0792 protein networkhttps://string-db.org/network/580340.Tlie_0792Conserved hypothetical protein CHP02757; PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: aco:Amico_0403 hypothetical protein; PFAM: Conse [...]
Tlie_0793 protein networkhttps://string-db.org/network/580340.Tlie_0793KEGG: tai:Taci_1571 hypothetical protein; SPTR: Putative uncharacterized protein.
mntP protein networkhttps://string-db.org/network/580340.Tlie_0794Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
Tlie_0795 protein networkhttps://string-db.org/network/580340.Tlie_0795PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016473: IPR016192: IPR002125; KEGG: aco:Amico_0406 CMP/dCMP deaminase zinc-b [...]
Tlie_0796 protein networkhttps://string-db.org/network/580340.Tlie_0796AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); InterProIPR019734: IPR013026: IPR003959: IPR001440: IPR 000641: IPR003593; KEGG: nth:Nthe [...]
Tlie_0797 protein networkhttps://string-db.org/network/580340.Tlie_0797Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006674: IPR006675; KEGG: aco:Amico_0407 metal depend [...]
Tlie_0798 protein networkhttps://string-db.org/network/580340.Tlie_0798Putative PAS/PAC sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2206 HD-GYP domain; InterProIPR000014: IPR000700: IPR013656: IPR006674: IPR 003607; KEGG: slt:Slit_ [...]
Tlie_0799 protein networkhttps://string-db.org/network/580340.Tlie_0799KEGG: dhd:Dhaf_3079 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0800 protein networkhttps://string-db.org/network/580340.Tlie_0800PFAM: Peptidase family S58; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321; KEGG: tte:TTE1796 L-aminopeptidase/D-esterase; PFAM: peptidase S58 DmpA; SPTR: L-aminopeptidase/D-estera [...]
Tlie_0801 protein networkhttps://string-db.org/network/580340.Tlie_0801Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like [...]
Tlie_0802 protein networkhttps://string-db.org/network/580340.Tlie_0802PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR018486: IPR011712: IPR003594; KEGG: aco:Amico_0409 [...]
Tlie_0803 protein networkhttps://string-db.org/network/580340.Tlie_0803COGs: COG4843 conserved hypothetical protein; KEGG: aco:Amico_0082 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0804 protein networkhttps://string-db.org/network/580340.Tlie_0804PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR0 [...]
Tlie_0805 protein networkhttps://string-db.org/network/580340.Tlie_0805PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aco:Amico_0486 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer [...]
Tlie_0806 protein networkhttps://string-db.org/network/580340.Tlie_0806TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: aco:Amico_0351 efflux transporter, RND family, MFP subunit; SPTR: Efflux tran [...]
Tlie_0807 protein networkhttps://string-db.org/network/580340.Tlie_0807Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump [...]
Tlie_0808 protein networkhttps://string-db.org/network/580340.Tlie_0808KEGG: aco:Amico_0411 hypothetical protein; SPTR: Putative uncharacterized protein.
tyrS protein networkhttps://string-db.org/network/580340.Tlie_0809tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
Tlie_0810 protein networkhttps://string-db.org/network/580340.Tlie_0810PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: aco:Amico_0413 lipid A biosynthesis acyltransferase; PFAM: lipid A [...]
Tlie_0811 protein networkhttps://string-db.org/network/580340.Tlie_0811PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; InterPro IPR010916: IPR004370: IPR018191; KEGG: aco:Amico_1236 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-o [...]
mnmE protein networkhttps://string-db.org/network/580340.Tlie_0812tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
Tlie_0813 protein networkhttps://string-db.org/network/580340.Tlie_0813Putative transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain [...]
Tlie_0814 protein networkhttps://string-db.org/network/580340.Tlie_0814PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: aco:Amico_0365 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase [...]
Tlie_0815 protein networkhttps://string-db.org/network/580340.Tlie_0815PFAM: Aminotransferase class-V; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: tai:Taci_0909 aminotransferase class V; PFAM: aminotransferas [...]
Tlie_0816 protein networkhttps://string-db.org/network/580340.Tlie_0816PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; [...]
Tlie_0817 protein networkhttps://string-db.org/network/580340.Tlie_0817PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tai:Taci_0911 phosphoglycerate mutase; PFAM: Phosph [...]
Tlie_0818 protein networkhttps://string-db.org/network/580340.Tlie_0818PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; COGs: COG3635 ph [...]
Tlie_0819 protein networkhttps://string-db.org/network/580340.Tlie_0819Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG3481 HD-superfamily hydrolase; InterPro IPR006674: IPR006675: IPR003607; KEGG: aco:Amico_0370 met [...]
Tlie_0820 protein networkhttps://string-db.org/network/580340.Tlie_0820Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
Tlie_0821 protein networkhttps://string-db.org/network/580340.Tlie_0821Hypothetical protein.
Tlie_0822 protein networkhttps://string-db.org/network/580340.Tlie_0822PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR014362: IP [...]
Tlie_0823 protein networkhttps://string-db.org/network/580340.Tlie_0823Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017439 [...]
Tlie_0824 protein networkhttps://string-db.org/network/580340.Tlie_0824AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: aco:Amico_0376 AMP-dependen [...]
Tlie_0825 protein networkhttps://string-db.org/network/580340.Tlie_0825PfkB domain protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPr [...]
Tlie_0826 protein networkhttps://string-db.org/network/580340.Tlie_0826Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
Tlie_0827 protein networkhttps://string-db.org/network/580340.Tlie_0827Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: pca:Pcar_0430 acyl-CoA thioesterase I; P [...]
Tlie_0828 protein networkhttps://string-db.org/network/580340.Tlie_0828Haloacid dehalogenase domain protein hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; InterPro IPR005834; KEGG: aco:Ami [...]
hisI protein networkhttps://string-db.org/network/580340.Tlie_0829PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR00 [...]
hisF protein networkhttps://string-db.org/network/580340.Tlie_0830Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that prod [...]
hisA protein networkhttps://string-db.org/network/580340.Tlie_08311-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carbox [...]
hisH protein networkhttps://string-db.org/network/580340.Tlie_0832Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydroly [...]
hisB protein networkhttps://string-db.org/network/580340.Tlie_0833PFAM: Imidazoleglycerol-phosphate dehydratase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: aco:Amico_0681 imidazoleglycerol-phosphate dehydratase; [...]
hisG protein networkhttps://string-db.org/network/580340.Tlie_0834ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...]
Tlie_0835 protein networkhttps://string-db.org/network/580340.Tlie_0835histidyl-tRNA synthetase 2; COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; InterPro IPR004516; KEGG: aco:Amico_0683 histidyl-tRNA synthetase 2; SPTR: Histidyl-tRN [...]
hisD protein networkhttps://string-db.org/network/580340.Tlie_0836Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
Tlie_0837 protein networkhttps://string-db.org/network/580340.Tlie_0837PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR001 [...]
Tlie_0838 protein networkhttps://string-db.org/network/580340.Tlie_0838PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (Moc [...]
Tlie_0839 protein networkhttps://string-db.org/network/580340.Tlie_0839holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; COGs: COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthet [...]
Tlie_0840 protein networkhttps://string-db.org/network/580340.Tlie_0840KEGG: aco:Amico_0381 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0841 protein networkhttps://string-db.org/network/580340.Tlie_0841PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: aco:Amico_0382 transcriptional regulator, GntR family; [...]
Tlie_0842 protein networkhttps://string-db.org/network/580340.Tlie_0842PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: tai:Tac [...]
Tlie_0843 protein networkhttps://string-db.org/network/580340.Tlie_0843PFAM: Putative neutral zinc metallopeptidase; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: aco:Amico_0384 peptidase membrane zinc metallopeptidase putative; PFAM: peptidase memb [...]
Tlie_0844 protein networkhttps://string-db.org/network/580340.Tlie_0844KEGG: aco:Amico_0385 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0845 protein networkhttps://string-db.org/network/580340.Tlie_0845Fmu (Sun) domain protein; PFAM: NOL1/NOP2/sun family; NusB family; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: aco:Amico_0386 Fmu (Sun) domain protein; PFAM: Fmu [...]
Tlie_0846 protein networkhttps://string-db.org/network/580340.Tlie_0846PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: aco:Amico_0387 PASTA domain containing protein; PFAM: PASTA domain containing protein; SMART: PASTA dom [...]
Tlie_0847 protein networkhttps://string-db.org/network/580340.Tlie_0847PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: aco:Amico_0388 ribulose-phosphate 3- [...]
Tlie_0848 protein networkhttps://string-db.org/network/580340.Tlie_0848COGs: COG1426 conserved hypothetical protein; KEGG: tai:Taci_1663 hypothetical protein; SPTR: Putative uncharacterized protein.
rimO protein networkhttps://string-db.org/network/580340.Tlie_0849SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
Tlie_0850 protein networkhttps://string-db.org/network/580340.Tlie_0850PFAM: Phosphatidylglycerophosphatase A; COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: aco:Amico_0391 phosphatidylglycerophosphatase A; PFAM: phosph [...]
Tlie_0851 protein networkhttps://string-db.org/network/580340.Tlie_0851Competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/ [...]
Tlie_0852 protein networkhttps://string-db.org/network/580340.Tlie_08522'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
recA protein networkhttps://string-db.org/network/580340.Tlie_0853RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
Tlie_0854 protein networkhttps://string-db.org/network/580340.Tlie_0854General secretory pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; COGs [...]
Tlie_0855 protein networkhttps://string-db.org/network/580340.Tlie_0855Pilus retraction ATPase PilT; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IP [...]
Tlie_0856 protein networkhttps://string-db.org/network/580340.Tlie_0856PFAM: Bacterial type II secretion system protein F domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992: IPR018076: IPR003004; KEGG: tai:Taci_1053 type II secretion [...]
Tlie_0857 protein networkhttps://string-db.org/network/580340.Tlie_0857Hypothetical protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR001120: IPR012902: IPR000983; KEGG: tai:Taci_1052 [...]
Tlie_0858 protein networkhttps://string-db.org/network/580340.Tlie_0858PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; COGs: COG4972 Tfp pilus assembly protein ATPase PilM; KEGG: tai:Taci_1047 Tfp pilus assembly protein ATPase PilM-like pro [...]
Tlie_0859 protein networkhttps://string-db.org/network/580340.Tlie_0859PFAM: Fimbrial assembly protein (PilN); InterPro IPR007813; KEGG: tai:Taci_1046 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Putative uncharacterized protein.
Tlie_0860 protein networkhttps://string-db.org/network/580340.Tlie_0860KEGG: hor:Hore_06070 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0861 protein networkhttps://string-db.org/network/580340.Tlie_0861KEGG: tai:Taci_1044 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0862 protein networkhttps://string-db.org/network/580340.Tlie_0862PFAM: Bacterial type II and III secretion system protein; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR011662: IPR005644: IPR004846: IPR001775; KEGG: tai:Taci_1043 type II [...]
efp protein networkhttps://string-db.org/network/580340.Tlie_0863Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably [...]
Tlie_0864 protein networkhttps://string-db.org/network/580340.Tlie_0864KEGG: aco:Amico_1037 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0865 protein networkhttps://string-db.org/network/580340.Tlie_0865PFAM: Protein of unknown function (DUF322); COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: tai:Taci_1040 protein of unknown function DUF322; PFAM: protein of unknown func [...]
Tlie_0866 protein networkhttps://string-db.org/network/580340.Tlie_0866KEGG: aco:Amico_1035 hypothetical protein; SPTR: Putative uncharacterized protein.
nusB protein networkhttps://string-db.org/network/580340.Tlie_0867NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the rib [...]
xseA protein networkhttps://string-db.org/network/580340.Tlie_0868Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...]
mtnA protein networkhttps://string-db.org/network/580340.Tlie_0869Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
Tlie_0870 protein networkhttps://string-db.org/network/580340.Tlie_0870Adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0499 S-adenosylhomocysteine h [...]
mtaD protein networkhttps://string-db.org/network/580340.Tlie_0871Amidohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate ad [...]
alaS protein networkhttps://string-db.org/network/580340.Tlie_0872alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
Tlie_0873 protein networkhttps://string-db.org/network/580340.Tlie_0873Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
mutS protein networkhttps://string-db.org/network/580340.Tlie_0874DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
mutL protein networkhttps://string-db.org/network/580340.Tlie_0875DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
miaA protein networkhttps://string-db.org/network/580340.Tlie_0876tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
ispH protein networkhttps://string-db.org/network/580340.Tlie_08774-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
Tlie_0878 protein networkhttps://string-db.org/network/580340.Tlie_0878SSU ribosomal protein S1P; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: aco:Amico_1023 RNA binding S1 domai [...]
def protein networkhttps://string-db.org/network/580340.Tlie_0879Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
fmt protein networkhttps://string-db.org/network/580340.Tlie_0880methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
Tlie_0881 protein networkhttps://string-db.org/network/580340.Tlie_0881KEGG: aco:Amico_1020 putative ATP/GTP-binding protein; SPTR: Putative ATP/GTP-binding protein; manually curated.
Tlie_0882 protein networkhttps://string-db.org/network/580340.Tlie_0882InterPro IPR017900: IPR017896; KEGG: aco:Amico_1019 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Tlie_0883 protein networkhttps://string-db.org/network/580340.Tlie_0883PFAM: domain; Transketolase, C-terminal domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: aco:Amico [...]
Tlie_0884 protein networkhttps://string-db.org/network/580340.Tlie_0884Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-ox [...]
Tlie_0885 protein networkhttps://string-db.org/network/580340.Tlie_0885Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoi [...]
Tlie_0886 protein networkhttps://string-db.org/network/580340.Tlie_0886PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; InterPro IPR020084: IPR000086; KEGG: aco:Amico_1015 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrola [...]
Tlie_0887 protein networkhttps://string-db.org/network/580340.Tlie_0887Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: aco:Amico_1 [...]
Tlie_0888 protein networkhttps://string-db.org/network/580340.Tlie_0888Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molec [...]
Tlie_0889 protein networkhttps://string-db.org/network/580340.Tlie_0889Thymidine phosphorylase; PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimid [...]
Tlie_0890 protein networkhttps://string-db.org/network/580340.Tlie_0890RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1191 DNA-directed RNA polymerase specialized sigma [...]
Tlie_0891 protein networkhttps://string-db.org/network/580340.Tlie_0891PFAM: Acetoacetate decarboxylase (ADC); COGs: COG4689 Acetoacetate decarboxylase; InterPro IPR010451; KEGG: rxy:Rxyl_1034 acetoacetate decarboxylase; PFAM: Acetoacetate decarboxylase; SPTR: Aceto [...]
Tlie_0892 protein networkhttps://string-db.org/network/580340.Tlie_0892PFAM: Basic membrane protein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR001969: IPR003760; KEGG: aco:Amico_0244 basic membrane [...]
Tlie_0893 protein networkhttps://string-db.org/network/580340.Tlie_0893Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR017871: IPR003439: IPR003593; KEGG: [...]
Tlie_0894 protein networkhttps://string-db.org/network/580340.Tlie_0894Nucleoside ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4603 ABC-type uncharacterized transport system permease component; Int [...]
Tlie_0895 protein networkhttps://string-db.org/network/580340.Tlie_0895Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: aco:Amico [...]
Tlie_0896 protein networkhttps://string-db.org/network/580340.Tlie_0896Xanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836; KEGG: ac [...]
cysS protein networkhttps://string-db.org/network/580340.Tlie_0897PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR001943: IPR015803: IPR015273: IPR002308; [...]
Tlie_0898 protein networkhttps://string-db.org/network/580340.Tlie_0898Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
Tlie_0899 protein networkhttps://string-db.org/network/580340.Tlie_0899Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphat [...]
Tlie_0900 protein networkhttps://string-db.org/network/580340.Tlie_0900PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: aco:Amico_0999 riboflavin synthase, alpha subu [...]
ribBA protein networkhttps://string-db.org/network/580340.Tlie_09013,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GT [...]
ribH protein networkhttps://string-db.org/network/580340.Tlie_09026,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
serS protein networkhttps://string-db.org/network/580340.Tlie_0903seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
Tlie_0904 protein networkhttps://string-db.org/network/580340.Tlie_0904PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KE [...]
Tlie_0905 protein networkhttps://string-db.org/network/580340.Tlie_0905PFAM: CBS domain; InterPro IPR000644; KEGG: aco:Amico_0993 putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: [...]
Tlie_0906 protein networkhttps://string-db.org/network/580340.Tlie_0906Hypothetical protein; KEGG: dre:100148920 GTPase IMAP family member 7-like; SPTR: C2 domain containing protein.
Tlie_0907 protein networkhttps://string-db.org/network/580340.Tlie_0907PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0991 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V- [...]
Tlie_0908 protein networkhttps://string-db.org/network/580340.Tlie_0908H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0990 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPa [...]
Tlie_0909 protein networkhttps://string-db.org/network/580340.Tlie_0909Hypothetical protein; PFAM: ATP synthase (E/31 kDa) subunit; KEGG: aco:Amico_0989 hypothetical protein; SPTR: H+transporting two-sector ATPase E subunit.
Tlie_0910 protein networkhttps://string-db.org/network/580340.Tlie_0910PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0988 H+-ATPase subunit C-like protein; PFAM: H+transporting two-sector ATPase C (AC39) [...]
Tlie_0911 protein networkhttps://string-db.org/network/580340.Tlie_0911KEGG: aco:Amico_0987 hypothetical protein; SPTR: Putative uncharacterized protein.
atpA protein networkhttps://string-db.org/network/580340.Tlie_0912H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. [...]
atpB protein networkhttps://string-db.org/network/580340.Tlie_0913H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
Tlie_0914 protein networkhttps://string-db.org/network/580340.Tlie_0914PFAM: ATP synthase subunit D; COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: aco:Amico_0984 H+transporting two-sector ATPase D subunit; PFAM: H+transporting two-sector ATPase D subu [...]
rlmH protein networkhttps://string-db.org/network/580340.Tlie_0915Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
Tlie_0916 protein networkhttps://string-db.org/network/580340.Tlie_0916Uncharacterized protein family UPF0133; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
recR protein networkhttps://string-db.org/network/580340.Tlie_0917DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
Tlie_0918 protein networkhttps://string-db.org/network/580340.Tlie_0918PilT protein domain protein; PFAM: PIN domain; COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR006596: IPR002716; KEGG: aco:Amico_0980 PilT protein domain protein; P [...]
ispF protein networkhttps://string-db.org/network/580340.Tlie_09192-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phos [...]
guaB protein networkhttps://string-db.org/network/580340.Tlie_0920Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
rimP protein networkhttps://string-db.org/network/580340.Tlie_0921Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
nusA protein networkhttps://string-db.org/network/580340.Tlie_0922NusA antitermination factor; Participates in both transcription termination and antitermination.
Tlie_0923 protein networkhttps://string-db.org/network/580340.Tlie_0923PFAM: Protein of unknown function (DUF448); COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination; InterPro IPR007393; KEGG: aco:Amico_0974 protein of unknown functio [...]
infB protein networkhttps://string-db.org/network/580340.Tlie_0924Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
Tlie_0925 protein networkhttps://string-db.org/network/580340.Tlie_0925PFAM: Protein of unknown function (DUF503); InterPro IPR007546; KEGG: aco:Amico_0971 protein of unknown function DUF503; PFAM: protein of unknown function DUF503; SPTR: Putative uncharacterized p [...]
rbfA protein networkhttps://string-db.org/network/580340.Tlie_0926Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
Tlie_0927 protein networkhttps://string-db.org/network/580340.Tlie_0927Phosphoesterase RecJ domain protein; PFAM: DHHA1 domain; DHH family; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: aco:Amico_0969 phosphoesterase DHHA1; P [...]
truB protein networkhttps://string-db.org/network/580340.Tlie_0928tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
Tlie_0929 protein networkhttps://string-db.org/network/580340.Tlie_0929Riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0196 FAD synthase; InterPro IPR002606: IPR015864: IPR01 [...]
pcm protein networkhttps://string-db.org/network/580340.Tlie_0930protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl [...]
Tlie_0931 protein networkhttps://string-db.org/network/580340.Tlie_0931Hypothetical protein; PFAM: Domain of unknown function (DUF1850); KEGG: aco:Amico_0963 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0932 protein networkhttps://string-db.org/network/580340.Tlie_0932PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853: IPR010656 [...]
ileS protein networkhttps://string-db.org/network/580340.Tlie_0933Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
Tlie_0934 protein networkhttps://string-db.org/network/580340.Tlie_0934TraR/DksA family transcriptional regulator; PFAM: Prokaryotic dksA/traR C4-type zinc finger; InterPro IPR020458: IPR000962; KEGG: aba:Acid345_4135 TraR/DksA family transcriptional regulator; SPTR [...]
