Organism Overview: Peptostreptococcus stomatis


 
EFM64817.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0001Pseudouridine synthase, RluA family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00849.
EFM64858.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0002Orn/Lys/Arg decarboxylase, major domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01276; match [...]
tmk protein networkhttps://string-db.org/network/596315.HMPREF0634_0003dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
EFM64856.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0004Putative DNA polymerase III, delta' subunit.
EFM64865.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0005PSP1 C-terminal domain protein; Identified by match to protein family HMM PF04468.
EFM64863.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0006Methyltransferase domain protein; Identified by match to protein family HMM PF05175; match to protein family HMM PF08241; Belongs to the methyltransferase superfamily.
yraL protein networkhttps://string-db.org/network/596315.HMPREF0634_0007S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
EFM64857.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0008Hypothetical protein.
EFM64859.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0009Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
pncB protein networkhttps://string-db.org/network/596315.HMPREF0634_0010Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and [...]
EFM64862.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0011Transcriptional regulator, AsnC family; Identified by match to protein family HMM PF01037.
metG protein networkhttps://string-db.org/network/596315.HMPREF0634_0012methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
EFM64866.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0013Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010.
EFM64121.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0014Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04122.
EFM64127.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0015Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076.
EFM64134.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0016Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
EFM64132.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0017Hypothetical protein.
aroB protein networkhttps://string-db.org/network/596315.HMPREF0634_00183-dehydroquinate synthase; Identified by match to protein family HMM PF01488; match to protein family HMM PF01761; match to protein family HMM PF08501; match to protein family HMM TIGR01357.
aroF protein networkhttps://string-db.org/network/596315.HMPREF0634_00193-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361.
EFM64118.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0020Identified by match to protein family HMM PF02632.
EFM64128.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0021Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00258; match to protein family HMM PF00753.
EFM64116.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0022Cupin domain protein; Identified by match to protein family HMM PF07883.
EFM64102.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0023Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027.
EFM64148.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0024Peptidase propeptide and YPEB domain protein; Identified by match to protein family HMM PF03413.
EFM64117.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0025Hypothetical protein.
EFM64105.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0026Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
EFM64113.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0027Transcriptional regulator; Identified by match to protein family HMM PF02082.
EFM64104.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0028Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64110.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0031Fic family protein; Identified by match to protein family HMM PF02661.
EFM64107.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0032Hypothetical protein.
EFM64145.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0033Identified by match to protein family HMM PF08002.
rumA protein networkhttps://string-db.org/network/596315.HMPREF0634_003423S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF01170; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I- [...]
EFM64109.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0035Pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA [...]
hslO protein networkhttps://string-db.org/network/596315.HMPREF0634_0036Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial de [...]
EFM64098.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0037Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
EFM64147.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0038ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64122.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0039Cobalt transport protein; Identified by match to protein family HMM PF02361.
EFM64120.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0040Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
EFM64142.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0041ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64124.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0042ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64099.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0043Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
EFM64103.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0044Hypothetical protein.
EFM64100.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0045Hypothetical protein.
EFM64119.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0046Hypothetical protein.
EFM64114.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0047Identified by match to protein family HMM PF04239.
EFM64136.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0048CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
nimB protein networkhttps://string-db.org/network/596315.HMPREF0634_00495-nitroimidazole antibiotic resistance protein NimB; Identified by match to protein family HMM PF01243.
EFM64111.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0050L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; Belongs to the iron-sulfur dependent L-serin [...]
dapA protein networkhttps://string-db.org/network/596315.HMPREF0634_0051Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
rpsD protein networkhttps://string-db.org/network/596315.HMPREF0634_0052Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
EFM64126.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0053ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64137.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0054ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
EFM64144.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0055ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
EFM64143.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0056Antibiotic biosynthesis monooxygenase; Identified by match to protein family HMM PF03992.
EFM64115.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0057YhgE/Pip domain protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062.
EFM64138.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0058Hypothetical protein.
EFM64149.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0059Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64101.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0060Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to t [...]
EFM64112.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0061Oxidoreductase; Identified by match to protein family HMM PF09719; match to protein family HMM TIGR01909.
EFM64139.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0062Transcriptional regulator, Spx/MgsR family; Identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; Belongs to the ArsC family.
EFM64131.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0063Hypothetical protein.
EFM64123.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0064Identified by match to protein family HMM PF03009.