Tlie_0935 protein networkhttps://string-db.org/network/580340.Tlie_0935Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
Tlie_0936 protein networkhttps://string-db.org/network/580340.Tlie_0936PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616: IPR008532; KEGG: [...]
Tlie_0937 protein networkhttps://string-db.org/network/580340.Tlie_0937Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0194 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_0938 protein networkhttps://string-db.org/network/580340.Tlie_0938Hypothetical protein.
Tlie_0939 protein networkhttps://string-db.org/network/580340.Tlie_0939Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
tilS protein networkhttps://string-db.org/network/580340.Tlie_0940tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
Tlie_0941 protein networkhttps://string-db.org/network/580340.Tlie_0941PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR022272: IPR005904: IPR000836; K [...]
ftsH protein networkhttps://string-db.org/network/580340.Tlie_0942Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral mem [...]
uvrB protein networkhttps://string-db.org/network/580340.Tlie_0943Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abn [...]
Tlie_0944 protein networkhttps://string-db.org/network/580340.Tlie_0944Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
Tlie_0945 protein networkhttps://string-db.org/network/580340.Tlie_0945RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; COGs: COG0566 rRNA [...]
acpS protein networkhttps://string-db.org/network/580340.Tlie_0946Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
nnrD protein networkhttps://string-db.org/network/580340.Tlie_0947Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of A [...]
Tlie_0948 protein networkhttps://string-db.org/network/580340.Tlie_0948Uncharacterized protein family UPF0079, ATPase; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: aco:Amico_0 [...]
Tlie_0949 protein networkhttps://string-db.org/network/580340.Tlie_0949Peptidase M22 glycoprotease; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterP [...]
Tlie_0950 protein networkhttps://string-db.org/network/580340.Tlie_0950InterPro IPR006058; KEGG: tai:Taci_0972 sarcosine oxidase, alpha subunit; SPTR: Sarcosine oxidase, subunit alpha.
Tlie_0951 protein networkhttps://string-db.org/network/580340.Tlie_0951PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: tai:Taci_0971 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM [...]
Tlie_0952 protein networkhttps://string-db.org/network/580340.Tlie_0952InterPro IPR017900: IPR017896; KEGG: tai:Taci_0970 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Tlie_0953 protein networkhttps://string-db.org/network/580340.Tlie_0953PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: tai:Taci_0969 BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: [...]
Tlie_0954 protein networkhttps://string-db.org/network/580340.Tlie_0954PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, beta subunit family, heterotetrameric form; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: tai [...]
Tlie_0955 protein networkhttps://string-db.org/network/580340.Tlie_0955PFAM: 4Fe-4S binding domain; InterPro IPR017900: IPR017896; KEGG: tai:Taci_0967 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
Tlie_0956 protein networkhttps://string-db.org/network/580340.Tlie_0956PFAM: domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: aco:Amico_0795 pyruvate flavodoxin/ferredox [...]
Tlie_0957 protein networkhttps://string-db.org/network/580340.Tlie_0957Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-ox [...]
Tlie_0958 protein networkhttps://string-db.org/network/580340.Tlie_0958Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoi [...]
Tlie_0959 protein networkhttps://string-db.org/network/580340.Tlie_0959PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransf [...]
Tlie_0960 protein networkhttps://string-db.org/network/580340.Tlie_0960Hypothetical protein; PFAM: Vacuolar (H+)-ATPase G subunit; KEGG: aco:Amico_0801 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0961 protein networkhttps://string-db.org/network/580340.Tlie_0961PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0802 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V- [...]
Tlie_0962 protein networkhttps://string-db.org/network/580340.Tlie_0962H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0803 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPa [...]
atpE protein networkhttps://string-db.org/network/580340.Tlie_0963H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
Tlie_0964 protein networkhttps://string-db.org/network/580340.Tlie_0964PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0805 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector [...]
Tlie_0965 protein networkhttps://string-db.org/network/580340.Tlie_0965PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: aco:Amico_0806 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPT [...]
atpA-2 protein networkhttps://string-db.org/network/580340.Tlie_0966H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. [...]
atpB-2 protein networkhttps://string-db.org/network/580340.Tlie_0967H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
atpD protein networkhttps://string-db.org/network/580340.Tlie_0968V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
mraZ protein networkhttps://string-db.org/network/580340.Tlie_0969PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG2001 conserved hypothetical protein; InterPro IPR003444: IPR020603; KEGG: aco:Amico_0810 MraZ protein; PFAM: MraZ domain; SPTR: Protein mraZ; T [...]
rsmH protein networkhttps://string-db.org/network/580340.Tlie_0970S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
Tlie_0971 protein networkhttps://string-db.org/network/580340.Tlie_0971TIGRFAM: cell division protein FtsL; KEGG: tai:Taci_0865 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_0972 protein networkhttps://string-db.org/network/580340.Tlie_0972Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; COGs: COG0768 Cell division protein FtsI/penicillin-bind [...]
murE protein networkhttps://string-db.org/network/580340.Tlie_0973UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG [...]
murF protein networkhttps://string-db.org/network/580340.Tlie_0974UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
mraY protein networkhttps://string-db.org/network/580340.Tlie_0975Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murD protein networkhttps://string-db.org/network/580340.Tlie_0976UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF [...]
Tlie_0977 protein networkhttps://string-db.org/network/580340.Tlie_0977PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: aco:Amico_0818 cell cycle protein; PFAM: cell cycle protein; SPTR: Cell cycle protein; [...]
Tlie_0978 protein networkhttps://string-db.org/network/580340.Tlie_0978Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; COGs: COG0 [...]
murC protein networkhttps://string-db.org/network/580340.Tlie_0979UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murB protein networkhttps://string-db.org/network/580340.Tlie_0980UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
Tlie_0981 protein networkhttps://string-db.org/network/580340.Tlie_0981KEGG: aco:Amico_0822 hypothetical protein; SPTR: Putative uncharacterized protein.
ftsA protein networkhttps://string-db.org/network/580340.Tlie_0982Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
ftsZ protein networkhttps://string-db.org/network/580340.Tlie_0983Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
Tlie_0984 protein networkhttps://string-db.org/network/580340.Tlie_0984PFAM: Radical SAM superfamily; B12 binding domain; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: tai:Taci_0878 radical SAM domain protein; PFAM: Radical SAM domain prote [...]
Tlie_0985 protein networkhttps://string-db.org/network/580340.Tlie_0985Sporulation domain-containing protein; PFAM: Sporulation related domain; InterPro IPR007730; KEGG: aco:Amico_0825 sporulation domain protein; PFAM: Sporulation domain-containing protein; SPTR: Pu [...]
Tlie_0986 protein networkhttps://string-db.org/network/580340.Tlie_0986Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Tlie_0987 protein networkhttps://string-db.org/network/580340.Tlie_0987Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
Tlie_0988 protein networkhttps://string-db.org/network/580340.Tlie_0988Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
moaC protein networkhttps://string-db.org/network/580340.Tlie_0989GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
Tlie_0990 protein networkhttps://string-db.org/network/580340.Tlie_0990PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR008284: IPR020817: IPR001453; KEGG: tai:T [...]
Tlie_0991 protein networkhttps://string-db.org/network/580340.Tlie_0991Hypothetical protein; Displays ATPase and GTPase activities.
Tlie_0992 protein networkhttps://string-db.org/network/580340.Tlie_0992Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
Tlie_0993 protein networkhttps://string-db.org/network/580340.Tlie_0993Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
Tlie_0994 protein networkhttps://string-db.org/network/580340.Tlie_0994Amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative; COGs: COG3408 Glycogen debran [...]
Tlie_0995 protein networkhttps://string-db.org/network/580340.Tlie_0995Glyceraldehyde-3-phosphate dehydrogenase (NAD+); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceral [...]
pgk protein networkhttps://string-db.org/network/580340.Tlie_0996PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR015911: IPR001576; KEGG: tai:Taci_0890 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphogl [...]
tpiA protein networkhttps://string-db.org/network/580340.Tlie_0997Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
Tlie_0998 protein networkhttps://string-db.org/network/580340.Tlie_0998PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827: IPR006034: IPR006033; KEGG: pab:PAB2294 asparaginas [...]
rsfS protein networkhttps://string-db.org/network/580340.Tlie_0999Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S r [...]
Tlie_1000 protein networkhttps://string-db.org/network/580340.Tlie_1000PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; COGs: COG1316 Transcriptional regulator; InterPro [...]
nadD protein networkhttps://string-db.org/network/580340.Tlie_1001Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
obg protein networkhttps://string-db.org/network/580340.Tlie_1002GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Play [...]
rpmA protein networkhttps://string-db.org/network/580340.Tlie_1003PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; InterPro IPR018261: IPR001684; KEGG: csc:Csac_1570 50S ribosomal protein L27; PFAM: ribosomal pro [...]
Tlie_1004 protein networkhttps://string-db.org/network/580340.Tlie_1004PFAM: Protein of unknown function (DUF464); COGs: COG2868 ribosomal protein; InterPro IPR007422; KEGG: tte:TTE0914 ribosomal protein; PFAM: protein of unknown function DUF464; SPTR: Predicted rib [...]
rplU protein networkhttps://string-db.org/network/580340.Tlie_1005LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
Tlie_1006 protein networkhttps://string-db.org/network/580340.Tlie_1006Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0482 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_1007 protein networkhttps://string-db.org/network/580340.Tlie_1007DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
nadK protein networkhttps://string-db.org/network/580340.Tlie_1008ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hyd [...]
Tlie_1009 protein networkhttps://string-db.org/network/580340.Tlie_1009PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; COGs: COG1189 rRNA methylase; InterPro IPR002942: IPR004538: IPR002877; KEGG: aco:Amico_0849 hemolysin A; PFA [...]
dxs protein networkhttps://string-db.org/network/580340.Tlie_10101-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
Tlie_1011 protein networkhttps://string-db.org/network/580340.Tlie_1011PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: aco:Amico_0851 geranyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl s [...]
xseB protein networkhttps://string-db.org/network/580340.Tlie_1012Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...]
rpmB protein networkhttps://string-db.org/network/580340.Tlie_1013LSU ribosomal protein L28P; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: aco:Amico_0853 ribosomal protein L28; PFAM: [...]
Tlie_1014 protein networkhttps://string-db.org/network/580340.Tlie_1014PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; COGs: COG1564 Thiamine pyrophosphokinase; InterPro IP [...]
Tlie_1015 protein networkhttps://string-db.org/network/580340.Tlie_1015DNA translocase FtsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR018541; KEGG: aco:Amico_0855 cell [...]
Tlie_1016 protein networkhttps://string-db.org/network/580340.Tlie_1016PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: aco:Amico_0856 peptidase U62 modulator of DNA gyrase; PFAM: p [...]
mltG protein networkhttps://string-db.org/network/580340.Tlie_1017Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG fam [...]
Tlie_1018 protein networkhttps://string-db.org/network/580340.Tlie_1018Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmi [...]
Tlie_1019 protein networkhttps://string-db.org/network/580340.Tlie_1019PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: tai:Taci_1393 ABC transporter related protein; PFA [...]
Tlie_1020 protein networkhttps://string-db.org/network/580340.Tlie_1020Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino [...]
Tlie_1021 protein networkhttps://string-db.org/network/580340.Tlie_1021Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport [...]
Tlie_1022 protein networkhttps://string-db.org/network/580340.Tlie_1022Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport [...]
hutH protein networkhttps://string-db.org/network/580340.Tlie_1023PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase; histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106: IPR005921; KEGG: tai:Tac [...]
Tlie_1024 protein networkhttps://string-db.org/network/580340.Tlie_1024PFAM: Radical SAM superfamily; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR016431: IPR007197; KEGG: aco:Amico_0859 radical SAM domain protein; PFAM: Radical SAM domain pro [...]
Tlie_1025 protein networkhttps://string-db.org/network/580340.Tlie_1025AMMECR1 domain protein; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family; COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: aco:Amico_0860 AMMECR1 domain prote [...]
Tlie_1026 protein networkhttps://string-db.org/network/580340.Tlie_1026PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; COGs: COG3885 conserved hypothetical protein; InterPro IPR004183; KEGG: aco:Amico_0860 AMMECR1 domain protein; PFAM: Extradiol r [...]
Tlie_1027 protein networkhttps://string-db.org/network/580340.Tlie_1027Hypothetical protein; PFAM: HTH domain; KEGG: bth:BT_2096 putative transcriptional regulator; SPTR: Putative transcriptional regulator.
queA protein networkhttps://string-db.org/network/580340.Tlie_1028S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (o [...]
Tlie_1029 protein networkhttps://string-db.org/network/580340.Tlie_1029SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486: IPR013693; KEGG: aco:Amico_ [...]
Tlie_1030 protein networkhttps://string-db.org/network/580340.Tlie_1030PFAM: Protein of unknown function (DUF2905); KEGG: saf:SULAZ_0213 hypothetical protein; SPTR: Putative uncharacterized protein.
ruvB protein networkhttps://string-db.org/network/580340.Tlie_1031Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promot [...]
ruvA protein networkhttps://string-db.org/network/580340.Tlie_1032Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promot [...]
ruvC protein networkhttps://string-db.org/network/580340.Tlie_1033Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with [...]
Tlie_1034 protein networkhttps://string-db.org/network/580340.Tlie_1034PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: aco:Amico_0867 protein o [...]
nadE protein networkhttps://string-db.org/network/580340.Tlie_1035NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
Tlie_1036 protein networkhttps://string-db.org/network/580340.Tlie_1036PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_1037 protein networkhttps://string-db.org/network/580340.Tlie_1037PFAM: Radical SAM superfamily; COGs: COG1031 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: tai:Taci_0927 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator [...]
Tlie_1038 protein networkhttps://string-db.org/network/580340.Tlie_1038Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: tai:Taci_0928 nitrilase/cyanide hydratas [...]
Tlie_1039 protein networkhttps://string-db.org/network/580340.Tlie_1039Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
Tlie_1040 protein networkhttps://string-db.org/network/580340.Tlie_1040KEGG: tai:Taci_1360 hypothetical protein; SPTR: Putative regulatory protein, FmdB.
Tlie_1041 protein networkhttps://string-db.org/network/580340.Tlie_1041Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
arcA protein networkhttps://string-db.org/network/580340.Tlie_1042Arginine deiminase; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase; COGs: COG2235 Arginine deiminase; InterPro IPR003876: IPR003198; KEGG: tte:TTE0103 arginine deiminase; PFAM: amidinotran [...]
speH protein networkhttps://string-db.org/network/580340.Tlie_1043S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of th [...]
Tlie_1044 protein networkhttps://string-db.org/network/580340.Tlie_1044Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR020855: IPR005925: IPR006035; KEGG: pth:PTH_09 [...]
speE protein networkhttps://string-db.org/network/580340.Tlie_1045Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermid [...]
Tlie_1046 protein networkhttps://string-db.org/network/580340.Tlie_1046PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; COGs: COG1945 conserved hypothetical protein; InterPro IPR000209: IPR002724; KEGG: [...]
ispG protein networkhttps://string-db.org/network/580340.Tlie_10474-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...]
Tlie_1048 protein networkhttps://string-db.org/network/580340.Tlie_1048Membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent pro [...]
dxr protein networkhttps://string-db.org/network/580340.Tlie_10491-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
Tlie_1050 protein networkhttps://string-db.org/network/580340.Tlie_1050PFAM: Cytidylyltransferase family; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: aco:Amico_0874 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; [...]
Tlie_1051 protein networkhttps://string-db.org/network/580340.Tlie_1051Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
Tlie_1052 protein networkhttps://string-db.org/network/580340.Tlie_1052Phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122 [...]
Tlie_1053 protein networkhttps://string-db.org/network/580340.Tlie_1053KEGG: tai:Taci_0937 hypothetical protein; SPTR: Putative uncharacterized protein.
hisC protein networkhttps://string-db.org/network/580340.Tlie_1054PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR001 [...]
murA protein networkhttps://string-db.org/network/580340.Tlie_1055UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
Tlie_1056 protein networkhttps://string-db.org/network/580340.Tlie_1056PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: aco:Amico_0880 UDP-N-acetylgl [...]
Tlie_1057 protein networkhttps://string-db.org/network/580340.Tlie_1057Glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase family 4; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate trans [...]
upp protein networkhttps://string-db.org/network/580340.Tlie_1058Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
Tlie_1059 protein networkhttps://string-db.org/network/580340.Tlie_1059PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR003593: IPR005129; KEGG: tai:Taci [...]
Tlie_1060 protein networkhttps://string-db.org/network/580340.Tlie_1060KEGG: tai:Taci_0945 hypothetical protein; SPTR: Flagellar biosynthesis protein FliR.
Tlie_1061 protein networkhttps://string-db.org/network/580340.Tlie_1061PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: [...]
Tlie_1062 protein networkhttps://string-db.org/network/580340.Tlie_1062Protein of unknown function DUF152; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; COGs: COG1496 conserved hypothetical protein; InterPro IPR [...]
Tlie_1063 protein networkhttps://string-db.org/network/580340.Tlie_1063FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamat [...]
valS protein networkhttps://string-db.org/network/580340.Tlie_1064valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
engB protein networkhttps://string-db.org/network/580340.Tlie_1065Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase sup [...]
lon protein networkhttps://string-db.org/network/580340.Tlie_1066ATP-dependent proteinase; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for c [...]
clpX protein networkhttps://string-db.org/network/580340.Tlie_1067ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/580340.Tlie_1068ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the d [...]
tig protein networkhttps://string-db.org/network/580340.Tlie_1069Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
Tlie_1070 protein networkhttps://string-db.org/network/580340.Tlie_1070TrpR like protein, YerC/YecD; PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD; COGs: COG4496 conserved hypothetical protein; InterPro IPR013368: IPR000831: IPR013335; KEGG: a [...]
Tlie_1071 protein networkhttps://string-db.org/network/580340.Tlie_1071Hypothetical protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362); COGs: COG2006 conserved hypothetical protein; InterPro IPR017900: IPR017896; KEGG: mpd:MCP_1114 hypothetica [...]
Tlie_1072 protein networkhttps://string-db.org/network/580340.Tlie_1072PFAM: HhH-GPD superfamily base excision DNA repair protein; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR004035: IPR003265: IPR003651; KEGG: aco:Amico_1041 DNA-(apurinic or apyrimidini [...]
Tlie_1073 protein networkhttps://string-db.org/network/580340.Tlie_1073PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; COGs: COG1067 ATP-dependent protease; InterPro IPR001984; KEGG: tai:Taci_0981 peptida [...]
Tlie_1074 protein networkhttps://string-db.org/network/580340.Tlie_1074PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loo [...]
Tlie_1075 protein networkhttps://string-db.org/network/580340.Tlie_1075cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; COGs: COG2109 ATP:corrinoid adenosyltransfera [...]
Tlie_1076 protein networkhttps://string-db.org/network/580340.Tlie_1076(NiFe) hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; COGs: COG0068 Hydrogenase maturation factor; Inte [...]
Tlie_1077 protein networkhttps://string-db.org/network/580340.Tlie_1077Fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II; COGs: COG1494 Fructose-1 6-bisphosphatase/sedohep [...]
Tlie_1078 protein networkhttps://string-db.org/network/580340.Tlie_1078PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterProIPR020557: IPR000362: IPR003031: IPR004769: IPR 019468; KEGG: aco:Am [...]
Tlie_1079 protein networkhttps://string-db.org/network/580340.Tlie_1079KEGG: aco:Amico_1049 hypothetical protein; SPTR: Putative uncharacterized protein.
ftsY protein networkhttps://string-db.org/network/580340.Tlie_1080Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
Tlie_1081 protein networkhttps://string-db.org/network/580340.Tlie_1081PSP1 domain protein; PFAM: PSP1 C-terminal conserved region; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: aco:Amico_1051 PSP1 domain protein; PFAM: PSP1 domain protein [...]
Tlie_1082 protein networkhttps://string-db.org/network/580340.Tlie_1082KEGG: aco:Amico_1052 DNA polymerase III gamma/tau subunits-like protein; SPTR: DNA polymerase III gamma/tau subunits-like protein.
tmk protein networkhttps://string-db.org/network/580340.Tlie_1083Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
Tlie_1084 protein networkhttps://string-db.org/network/580340.Tlie_1084Mammalian cell entry related domain protein; PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR00339 [...]
Tlie_1085 protein networkhttps://string-db.org/network/580340.Tlie_1085PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: cpi:Cpin_3315 ABC trans [...]
Tlie_1086 protein networkhttps://string-db.org/network/580340.Tlie_1086PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease com [...]
Tlie_1087 protein networkhttps://string-db.org/network/580340.Tlie_1087Hypothetical protein; PFAM: SpoIVB peptidase S55; KEGG: aco:Amico_1054 hypothetical protein; SPTR: Putative uncharacterized protein.
prfB protein networkhttps://string-db.org/network/580340.Tlie_1088Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
birA protein networkhttps://string-db.org/network/580340.Tlie_1089biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
Tlie_1090 protein networkhttps://string-db.org/network/580340.Tlie_1090KEGG: aco:Amico_1058 hypothetical protein; SPTR: Putative uncharacterized protein.
pyrE protein networkhttps://string-db.org/network/580340.Tlie_1091Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
pyrF protein networkhttps://string-db.org/network/580340.Tlie_1092Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
pyrD protein networkhttps://string-db.org/network/580340.Tlie_1093Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
Tlie_1094 protein networkhttps://string-db.org/network/580340.Tlie_1094PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; [...]
pyrC protein networkhttps://string-db.org/network/580340.Tlie_1095Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family [...]
pyrB protein networkhttps://string-db.org/network/580340.Tlie_1096PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG054 [...]
pyrR protein networkhttps://string-db.org/network/580340.Tlie_1097Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
rnc protein networkhttps://string-db.org/network/580340.Tlie_1098Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
Tlie_1099 protein networkhttps://string-db.org/network/580340.Tlie_10993-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
acpP protein networkhttps://string-db.org/network/580340.Tlie_1100Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
Tlie_1101 protein networkhttps://string-db.org/network/580340.Tlie_11013-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
Tlie_1102 protein networkhttps://string-db.org/network/580340.Tlie_1102(Acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; Inte [...]
Tlie_1103 protein networkhttps://string-db.org/network/580340.Tlie_1103Enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxy [...]
fabH protein networkhttps://string-db.org/network/580340.Tlie_11043-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
plsX protein networkhttps://string-db.org/network/580340.Tlie_1105Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...]
Tlie_1106 protein networkhttps://string-db.org/network/580340.Tlie_1106InterPro IPR017275; KEGG: tai:Taci_1102 transcriptional regulator, DeoR family; SPTR: Fatty acid biosynthesis transcriptional regulator.
rpmF protein networkhttps://string-db.org/network/580340.Tlie_1107PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: tai:Taci_1103 ribosomal protein L32; PFAM: ribosomal L32p prote [...]
Tlie_1108 protein networkhttps://string-db.org/network/580340.Tlie_1108Protein of unknown function DUF177; PFAM: Uncharacterized ACR, COG1399; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: aco:Amico_1070 protein of unkn [...]
ackA protein networkhttps://string-db.org/network/580340.Tlie_1109Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
tmcAL protein networkhttps://string-db.org/network/580340.Tlie_1110Protein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an [...]
coaD protein networkhttps://string-db.org/network/580340.Tlie_1111Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...]
Tlie_1112 protein networkhttps://string-db.org/network/580340.Tlie_1112PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR002052: IPR004398; KEGG: aco:Amico_1074 protein of u [...]
trmB protein networkhttps://string-db.org/network/580340.Tlie_1113tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
Tlie_1114 protein networkhttps://string-db.org/network/580340.Tlie_1114PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase [...]
Tlie_1115 protein networkhttps://string-db.org/network/580340.Tlie_1115PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:f [...]
Tlie_1116 protein networkhttps://string-db.org/network/580340.Tlie_1116PFAM: domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: aco:Amico_1315 pyruvate flavodoxin/ferredox [...]
Tlie_1117 protein networkhttps://string-db.org/network/580340.Tlie_1117Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-ox [...]
rsmA protein networkhttps://string-db.org/network/580340.Tlie_1118Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
Tlie_1119 protein networkhttps://string-db.org/network/580340.Tlie_1119PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: aco:Amico_1079 histone family protein DNA-binding protein; PFAM: histone famil [...]
der protein networkhttps://string-db.org/network/580340.Tlie_1120Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA [...]
Tlie_1121 protein networkhttps://string-db.org/network/580340.Tlie_1121Replication restart DNA helicase PriA; TIGRFAM: primosomal protein N'; COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; KEGG: aco:Amico_1081 primosomal protei [...]
Tlie_1122 protein networkhttps://string-db.org/network/580340.Tlie_1122Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantoth [...]
Tlie_1123 protein networkhttps://string-db.org/network/580340.Tlie_1123RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
gmk protein networkhttps://string-db.org/network/580340.Tlie_1124Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
Tlie_1125 protein networkhttps://string-db.org/network/580340.Tlie_1125PFAM: Domain of unknown function (DUF370); COGs: COG2052 conserved hypothetical protein; InterPro IPR007169; KEGG: aco:Amico_1085 protein of unknown function DUF370; PFAM: protein of unknown func [...]
Tlie_1126 protein networkhttps://string-db.org/network/580340.Tlie_1126YicC-like domain-containing protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; COGs: COG1561 Uncharacterized stress-induc [...]
Tlie_1127 protein networkhttps://string-db.org/network/580340.Tlie_1127PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: aco:Amico_1088 phospholipi [...]
cmk protein networkhttps://string-db.org/network/580340.Tlie_1128PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0283 Cytidylate kinase; InterPro IPR003136: IPR000623: IPR011994; KEGG: brm:Bmur_0695 cytidylate kinase; PFAM: cytidylate kinase regi [...]
Tlie_1129 protein networkhttps://string-db.org/network/580340.Tlie_1129PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR01849 [...]
Tlie_1130 protein networkhttps://string-db.org/network/580340.Tlie_1130Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA th [...]
Tlie_1131 protein networkhttps://string-db.org/network/580340.Tlie_1131Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell [...]
trpS protein networkhttps://string-db.org/network/580340.Tlie_1132tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
Tlie_1133 protein networkhttps://string-db.org/network/580340.Tlie_1133Protein of unknown function DUF34; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG0327 conserved hypothetical protein; InterPro IPR [...]
Tlie_1134 protein networkhttps://string-db.org/network/580340.Tlie_1134PFAM: 4Fe-4S binding domain; InterPro IPR017900: IPR001080: IPR017896; KEGG: aco:Amico_1152 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domai [...]
Tlie_1135 protein networkhttps://string-db.org/network/580340.Tlie_1135Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; COGs: COG0503 Adenine/guanine ph [...]
ispE protein networkhttps://string-db.org/network/580340.Tlie_1136GHMP kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
Tlie_1137 protein networkhttps://string-db.org/network/580340.Tlie_1137PFAM: Protein of unknown function (DUF1021); InterPro IPR009366; KEGG: aco:Amico_1155 hypothetical protein; PFAM: protein of unknown function DUF1021; SPTR: Putative uncharacterized protein.
Tlie_1138 protein networkhttps://string-db.org/network/580340.Tlie_1138PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding prot [...]
selA protein networkhttps://string-db.org/network/580340.Tlie_1139L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
Tlie_1141 protein networkhttps://string-db.org/network/580340.Tlie_1141Selenium metabolism protein YedF; PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF; InterPro IPR019870; KEGG: aco:Amico_1158 selenium metabolism protein Y [...]
Tlie_1142 protein networkhttps://string-db.org/network/580340.Tlie_1142Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds [...]
lepA protein networkhttps://string-db.org/network/580340.Tlie_1143GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
purC protein networkhttps://string-db.org/network/580340.Tlie_1144PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR018236: IPR [...]
purS protein networkhttps://string-db.org/network/580340.Tlie_1145Phosphoribosylformylglycinamidine synthase, purS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversi [...]
purQ protein networkhttps://string-db.org/network/580340.Tlie_1146Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conv [...]
purL protein networkhttps://string-db.org/network/580340.Tlie_1147Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion [...]
purF protein networkhttps://string-db.org/network/580340.Tlie_1148Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
purM protein networkhttps://string-db.org/network/580340.Tlie_1149Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synth [...]
purN protein networkhttps://string-db.org/network/580340.Tlie_1150Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
purH protein networkhttps://string-db.org/network/580340.Tlie_1151PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH [...]
purD protein networkhttps://string-db.org/network/580340.Tlie_1152Phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domai [...]
purE protein networkhttps://string-db.org/network/580340.Tlie_1153Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
Tlie_1154 protein networkhttps://string-db.org/network/580340.Tlie_1154PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: tai:Taci_0754 radical SAM domain protein; PF [...]
Tlie_1155 protein networkhttps://string-db.org/network/580340.Tlie_1155KEGG: zpr:ZPR_3058 hypothetical protein.
Tlie_1156 protein networkhttps://string-db.org/network/580340.Tlie_1156Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 pyridoxal-5'-phosph [...]
Tlie_1157 protein networkhttps://string-db.org/network/580340.Tlie_1157PFAM: Ornithine cyclodeaminase/mu-crystallin family; TIGRFAM: alanine dehydrogenase, Archaeoglobus fulgidus type; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; [...]
Tlie_1159 protein networkhttps://string-db.org/network/580340.Tlie_1159PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; COGs: COG0460 Homoserine dehydrogenase; InterPro IPR019811: IPR005106: IPR001342; KEGG: aco:Amico_1642 homoserine deh [...]
Tlie_1160 protein networkhttps://string-db.org/network/580340.Tlie_1160PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR011340: IPR000192; KEGG: rrs:RoseRS_3113 cysteine d [...]
Tlie_1161 protein networkhttps://string-db.org/network/580340.Tlie_1161Hypothetical protein; COGs: COG1896 hydrolase of HD superfamily; KEGG: eel:EUBELI_00454 putative hydrolases of HD superfamily; SPTR: Putative uncharacterized protein.
Tlie_1162 protein networkhttps://string-db.org/network/580340.Tlie_1162PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR018211: IPR001670; KEGG: pca:Pcar_2847 alcohol dehydrogenase, class IV; PFAM: iron-containin [...]
Tlie_1163 protein networkhttps://string-db.org/network/580340.Tlie_1163PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related [...]
Tlie_1164 protein networkhttps://string-db.org/network/580340.Tlie_1164PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: tpd:Teth39_0897 cystathionine gamma-synthase; PFAM: C [...]
Tlie_1165 protein networkhttps://string-db.org/network/580340.Tlie_1165KEGG: aco:Amico_0246 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1166 protein networkhttps://string-db.org/network/580340.Tlie_1166PFAM: tRNA synthetases class II (A); COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164: IPR018165; KEGG: tai:Taci_0600 threonyl/alanyl tRNA synthetase SAD; PFAM: Alanyl-tRNA synthetase, cl [...]
Tlie_1167 protein networkhttps://string-db.org/network/580340.Tlie_1167PFAM: Acylphosphatase; COGs: COG1254 Acylphosphatase; InterPro IPR017968: IPR020456: IPR001792; KEGG: pfu:PF0283 acylphosphatase; PFAM: acylphosphatase; SPTR: Acylphosphatase.
argG protein networkhttps://string-db.org/network/580340.Tlie_1168PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223: IPR001518; KEGG: tai:Taci_0753 argininosuccinate synthase; PFAM: [...]
Tlie_1169 protein networkhttps://string-db.org/network/580340.Tlie_1169Hypothetical protein.
surE protein networkhttps://string-db.org/network/580340.Tlie_1170Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
Tlie_1171 protein networkhttps://string-db.org/network/580340.Tlie_1171PFAM: Peptidase family M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: aco:Amico_1176 peptidase M50; PFAM: peptidase M50; SPTR: Peptidase M50; manually curated.
Tlie_1172 protein networkhttps://string-db.org/network/580340.Tlie_1172Polynucleotide adenylyltransferase region; PFAM: DHHA1 domain; DHH family; CBS domain; Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR000 [...]
coaE protein networkhttps://string-db.org/network/580340.Tlie_1173dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
Tlie_1174 protein networkhttps://string-db.org/network/580340.Tlie_1174PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: aco:Amico_1179 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/RE [...]
Tlie_1175 protein networkhttps://string-db.org/network/580340.Tlie_1175Hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expre [...]
hypA protein networkhttps://string-db.org/network/580340.Tlie_1176Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
Tlie_1177 protein networkhttps://string-db.org/network/580340.Tlie_1177PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; [...]
hpf protein networkhttps://string-db.org/network/580340.Tlie_1178Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and som [...]
Tlie_1179 protein networkhttps://string-db.org/network/580340.Tlie_1179PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR001176: IPR004839; KEGG: aco:Amico_1183 aminotransferase class I and II; [...]
Tlie_1180 protein networkhttps://string-db.org/network/580340.Tlie_1180PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase; COGs: COG0549 Carbamate kinase; InterPro IPR003964: IPR001048; KEGG: aco:Amico_0204 carbamate kinase; PFAM: aspartate/glutamate/uridylat [...]
frr protein networkhttps://string-db.org/network/580340.Tlie_1181Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/580340.Tlie_1182Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
tsf protein networkhttps://string-db.org/network/580340.Tlie_1183Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
rpsB protein networkhttps://string-db.org/network/580340.Tlie_1184PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR018130: IPR001865: IPR005706; KEGG: tai:Taci_0742 ribosomal protein S2; [...]
Tlie_1185 protein networkhttps://string-db.org/network/580340.Tlie_1185Protein of unknown function DUF156; PFAM: Uncharacterised BCR, COG1937; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: aco:Amico_1190 protein of unknown function DUF156; [...]
tadA protein networkhttps://string-db.org/network/580340.Tlie_1187CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
Tlie_1188 protein networkhttps://string-db.org/network/580340.Tlie_1188KEGG: spu:588077 hypothetical LOC588077.
Tlie_1189 protein networkhttps://string-db.org/network/580340.Tlie_1189Hypothetical protein; PFAM: Bacterial cellulose synthase subunit; KEGG: bsu:BSU04310 putative regulator; SPTR: Uncharacterized protein ydaN.
Tlie_1190 protein networkhttps://string-db.org/network/580340.Tlie_1190GrdX protein; KEGG: cpo:COPRO5265_0212 GrdX protein; SPTR: GrdX protein.
Tlie_1191 protein networkhttps://string-db.org/network/580340.Tlie_1191TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; InterPro IPR010187; KEGG: tai:Taci_1136 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; SPTR [...]
Tlie_1192 protein networkhttps://string-db.org/network/580340.Tlie_1192PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; InterPro IPR010187; KEGG: chy:CHY_2393 glycine re [...]
Tlie_1193 protein networkhttps://string-db.org/network/580340.Tlie_1193PFAM: Glycine/sarcosine/betaine reductase component B subunits; InterPro IPR016585: IPR015417; KEGG: tai:Taci_1138 glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; P [...]
Tlie_1194 protein networkhttps://string-db.org/network/580340.Tlie_1194Transcriptional regulator, CdaR; PFAM: Putative sugar diacid recognition; COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR008599; KEGG: aco:Amico_0355 transcriptional regulator, Cda [...]
Tlie_1195 protein networkhttps://string-db.org/network/580340.Tlie_1195PFAM: Radical SAM superfamily; B12 binding domain; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: aco:Amico_0326 radical SAM domain protein; PFAM: Radical SAM domain prot [...]
Tlie_1196 protein networkhttps://string-db.org/network/580340.Tlie_1196Hypothetical protein; PFAM: SurA N-terminal domain; KEGG: aco:Amico_1258 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1197 protein networkhttps://string-db.org/network/580340.Tlie_1197DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I; COGs: COG0749 DNA polymera [...]
gltX protein networkhttps://string-db.org/network/580340.Tlie_1198glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
Tlie_1199 protein networkhttps://string-db.org/network/580340.Tlie_1199PFAM: 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); [...]
Tlie_1200 protein networkhttps://string-db.org/network/580340.Tlie_1200PFAM: NADH dehydrogenase; COGs: COG0650 Formate hydrogenlyase subunit 4; InterPro IPR001694; KEGG: aco:Amico_1263 respiratory-chain NADH dehydrogenase subunit 1; PFAM: respiratory-chain NADH dehy [...]
Tlie_1201 protein networkhttps://string-db.org/network/580340.Tlie_1201NADH-ubiquinone oxidoreductase chain 49kDa; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IP [...]
Tlie_1202 protein networkhttps://string-db.org/network/580340.Tlie_1202PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; COGs: COG3262 Ni Fe-hydrogenase III component G; InterPro IPR001268; KEGG: aco:Amico_1265 NADH dehydrogenase (ubiquinone) 30 kDa subunit [...]
Tlie_1203 protein networkhttps://string-db.org/network/580340.Tlie_1203PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: aco:Amico_1266 N [...]
Tlie_1204 protein networkhttps://string-db.org/network/580340.Tlie_1204KEGG: aco:Amico_1267 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1205 protein networkhttps://string-db.org/network/580340.Tlie_1205PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+ [...]
Tlie_1206 protein networkhttps://string-db.org/network/580340.Tlie_1206PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: aco:Amico_1269 NADH-ubiquinone oxidoreductase cha [...]
Tlie_1207 protein networkhttps://string-db.org/network/580340.Tlie_1207Membrane bound hydrogenase subunit mbhF; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: mhu:Mhun_2584 putative monovalent cation/H+ antiporter subunit B; PFA [...]
Tlie_1208 protein networkhttps://string-db.org/network/580340.Tlie_1208KEGG: aco:Amico_1271 putative multicomponent Na+-H+ antiporter subunit A; SPTR: pH adaptation potassium efflux system protein B1 sodium-potassium/hydrogen antiporter subunit B1.
Tlie_1209 protein networkhttps://string-db.org/network/580340.Tlie_1209Membrane bound hydrogenase subunit mbhD; KEGG: aco:Amico_1272 putative monovalent cation/H+ antiporter subunit B; SPTR: Putative monovalent cation/H+ antiporter subunit B.
Tlie_1210 protein networkhttps://string-db.org/network/580340.Tlie_1210PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: aco:Amico_12 [...]
Tlie_1211 protein networkhttps://string-db.org/network/580340.Tlie_1211Membrane bound hydrogenase subunit mbhB; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro IPR007208; KEGG: aco:Amico_1274 multiple resistance and pH regulation protei [...]
Tlie_1212 protein networkhttps://string-db.org/network/580340.Tlie_1212PFAM: Na+/H+ ion antiporter subunit; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: aco:Amico_1275 cation antiporter; PFAM: cation antiporter; SPTR: Cation a [...]
Tlie_1213 protein networkhttps://string-db.org/network/580340.Tlie_1213InterPro IPR005302; KEGG: aco:Amico_0030 MOSC domain containing protein; SPTR: MOSC domain protein.
Tlie_1214 protein networkhttps://string-db.org/network/580340.Tlie_1214PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_1215 protein networkhttps://string-db.org/network/580340.Tlie_1215KEGG: mdo:100023263 hypothetical protein LOC100023263; SPTR: Multi-sensor signal transduction histidine kinase.
Tlie_1216 protein networkhttps://string-db.org/network/580340.Tlie_1216Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933 [...]
Tlie_1217 protein networkhttps://string-db.org/network/580340.Tlie_1217PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: tai:Taci_1432 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; ma [...]
Tlie_1218 protein networkhttps://string-db.org/network/580340.Tlie_1218PFAM: Protein of unknown function (DUF3311); KEGG: tai:Taci_1433 hypothetical protein; SPTR: Putative uncharacterized protein.
corA protein networkhttps://string-db.org/network/580340.Tlie_1219Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
Tlie_1220 protein networkhttps://string-db.org/network/580340.Tlie_1220D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
Tlie_1221 protein networkhttps://string-db.org/network/580340.Tlie_1221PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_1222 protein networkhttps://string-db.org/network/580340.Tlie_1222PFAM: D-ala D-ala ligase C-terminus; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR011761; KEGG: aco:Amico_0187 D-alanine--D-alanine ligase; SPTR: Putative D [...]
Tlie_1223 protein networkhttps://string-db.org/network/580340.Tlie_1223GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: aco:Amico_0186 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: G [...]
smpB protein networkhttps://string-db.org/network/580340.Tlie_1225SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
Tlie_1226 protein networkhttps://string-db.org/network/580340.Tlie_1226PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_1227 protein networkhttps://string-db.org/network/580340.Tlie_1227Sulfur carrier protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; InterPro IPR003749: IPR010035; KEGG: tai:Taci_0802 thiamine biosynthesis protein ThiS; PFAM: thiamineS [...]