EFM64150.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0065ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64108.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0066Efflux ABC transporter, permease protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02687.
aroD protein networkhttps://string-db.org/network/596315.HMPREF0634_00683-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroqui [...]
EFM63898.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0069Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
EFM63906.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0070Cobalt transport protein; Identified by match to protein family HMM PF02361.
ecfA protein networkhttps://string-db.org/network/596315.HMPREF0634_0071Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provi [...]
ecfA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0072Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provi [...]
EFM63925.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0073Identified by match to protein family HMM PF06912.
EFM63921.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0074Putative membrane protein; Identified by match to protein family HMM PF00892.
EFM63924.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0075Hypothetical protein; Identified by glimmer; putative.
EFM63909.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0076Hypothetical protein.
EFM63916.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0077Hypothetical protein.
EFM63930.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0078Hypothetical protein.
rplQ protein networkhttps://string-db.org/network/596315.HMPREF0634_0079Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.
rpoA protein networkhttps://string-db.org/network/596315.HMPREF0634_0080DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsK protein networkhttps://string-db.org/network/596315.HMPREF0634_008130S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsM protein networkhttps://string-db.org/network/596315.HMPREF0634_008230S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpmJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0083Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.
EFM63910.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0084Hypothetical protein.
adk protein networkhttps://string-db.org/network/596315.HMPREF0634_0085Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
secY protein networkhttps://string-db.org/network/596315.HMPREF0634_0086Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...]
rplO protein networkhttps://string-db.org/network/596315.HMPREF0634_0087Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpmD protein networkhttps://string-db.org/network/596315.HMPREF0634_0088Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308.
rpsE protein networkhttps://string-db.org/network/596315.HMPREF0634_0089Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
rplR protein networkhttps://string-db.org/network/596315.HMPREF0634_0090Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
rplF protein networkhttps://string-db.org/network/596315.HMPREF0634_0091Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...]
rpsH protein networkhttps://string-db.org/network/596315.HMPREF0634_0092Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...]
rplE protein networkhttps://string-db.org/network/596315.HMPREF0634_0093Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...]
rplX protein networkhttps://string-db.org/network/596315.HMPREF0634_0094Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplN protein networkhttps://string-db.org/network/596315.HMPREF0634_0095Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/596315.HMPREF0634_009630S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rpmC protein networkhttps://string-db.org/network/596315.HMPREF0634_0097Ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.
rplP protein networkhttps://string-db.org/network/596315.HMPREF0634_0098Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/596315.HMPREF0634_0099Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/596315.HMPREF0634_0100Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of [...]
rpsS protein networkhttps://string-db.org/network/596315.HMPREF0634_0101Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/596315.HMPREF0634_0102Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...]
rplW protein networkhttps://string-db.org/network/596315.HMPREF0634_0103Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...]
rplD protein networkhttps://string-db.org/network/596315.HMPREF0634_010450S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/596315.HMPREF0634_010550S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rpsJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0106Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
EFM63920.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0107Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
EFM63907.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0108Creatinase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
EFM64297.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0109Peptidase, S8/S53 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00082.
EFM64293.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0110Iron transport-associated domain protein; Identified by match to protein family HMM PF04122; match to protein family HMM PF05031.
trxA protein networkhttps://string-db.org/network/596315.HMPREF0634_0111Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
EFM64315.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0112ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
EFM64317.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0113Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64291.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0115SH3 domain protein; Identified by match to protein family HMM PF01832; match to protein family HMM PF06347; match to protein family HMM PF08239.
EFM64298.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0116Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
cobB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0117Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin fam [...]
scpB protein networkhttps://string-db.org/network/596315.HMPREF0634_0118Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA awa [...]
scpA protein networkhttps://string-db.org/network/596315.HMPREF0634_0119ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into bot [...]
EFM64300.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0120Peptidase, M50 family; Identified by match to protein family HMM PF02163.
rnj protein networkhttps://string-db.org/network/596315.HMPREF0634_0121Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
EFM64308.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0122Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307.
EFM64289.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0123Inosine 5-monophosphate dehydrogenase; Identified by match to protein family HMM PF00478; match to protein family HMM PF00571.
recA protein networkhttps://string-db.org/network/596315.HMPREF0634_0124RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
pgsA protein networkhttps://string-db.org/network/596315.HMPREF0634_0125CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatid [...]
rimO protein networkhttps://string-db.org/network/596315.HMPREF0634_0126Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
EFM64311.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0127Identified by match to protein family HMM PF01580; match to protein family HMM PF09397.