Tlie_1228 protein networkhttps://string-db.org/network/580340.Tlie_1228KEGG: aco:Amico_1351 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1229 protein networkhttps://string-db.org/network/580340.Tlie_1229PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: aco:Amico_1352 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochoris [...]
Tlie_1230 protein networkhttps://string-db.org/network/580340.Tlie_1230Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: tai:Taci_0809 beta-lactamase domain p [...]
Tlie_1231 protein networkhttps://string-db.org/network/580340.Tlie_1231Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302; KEGG: tai:Taci_0810 malate d [...]
Tlie_1232 protein networkhttps://string-db.org/network/580340.Tlie_1232methylated-DNA/protein- cysteinemethyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DN [...]
Tlie_1233 protein networkhttps://string-db.org/network/580340.Tlie_1233PFAM: Phospholipid methyltransferase; COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; InterPro IPR007269; KEGG: aco:Amico_1355 putative protein-S-isoprenylcysteine methyltra [...]
Tlie_1234 protein networkhttps://string-db.org/network/580340.Tlie_1234PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: aco:Amico_1356 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1235 protein networkhttps://string-db.org/network/580340.Tlie_1235PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol [...]
Tlie_1236 protein networkhttps://string-db.org/network/580340.Tlie_1236PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: aco:Amico_1359 NAD-dependent epimerase/dehydratase; PFAM: NAD-dep [...]
Tlie_1237 protein networkhttps://string-db.org/network/580340.Tlie_1237PFAM: Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eI [...]
gmhA protein networkhttps://string-db.org/network/580340.Tlie_1238Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
Tlie_1239 protein networkhttps://string-db.org/network/580340.Tlie_1239PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: tai:Taci_0801 tw [...]
Tlie_1240 protein networkhttps://string-db.org/network/580340.Tlie_1240PP-loop domain protein; PFAM: PP-loop family; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR011063: IPR012089; KEGG: aco:Amico_1363 PP-loop [...]
Tlie_1241 protein networkhttps://string-db.org/network/580340.Tlie_1241SufBD protein; PFAM: Uncharacterized protein family (UPF0051); COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: tai:Taci_079 [...]
Tlie_1242 protein networkhttps://string-db.org/network/580340.Tlie_1242PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEG [...]
panB protein networkhttps://string-db.org/network/580340.Tlie_12433-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to f [...]
panC protein networkhttps://string-db.org/network/580340.Tlie_1244Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
pgi protein networkhttps://string-db.org/network/580340.Tlie_1245PFAM: Phosphoglucose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672: IPR018189; KEGG: aco:Amico_1366 phosphoglucose isomerase (PGI); PFAM: phosphoglucose isomerase (PG [...]
Tlie_1246 protein networkhttps://string-db.org/network/580340.Tlie_1246PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB-family; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR011767: IPR002109: IPR011911; KEGG: tai:Taci_0792 glutaredoxin-lik [...]
Tlie_1247 protein networkhttps://string-db.org/network/580340.Tlie_1247PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: dtu:Dtur_0916 NADH dehydrogenase (ubiquinone) 24 kD [...]
Tlie_1248 protein networkhttps://string-db.org/network/580340.Tlie_1248Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd su [...]
Tlie_1249 protein networkhttps://string-db.org/network/580340.Tlie_1249PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydr [...]
Tlie_1250 protein networkhttps://string-db.org/network/580340.Tlie_1250PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GT [...]
gatB protein networkhttps://string-db.org/network/580340.Tlie_1251glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
gatA protein networkhttps://string-db.org/network/580340.Tlie_1252glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl- [...]
gatC protein networkhttps://string-db.org/network/580340.Tlie_1253glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
ligA protein networkhttps://string-db.org/network/580340.Tlie_1254DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...]
lysS protein networkhttps://string-db.org/network/580340.Tlie_1255PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (cl [...]
Tlie_1256 protein networkhttps://string-db.org/network/580340.Tlie_1256Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; B [...]
coaX protein networkhttps://string-db.org/network/580340.Tlie_1257Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
Tlie_1258 protein networkhttps://string-db.org/network/580340.Tlie_1258PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; InterPro IPR004477; KEGG: aco:Amico_1379 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related prot [...]
Tlie_1259 protein networkhttps://string-db.org/network/580340.Tlie_1259PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; COGs: COG1555 DNA uptake protein and related DNA-binding protein; [...]
miaB protein networkhttps://string-db.org/network/580340.Tlie_1260RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at [...]
Tlie_1261 protein networkhttps://string-db.org/network/580340.Tlie_1261KEGG: aco:Amico_1382 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1262 protein networkhttps://string-db.org/network/580340.Tlie_1262Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; C [...]
carA protein networkhttps://string-db.org/network/580340.Tlie_1263PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase [...]
Tlie_1264 protein networkhttps://string-db.org/network/580340.Tlie_1264Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0482 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_1265 protein networkhttps://string-db.org/network/580340.Tlie_1265InterPro IPR019140; KEGG: nhl:Nhal_4031 hypothetical protein; PFAM: Protein of unknown function DUF2044, membrane; SPTR: Putative uncharacterized protein; manually curated.
Tlie_1266 protein networkhttps://string-db.org/network/580340.Tlie_1266PFAM: Type III restriction enzyme, res subunit; COGs: COG3587 Restriction endonuclease; InterPro IPR006935; KEGG: cte:CT0911 type III restriction system endonuclease; PFAM: type III restriction p [...]
Tlie_1267 protein networkhttps://string-db.org/network/580340.Tlie_1267Site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase; COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002295: IPR002052: IPR002941; KEGG: bpt:Bpet4236 type II [...]
Tlie_1268 protein networkhttps://string-db.org/network/580340.Tlie_1268KEGG: dac:Daci_4206 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1269 protein networkhttps://string-db.org/network/580340.Tlie_1269PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR001650: IPR014021: IPR014001; KEGG: cte:CT0906 DN [...]
Tlie_1270 protein networkhttps://string-db.org/network/580340.Tlie_1270KEGG: tai:Taci_1497 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1271 protein networkhttps://string-db.org/network/580340.Tlie_1271UDP-galactose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509: IPR005886; KEGG: dth:DICT [...]
Tlie_1272 protein networkhttps://string-db.org/network/580340.Tlie_1272PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001131: IPR000587: IPR000994; KEGG: aco:Amico_1385 peptidase M24; PFAM [...]
Tlie_1273 protein networkhttps://string-db.org/network/580340.Tlie_1273PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728: IPR010918: IPR011854; KEGG [...]
Tlie_1274 protein networkhttps://string-db.org/network/580340.Tlie_1274Protein of unknown function DUF208; PFAM: Uncharacterized BCR, COG1636; COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: aco:Amico_1387 protein of unknown function DUF208; [...]
Tlie_1275 protein networkhttps://string-db.org/network/580340.Tlie_1275tRNA (adenine-N(1)-)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
Tlie_1276 protein networkhttps://string-db.org/network/580340.Tlie_1276Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003018: IPR006674: IPR003607; KEGG: ta [...]
Tlie_1277 protein networkhttps://string-db.org/network/580340.Tlie_1277Outer membrane transport energization protein TonB (TC 2.C.1.1.1); PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0810 Periplasmic protein TonB links [...]
Tlie_1278 protein networkhttps://string-db.org/network/580340.Tlie_1278PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: aco:Amico_0338 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transpo [...]
Tlie_1279 protein networkhttps://string-db.org/network/580340.Tlie_1279PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: slp:Slip_1460 periplasmic binding protein; PFAM: perip [...]
Tlie_1280 protein networkhttps://string-db.org/network/580340.Tlie_1280Outer membrane transport energization protein ExbB (TC 2.C.1.1.1); PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: aco:Amico_0339 [...]
Tlie_1281 protein networkhttps://string-db.org/network/580340.Tlie_1281Transketolase domain-containing protein; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0021 Transk [...]
Tlie_1282 protein networkhttps://string-db.org/network/580340.Tlie_1282PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886: IPR00769 [...]
Tlie_1283 protein networkhttps://string-db.org/network/580340.Tlie_1283Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
Tlie_1284 protein networkhttps://string-db.org/network/580340.Tlie_1284Amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: aco:Amico_1390 amino acid ca [...]
Tlie_1285 protein networkhttps://string-db.org/network/580340.Tlie_1285PFAM: Fatty acid synthesis protein; COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR003664: IPR012116; KEGG: aco:Amico_1391 fatty acid synthesis PlsX protein; PFAM: fatty a [...]
Tlie_1286 protein networkhttps://string-db.org/network/580340.Tlie_1286Betaine reductase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: tai:Taci_1135 betaine reductase; SPTR: Betaine reductase.
Tlie_1288 protein networkhttps://string-db.org/network/580340.Tlie_1288PFAM: Glycine reductase complex selenoprotein A; InterPro IPR006812; KEGG: aco:Amico_1395 glycine reductase complex selenoprotein A; PFAM: glycine reductase complex selenoprotein A; SPTR: Glycine [...]
Tlie_1289 protein networkhttps://string-db.org/network/580340.Tlie_1289PFAM: Glycine reductase complex selenoprotein A; InterPro IPR006812; KEGG: aco:Amico_1396 glycine reductase; PFAM: glycine reductase complex selenoprotein A; SPTR: Glycine reductase.
Tlie_1290 protein networkhttps://string-db.org/network/580340.Tlie_1290PFAM: Glycine/sarcosine/betaine reductase component B subunits; InterPro IPR015417: IPR016585; KEGG: tai:Taci_1138 glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; P [...]
Tlie_1291 protein networkhttps://string-db.org/network/580340.Tlie_1291Thioredoxin domain-containing protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766: IPR017936; KEGG: tai:Taci_1139 thioredoxin [...]
Tlie_1292 protein networkhttps://string-db.org/network/580340.Tlie_1292GrdX protein; KEGG: aco:Amico_1399 GrdX protein; SPTR: GrdX protein.
Tlie_1294 protein networkhttps://string-db.org/network/580340.Tlie_1294PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: aco:Amico_1400 sodium:neurotransmitter symporter; PFAM: sodium [...]
Tlie_1295 protein networkhttps://string-db.org/network/580340.Tlie_1295Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: pjd:Pjdr2_2471 nitrilase/cyanide hydrata [...]
Tlie_1296 protein networkhttps://string-db.org/network/580340.Tlie_1296PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; InterPro IPR001109; KEGG: aco:Amico_1401 hydrogenase assembly chaperone HypC/HupF; PFAM: hydrogenase expression/formatio [...]
Tlie_1297 protein networkhttps://string-db.org/network/580340.Tlie_1297PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: aco:Amico_1402 hydrogenase [...]
Tlie_1298 protein networkhttps://string-db.org/network/580340.Tlie_1298Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation pr [...]
Tlie_1299 protein networkhttps://string-db.org/network/580340.Tlie_1299TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; COGs: COG1692 conserved hypothetical protein; InterPro IPR004843: IPR005235; KEGG: aco:Amico_1404 metallophosphoesterase; PFAM: metallophos [...]
rny protein networkhttps://string-db.org/network/580340.Tlie_1300Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.
recX protein networkhttps://string-db.org/network/580340.Tlie_1301Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
recG protein networkhttps://string-db.org/network/580340.Tlie_1302ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
Tlie_1303 protein networkhttps://string-db.org/network/580340.Tlie_1303PFAM: DivIVA protein; TIGRFAM: DivIVA domain; InterPro IPR007793: IPR019933; KEGG: tai:Taci_1264 DivIVA family protein; PFAM: DivIVA family protein; SPTR: DivIVA family protein; TIGRFAM: DivIVA d [...]
Tlie_1304 protein networkhttps://string-db.org/network/580340.Tlie_1304Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
Tlie_1305 protein networkhttps://string-db.org/network/580340.Tlie_1305KEGG: aco:Amico_1411 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1306 protein networkhttps://string-db.org/network/580340.Tlie_1306PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related [...]
folE2 protein networkhttps://string-db.org/network/580340.Tlie_1307GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
Tlie_1308 protein networkhttps://string-db.org/network/580340.Tlie_1308PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synth [...]
Tlie_1309 protein networkhttps://string-db.org/network/580340.Tlie_1309PFAM: Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: gem:GM21_2030 protein of unknown function DUF72; PFAM: protein of unknown function [...]
Tlie_1310 protein networkhttps://string-db.org/network/580340.Tlie_1310Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
Tlie_1311 protein networkhttps://string-db.org/network/580340.Tlie_1311PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: clj:CLJU_c29750 NADPH-dependent FMN reductase-like protein; PFAM: NADPH-dependent FMN redu [...]
Tlie_1312 protein networkhttps://string-db.org/network/580340.Tlie_1312ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hyd [...]
Tlie_1313 protein networkhttps://string-db.org/network/580340.Tlie_1313PFAM: Aminotransferase class-V; COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR000192; KEGG: aco:Amico_1756 glycine dehydrogenase subunit 2; PF [...]
Tlie_1314 protein networkhttps://string-db.org/network/580340.Tlie_1314Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cof [...]
Tlie_1315 protein networkhttps://string-db.org/network/580340.Tlie_1315Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR0023 [...]
Tlie_1316 protein networkhttps://string-db.org/network/580340.Tlie_1316Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR0023 [...]
Tlie_1317 protein networkhttps://string-db.org/network/580340.Tlie_1317PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR003016: IPR011711; KEGG: aco:Amico_1763 transcriptional regulator, G [...]
Tlie_1318 protein networkhttps://string-db.org/network/580340.Tlie_1318PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: aco:Amico_ [...]
Tlie_1319 protein networkhttps://string-db.org/network/580340.Tlie_1319PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: aco:Amico_1416 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase.
Tlie_1320 protein networkhttps://string-db.org/network/580340.Tlie_1320Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
rplI protein networkhttps://string-db.org/network/580340.Tlie_1321Ribosomal protein L9; Binds to the 23S rRNA.
Tlie_1322 protein networkhttps://string-db.org/network/580340.Tlie_1322Protein of unknown function DUF2232, membrane; PFAM: Predicted membrane protein (DUF2232); COGs: COG4241 membrane protein; InterPro IPR018710; KEGG: aco:Amico_1419 protein of unknown function DUF [...]
rpsR protein networkhttps://string-db.org/network/580340.Tlie_1323SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial riboso [...]
Tlie_1324 protein networkhttps://string-db.org/network/580340.Tlie_1324PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: aco:Amico_1 [...]
rpsF protein networkhttps://string-db.org/network/580340.Tlie_1325Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
Tlie_1326 protein networkhttps://string-db.org/network/580340.Tlie_1326PFAM: Septum formation initiator; InterPro IPR007060; KEGG: aco:Amico_1423 hypothetical protein; PFAM: Septum formation initiator; SPTR: Putative uncharacterized protein.
argS protein networkhttps://string-db.org/network/580340.Tlie_1327arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA [...]
Tlie_1328 protein networkhttps://string-db.org/network/580340.Tlie_1328KEGG: aco:Amico_1425 hypothetical protein; SPTR: Putative uncharacterized protein.
secA protein networkhttps://string-db.org/network/580340.Tlie_1329Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
Tlie_1330 protein networkhttps://string-db.org/network/580340.Tlie_1330Tryptophanase; PFAM: Beta-eliminating lyase; COGs: COG3033 Tryptophanase; InterPro IPR001597: IPR011166; KEGG: tai:Taci_0642 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threon [...]
Tlie_1331 protein networkhttps://string-db.org/network/580340.Tlie_1331PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462: IP [...]
Tlie_1332 protein networkhttps://string-db.org/network/580340.Tlie_1332Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871 [...]
Tlie_1333 protein networkhttps://string-db.org/network/580340.Tlie_1333Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino [...]
Tlie_1334 protein networkhttps://string-db.org/network/580340.Tlie_1334Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport [...]
Tlie_1335 protein networkhttps://string-db.org/network/580340.Tlie_1335Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport [...]
Tlie_1338 protein networkhttps://string-db.org/network/580340.Tlie_1338Pyridoxal phosphate-dependent acyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier [...]
Tlie_1339 protein networkhttps://string-db.org/network/580340.Tlie_1339PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197: IPR012840; [...]
Tlie_1340 protein networkhttps://string-db.org/network/580340.Tlie_1340Ribonucleoside-triphosphate reductase class III catalytic subunit; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; [...]
nrdR protein networkhttps://string-db.org/network/580340.Tlie_1341ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
Tlie_1342 protein networkhttps://string-db.org/network/580340.Tlie_1342Protein of unknown function YOR215C; PFAM: Yqey-like protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: aco:Amico_1435 protein of unknown function YOR215C; SPTR: Put [...]
rpsU protein networkhttps://string-db.org/network/580340.Tlie_1343PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; InterPro IPR001911: IPR018278; KEGG: aco:Amico_1436 ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S2 [...]
Tlie_1344 protein networkhttps://string-db.org/network/580340.Tlie_1344Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310: IPR019808; KEGG: aco:Amico_1437 hist [...]
bpsA protein networkhttps://string-db.org/network/580340.Tlie_1345Protein of unknown function DUF43; Involved in the biosynthesis of branched-chain polyamines, which support the growth of thermophiles under high-temperature conditions. Catalyzes the sequential [...]
Tlie_1346 protein networkhttps://string-db.org/network/580340.Tlie_1346MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO fami [...]
Tlie_1347 protein networkhttps://string-db.org/network/580340.Tlie_1347Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
prmA protein networkhttps://string-db.org/network/580340.Tlie_1348(LSU ribosomal protein L11P)-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
dnaJ protein networkhttps://string-db.org/network/580340.Tlie_1349Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
dnaK protein networkhttps://string-db.org/network/580340.Tlie_1350Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
grpE protein networkhttps://string-db.org/network/580340.Tlie_1351GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleot [...]
hrcA protein networkhttps://string-db.org/network/580340.Tlie_1352Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
Tlie_1353 protein networkhttps://string-db.org/network/580340.Tlie_1353Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: dau:Daud_0321 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region.
Tlie_1354 protein networkhttps://string-db.org/network/580340.Tlie_1354PFAM: Phosphoglycerate mutase family; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR001345: IPR013078; KEGG: aco:Amico_1444 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: [...]
Tlie_1355 protein networkhttps://string-db.org/network/580340.Tlie_1355PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: aco:Amico_1237 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; [...]
Tlie_1356 protein networkhttps://string-db.org/network/580340.Tlie_1356Dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489: IPR006390; KEGG: tai:Taci_0619 dihydropteroat [...]
Tlie_1357 protein networkhttps://string-db.org/network/580340.Tlie_1357PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyr [...]
Tlie_1358 protein networkhttps://string-db.org/network/580340.Tlie_1358KEGG: aco:Amico_1447 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1359 protein networkhttps://string-db.org/network/580340.Tlie_1359PFAM: Heavy-metal-associated domain; InterPro IPR017969: IPR006121; KEGG: aco:Amico_1897 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: He [...]
Tlie_1360 protein networkhttps://string-db.org/network/580340.Tlie_1360PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamil [...]
Tlie_1361 protein networkhttps://string-db.org/network/580340.Tlie_1361KEGG: shn:Shewana3_2349 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1362 protein networkhttps://string-db.org/network/580340.Tlie_1362PFAM: Cytochrome C biogenesis protein transmembrane region; InterPro IPR003834; KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region; PFAM: cytochrome c biogenesis prote [...]
Tlie_1363 protein networkhttps://string-db.org/network/580340.Tlie_1363Hypothetical protein; PFAM: Hydrogenase expression/synthesis hypA family; KEGG: tai:Taci_1360 hypothetical protein; SPTR: Protein with rubredoxin/rubrerythrin domain protein.
Tlie_1364 protein networkhttps://string-db.org/network/580340.Tlie_1364PFAM: Carbon starvation protein CstA; COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR001917: IPR003706; KEGG: aco:Amico_1452 carbon starvation protein CstA; PFAM: [...]
Tlie_1365 protein networkhttps://string-db.org/network/580340.Tlie_1365KEGG: aco:Amico_1453 hypothetical protein; SPTR: Putative uncharacterized protein.
purA protein networkhttps://string-db.org/network/580340.Tlie_1366Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
Tlie_1367 protein networkhttps://string-db.org/network/580340.Tlie_1367Protein of unknown function DUF610 YibQ; PFAM: Divergent polysaccharide deacetylase; COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: aco:Amico_1455 protein of unknown func [...]
Tlie_1368 protein networkhttps://string-db.org/network/580340.Tlie_1368Carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005 [...]
Tlie_1369 protein networkhttps://string-db.org/network/580340.Tlie_1369PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: tai:Taci_0489 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23.
Tlie_1370 protein networkhttps://string-db.org/network/580340.Tlie_1370Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: tai:Taci_0488 protein of unknown function DUF214; PFAM: protein of unk [...]
Tlie_1371 protein networkhttps://string-db.org/network/580340.Tlie_1371PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR017871: IPR003439: IPR003593; KEGG: tai:Taci_0487 ABC transport [...]
Tlie_1372 protein networkhttps://string-db.org/network/580340.Tlie_1372Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG [...]
Tlie_1373 protein networkhttps://string-db.org/network/580340.Tlie_1373Transketolase domain-containing protein; PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: aco:Amico_1461 transke [...]
Tlie_1374 protein networkhttps://string-db.org/network/580340.Tlie_1374PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR019896; KEGG: aco:Amico_1462 polysaccharide p [...]
Tlie_1375 protein networkhttps://string-db.org/network/580340.Tlie_1375KEGG: aco:Amico_1463 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1376 protein networkhttps://string-db.org/network/580340.Tlie_1376Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into ce [...]
Tlie_1377 protein networkhttps://string-db.org/network/580340.Tlie_1377KEGG: aco:Amico_1465 hypothetical protein; SPTR: Putative uncharacterized protein.
uppP protein networkhttps://string-db.org/network/580340.Tlie_1378Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
rnj protein networkhttps://string-db.org/network/580340.Tlie_1381RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or d [...]
Tlie_1382 protein networkhttps://string-db.org/network/580340.Tlie_1382PFAM: Fructose-bisphosphate aldolase class-II; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771; KEGG: aco:Amico_0571 ketose-bisphosphate aldolase class-II; PFAM: ketose- [...]
Tlie_1383 protein networkhttps://string-db.org/network/580340.Tlie_1383Protein of unknown function UPF0027; PFAM: Uncharacterized protein family UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: glo:Glov_0158 protein of unknown functio [...]
speH-2 protein networkhttps://string-db.org/network/580340.Tlie_1384Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the [...]
Tlie_1385 protein networkhttps://string-db.org/network/580340.Tlie_1385Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_0459 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_1386 protein networkhttps://string-db.org/network/580340.Tlie_1386S-layer domain-containing protein; PFAM: Predicted periplasmic protein (DUF2233); COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acet [...]
Tlie_1387 protein networkhttps://string-db.org/network/580340.Tlie_1387PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: aco:Amico_0566 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensiti [...]
Tlie_1388 protein networkhttps://string-db.org/network/580340.Tlie_1388PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family; COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: hmo:HM1_0509 hypothetical protein [...]
Tlie_1389 protein networkhttps://string-db.org/network/580340.Tlie_1389PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461: IPR004770; KEGG: tai:Taci_1400 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporte [...]
Tlie_1390 protein networkhttps://string-db.org/network/580340.Tlie_1390KEGG: tai:Taci_1399 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1391 protein networkhttps://string-db.org/network/580340.Tlie_1391PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197: IPR003739; KEGG: aco:Amico_0 [...]
Tlie_1392 protein networkhttps://string-db.org/network/580340.Tlie_1392PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_1393 protein networkhttps://string-db.org/network/580340.Tlie_1393KEGG: pth:PTH_2566 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1394 protein networkhttps://string-db.org/network/580340.Tlie_13943H domain-containing protein; PFAM: HTH domain; 3H domain; COGs: COG1827 small molecule binding protein (contains 3H domain); InterPro IPR004173; KEGG: tna:CTN_0856 3H domain protein; PFAM: 3H do [...]
Tlie_1395 protein networkhttps://string-db.org/network/580340.Tlie_1395KEGG: tag:Tagg_0250 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1396 protein networkhttps://string-db.org/network/580340.Tlie_1396PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: oih:OB2242 pantothenate permease; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; Belo [...]
Tlie_1397 protein networkhttps://string-db.org/network/580340.Tlie_1397L-fuculose 1-phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epi [...]
Tlie_1398 protein networkhttps://string-db.org/network/580340.Tlie_1398PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: csc:Csac_0667 PhzF family phen [...]
Tlie_1399 protein networkhttps://string-db.org/network/580340.Tlie_1399PFAM: PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: gme:Gmet_3548 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptid [...]
Tlie_1400 protein networkhttps://string-db.org/network/580340.Tlie_1400Protein of unknown function DUF114; PFAM: Serine dehydrogenase proteinase; COGs: COG0616 Periplasmic serine protease (ClpP class); KEGG: aco:Amico_0564 protein of unknown function DUF114; SPTR: P [...]
Tlie_1401 protein networkhttps://string-db.org/network/580340.Tlie_1401ATPase AAA-2 domain protein; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities [...]
Tlie_1402 protein networkhttps://string-db.org/network/580340.Tlie_1402PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain; COGs: COG3869 Arginine kinase; InterPro IPR000749; KEGG: tai:Taci_1403 ATP:guanido phosphotransferase; PFAM: ATP:guanido phospho [...]
Tlie_1403 protein networkhttps://string-db.org/network/580340.Tlie_1403PFAM: UvrB/uvrC motif; COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: bmd:BMD_0103 modulator of CtsR repression, McsA; PFAM: UvrB/UvrC protein; SPTR: U [...]
Tlie_1404 protein networkhttps://string-db.org/network/580340.Tlie_1404Transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); COGs: COG4463 Transcriptional repressor of class III stress genes; InterPro IPR008463; [...]
plsY protein networkhttps://string-db.org/network/580340.Tlie_1405Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilize [...]
Tlie_1406 protein networkhttps://string-db.org/network/580340.Tlie_1406CoA-binding domain protein; PFAM: CoA binding domain; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR003781: IPR013650: IPR011761; KEGG: tai:Taci_1407 CoA-binding domain protein; PF [...]
Tlie_1407 protein networkhttps://string-db.org/network/580340.Tlie_1407PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR018211: IPR001670; KEGG: pth:PTH_0851 alcohol dehydrogenase; PFAM: iron-containing alcohol d [...]
Tlie_1408 protein networkhttps://string-db.org/network/580340.Tlie_1408ErfK/YbiS/YcfS/YnhG family protein; PFAM: L,D-transpeptidase catalytic domain; COGs: COG1376 conserved hypothetical protein; InterPro IPR005490; KEGG: aco:Amico_0482 ErfK/YbiS/YcfS/YnhG family pr [...]
Tlie_1409 protein networkhttps://string-db.org/network/580340.Tlie_1409Hypothetical protein; KEGG: ske:Sked_17430 CDP-diacylglycerol inositol 3-phosphatidyltransferase; SPTR: CDP-diacylglycerol inositol 3-phosphatidyltransferase.
Tlie_1410 protein networkhttps://string-db.org/network/580340.Tlie_1410PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F; COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647: IPR001567: IPR004438; KEGG: cth:Cthe_2452 oligopeptidase F; PFA [...]
Tlie_1412 protein networkhttps://string-db.org/network/580340.Tlie_1412PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_1413 protein networkhttps://string-db.org/network/580340.Tlie_1413PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: aco:Amico_0151 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane di [...]
Tlie_1414 protein networkhttps://string-db.org/network/580340.Tlie_1414Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: aco:Amico_0353 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: Lytic [...]
Tlie_1415 protein networkhttps://string-db.org/network/580340.Tlie_1415KEGG: aco:Amico_0373 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1416 protein networkhttps://string-db.org/network/580340.Tlie_1416KEGG: aco:Amico_0372 hypothetical protein.
Tlie_1417 protein networkhttps://string-db.org/network/580340.Tlie_1417PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006224: IPR006145; KEGG: lhk:LHK_00078 pseud [...]
Tlie_1419 protein networkhttps://string-db.org/network/580340.Tlie_1419Auxin Efflux Carrier; PFAM: Membrane transport protein; COGs: COG0679 permease; InterPro IPR004776; KEGG: aco:Amico_0420 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carri [...]
rplS protein networkhttps://string-db.org/network/580340.Tlie_1420LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
trmD protein networkhttps://string-db.org/network/580340.Tlie_1421tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rimM protein networkhttps://string-db.org/network/580340.Tlie_142216S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
Tlie_1423 protein networkhttps://string-db.org/network/580340.Tlie_1423Hypothetical protein; PFAM: KH domain; COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: aco:Amico_0553 hypothetical protein; SPTR: Putative uncharacterized protein; Belongs to the UP [...]
rpsP protein networkhttps://string-db.org/network/580340.Tlie_1424PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0228 Ribosomal protein S16; InterPro IPR020592: IPR000307; KEGG: tai:Taci_1417 ribosomal protein S16; PFAM: ribosomal protein [...]
ffh protein networkhttps://string-db.org/network/580340.Tlie_1425Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of [...]
Tlie_1426 protein networkhttps://string-db.org/network/580340.Tlie_1426Helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. Ma [...]
Tlie_1427 protein networkhttps://string-db.org/network/580340.Tlie_1427KEGG: aco:Amico_1551 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1428 protein networkhttps://string-db.org/network/580340.Tlie_1428Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556; InterPro IPR009501; KEGG: aco:Amico_0549 protein of unknown function DUF1121; SPTR: Putative uncharacterized protein.
Tlie_1429 protein networkhttps://string-db.org/network/580340.Tlie_1429PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445: IPR004772; KEGG: aco:Amico_128 [...]
Tlie_1430 protein networkhttps://string-db.org/network/580340.Tlie_1430PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR006036: IPR001917: IPR003148: IPR006037; KEGG: aco:Amico_1287 TrkA-N domain protein; PFAM [...]
Tlie_1431 protein networkhttps://string-db.org/network/580340.Tlie_1431Asparaginase/glutaminase; PFAM: Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: aco:Amico_0548 asparaginase/glutaminase; PFAM: Aspara [...]
Tlie_1432 protein networkhttps://string-db.org/network/580340.Tlie_1432Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: tle:Tlet_1369 hypothetical protein; PFAM: protein of unknown function DUF81; [...]
Tlie_1433 protein networkhttps://string-db.org/network/580340.Tlie_1433PFAM: Domain of unknown function (DUF296); COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: aco:Amico_0546 protein of unknown function DUF296; PFAM: pr [...]
Tlie_1434 protein networkhttps://string-db.org/network/580340.Tlie_1434PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214; KEGG: aco:Amico_0545 YbaK/prolyl-tRNA synthet [...]
Tlie_1435 protein networkhttps://string-db.org/network/580340.Tlie_1435PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; Inter [...]
Tlie_1436 protein networkhttps://string-db.org/network/580340.Tlie_1436Triphosphoribosyl-dephospho-CoA synthase; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; COGs: COG1767 Triphosphoribosyl-dephospho- [...]
Tlie_1437 protein networkhttps://string-db.org/network/580340.Tlie_1437Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: aco:Amico_0543 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-h [...]
Tlie_1438 protein networkhttps://string-db.org/network/580340.Tlie_1438PFAM: Radical SAM superfamily; COGs: COG1243 Histone acetyltransferase; InterPro IPR007197: IPR006638; KEGG: aco:Amico_0542 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: El [...]
Tlie_1439 protein networkhttps://string-db.org/network/580340.Tlie_1439PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: swo:Swol_1820 Na+-driven multidrug efflux pump-like protein; P [...]
Tlie_1440 protein networkhttps://string-db.org/network/580340.Tlie_1440PFAM: SIS domain; Helix-turn-helix domain, rpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281: IPR001347; KEGG: tai:Taci_0584 transcriptional regulator, RpiR family; PFAM: [...]
Tlie_1441 protein networkhttps://string-db.org/network/580340.Tlie_1441Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: tnp:Tnap_1607 beta-lactamase domain protein; SPTR: [...]
Tlie_1442 protein networkhttps://string-db.org/network/580340.Tlie_1442Hypothetical protein; KEGG: mmu:380698 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF; SPTR: Putative uncharacterized protein.
aspS protein networkhttps://string-db.org/network/580340.Tlie_1443aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
hisS protein networkhttps://string-db.org/network/580340.Tlie_1444PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR002314: IPR004154: I [...]
Tlie_1445 protein networkhttps://string-db.org/network/580340.Tlie_1445PFAM: Stage V sporulation protein S (SpoVS); COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: aco:Amico_0537 stage V sporulation protein S; PFAM: Stage V sporulation protei [...]
Tlie_1446 protein networkhttps://string-db.org/network/580340.Tlie_1446PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_1447 protein networkhttps://string-db.org/network/580340.Tlie_1447Putative signal transduction protein with CBS domains; PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: tai:Taci_0825 putative signal transduction prot [...]
Tlie_1448 protein networkhttps://string-db.org/network/580340.Tlie_1448KEGG: hsl:OE4467F hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1449 protein networkhttps://string-db.org/network/580340.Tlie_1449UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594; KEGG: tai: [...]
Tlie_1450 protein networkhttps://string-db.org/network/580340.Tlie_1450PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: drm:Dred_0416 regulatory proteins, IclR; PFA [...]
glnS protein networkhttps://string-db.org/network/580340.Tlie_1451PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; COGs: COG0008 Glutamyl- and glutami [...]
Tlie_1452 protein networkhttps://string-db.org/network/580340.Tlie_1452Hypothetical protein; KEGG: tjr:TherJR_2367 glycogen/starch synthase, ADP-glucose type; SPTR: Putative uncharacterized protein.
Tlie_1453 protein networkhttps://string-db.org/network/580340.Tlie_1453Hypothetical protein; PFAM: D-aminoacyl-tRNA deacylase; KEGG: cdf:CD0353 hypothetical protein; SPTR: Putative uncharacterized protein.
proC protein networkhttps://string-db.org/network/580340.Tlie_1454Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
Tlie_1455 protein networkhttps://string-db.org/network/580340.Tlie_1455KEGG: aco:Amico_0379 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1456 protein networkhttps://string-db.org/network/580340.Tlie_1456PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR018093: IPR000060; KEGG: fma:FMG_1469 glycine betaine t [...]
Tlie_1457 protein networkhttps://string-db.org/network/580340.Tlie_1457TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; InterPro IPR010187; KEGG: clj:CLJU_c27350 glycine reductase complex component B subunit gamma; SPTR: Selenoprotein [...]
Tlie_1459 protein networkhttps://string-db.org/network/580340.Tlie_1459PFAM: Glycine/sarcosine/betaine reductase component B subunits; InterPro IPR015417; KEGG: clj:CLJU_c27840 glycine reductase complex component B subunit alpha; PFAM: Glycine/sarcosine/betaine redu [...]
Tlie_1460 protein networkhttps://string-db.org/network/580340.Tlie_1460PFAM: Glycine reductase complex selenoprotein A; InterPro IPR006812; KEGG: aco:Amico_1395 glycine reductase complex selenoprotein A; PFAM: glycine reductase complex selenoprotein A; SPTR: Glycine [...]
Tlie_1461 protein networkhttps://string-db.org/network/580340.Tlie_1461PFAM: Glycine reductase complex selenoprotein A; InterPro IPR006812; KEGG: dds:Ddes_0118 glycine/sarcosine/betaine reductase complex protein A; PFAM: glycine reductase complex selenoprotein A; SP [...]
Tlie_1462 protein networkhttps://string-db.org/network/580340.Tlie_1462Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like [...]
Tlie_1463 protein networkhttps://string-db.org/network/580340.Tlie_1463PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR004358: IPR003594: IPR005467; K [...]
Tlie_1464 protein networkhttps://string-db.org/network/580340.Tlie_1464NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur [...]
Tlie_1465 protein networkhttps://string-db.org/network/580340.Tlie_1465Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NAD [...]
Tlie_1466 protein networkhttps://string-db.org/network/580340.Tlie_1466Hypothetical protein; KEGG: ote:Oter_1545 NADH dehydrogenase (quinone); SPTR: Putative NADH:ubiquinone oxidoreductase, NADH-binding subunit F.
Tlie_1467 protein networkhttps://string-db.org/network/580340.Tlie_1467PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit; PFAM: N [...]
Tlie_1468 protein networkhttps://string-db.org/network/580340.Tlie_1468TIGRFAM: lysine biosynthesis protein LysW; InterPro IPR005906; KEGG: tai:Taci_0443 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: lysine biosynthesis protein LysW.
Tlie_1469 protein networkhttps://string-db.org/network/580340.Tlie_1469L-2-aminoadipate N-acetyltransferase; PFAM: RimK-like ATP-grasp domain; TIGRFAM: Lysine biosynthesis enzyme LysX; alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Riboso [...]
argC protein networkhttps://string-db.org/network/580340.Tlie_1470N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
Tlie_1471 protein networkhttps://string-db.org/network/580340.Tlie_1471N2-acetyl-L-aminoadipate kinase, N-acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001057: IPR001048: IP [...]
Tlie_1472 protein networkhttps://string-db.org/network/580340.Tlie_1472PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: tai:Taci_0450 aminotransferase class-III; PFAM: aminotransferase class-III; S [...]
Tlie_1473 protein networkhttps://string-db.org/network/580340.Tlie_1473Acetylornithine deacetylase, N2-acetyl-L-lysine deacetylase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; COGs: COG0624 Acetylornithine deacetylase [...]
Tlie_1476 protein networkhttps://string-db.org/network/580340.Tlie_1476PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: dba:Dbac_2014 aminotransferase class I and II; PFAM: aminotransferase [...]
Tlie_1477 protein networkhttps://string-db.org/network/580340.Tlie_1477Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR020826: IPR005475: IPR0 [...]
Tlie_1478 protein networkhttps://string-db.org/network/580340.Tlie_1478Transketolase domain-containing protein; PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: dae:Dtox_3968 transket [...]
Tlie_1479 protein networkhttps://string-db.org/network/580340.Tlie_1479PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: t [...]
glyA protein networkhttps://string-db.org/network/580340.Tlie_1480Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major s [...]
Tlie_1481 protein networkhttps://string-db.org/network/580340.Tlie_1481Protein of unknown function DUF2284, metal-binding protein; PFAM: Predicted metal-binding protein (DUF2284); COGs: COG5423 metal-binding protein; InterPro IPR019271; KEGG: gsu:GSU0751 hypothetica [...]
Tlie_1482 protein networkhttps://string-db.org/network/580340.Tlie_1482PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: acp:A2cp1_1052 prot [...]
crcB protein networkhttps://string-db.org/network/580340.Tlie_1483Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
Tlie_1484 protein networkhttps://string-db.org/network/580340.Tlie_1484Protein of unknown function DUF190; PFAM: Uncharacterized ACR, COG1993; COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: nwa:Nwat_2116 hypothetical protein; PFAM: protein o [...]
Tlie_1485 protein networkhttps://string-db.org/network/580340.Tlie_1485Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Sig [...]
Tlie_1486 protein networkhttps://string-db.org/network/580340.Tlie_1486Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consistin [...]
Tlie_1487 protein networkhttps://string-db.org/network/580340.Tlie_1487KEGG: cro:ROD_13141 spheroplast protein Y; SPTR: Spheroplast protein Y.
Tlie_1488 protein networkhttps://string-db.org/network/580340.Tlie_1488KEGG: tai:Taci_1481 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1489 protein networkhttps://string-db.org/network/580340.Tlie_1489PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545: IPR001650: IPR014021: IPR014001; KEGG: aco:Amico_0350 DE [...]
Tlie_1490 protein networkhttps://string-db.org/network/580340.Tlie_1490UspA domain-containing protein; PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006015: IPR006016; KEGG: aco [...]
atpB-3 protein networkhttps://string-db.org/network/580340.Tlie_1491H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
atpA-3 protein networkhttps://string-db.org/network/580340.Tlie_1492Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/b [...]
Tlie_1493 protein networkhttps://string-db.org/network/580340.Tlie_1493H+transporting two-sector ATPase E subunit; PFAM: ATP synthase (E/31 kDa) subunit; InterPro IPR000533: IPR002842; KEGG: tai:Taci_0518 hypothetical protein; PFAM: H+transporting two-sector ATPase [...]
Tlie_1494 protein networkhttps://string-db.org/network/580340.Tlie_1494PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: tai:Taci_0519 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR [...]
Tlie_1495 protein networkhttps://string-db.org/network/580340.Tlie_1495H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR000454: IPR002379; KEGG: tai:Taci_0520 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-s [...]
Tlie_1496 protein networkhttps://string-db.org/network/580340.Tlie_1496PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: tai:Taci_0521 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: Put [...]
Tlie_1497 protein networkhttps://string-db.org/network/580340.Tlie_1497PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: tai:Taci_0522 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector [...]