EFM64303.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0128Peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.
EFM64296.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0129Identified by match to protein family HMM PF00877; match to protein family HMM PF04122.
pnp protein networkhttps://string-db.org/network/596315.HMPREF0634_0130Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
EFM64310.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0131EDD domain protein, DegV family; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.
rpsO protein networkhttps://string-db.org/network/596315.HMPREF0634_0132Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
ribF protein networkhttps://string-db.org/network/596315.HMPREF0634_0133Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01467; match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR [...]
truB protein networkhttps://string-db.org/network/596315.HMPREF0634_0134tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
EFM64312.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0135DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272.
EFM64306.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0136Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076.
EFM64301.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0137LPXTG-motif cell wall anchor domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM TIGR01167.
EFM64175.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0139Hypothetical protein.
EFM64173.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0140Hypothetical protein.
EFM64170.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0141Hypothetical protein.
EFM64164.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0142Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) ( [...]
pyrB protein networkhttps://string-db.org/network/596315.HMPREF0634_0143Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine c [...]
pyrK protein networkhttps://string-db.org/network/596315.HMPREF0634_0144Oxidoreductase NAD-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate elect [...]
pyrD protein networkhttps://string-db.org/network/596315.HMPREF0634_0145Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
pyrE protein networkhttps://string-db.org/network/596315.HMPREF0634_0146Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
EFM64176.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0147Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM64171.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0148Cobalt transport protein; Identified by match to protein family HMM PF02361.
EFM64169.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0149ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64172.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0150Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
EFM64162.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0151ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64163.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0152ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64165.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0153DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM64174.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0154Transcriptional regulator, GntR family.
EFM64167.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0155ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64232.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0157Fic family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02661.
EFM64234.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0158Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
rpsI protein networkhttps://string-db.org/network/596315.HMPREF0634_0159Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.
rplM protein networkhttps://string-db.org/network/596315.HMPREF0634_0160Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...]
EFM64237.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0161Hypothetical protein; Identified by glimmer; putative.
pdxB protein networkhttps://string-db.org/network/596315.HMPREF0634_01624-phosphoerythronate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
EFM64233.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0163Aminotransferase, class V; Identified by match to protein family HMM PF00266.
truA protein networkhttps://string-db.org/network/596315.HMPREF0634_0164tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
glmS protein networkhttps://string-db.org/network/596315.HMPREF0634_0165Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
EFM65246.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0168Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM65244.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0169ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65241.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0170Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM65239.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0171Hypothetical protein.
proC protein networkhttps://string-db.org/network/596315.HMPREF0634_0172Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
EFM65237.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0173Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065.
EFM65243.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0174Identified by match to protein family HMM PF08876.
rnmV protein networkhttps://string-db.org/network/596315.HMPREF0634_0175Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.
ksgA protein networkhttps://string-db.org/network/596315.HMPREF0634_0176Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
EFM65242.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0177Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65166.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0178N-acetylglucosaminylphosphatidylinositol deacetylase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02585.
tadA protein networkhttps://string-db.org/network/596315.HMPREF0634_0179Putative thiamine-phosphate diphosphorylase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase famil [...]
thiH protein networkhttps://string-db.org/network/596315.HMPREF0634_0180Thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351.
thiG protein networkhttps://string-db.org/network/596315.HMPREF0634_0181Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxy [...]
thiF protein networkhttps://string-db.org/network/596315.HMPREF0634_0182Thiamine biosynthesis protein ThiF; Identified by match to protein family HMM PF00899; match to protein family HMM TIGR02354.
thiS protein networkhttps://string-db.org/network/596315.HMPREF0634_0183Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.
agcS protein networkhttps://string-db.org/network/596315.HMPREF0634_0184Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835.
serS protein networkhttps://string-db.org/network/596315.HMPREF0634_0185serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further co [...]
EFM65172.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0186Hypothetical protein.
EFM65161.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0187Pentapeptide repeat protein; Identified by match to protein family HMM PF00805.
lysA protein networkhttps://string-db.org/network/596315.HMPREF0634_0188Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
EFM65170.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0189Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
EFM65176.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0190Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891.
dapD protein networkhttps://string-db.org/network/596315.HMPREF0634_01912,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
dapB protein networkhttps://string-db.org/network/596315.HMPREF0634_0192Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
dapA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0193Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
asd protein networkhttps://string-db.org/network/596315.HMPREF0634_0194Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
EFM65155.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0195Aspartate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; Belongs to the aspartokinase family.
xth protein networkhttps://string-db.org/network/596315.HMPREF0634_0196Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
tuf protein networkhttps://string-db.org/network/596315.HMPREF0634_0197Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
fusA protein networkhttps://string-db.org/network/596315.HMPREF0634_0198Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/596315.HMPREF0634_0199Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...]
rpsL protein networkhttps://string-db.org/network/596315.HMPREF0634_0200Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50 [...]