Tlie_1498 protein networkhttps://string-db.org/network/580340.Tlie_1498KEGG: tai:Taci_0523 ATP synthase F0, B subunit; SPTR: Putative H(+)-transporting two-sector ATPase subunit H.a.
atpD-2 protein networkhttps://string-db.org/network/580340.Tlie_1499V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
Tlie_1500 protein networkhttps://string-db.org/network/580340.Tlie_1500PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: drm:Dred_2187 GntR domain-containing protein; PFAM: Gn [...]
Tlie_1501 protein networkhttps://string-db.org/network/580340.Tlie_1501DctQ (C4-dicarboxylate permease, small subunit); PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; KEGG: drt:Dret_0071 DctQ (C4-dicarboxylate permease, small subunit); SP [...]
Tlie_1503 protein networkhttps://string-db.org/network/580340.Tlie_1503Integrase catalytic region; PFAM: Integrase core domain; InterPro IPR001584; KEGG: adg:Adeg_1238 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region.
Tlie_1504 protein networkhttps://string-db.org/network/580340.Tlie_1504PFAM: NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; InterPro IPR003421; KEGG: aco:Amico_1250 NAD/NADP octopine/nopaline dehydrogenase; PFAM: NAD/NADP octopine/nopaline dehydroge [...]
Tlie_1505 protein networkhttps://string-db.org/network/580340.Tlie_1505PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dps:DP0483 DctP (peripla [...]
Tlie_1506 protein networkhttps://string-db.org/network/580340.Tlie_1506PFAM: NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro IPR011128: IPR003421; KEGG: aco:Amico_1250 NAD/NADP oct [...]
Tlie_1507 protein networkhttps://string-db.org/network/580340.Tlie_1507PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: gtn:GTNG_2270 cystathionine gamma-synthase; PFAM: Cys [...]
Tlie_1508 protein networkhttps://string-db.org/network/580340.Tlie_1508PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485: IPR019885: IPR019887: IPR019888; KEGG: sus:Acid_5211 AsnC family transcriptional regulator; PFAM: Transcription re [...]
tpx protein networkhttps://string-db.org/network/580340.Tlie_1509Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays [...]
Tlie_1510 protein networkhttps://string-db.org/network/580340.Tlie_1510Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: aco:Amico_0463 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphata [...]
Tlie_1511 protein networkhttps://string-db.org/network/580340.Tlie_1511PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_1512 protein networkhttps://string-db.org/network/580340.Tlie_1512Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR001110: IPR003010; KEGG: pjd:Pjdr2_2471 nitrilase/cyan [...]
Tlie_1513 protein networkhttps://string-db.org/network/580340.Tlie_1513PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; InterPro IPR006683: IPR003736; KEGG: aco:Amico_0051 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SP [...]
Tlie_1514 protein networkhttps://string-db.org/network/580340.Tlie_1514PFAM: Protein of unknown function (DUF2703); KEGG: tai:Taci_0553 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1515 protein networkhttps://string-db.org/network/580340.Tlie_1515PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: aco:Amico_0438 ATP/cobalamin [...]
Tlie_1516 protein networkhttps://string-db.org/network/580340.Tlie_1516PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: aco:Amico_0437 transcriptional regulator, GntR family; [...]
Tlie_1517 protein networkhttps://string-db.org/network/580340.Tlie_1517Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: tai:Taci_0550 protein of unknown function DUF6 transmembrane; PFAM: protein of unknow [...]
Tlie_1518 protein networkhttps://string-db.org/network/580340.Tlie_1518Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: tai:Taci_0549 protein of unknown function DUF218; PFAM: protein of [...]
Tlie_1519 protein networkhttps://string-db.org/network/580340.Tlie_1519AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); COGs: COG2256 ATPase related to the helicase subunit of the [...]
Tlie_1522 protein networkhttps://string-db.org/network/580340.Tlie_1522Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dth:DICTH_1642 GGDEF domain; PFAM: GGDEF domain co [...]
Tlie_1523 protein networkhttps://string-db.org/network/580340.Tlie_1523PFAM: Family of unknown function (DUF500); COGs: COG2930 conserved hypothetical protein; KEGG: aco:Amico_0431 protein of unknown function DUF500; SPTR: Putative uncharacterized protein.
Tlie_1524 protein networkhttps://string-db.org/network/580340.Tlie_1524Hypothetical protein; PFAM: Dienelactone hydrolase family; KEGG: aco:Amico_0263 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1525 protein networkhttps://string-db.org/network/580340.Tlie_1525PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627: [...]
Tlie_1526 protein networkhttps://string-db.org/network/580340.Tlie_1526UspA domain-containing protein; PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: aco [...]
Tlie_1527 protein networkhttps://string-db.org/network/580340.Tlie_1527KEGG: tai:Taci_0537 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1528 protein networkhttps://string-db.org/network/580340.Tlie_1528Protein of unknown function DUF2179; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); COGs: COG1284 conserved hypothetical protein; InterPr [...]
Tlie_1529 protein networkhttps://string-db.org/network/580340.Tlie_1529PFAM: D-aminopeptidase; COGs: COG2362 D-aminopeptidase; InterPro IPR007035; KEGG: aco:Amico_1651 peptidase M55 D-aminopeptidase; PFAM: peptidase M55 D-aminopeptidase; SPTR: Peptidase M55 D-aminop [...]
Tlie_1530 protein networkhttps://string-db.org/network/580340.Tlie_1530PFAM: NADH:flavin oxidoreductase / NADH oxidase family; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: tai:Taci_0533 NADH:flavin oxidoreductase/NADH [...]
ychF protein networkhttps://string-db.org/network/580340.Tlie_1531GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
Tlie_1532 protein networkhttps://string-db.org/network/580340.Tlie_1532PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: gwc:GWCH70_1766 transposase mutator type; PFAM: transposase mutator type; SPTR: [...]
Tlie_1533 protein networkhttps://string-db.org/network/580340.Tlie_1533KEGG: aco:Amico_0428 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
Tlie_1534 protein networkhttps://string-db.org/network/580340.Tlie_1534PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: aco:Amico_0020 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulato [...]
Tlie_1535 protein networkhttps://string-db.org/network/580340.Tlie_1535Hypothetical protein; KEGG: oaa:100083867 similar to P-selectin; SPTR: GL15841; manually curated.
Tlie_1536 protein networkhttps://string-db.org/network/580340.Tlie_1536PFAM: Dinitrogenase iron-molybdenum cofactor; COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: tai:Taci_0393 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PF [...]
Tlie_1537 protein networkhttps://string-db.org/network/580340.Tlie_1537PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896: IPR017900; K [...]
Tlie_1538 protein networkhttps://string-db.org/network/580340.Tlie_1538Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896: [...]
Tlie_1539 protein networkhttps://string-db.org/network/580340.Tlie_1539Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
Tlie_1540 protein networkhttps://string-db.org/network/580340.Tlie_1540PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: aco [...]
Tlie_1541 protein networkhttps://string-db.org/network/580340.Tlie_1541PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: aco:Amico_ [...]
Tlie_1542 protein networkhttps://string-db.org/network/580340.Tlie_1542PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate [...]
Tlie_1543 protein networkhttps://string-db.org/network/580340.Tlie_1543ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Tlie_1544 protein networkhttps://string-db.org/network/580340.Tlie_1544PFAM: Dinitrogenase iron-molybdenum cofactor; COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: aco:Amico_0015 dinitrogenase iron-molybdenum cofactor biosynthesis protein; P [...]
Tlie_1545 protein networkhttps://string-db.org/network/580340.Tlie_1545FeoA family protein; PFAM: FeoA domain; InterPro IPR007167; KEGG: aco:Amico_0215 FeoA family protein; PFAM: FeoA family protein; SPTR: FeoA family protein.
Tlie_1546 protein networkhttps://string-db.org/network/580340.Tlie_1546Small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: small GTP-binding protein domain; COGs: COG0370 Fe [...]
Tlie_1547 protein networkhttps://string-db.org/network/580340.Tlie_1547PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: rci:RRC303 ABC-type transport system [...]
Tlie_1548 protein networkhttps://string-db.org/network/580340.Tlie_1548Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: dps:DP0215 Fe(III) ABC-tran [...]
Tlie_1549 protein networkhttps://string-db.org/network/580340.Tlie_1549PFAM: RNase H; COGs: COG0328 Ribonuclease HI; InterPro IPR002156: IPR007527; KEGG: aco:Amico_1783 ribonuclease H; PFAM: ribonuclease H; SPTR: Ribonuclease H.
Tlie_1550 protein networkhttps://string-db.org/network/580340.Tlie_1550KEGG: cbe:Cbei_4765 cell wall binding repeat-containing protein; SPTR: Putative uncharacterized protein.
Tlie_1551 protein networkhttps://string-db.org/network/580340.Tlie_1551PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_1552 protein networkhttps://string-db.org/network/580340.Tlie_1552PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106: IPR001342: IPR019811; KEGG: aco:Amico_0491 homoserine deh [...]
Tlie_1553 protein networkhttps://string-db.org/network/580340.Tlie_1553PFAM: Bacterial regulatory proteins, lacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: aco:Amico_0424 transcriptional regulator, LacI family; PFAM: regul [...]
Tlie_1554 protein networkhttps://string-db.org/network/580340.Tlie_1554AAA ATPase; PFAM: Phosphoribulokinase / Uridine kinase family; COGs: COG0572 Uridine kinase; InterPro IPR000764: IPR003593; KEGG: tai:Taci_1361 AAA ATPase; SMART: AAA ATPase; SPTR: AAA ATPase.
Tlie_1555 protein networkhttps://string-db.org/network/580340.Tlie_1555PFAM: Rhodanese-like domain; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tai:Taci_1275 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese [...]
Tlie_1556 protein networkhttps://string-db.org/network/580340.Tlie_1556PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: aco:Amico_ [...]
Tlie_1557 protein networkhttps://string-db.org/network/580340.Tlie_1557PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439: IPR0 [...]
Tlie_1558 protein networkhttps://string-db.org/network/580340.Tlie_1558PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: aco [...]
Tlie_1559 protein networkhttps://string-db.org/network/580340.Tlie_1559Hypothetical protein; KEGG: aco:Amico_0035 putative TetR family transcriptional regulator; SPTR: Putative TetR family transcriptional regulator.
Tlie_1560 protein networkhttps://string-db.org/network/580340.Tlie_1560GntR domain protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: tai:Taci_1362 GntR domain protein [...]
Tlie_1561 protein networkhttps://string-db.org/network/580340.Tlie_1561Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; InterPro IPR006675: IPR006674; KEGG: tai:Taci_1363 metal dependent phosphohydrolase; PFAM: metal-dependent [...]
Tlie_1562 protein networkhttps://string-db.org/network/580340.Tlie_1562PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; COGs: COG0065 3-isopropylmalate dehydratase large subu [...]
leuD-2 protein networkhttps://string-db.org/network/580340.Tlie_15633-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
leuC-2 protein networkhttps://string-db.org/network/580340.Tlie_1564Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
leuD-3 protein networkhttps://string-db.org/network/580340.Tlie_15653-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
Tlie_1566 protein networkhttps://string-db.org/network/580340.Tlie_1566PFAM: Isocitrate/isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: tai:Taci_1368 3-isopropylmalate dehydrogenase; PFAM: i [...]
Tlie_1567 protein networkhttps://string-db.org/network/580340.Tlie_1567Citrate lyase acyl carrier protein; PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein; InterPro IPR006495; KEGG: tai:Taci_1369 citrate lyase acyl carr [...]
Tlie_1568 protein networkhttps://string-db.org/network/580340.Tlie_1568Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit; COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR011206; KEGG: tai:Taci_1370 [...]
Tlie_1569 protein networkhttps://string-db.org/network/580340.Tlie_1569PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: tai:Taci_1371 citrate lyase, alpha subunit; [...]
Tlie_1570 protein networkhttps://string-db.org/network/580340.Tlie_1570DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; COGs: COG1205 Distinct helicase family with a uniq [...]
Tlie_1571 protein networkhttps://string-db.org/network/580340.Tlie_1571Hypothetical protein; COGs: COG3359 exonuclease; KEGG: bmq:BMQ_1429 hypothetical protein; SPTR: Putative exonuclease.
Tlie_1572 protein networkhttps://string-db.org/network/580340.Tlie_1572Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomut [...]
Tlie_1573 protein networkhttps://string-db.org/network/580340.Tlie_1573PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: tra:Trad_0292 NAD-dependent epimerase/dehydratase; PFA [...]
Tlie_1574 protein networkhttps://string-db.org/network/580340.Tlie_1574PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; COGs: COG1882 Pyruvate-formate lyase; InterPro IPR010098: IPR001150: IPR004184; KEGG: pdi:BDI_0786 formate C-acetyl [...]
Tlie_1575 protein networkhttps://string-db.org/network/580340.Tlie_1575PFAM: 4Fe-4S binding domain; Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterProIPR012839: IPR01789 [...]
Tlie_1576 protein networkhttps://string-db.org/network/580340.Tlie_1576PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: tai:Taci_1439 transcriptional regulator, GntR family; [...]
Tlie_1577 protein networkhttps://string-db.org/network/580340.Tlie_1577PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: tai [...]
Tlie_1578 protein networkhttps://string-db.org/network/580340.Tlie_1578PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; KEGG: tai:Taci_1442 TRAP-type C4-dic [...]
Tlie_1579 protein networkhttps://string-db.org/network/580340.Tlie_1579PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: tai:Taci_1443 TRAP dicar [...]
Tlie_1580 protein networkhttps://string-db.org/network/580340.Tlie_1580PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR005131: IPR0 [...]
Tlie_1581 protein networkhttps://string-db.org/network/580340.Tlie_1581PFAM: Ornithine cyclodeaminase/mu-crystallin family; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: cbf:CLI_2638 ornithine cyclodeaminase; PFAM: ornithine [...]
Tlie_1582 protein networkhttps://string-db.org/network/580340.Tlie_1582PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: drm:Dred_1730 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreduct [...]
Tlie_1583 protein networkhttps://string-db.org/network/580340.Tlie_1583PFAM: Proline racemase; COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: tai:Taci_0460 proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: Proline racemase; Belongs [...]
Tlie_1584 protein networkhttps://string-db.org/network/580340.Tlie_1584Hypothetical protein; KEGG: pfh:PFHG_00849 conserved hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1585 protein networkhttps://string-db.org/network/580340.Tlie_1585Hypothetical protein; KEGG: lbf:LBF_1225 peptidase inhibitor-like protein; SPTR: Putative uncharacterized protein.
Tlie_1586 protein networkhttps://string-db.org/network/580340.Tlie_1586Hypothetical protein; KEGG: ser:SERP1492 accessory gene regulator protein C; SPTR: Putative uncharacterized protein.
Tlie_1587 protein networkhttps://string-db.org/network/580340.Tlie_1587Hypothetical protein.
Tlie_1588 protein networkhttps://string-db.org/network/580340.Tlie_1588KEGG: dak:DaAHT2_0192 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1589 protein networkhttps://string-db.org/network/580340.Tlie_1589Peptidase M20; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933; KEGG: tai:Taci_0160 amidohydrolase; PFAM: peptidase M20; SPTR: Amidohydrolase; Belongs to t [...]
Tlie_1590 protein networkhttps://string-db.org/network/580340.Tlie_1590PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166: IPR006094: IPR00411 [...]
Tlie_1591 protein networkhttps://string-db.org/network/580340.Tlie_1591PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731: IPR00130 [...]
Tlie_1592 protein networkhttps://string-db.org/network/580340.Tlie_1592PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730: IPR012255; KEGG: kol:Kole_1998 electron transfer flavoprotein alpha/bet [...]
Tlie_1593 protein networkhttps://string-db.org/network/580340.Tlie_1593GTP-binding protein TypA; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding p [...]
Tlie_1594 protein networkhttps://string-db.org/network/580340.Tlie_1594Diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like recei [...]
Tlie_1595 protein networkhttps://string-db.org/network/580340.Tlie_15954Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017896: IPR017900; KEGG: mmh:Mmah_0049 4Fe-4S ferredoxin iron-sulfur binding domain p [...]
Tlie_1596 protein networkhttps://string-db.org/network/580340.Tlie_1596Hypothetical protein.
Tlie_1597 protein networkhttps://string-db.org/network/580340.Tlie_1597Hypothetical protein.
Tlie_1598 protein networkhttps://string-db.org/network/580340.Tlie_1598PFAM: Sodium:solute symporter family; COGs: COG4145 Na+/panthothenate symporter; InterPro IPR001734; KEGG: dds:Ddes_1291 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symport [...]
clpB protein networkhttps://string-db.org/network/580340.Tlie_1599ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belong [...]
Tlie_1600 protein networkhttps://string-db.org/network/580340.Tlie_1600PFAM: DnaJ C terminal region; DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623: IPR002939: IPR003095: IPR018253; KEGG: drt:Dret_1856 [...]
dnaK-2 protein networkhttps://string-db.org/network/580340.Tlie_1601Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
Tlie_1602 protein networkhttps://string-db.org/network/580340.Tlie_1602KEGG: aco:Amico_1798 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1603 protein networkhttps://string-db.org/network/580340.Tlie_1603PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; COGs: COG0442 Prolyl-tRNA synthetase; InterPro IPR007214: IPR004154; KEGG: aco:Amico_0080 YbaK/prolyl-tRNA synthe [...]
Tlie_1604 protein networkhttps://string-db.org/network/580340.Tlie_1604Hypothetical protein; InterPro IPR002052; KEGG: aco:Amico_1233 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1605 protein networkhttps://string-db.org/network/580340.Tlie_1605Transcriptional regulator, CdaR; PFAM: Purine catabolism regulatory protein-like family; COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR012914; KEGG: tai:Taci_0407 transcriptional [...]
Tlie_1606 protein networkhttps://string-db.org/network/580340.Tlie_1606Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: amt:Amet_0691 nitrilase/cyanide hydratas [...]
Tlie_1607 protein networkhttps://string-db.org/network/580340.Tlie_1607PFAM: Short chain fatty acid transporter; TIGRFAM: TIGR00366 family protein; COGs: COG2031 Short chain fatty acids transporter; InterPro IPR006160; KEGG: tle:Tlet_1558 short chain fatty acid tran [...]
Tlie_1608 protein networkhttps://string-db.org/network/580340.Tlie_1608L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: aoe:Clos_0876 formyl-C [...]
Tlie_1609 protein networkhttps://string-db.org/network/580340.Tlie_1609KEGG: dra:DR_1069 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1610 protein networkhttps://string-db.org/network/580340.Tlie_1610PFAM: Protein of unknown function (DUF1458); COGs: COG3360 conserved hypothetical protein; InterPro IPR009923; KEGG: nmu:Nmul_A2249 hypothetical protein; PFAM: protein of unknown function DUF1458 [...]
Tlie_1611 protein networkhttps://string-db.org/network/580340.Tlie_1611Hypothetical protein.
Tlie_1612 protein networkhttps://string-db.org/network/580340.Tlie_1612Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: ccv:CCV52592_1837 DnaJ domain-c [...]
Tlie_1613 protein networkhttps://string-db.org/network/580340.Tlie_1613KEGG: tai:Taci_0577 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1614 protein networkhttps://string-db.org/network/580340.Tlie_1614TIGRFAM: hydrogenase maturation protease; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: aco:Amico_1552 Ni,Fe-hydrogenase maturation factor; SPTR: Ni,Fe-hydrogenase [...]
Tlie_1615 protein networkhttps://string-db.org/network/580340.Tlie_1615NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; PFAM: Nickel-dependent hydrogenase; COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit; InterPro IPR001501: IPR018194; KE [...]
Tlie_1616 protein networkhttps://string-db.org/network/580340.Tlie_1616Hydrogen dehydrogenase; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; InterPro IPR006137; KEGG: aco:Amico_1554 NADH ubiquino [...]
Tlie_1617 protein networkhttps://string-db.org/network/580340.Tlie_1617NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur [...]
Tlie_1618 protein networkhttps://string-db.org/network/580340.Tlie_1618NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH [...]
Tlie_1619 protein networkhttps://string-db.org/network/580340.Tlie_1619NAD(P)-dependent iron-only hydrogenase iron-sulfur protein; KEGG: aco:Amico_1557 NADP-reducing hydrogenase, subunit B; SPTR: NADP-reducing hydrogenase, subunit B.
Tlie_1620 protein networkhttps://string-db.org/network/580340.Tlie_1620PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003594: IPR004358; KEGG: tai:Taci_0545 histidine kinase; [...]
Tlie_1621 protein networkhttps://string-db.org/network/580340.Tlie_1621PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: ac [...]
mobA protein networkhttps://string-db.org/network/580340.Tlie_1622Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) [...]
Tlie_1623 protein networkhttps://string-db.org/network/580340.Tlie_1623PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: tai:Taci_0151 formate/nitrite transporter; [...]
Tlie_1624 protein networkhttps://string-db.org/network/580340.Tlie_1624PFAM: PHP domain; InterPro IPR004013: IPR003141; KEGG: aco:Amico_0676 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: Putative PHP domain protein.
Tlie_1625 protein networkhttps://string-db.org/network/580340.Tlie_1625HPr kinase; PFAM: DRTGG domain; KEGG: tai:Taci_0693 HPr kinase; SPTR: Putative uncharacterized protein.
Tlie_1626 protein networkhttps://string-db.org/network/580340.Tlie_1626Fe-S cluster domain protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterPro IPR [...]
Tlie_1627 protein networkhttps://string-db.org/network/580340.Tlie_1627PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: tai:Taci_0691 putative anti-sigma reg [...]
Tlie_1628 protein networkhttps://string-db.org/network/580340.Tlie_1628PFAM: DRTGG domain; InterPro IPR010766; KEGG: aco:Amico_0672 DRTGG domain protein; PFAM: DRTGG domain protein; SPTR: Putative uncharacterized protein.
Tlie_1629 protein networkhttps://string-db.org/network/580340.Tlie_1629Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: tai:Taci_1740 heat shock protein HSP20; PFAM [...]
Tlie_1630 protein networkhttps://string-db.org/network/580340.Tlie_1630PFAM: Cupin domain; InterPro IPR013096; KEGG: hmo:HM1_2283 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Mannose-6-phosphate isomerase.
Tlie_1631 protein networkhttps://string-db.org/network/580340.Tlie_1631PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509: IPR010916; KEGG: tte:TTE0866 xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: [...]
Tlie_1632 protein networkhttps://string-db.org/network/580340.Tlie_1632PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: pca:Pcar_0066 alpha-beta hydrolase family esterase; PFAM: Patatin; SPTR [...]
Tlie_1633 protein networkhttps://string-db.org/network/580340.Tlie_1633ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: cpb:Cphamn1_1670 ADP-ribosylation/crystallin J1; PFAM: ADP-ribo [...]
hcp protein networkhttps://string-db.org/network/580340.Tlie_1634Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
Tlie_1635 protein networkhttps://string-db.org/network/580340.Tlie_1635PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: aco:Amico_1908 transcriptional regulator, BadM/Rrf2 famil [...]
Tlie_1636 protein networkhttps://string-db.org/network/580340.Tlie_1636PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: aco:Amico_0486 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Type [...]
Tlie_1637 protein networkhttps://string-db.org/network/580340.Tlie_1637PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: aco:Amico_0487 efflux transporter, RND f [...]
Tlie_1638 protein networkhttps://string-db.org/network/580340.Tlie_1638PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ate:Athe_1574 ABC transporter related; PFAM: [...]
Tlie_1639 protein networkhttps://string-db.org/network/580340.Tlie_1639Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sat:SYN_01995 export ABC [...]
Tlie_1640 protein networkhttps://string-db.org/network/580340.Tlie_1640PFAM: Nickel uptake substrate-specific transmembrane region; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: aco:Amico_0067 nickel transport complex, [...]
Tlie_1641 protein networkhttps://string-db.org/network/580340.Tlie_1641Cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751 [...]
Tlie_1642 protein networkhttps://string-db.org/network/580340.Tlie_1642KEGG: aco:Amico_0065 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1643 protein networkhttps://string-db.org/network/580340.Tlie_1643PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IP [...]
Tlie_1644 protein networkhttps://string-db.org/network/580340.Tlie_1644PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: aco:Amico_0063 ABC transporter related protein; PFAM: ABC transporter [...]
trpB protein networkhttps://string-db.org/network/580340.Tlie_1646Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
Tlie_1647 protein networkhttps://string-db.org/network/580340.Tlie_1647PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: mba:Mbar_A0858 cation efflux system prot [...]
Tlie_1648 protein networkhttps://string-db.org/network/580340.Tlie_1648PFAM: 4Fe-4S binding domain; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896; KEGG: aco:Amico_1907 4Fe-4S ferredoxin iron-sulfur binding [...]
Tlie_1649 protein networkhttps://string-db.org/network/580340.Tlie_1649PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: msv:Mesil_3249 hypothetical pro [...]
Tlie_1650 protein networkhttps://string-db.org/network/580340.Tlie_1650PFAM: Thioesterase superfamily; COGs: COG5496 thioesterase; InterPro IPR006683; KEGG: aco:Amico_0029 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized p [...]
Tlie_1651 protein networkhttps://string-db.org/network/580340.Tlie_1651Hypothetical protein; KEGG: mmc:Mmcs_4669 ATPase; SPTR: AAA ATPase containing von Willebrand factor type A (VWA) domain-like protein.
Tlie_1652 protein networkhttps://string-db.org/network/580340.Tlie_1652KEGG: lmh:LMHCC_0760 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1653 protein networkhttps://string-db.org/network/580340.Tlie_1653PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; InterPro IPR005079; KEGG: cvi:CV_2077 hypothetical protein; PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-tran [...]
Tlie_1654 protein networkhttps://string-db.org/network/580340.Tlie_1654PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG1204 Superfamily II helicase; InterPro IPR014021: IPR001650: IPR011545: IPR014001; KEGG: aco:Amico_0031 helicase domai [...]
Tlie_1655 protein networkhttps://string-db.org/network/580340.Tlie_1655L-threonine 3-dehydrogenase; PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: aoe:Clos_1940 NAD-dependent epimeras [...]
Tlie_1656 protein networkhttps://string-db.org/network/580340.Tlie_1656PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro I [...]
Tlie_1657 protein networkhttps://string-db.org/network/580340.Tlie_1657Hypothetical protein; KEGG: csa:Csal_2214 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: 5'-phosphoribosylglycinamide transformylase.
dapF protein networkhttps://string-db.org/network/580340.Tlie_1658Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
dapF-2 protein networkhttps://string-db.org/network/580340.Tlie_1659Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
Tlie_1660 protein networkhttps://string-db.org/network/580340.Tlie_1660PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR001176: IPR004838; KEGG: bbe:BBR47_45340 transaminase; PFAM: aminotransfe [...]
Tlie_1661 protein networkhttps://string-db.org/network/580340.Tlie_1661Putative transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain [...]
Tlie_1662 protein networkhttps://string-db.org/network/580340.Tlie_1662PFAM: Peptidase family M20/M25/M40; COGs: COG4187 Arginine degradation protein (predicted deacylase); InterPro IPR002933: IPR012166; KEGG: aco:Amico_0153 peptidase M20; PFAM: peptidase M20; SPTR: [...]
Tlie_1663 protein networkhttps://string-db.org/network/580340.Tlie_1663Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: mes:Meso_3886 cardiolipin synthetase 2; PFAM: [...]
Tlie_1664 protein networkhttps://string-db.org/network/580340.Tlie_1664KEGG: aco:Amico_0379 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1665 protein networkhttps://string-db.org/network/580340.Tlie_1665Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: drm:Dred_2925 hypothetical protein; PFAM: protein of unknown function DUF6 transmembr [...]
Tlie_1666 protein networkhttps://string-db.org/network/580340.Tlie_1666PEBP family protein; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family; COGs: COG1881 Phospholipid-binding protein; InterPro IPR005247: [...]
Tlie_1667 protein networkhttps://string-db.org/network/580340.Tlie_1667PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporters, OPT superfamily; putative oligopeptide transporter, OPT family; COGs: COG1297 membrane protein; InterPro IPR004813: [...]
Tlie_1668 protein networkhttps://string-db.org/network/580340.Tlie_1668PFAM: Coenzyme PQQ synthesis protein D (PqqD); KEGG: tko:TK1780 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1669 protein networkhttps://string-db.org/network/580340.Tlie_1669PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; COGs: COG0624 Acetylornithine deacetylase/Succin [...]
Tlie_1670 protein networkhttps://string-db.org/network/580340.Tlie_1670PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: aco:Amico_1079 histone family protein DNA-binding protein; PFAM: histone famil [...]
Tlie_1671 protein networkhttps://string-db.org/network/580340.Tlie_1671Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005479; KEGG: cdl:CDR20291_1562 cysteine [...]
Tlie_1672 protein networkhttps://string-db.org/network/580340.Tlie_1672Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010: IPR000182: IP [...]
Tlie_1673 protein networkhttps://string-db.org/network/580340.Tlie_1673PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711: IPR000835; KEGG: ctc:CTC02468 GntR family transcriptional re [...]
Tlie_1674 protein networkhttps://string-db.org/network/580340.Tlie_1674Putative lipoprotein; PFAM: Tripartite tricarboxylate transporter family receptor; COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: bcg:BCG9842_B4344 putative lipoprotein; [...]
Tlie_1675 protein networkhttps://string-db.org/network/580340.Tlie_1675Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctB family; KEGG: bhy:BHWA1_02094 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1676 protein networkhttps://string-db.org/network/580340.Tlie_1676Protein of unknown function DUF112 transmembrane; PFAM: Tripartite tricarboxylate transporter TctA family; COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: bhy:BHWA1_02095 [...]
Tlie_1677 protein networkhttps://string-db.org/network/580340.Tlie_1677Aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; COGs: COG1048 Aconitase A; InterPro IPR006250 [...]
Tlie_1678 protein networkhttps://string-db.org/network/580340.Tlie_1678Isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type; COGs: COG0538 Isocitrate dehydrogena [...]
Tlie_1679 protein networkhttps://string-db.org/network/580340.Tlie_1679Citrate lyase subunit gamma; PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein; InterPro IPR006495; KEGG: tai:Taci_0022 citrate lyase subunit gamma; S [...]
Tlie_1680 protein networkhttps://string-db.org/network/580340.Tlie_1680Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family; COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR011206; KEGG: tai:Taci_0340 citrate (pro-3S)-lyase; PFAM: HpcH/Hp [...]
Tlie_1681 protein networkhttps://string-db.org/network/580340.Tlie_1681PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: tai:Taci_0024 citrate lyase, alpha subunit; [...]
Tlie_1682 protein networkhttps://string-db.org/network/580340.Tlie_1682PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR019844: IPR012156: IPR011129; KEGG: aco:Amico_0349 cold-shock DNA-binding domain protein; PFAM: Col [...]
Tlie_1683 protein networkhttps://string-db.org/network/580340.Tlie_16835-carboxymethyl-2-hydroxymuconateDelta- isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catecho [...]
Tlie_1684 protein networkhttps://string-db.org/network/580340.Tlie_1684Putative PAS/PAC sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2206 HD-GYP domain; InterProIPR000014: IPR000700: IPR013655: IPR006674: IPR 001610; KEGG: dak:DaAHT [...]
Tlie_1685 protein networkhttps://string-db.org/network/580340.Tlie_1685Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: kol:Kole_1134 putative PAS/PAC sensor protein; PFAM: metal-dependent phosphohydrolase HD [...]
Tlie_1686 protein networkhttps://string-db.org/network/580340.Tlie_1686PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056: IPR006175: IPR019897; KEGG: pfu:P [...]
Tlie_1687 protein networkhttps://string-db.org/network/580340.Tlie_1687PFAM: TIM-barrel signal transduction protein; COGs: COG5564 TIM-barrel protein possibly a dioxygenase; InterPro IPR009215; KEGG: rle:pRL90195 hypothetical protein; PFAM: TIM-barrel signal transdu [...]
Tlie_1688 protein networkhttps://string-db.org/network/580340.Tlie_1688PFAM: Uncharacterised protein family (UPF0261); COGs: COG5441 conserved hypothetical protein; InterPro IPR008322: IPR003006; KEGG: rhi:NGR_a02150 hypothetical protein; PFAM: Uncharacterised conse [...]
Tlie_1689 protein networkhttps://string-db.org/network/580340.Tlie_1689Hypothetical protein; KEGG: dpo:Dpse_GA25375 GA25375 gene product from transcript GA25375-RA; SPTR: Putative uncharacterized protein.
Tlie_1690 protein networkhttps://string-db.org/network/580340.Tlie_1690PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_09765 possible pectin degradation protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Possible pectin degradation protein.
Tlie_1691 protein networkhttps://string-db.org/network/580340.Tlie_1691PFAM: Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; KEGG: aco:Amico_0203 peptidase M20; SPTR: Peptidase M2 [...]
Tlie_1692 protein networkhttps://string-db.org/network/580340.Tlie_1692PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: aco:Amico_1758 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrol [...]
Tlie_1693 protein networkhttps://string-db.org/network/580340.Tlie_1693PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: aco:Amico_1691 extracell [...]
Tlie_1694 protein networkhttps://string-db.org/network/580340.Tlie_1694PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: aco [...]
Tlie_1695 protein networkhttps://string-db.org/network/580340.Tlie_1695PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; KEGG: aco:Amico_1689 tripartite ATP- [...]
Tlie_1696 protein networkhttps://string-db.org/network/580340.Tlie_1696Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: hor:Hore_21100 cysteine synthase; PFA [...]
Tlie_1697 protein networkhttps://string-db.org/network/580340.Tlie_1697KEGG: fno:Fnod_1645 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1698 protein networkhttps://string-db.org/network/580340.Tlie_1698D-cysteine desulfhydrase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; COGs: COG2515 1-aminocyclopropane-1-carboxyl [...]
Tlie_1699 protein networkhttps://string-db.org/network/580340.Tlie_1699PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814; KEG [...]
Tlie_1700 protein networkhttps://string-db.org/network/580340.Tlie_1700PFAM: Uncharacterised protein family (UPF0259); KEGG: sfu:Sfum_4020 hypothetical protein; SPTR: Putative uncharacterized protein.
buk protein networkhttps://string-db.org/network/580340.Tlie_1701PFAM: Acetokinase family; TIGRFAM: butyrate kinase; COGs: COG3426 Butyrate kinase; InterPro IPR011245: IPR000890; KEGG: aco:Amico_1839 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Bu [...]
Tlie_1702 protein networkhttps://string-db.org/network/580340.Tlie_1702PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR014079: IPR002505: IPR012147; KEGG: tai:Taci_0453 phosphate but [...]
Tlie_1703 protein networkhttps://string-db.org/network/580340.Tlie_1703PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR002505: IPR012147; KEGG: aco:Amico_1841 phosphate butyryltransf [...]
buk-2 protein networkhttps://string-db.org/network/580340.Tlie_1704PFAM: Acetokinase family; TIGRFAM: butyrate kinase; COGs: COG3426 Butyrate kinase; InterPro IPR011245: IPR000890; KEGG: aco:Amico_1842 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Bu [...]
ilvE protein networkhttps://string-db.org/network/580340.Tlie_1705Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
Tlie_1706 protein networkhttps://string-db.org/network/580340.Tlie_1706PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: aco:Amico_1844 aminotransferase class IV; PFAM [...]
Tlie_1707 protein networkhttps://string-db.org/network/580340.Tlie_1707PFAM: SIS domain; Helix-turn-helix domain, rpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281: IPR001347; KEGG: aco:Amico_1807 transcriptional regulator, RpiR family; PFAM: [...]
Tlie_1708 protein networkhttps://string-db.org/network/580340.Tlie_1708PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: aco:Amico_1 [...]
Tlie_1709 protein networkhttps://string-db.org/network/580340.Tlie_1709PFAM: Domain of unknown function (DUF1850); InterPro IPR015001; KEGG: aco:Amico_1805 domain of unknown function DUF1850; PFAM: Domain of unknown function DUF1850; SPTR: Putative uncharacterized p [...]
Tlie_1710 protein networkhttps://string-db.org/network/580340.Tlie_1710PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853: IPR010656 [...]
Tlie_1711 protein networkhttps://string-db.org/network/580340.Tlie_1711PFAM: NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR01 [...]
Tlie_1712 protein networkhttps://string-db.org/network/580340.Tlie_1712PFAM: Ornithine cyclodeaminase/mu-crystallin family; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnB; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KE [...]
Tlie_1713 protein networkhttps://string-db.org/network/580340.Tlie_1713PFAM: Predicted membrane protein (DUF2207); KEGG: ddf:DEFDS_1130 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1714 protein networkhttps://string-db.org/network/580340.Tlie_1714PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterP [...]
Tlie_1715 protein networkhttps://string-db.org/network/580340.Tlie_1715PFAM: HTH domain; Response regulator receiver domain; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: aco:Amico_0175 response regulator receiver and unkno [...]
Tlie_1716 protein networkhttps://string-db.org/network/580340.Tlie_1716TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: tai:Taci_1467 TRAP transporter so [...]
Tlie_1717 protein networkhttps://string-db.org/network/580340.Tlie_1717PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853: IPR010656 [...]
Tlie_1718 protein networkhttps://string-db.org/network/580340.Tlie_1718PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0028 Thia [...]
Tlie_1719 protein networkhttps://string-db.org/network/580340.Tlie_1719PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mbu:Mbur_1925 MATE efflux family protein; PFAM: multi antimicr [...]
Tlie_1720 protein networkhttps://string-db.org/network/580340.Tlie_1720PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cbi:CLJ_B2452 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory prote [...]
folD protein networkhttps://string-db.org/network/580340.Tlie_17215, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then [...]
Tlie_1722 protein networkhttps://string-db.org/network/580340.Tlie_1722Dihydropyrimidinase; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro I [...]
Tlie_1723 protein networkhttps://string-db.org/network/580340.Tlie_1723Nucleoside ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; [...]
Tlie_1724 protein networkhttps://string-db.org/network/580340.Tlie_1724Nucleoside ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4603 ABC-type uncharacterized transport system permease component; Int [...]
Tlie_1725 protein networkhttps://string-db.org/network/580340.Tlie_1725Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: [...]
Tlie_1726 protein networkhttps://string-db.org/network/580340.Tlie_1726PFAM: Basic membrane protein; COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: gau:GAU_0026 putative lipoprotein; PFAM: [...]
Tlie_1727 protein networkhttps://string-db.org/network/580340.Tlie_1727PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; probable car [...]
Tlie_1728 protein networkhttps://string-db.org/network/580340.Tlie_1728M20/DapE family protein YgeY; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; M20/DapE family protein YgeY; COGs: COG0624 Acety [...]
Tlie_1729 protein networkhttps://string-db.org/network/580340.Tlie_1729PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: sit [...]
Tlie_1730 protein networkhttps://string-db.org/network/580340.Tlie_1730PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: sit:TM1040 [...]
Tlie_1731 protein networkhttps://string-db.org/network/580340.Tlie_1731TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP fam [...]
Tlie_1732 protein networkhttps://string-db.org/network/580340.Tlie_1732Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: aco:Amico_0198 pyridoxal-5'-phosphate [...]
glyA-2 protein networkhttps://string-db.org/network/580340.Tlie_1733Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major s [...]
Tlie_1734 protein networkhttps://string-db.org/network/580340.Tlie_1734L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
Tlie_1735 protein networkhttps://string-db.org/network/580340.Tlie_1735PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylas [...]
Tlie_1736 protein networkhttps://string-db.org/network/580340.Tlie_1736PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylas [...]
Tlie_1737 protein networkhttps://string-db.org/network/580340.Tlie_1737Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR00084 [...]
Tlie_1738 protein networkhttps://string-db.org/network/580340.Tlie_1738ABC transporter, periplasmic substrate-binding protein; COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: aco:Amico_1561 ABC transporter, periplasmic substrate-binding p [...]
Tlie_1739 protein networkhttps://string-db.org/network/580340.Tlie_1739PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: aco:Amico_1560 bindin [...]
Tlie_1740 protein networkhttps://string-db.org/network/580340.Tlie_1740PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR005116: IPR [...]
Tlie_1741 protein networkhttps://string-db.org/network/580340.Tlie_1741Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168 [...]
Tlie_1742 protein networkhttps://string-db.org/network/580340.Tlie_1742Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168 [...]
Tlie_1743 protein networkhttps://string-db.org/network/580340.Tlie_1743PFAM: AbgT putative transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family; COGs: COG2978 Putative p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: bcl:ABC3179 am [...]
Tlie_1744 protein networkhttps://string-db.org/network/580340.Tlie_1744PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: tai:Taci_0197 peptidase M24; PFAM: peptidase M24; SPTR: [...]
Tlie_1745 protein networkhttps://string-db.org/network/580340.Tlie_1745Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [...]