EFM65174.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0201Nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
ispF protein networkhttps://string-db.org/network/596315.HMPREF0634_02022-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
ispD protein networkhttps://string-db.org/network/596315.HMPREF0634_02032-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
EFM65181.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0204Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
EFM65154.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0205Thermophilic metalloprotease (M29); Identified by match to protein family HMM PF02073.
EFM65179.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0206Bacterial capsule synthesis protein; Identified by match to protein family HMM PF09587.
EFM65188.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0207Hemerythrin HHE cation binding domain protein; Identified by match to protein family HMM PF01814.
EFM65177.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0208Hypothetical protein.
EFM65189.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0209Hydrid cluster protein-associated redox disulfide domain protein.
EFM65167.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0210Identified by match to protein family HMM PF00149.
trmE protein networkhttps://string-db.org/network/596315.HMPREF0634_0211tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
gidA protein networkhttps://string-db.org/network/596315.HMPREF0634_0212tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
gidB protein networkhttps://string-db.org/network/596315.HMPREF0634_021316S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
EFM65185.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0214Identified by match to protein family HMM PF06742; match to protein family HMM PF06863.
EFM65186.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0215Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM65069.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0216Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.
EFM65059.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0217Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.
EFM65071.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0218Phage prohead protease, HK97 family; Identified by match to protein family HMM PF04586; match to protein family HMM TIGR01543.
EFM65078.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0219Putative phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065.
EFM65081.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0220Hypothetical protein; Identified by glimmer; putative.
EFM65074.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0221Hypothetical protein.
EFM65065.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0222Putative phage head-tail adaptor; Identified by match to protein family HMM TIGR01563.
EFM65056.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0223Hypothetical protein.
EFM65058.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0224Hypothetical protein.
EFM65064.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0225Phage major tail protein, phi13 family; Identified by match to protein family HMM TIGR01603.
EFM65077.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0226Phage tail tape measure protein, TP901 family; Identified by match to protein family HMM PF05017; match to protein family HMM TIGR01760.
EFM65083.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0227Putative phage tail component domain protein; Identified by match to protein family HMM TIGR01633.
EFM65055.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0228Phage minor structural protein, N-terminal domain protein; Identified by match to protein family HMM TIGR01665.
EFM65076.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0229Hypothetical protein.
EFM65068.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0230Hypothetical protein; Identified by glimmer; putative.
EFM65061.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0231Hypothetical protein.
EFM65067.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0232Toxin secretion/phage lysis holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593.
EFM65082.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0233Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183; match to protein family HMM PF01473.
EFM65075.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0234Hypothetical protein.
EFM65073.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0235Hypothetical protein.
EFM65063.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0237BRO family, N-terminal domain protein; Identified by match to protein family HMM PF02498.
EFM65054.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0238Identified by match to protein family HMM PF08000.
EFM65062.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0239Divergent AAA domain protein; Identified by match to protein family HMM PF04326.
EFM65070.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0240DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM65072.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0241DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM65057.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0242Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65079.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0243Hypothetical protein.
EFM65066.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0244DNA-binding helix-turn-helix protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM64329.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0246Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
cdd protein networkhttps://string-db.org/network/596315.HMPREF0634_0247Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
EFM64342.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0248Hypothetical protein; Belongs to the CvfB family.
ybaK protein networkhttps://string-db.org/network/596315.HMPREF0634_0249Identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
EFM64337.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0250S1 RNA binding domain protein; Identified by match to protein family HMM PF00575.
EFM64323.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0251ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64348.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0252Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM64347.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0253Identified by match to protein family HMM PF08903.
EFM64330.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0254Hypothetical protein.
EFM64318.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0255SPFH/Band 7/PHB domain protein; Identified by match to protein family HMM PF01145.
nfeD protein networkhttps://string-db.org/network/596315.HMPREF0634_0256Identified by match to protein family HMM PF01957.
nnrD protein networkhttps://string-db.org/network/596315.HMPREF0634_0257YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted [...]