Tlie_1746 protein networkhttps://string-db.org/network/580340.Tlie_1746Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [...]
Tlie_1747 protein networkhttps://string-db.org/network/580340.Tlie_1747Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; K [...]
Tlie_1748 protein networkhttps://string-db.org/network/580340.Tlie_1748Lipoprotein; KEGG: fno:Fnod_0052 lipoprotein; SPTR: Putative uncharacterized protein.
Tlie_1749 protein networkhttps://string-db.org/network/580340.Tlie_1749PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: tai:Taci_1439 transcriptional regulator, GntR family; [...]
Tlie_1750 protein networkhttps://string-db.org/network/580340.Tlie_1750PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: dde:Dde_1624 ATPase; PFAM: ABC trans [...]
Tlie_1751 protein networkhttps://string-db.org/network/580340.Tlie_1751Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: mac:MA0951 hemin permease; [...]
Tlie_1752 protein networkhttps://string-db.org/network/580340.Tlie_1752PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: dsa:Desal_0075 periplasmic binding protein; PFAM: peri [...]
Tlie_1753 protein networkhttps://string-db.org/network/580340.Tlie_1753PFAM: GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR003018; KEGG: aco:Amico_1621 diguanylate cyclase with GAF sens [...]
Tlie_1754 protein networkhttps://string-db.org/network/580340.Tlie_1754PFAM: Ornithine cyclodeaminase/mu-crystallin family; COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: aco:Amico_0921 ornithine cyclodeaminase; PFAM: ornithi [...]
Tlie_1755 protein networkhttps://string-db.org/network/580340.Tlie_1755PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/ [...]
Tlie_1756 protein networkhttps://string-db.org/network/580340.Tlie_1756PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferr [...]
Tlie_1757 protein networkhttps://string-db.org/network/580340.Tlie_1757Hypothetical protein; PFAM: IPT/TIG domain; KEGG: rrs:RoseRS_4292 Cna B domain-containing protein; SPTR: Cna B domain protein.
Tlie_1758 protein networkhttps://string-db.org/network/580340.Tlie_1758KEGG: tai:Taci_0134 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1759 protein networkhttps://string-db.org/network/580340.Tlie_1759PFAM: DctM-like transporters; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004680; KEGG: tai:Taci_0135 TRAP C4-dicarboxylate transport system pe [...]
Tlie_1760 protein networkhttps://string-db.org/network/580340.Tlie_1760KEGG: tai:Taci_0136 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1761 protein networkhttps://string-db.org/network/580340.Tlie_1761PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro IPR007036; KEGG: tai:Taci_0137 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspart [...]
Tlie_1762 protein networkhttps://string-db.org/network/580340.Tlie_1762Gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: tai:Taci_0138 gamma-glutam [...]
Tlie_1763 protein networkhttps://string-db.org/network/580340.Tlie_1763Hypothetical protein; PFAM: Mur ligase middle domain; KEGG: aco:Amico_0221 hypothetical protein; SPTR: Capsule biosynthesis protein.
Tlie_1764 protein networkhttps://string-db.org/network/580340.Tlie_1764TIGRFAM: poly-gamma-glutamate biosynthesis protein PgsC/CapC; KEGG: aco:Amico_0222 capsule biosynthesis protein CapC; SPTR: Capsule biosynthesis protein CapC.
Tlie_1765 protein networkhttps://string-db.org/network/580340.Tlie_1765KEGG: aco:Amico_0223 hypothetical protein; SPTR: Putative membrane protein.
Tlie_1766 protein networkhttps://string-db.org/network/580340.Tlie_1766Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2205 Osmosensitive K+ [...]
Tlie_1767 protein networkhttps://string-db.org/network/580340.Tlie_1767PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: tai:Taci_0140 response [...]
Tlie_1768 protein networkhttps://string-db.org/network/580340.Tlie_1768KEGG: dev:DhcVS_1104 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1771 protein networkhttps://string-db.org/network/580340.Tlie_1771Hypothetical protein; InterPro IPR017896; KEGG: mth:MTH1365 hypothetical protein; SPTR: Conserved protein.
Tlie_1772 protein networkhttps://string-db.org/network/580340.Tlie_1772UspA domain-containing protein; PFAM: Universal stress protein family; InterPro IPR006016: IPR006015; KEGG: ppd:Ppro_3112 UspA domain-containing protein; PFAM: UspA domain-containing protein; SPT [...]
Tlie_1773 protein networkhttps://string-db.org/network/580340.Tlie_1773UspA domain-containing protein; PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: tye [...]
Tlie_1774 protein networkhttps://string-db.org/network/580340.Tlie_1774Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706: IPR [...]
Tlie_1775 protein networkhttps://string-db.org/network/580340.Tlie_1775KEGG: afv:AFLA_104330 hypothetical protein; SPTR: Trimethylamine--corrinoid methyltransferase MttB.
Tlie_1776 protein networkhttps://string-db.org/network/580340.Tlie_1776PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: adg:Adeg_1934 prot [...]
Tlie_1777 protein networkhttps://string-db.org/network/580340.Tlie_1777Redox-active disulfide protein 2; PFAM: Bacterial regulatory protein, arsR family; TIGRFAM: small redox-active disulfide protein 2; InterPro IPR005243: IPR001845; KEGG: tai:Taci_1479 transcriptio [...]
Tlie_1778 protein networkhttps://string-db.org/network/580340.Tlie_1778UspA domain-containing protein; PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: aco [...]
Tlie_1779 protein networkhttps://string-db.org/network/580340.Tlie_1779PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: aco:Amico_0026 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysacch [...]
Tlie_1780 protein networkhttps://string-db.org/network/580340.Tlie_1780PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_1781 protein networkhttps://string-db.org/network/580340.Tlie_1781Hypothetical protein.
Tlie_1782 protein networkhttps://string-db.org/network/580340.Tlie_1782DNA-directed DNA polymerase; PFAM: Phosphoribosyl transferase domain; impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; COGs: COG0389 Nucleotidyltransferase/DNA polym [...]
Tlie_1783 protein networkhttps://string-db.org/network/580340.Tlie_1783PFAM: Acyl-ACP thioesterase; COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: dat:HRM2_18760 acyl-acyl carrier protein thioesterase; PFAM: acyl-ACP thioesterase; SPTR: Acyl-acyl car [...]
Tlie_1789 protein networkhttps://string-db.org/network/580340.Tlie_1789PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR000917; KEGG: net:Neut_0214 major facilitator transporter; PFAM: major facilitator superfamily [...]
Tlie_1790 protein networkhttps://string-db.org/network/580340.Tlie_1790Protein of unknown function DUF125 transmembrane; PFAM: VIT family; Rubrerythrin; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: tna:CTN_0174 hypothetical protein; PFAM [...]
Tlie_1791 protein networkhttps://string-db.org/network/580340.Tlie_1791PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: aco:Amico_0362 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase.
Tlie_1792 protein networkhttps://string-db.org/network/580340.Tlie_1792Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosp [...]
hisC-2 protein networkhttps://string-db.org/network/580340.Tlie_1793PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR005 [...]
Tlie_1794 protein networkhttps://string-db.org/network/580340.Tlie_1794PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterProIPR005892: IPR [...]
Tlie_1795 protein networkhttps://string-db.org/network/580340.Tlie_1795PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: bcl:ABC19 [...]
Tlie_1796 protein networkhttps://string-db.org/network/580340.Tlie_1796PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectan [...]
Tlie_1797 protein networkhttps://string-db.org/network/580340.Tlie_1797PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KE [...]
Tlie_1798 protein networkhttps://string-db.org/network/580340.Tlie_1798PFAM: Bacterial extracellular solute-binding protein; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: cag:Cagg_2416 extracellular solute-binding prot [...]
Tlie_1799 protein networkhttps://string-db.org/network/580340.Tlie_1799PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: rxy:Rxyl_1174 binding-protein [...]
Tlie_1800 protein networkhttps://string-db.org/network/580340.Tlie_1800PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: rxy:Rxyl_1173 ABC transporter related; PFA [...]
pdxT protein networkhttps://string-db.org/network/580340.Tlie_1801Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is [...]
pdxS protein networkhttps://string-db.org/network/580340.Tlie_1802Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided b [...]
Tlie_1803 protein networkhttps://string-db.org/network/580340.Tlie_1803Protein of unknown function DUF125 transmembrane; PFAM: VIT family; Rubrerythrin; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: tna:CTN_0174 hypothetical protein; PFAM [...]
Tlie_1804 protein networkhttps://string-db.org/network/580340.Tlie_1804PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: hoh:Hoch_2261 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase.
Tlie_1806 protein networkhttps://string-db.org/network/580340.Tlie_1806PFAM: Plasmid stabilisation system protein; COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR007712; KEGG: alv:Alvin_1697 addiction module toxin, R [...]
Tlie_1807 protein networkhttps://string-db.org/network/580340.Tlie_1807Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
Tlie_1809 protein networkhttps://string-db.org/network/580340.Tlie_1809PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: slp:Sli [...]
Tlie_1810 protein networkhttps://string-db.org/network/580340.Tlie_1810TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR020019: IPR001451; KEGG: tte:TTE0666 ace [...]
Tlie_1811 protein networkhttps://string-db.org/network/580340.Tlie_1811Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: tte:TTE [...]
Tlie_1812 protein networkhttps://string-db.org/network/580340.Tlie_1812PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dtu:Dtur_0585 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl tr [...]
Tlie_1813 protein networkhttps://string-db.org/network/580340.Tlie_1813PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: mmw:Mmwyl1_0835 UDP-N-acetylg [...]
Tlie_1814 protein networkhttps://string-db.org/network/580340.Tlie_1814PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sun:SUN_0100 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacter [...]
Tlie_1815 protein networkhttps://string-db.org/network/580340.Tlie_1815PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: cbe:Cbei_4628 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Predicted protein.
Tlie_1817 protein networkhttps://string-db.org/network/580340.Tlie_1817KEGG: cno:NT01CX_1792 putative glycosyl transferase; SPTR: Putative glycosyl transferase.
Tlie_1821 protein networkhttps://string-db.org/network/580340.Tlie_1821Hypothetical protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: oih:OB2887 hypothetical protein; SPTR: Capsular polysaccharide synthesis enzyme.
Tlie_1822 protein networkhttps://string-db.org/network/580340.Tlie_1822PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mpl:Mpal_0587 polysaccharide biosynthesi [...]
Tlie_1823 protein networkhttps://string-db.org/network/580340.Tlie_1823Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterP [...]
Tlie_1825 protein networkhttps://string-db.org/network/580340.Tlie_1825Transferase hexapeptide repeat containing protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: amt:Amet_3445 hexapeptide transferase family protein; [...]
Tlie_1826 protein networkhttps://string-db.org/network/580340.Tlie_1826Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehyd [...]
Tlie_1827 protein networkhttps://string-db.org/network/580340.Tlie_1827PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: swo:Swol_0128 hypothetical protein; PFAM: polysaccharide biosynthesis pr [...]
murJ-2 protein networkhttps://string-db.org/network/580340.Tlie_1828Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
Tlie_1829 protein networkhttps://string-db.org/network/580340.Tlie_1829PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284: IPR007627; KEGG: aco:Amico_1738 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 [...]
Tlie_1830 protein networkhttps://string-db.org/network/580340.Tlie_1830PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_1832 protein networkhttps://string-db.org/network/580340.Tlie_1832PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: hje:HacjB3_02920 sodium:pantothenate symporter; PFAM: Na+/solute symporter; SPTR: Putative sod [...]
leuD-4 protein networkhttps://string-db.org/network/580340.Tlie_18333-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
leuC-3 protein networkhttps://string-db.org/network/580340.Tlie_1834Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
Tlie_1835 protein networkhttps://string-db.org/network/580340.Tlie_1835Pyruvate carboxyltransferase; PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: aco:Amico_1324 pyruvate carboxyltransferase; PFAM: pyruvat [...]
Tlie_1836 protein networkhttps://string-db.org/network/580340.Tlie_1836PFAM: CoA-transferase family III; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: aco:Amico_1323 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile aci [...]
Tlie_1837 protein networkhttps://string-db.org/network/580340.Tlie_1837PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase; COGs: COG2513 PEP phosphonomutase; InterPro IPR000918: IPR018523; KEGG: aco:Amico_1318 carboxyvinyl-carbo [...]
Tlie_1838 protein networkhttps://string-db.org/network/580340.Tlie_1838PFAM: Prephenate dehydratase; Chorismate mutase type II; COGs: COG0077 Prephenate dehydratase; InterProIPR020822: IPR001086: IPR002912: IPR002701: IPR 008242; KEGG: dtu:Dtur_1641 prephenate dehyd [...]
trpA protein networkhttps://string-db.org/network/580340.Tlie_1839Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
trpB-2 protein networkhttps://string-db.org/network/580340.Tlie_1840Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
trpF protein networkhttps://string-db.org/network/580340.Tlie_1841PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: pmo:Pmob_1209 phosphoribosylanthranilate isomerase; PFAM: N-( [...]
Tlie_1842 protein networkhttps://string-db.org/network/580340.Tlie_1842PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798: IPR001468; KEGG: pmo:Pmob_1210 indole-3-glycerol-phosphate synthase; PFAM: Indo [...]
trpD protein networkhttps://string-db.org/network/580340.Tlie_1843Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...]
Tlie_1844 protein networkhttps://string-db.org/network/580340.Tlie_1844PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; GMP synthase (glutamine-hydrolyzing), N-terminal domain or [...]
Tlie_1845 protein networkhttps://string-db.org/network/580340.Tlie_1845Anthranilate synthase; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR00680 [...]
Tlie_1846 protein networkhttps://string-db.org/network/580340.Tlie_1846PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: tai:Taci_0323 methyl-accepti [...]
Tlie_1847 protein networkhttps://string-db.org/network/580340.Tlie_1847PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320: IPR00163 [...]
Tlie_1849 protein networkhttps://string-db.org/network/580340.Tlie_1849PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR004638; KEGG: gur:Gura_2706 EmrB/Qa [...]
Tlie_1850 protein networkhttps://string-db.org/network/580340.Tlie_1850Hydroxymethylpyrimidine synthase; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: sfu:Sfum_2776 thiamin [...]
thi4 protein networkhttps://string-db.org/network/580340.Tlie_1851Thiazole-adenylate synthase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiaz [...]
Tlie_1852 protein networkhttps://string-db.org/network/580340.Tlie_1852Transporter, NhaC family (TC 2.A.35); PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461: IPR006162: IPR004770; KEGG: tai:Taci_14 [...]
Tlie_1853 protein networkhttps://string-db.org/network/580340.Tlie_1853Type IV pilus assembly PilZ; PFAM: PilZ domain; InterPro IPR009875; KEGG: cse:Cseg_0159 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: type IV pilus assembly PilZ; SPTR: FAD-de [...]
Tlie_1854 protein networkhttps://string-db.org/network/580340.Tlie_1854PFAM: GGDEF domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver d [...]
Tlie_1855 protein networkhttps://string-db.org/network/580340.Tlie_1855Diguanylate cyclase; PFAM: GGDEF domain; CHASE4 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR007892; KEGG: fno:Fnod_0031 diguanylat [...]
Tlie_1856 protein networkhttps://string-db.org/network/580340.Tlie_1856PFAM: B3/4 domain; COGs: COG3382 conserved hypothetical protein; InterPro IPR005146; KEGG: tai:Taci_1605 B3/4 domain protein; PFAM: B3/4 domain protein; SPTR: B3/4 domain protein.
Tlie_1857 protein networkhttps://string-db.org/network/580340.Tlie_1857PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: slp:Slip_1151 transposase mutator type; PFAM: transposase mutator type; SPTR: T [...]
Tlie_1858 protein networkhttps://string-db.org/network/580340.Tlie_1858KEGG: mmz:MmarC7_1808 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1859 protein networkhttps://string-db.org/network/580340.Tlie_1859Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR005829: IPR015884; KEGG: [...]
Tlie_1860 protein networkhttps://string-db.org/network/580340.Tlie_1860PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: tmt:Tmath_0780 protein of unknown function DUF [...]
Tlie_1861 protein networkhttps://string-db.org/network/580340.Tlie_18611-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; PFAM: AIR carboxylase; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: tex:Teth514_2219 NCAIR [...]
Tlie_1862 protein networkhttps://string-db.org/network/580340.Tlie_1862ExsB family protein; PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein; COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR005232; KEGG: tex:Teth514_2220 ExsB family [...]
Tlie_1863 protein networkhttps://string-db.org/network/580340.Tlie_1863Protein of unknown function DUF2088; PFAM: Uncharacterized conserved protein (DUF2088); COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: aco:Amico_1304 protein of unknown f [...]
Tlie_1864 protein networkhttps://string-db.org/network/580340.Tlie_1864KEGG: oih:OB3269 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1865 protein networkhttps://string-db.org/network/580340.Tlie_1865PFAM: Bacterial regulatory proteins, gntR family; InterPro IPR000524; KEGG: gyc:GYMC61_0774 regulatory protein GntR HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPT [...]
Tlie_1866 protein networkhttps://string-db.org/network/580340.Tlie_1866PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gem:GM21_1846 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase family protein.
Tlie_1867 protein networkhttps://string-db.org/network/580340.Tlie_1867Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: aco:Am [...]
Tlie_1868 protein networkhttps://string-db.org/network/580340.Tlie_1868Silent information regulator protein Sir2; PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: aco:Amico_1280 silent information regulator pr [...]
Tlie_1869 protein networkhttps://string-db.org/network/580340.Tlie_1869Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: ttr:Tter_0377 protein of unknown function DUF6 transmembrane; PFAM: protein of unknow [...]
Tlie_1870 protein networkhttps://string-db.org/network/580340.Tlie_1870PFAM: BioY family; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: aco:Amico_1847 BioY protein; PFAM: BioY protein; SPTR: BioY protein.
Tlie_1871 protein networkhttps://string-db.org/network/580340.Tlie_1871PFAM: Phosphoenolpyruvate carboxykinase; COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272; KEGG: cpo:COPRO5265_0282 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpy [...]
Tlie_1872 protein networkhttps://string-db.org/network/580340.Tlie_1872PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498: IPR020569; KEGG: aco:Amico_1848 prot [...]
Tlie_1873 protein networkhttps://string-db.org/network/580340.Tlie_1873Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: aco:Amico_1849 histidine triad [...]
Tlie_1874 protein networkhttps://string-db.org/network/580340.Tlie_1874KEGG: aco:Amico_1850 hypothetical protein; SPTR: Putative uncharacterized protein.
Tlie_1875 protein networkhttps://string-db.org/network/580340.Tlie_1875parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; K [...]
Tlie_1876 protein networkhttps://string-db.org/network/580340.Tlie_1876Chromosome segregation ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: aco:Amico_1852 cobyrinic acid ac-diamide syntha [...]
rsmG protein networkhttps://string-db.org/network/580340.Tlie_187716S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
Tlie_1878 protein networkhttps://string-db.org/network/580340.Tlie_1878PFAM: Domain of unknown function (DUF296); COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175: IPR000225; KEGG: kol:Kole_2012 protein of unknown function DUF296 [...]
Tlie_1879 protein networkhttps://string-db.org/network/580340.Tlie_1879Nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021: IPR002071; KEGG: aco:Amico_1 [...]
Tlie_1881 protein networkhttps://string-db.org/network/580340.Tlie_1881L-threonine ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 py [...]
Tlie_1882 protein networkhttps://string-db.org/network/580340.Tlie_1882Cof-like hydrolase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG05 [...]
Tlie_1883 protein networkhttps://string-db.org/network/580340.Tlie_1883PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010969; KEGG: aco:Amico_1909 cysteine desulfurase family p [...]
Tlie_1884 protein networkhttps://string-db.org/network/580340.Tlie_1884TIGRFAM: ferredoxin-type protein, NapH/MauN family; COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: aco:Amico_0074 polyferredoxin-like protein; SPTR: Polyferredoxin-like protei [...]
Tlie_1885 protein networkhttps://string-db.org/network/580340.Tlie_1885PFAM: Glycosyl transferases group 1; Monogalactosyldiacylglycerol (MGDG) synthase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR009695: IPR001296; KEGG: [...]
Tlie_1886 protein networkhttps://string-db.org/network/580340.Tlie_1886PFAM: DHHA1 domain; COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: aco:Amico_1914 phosphohydrolase (DHH superfamily)-like protein; PFAM: phosphoesterase DHHA1; SPTR: [...]