EFM64343.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0258Peptidase, U32 family; Identified by match to protein family HMM PF01136.
zapA protein networkhttps://string-db.org/network/596315.HMPREF0634_0259Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation [...]
EFM64331.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0260Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalentl [...]
EFM64324.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0261Identified by match to protein family HMM PF00881.
EFM64325.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0262tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
lepA protein networkhttps://string-db.org/network/596315.HMPREF0634_0263GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
rpsT protein networkhttps://string-db.org/network/596315.HMPREF0634_0264Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
EFM64335.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0265Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64326.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0266ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64319.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0267ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
EFM64346.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0268Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
holA protein networkhttps://string-db.org/network/596315.HMPREF0634_0269DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128.
EFM64350.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0270Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
EFM64344.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0271Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
EFM64333.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0272Hypothetical protein.
EFM64328.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0273Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM64327.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0274Identified by match to protein family HMM PF00899.
dnaJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0275Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
dnaK protein networkhttps://string-db.org/network/596315.HMPREF0634_0276Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
grpE protein networkhttps://string-db.org/network/596315.HMPREF0634_0277Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...]
hrcA protein networkhttps://string-db.org/network/596315.HMPREF0634_0278Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
thrS protein networkhttps://string-db.org/network/596315.HMPREF0634_0279threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end [...]
nadK protein networkhttps://string-db.org/network/596315.HMPREF0634_0280NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydr [...]
EFM64702.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0281Putative isocitrate dehydrogenase, NAD-dependent; Identified by match to protein family HMM PF00180.
EFM64712.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0282Putative aconitate hydratase; Identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342.
EFM64707.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0283DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271.
EFM64699.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0284Hypothetical protein.
EFM64706.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0285Putative calcium-translocating P-type ATPase, PMCA-type; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to prot [...]
EFM64711.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0286RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
EFM64688.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0287Hypothetical protein.
EFM64703.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0288Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
noxE protein networkhttps://string-db.org/network/596315.HMPREF0634_0289NADH oxidase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
EFM64708.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0290Identified by match to protein family HMM PF00582.
brnQ protein networkhttps://string-db.org/network/596315.HMPREF0634_0291Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
EFM64704.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0292Hypothetical protein.
EFM64695.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0293Transcriptional regulator; Identified by match to protein family HMM PF02082.
EFM64693.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0294ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64692.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0295Hydrolase, TatD family; Identified by match to protein family HMM PF01026.
EFM64697.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0296HTH domain protein; Identified by match to protein family HMM PF02829; match to protein family HMM PF08279.
EFM64710.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0297Hypothetical protein.
EFM64700.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0298ATPase family associated with various cellular activities (AAA); Identified by match to protein family HMM PF07728.
EFM64689.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0299Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183.
EFM64709.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0300Hypothetical protein.
EFM64690.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0301Hypothetical protein.
EFM64705.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0302LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167.
fhs protein networkhttps://string-db.org/network/596315.HMPREF0634_0303Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.
EFM64701.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0304Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
pyc protein networkhttps://string-db.org/network/596315.HMPREF0634_0305Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate [...]
thiC protein networkhttps://string-db.org/network/596315.HMPREF0634_0306Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methio [...]
thiE protein networkhttps://string-db.org/network/596315.HMPREF0634_0307Thiamine-phosphate diphosphorylase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the thiamine-phosphate synthase family.
thiD protein networkhttps://string-db.org/network/596315.HMPREF0634_0308Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097.
EFM65294.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0309Transporter, auxin efflux carrier (AEC) family protein; Identified by match to protein family HMM PF03547.
cadA protein networkhttps://string-db.org/network/596315.HMPREF0634_0311Cadmium-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match [...]
EFM65290.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0312Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022.
EFM65292.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0313Dinitrogenase iron-molybdenum cofactor; Identified by match to protein family HMM PF02579.
EFM65286.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0314Hypothetical protein.
EFM65289.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0315ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65285.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0316Transcriptional regulator, GntR family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00392.
pta protein networkhttps://string-db.org/network/596315.HMPREF0634_0317Phosphate acetyltransferase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01515; match to protein family HM [...]
EFM64851.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0318Positive regulator of sigma(E), RseC/MucC; Identified by match to protein family HMM PF04246.
EFM64849.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0319Identified by match to protein family HMM PF02583.
aspS protein networkhttps://string-db.org/network/596315.HMPREF0634_0320aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor en [...]
hisS protein networkhttps://string-db.org/network/596315.HMPREF0634_0321histidine--tRNA ligase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.
hemZ protein networkhttps://string-db.org/network/596315.HMPREF0634_0322Coproporphyrinogen dehydrogenase HemZ; Identified by match to protein family HMM PF04055.
EFM64829.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0323Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
dtd protein networkhttps://string-db.org/network/596315.HMPREF0634_0324D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
relA protein networkhttps://string-db.org/network/596315.HMPREF0634_0325RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to c [...]
apt protein networkhttps://string-db.org/network/596315.HMPREF0634_0326Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
recJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0327single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.
EFM64837.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0328Identified by match to protein family HMM PF03109.
EFM64841.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0329six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.
EFM64830.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0330Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM64848.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0331Identified by match to protein family HMM PF08020.
EFM64844.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0332HTH domain protein; Identified by match to protein family HMM PF08220; match to protein family HMM PF08279.
EFM64840.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0333Hypothetical protein.
ptsP protein networkhttps://string-db.org/network/596315.HMPREF0634_0334Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...]
EFM64854.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0335Phosphocarrier, HPr family; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
EFM64847.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0336N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
EFM64846.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0337Cof-like hydrolase; Identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
EFM64835.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0338Cell envelope-like function transcriptional attenuator common domain protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
EFM64836.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0339Cell envelope-like function transcriptional attenuator common domain protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
agcS-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0340Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835.
EFM64818.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0341Identified by match to protein family HMM PF02638; match to protein family HMM PF04122.
EFM64833.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0342Identified by match to protein family HMM PF00877; match to protein family HMM PF01473.
mviN protein networkhttps://string-db.org/network/596315.HMPREF0634_0343Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
EFM64828.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0344Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF027 [...]
EFM64843.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0345Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
EFM64834.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0346Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
EFM64838.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0347CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Identified by match to protein family HMM PF04464.
EFM64826.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0348Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
EFM64819.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0349Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
EFM64823.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0350Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
EFM64825.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0351Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64827.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0352N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520; match to protein family HMM PF04122.
secA protein networkhttps://string-db.org/network/596315.HMPREF0634_0353Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
EFM65305.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0354Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
prmA protein networkhttps://string-db.org/network/596315.HMPREF0634_0355Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
EFM65297.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0356RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
yqeV protein networkhttps://string-db.org/network/596315.HMPREF0634_0357tRNA methylthiotransferase YqeV; Identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR015 [...]
EFM65316.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0358Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family.
EFM65306.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0359Histidine triad domain protein; Identified by match to protein family HMM PF01230.
EFM65317.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_03604Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
pheS protein networkhttps://string-db.org/network/596315.HMPREF0634_0361phenylalanine--tRNA ligase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II a [...]
pheT protein networkhttps://string-db.org/network/596315.HMPREF0634_0362phenylalanine--tRNA ligase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM [...]
EFM65308.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0363ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65310.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0364Cobalt transport protein; Identified by match to protein family HMM PF02361.
EFM65302.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0365Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
EFM65318.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0366ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM65319.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0367ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM65301.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0368Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
uvrC protein networkhttps://string-db.org/network/596315.HMPREF0634_0369Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
hprK protein networkhttps://string-db.org/network/596315.HMPREF0634_0370HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dep [...]
murB protein networkhttps://string-db.org/network/596315.HMPREF0634_0371UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
EFM65315.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0372PHP domain protein; Identified by match to protein family HMM PF02811.
EFM65299.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0373Hypothetical protein; Displays ATPase and GTPase activities.
EFM65314.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0374Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
EFM65304.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0375Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
whiA protein networkhttps://string-db.org/network/596315.HMPREF0634_0376Hypothetical protein; Involved in cell division and chromosome segregation.
dnaE protein networkhttps://string-db.org/network/596315.HMPREF0634_0377DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR005 [...]
EFM64884.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0378Integrase core domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00665.
EFM65250.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0379DNA-binding helix-turn-helix protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01381.
EFM65248.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0380DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM65256.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0381Hypothetical protein.
EFM65254.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0382Hypothetical protein.
EFM65247.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0383Hypothetical protein.
dnaB protein networkhttps://string-db.org/network/596315.HMPREF0634_0384Replicative DNA helicase.
EFM65249.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0385Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
EFM65255.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0386Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589.
EFM65252.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0387HNH endonuclease domain protein; Identified by match to protein family HMM PF01844.
EFM65251.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0388Putative phage terminase, small subunit, P27 family.
EFM65338.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0389Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
alaS protein networkhttps://string-db.org/network/596315.HMPREF0634_0390alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA( [...]
EFM65363.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0391Identified by match to protein family HMM PF06135; Belongs to the UPF0297 family.
EFM65352.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0392Hypothetical protein.
EFM65333.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0393RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
EFM65347.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0394Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
EFM65376.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0395Hypothetical protein.
EFM65379.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0396Oligoendopeptidase, M3 family; Identified by match to protein family HMM PF01432; match to protein family HMM TIGR02289.
rny protein networkhttps://string-db.org/network/596315.HMPREF0634_0397YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
EFM65377.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0398Hypothetical protein.
uppP protein networkhttps://string-db.org/network/596315.HMPREF0634_0399Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
EFM65383.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0400Aminotransferase, class I/II; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212.
EFM65332.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0401Putative UTP--hexose-1-phosphate uridylyltransferase.
glnA protein networkhttps://string-db.org/network/596315.HMPREF0634_0402Glutamate--ammonia ligase, catalytic domain protein; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
EFM65385.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0403Putative pyridoxal kinase; Identified by match to protein family HMM PF08543; Belongs to the pyridoxine kinase family.
cspA protein networkhttps://string-db.org/network/596315.HMPREF0634_0404Cold shock protein CspA; Identified by match to protein family HMM PF00313.
EFM65389.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0405CBS domain protein; Identified by match to protein family HMM PF00571.
EFM65361.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0406Hypothetical protein.
EFM65366.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0407Hypothetical protein.
EFM65381.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0408PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.
EFM65364.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0409ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM65353.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0410ABC transporter transmembrane region; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM65390.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0411Identified by match to protein family HMM PF01594.
EFM65330.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0412Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.
msrB protein networkhttps://string-db.org/network/596315.HMPREF0634_0413methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sul [...]
EFM65351.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0414Threonine/alanine tRNA ligase second additional domain protein; Identified by match to protein family HMM PF07973.
EFM65341.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0415Hypothetical protein; Identified by glimmer; putative.
EFM65368.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0416Hypothetical protein.
xseA protein networkhttps://string-db.org/network/596315.HMPREF0634_0417Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
xseB protein networkhttps://string-db.org/network/596315.HMPREF0634_0418Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
EFM65328.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0419Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
EFM65340.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0420Divergent PAP2 family; Identified by match to protein family HMM PF02681.
dxs protein networkhttps://string-db.org/network/596315.HMPREF0634_04211-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
rrmJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0422Ribosomal RNA large subunit methyltransferase J; Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478.
recN protein networkhttps://string-db.org/network/596315.HMPREF0634_0423DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
EFM65354.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0424Thiamin pyrophosphokinase, catalytic domain protein; Identified by match to protein family HMM PF04263.
EFM65326.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0425Hypothetical protein.
EFM65345.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0426Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
EFM65370.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0427Hypothetical protein.
EFM65374.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0428Hypothetical protein.
EFM65393.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0429Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucl [...]
mltG protein networkhttps://string-db.org/network/596315.HMPREF0634_0430YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
EFM65343.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0431O-methyltransferase; Identified by match to protein family HMM PF01596.
EFM65387.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0432Peptidase, U32 family; Identified by match to protein family HMM PF01136.
ispG protein networkhttps://string-db.org/network/596315.HMPREF0634_04334-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...]
rseP protein networkhttps://string-db.org/network/596315.HMPREF0634_0434RIP metalloprotease RseP; Identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054.
dxr protein networkhttps://string-db.org/network/596315.HMPREF0634_04351-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
clpB protein networkhttps://string-db.org/network/596315.HMPREF0634_0437ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE [...]
metN protein networkhttps://string-db.org/network/596315.HMPREF0634_0439ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
EFM65327.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0440ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM65375.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0441NLPA lipoprotein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family.
EFM65323.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0442Hypothetical protein.
EFM65378.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0443Identified by match to protein family HMM PF06207.
EFM65339.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0444Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
EFM65355.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0445Rubredoxin; Identified by match to protein family HMM PF00301.
EFM65344.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0446Identified by match to protein family HMM PF02588.
EFM65386.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0447MORN repeat protein; Identified by match to protein family HMM PF02493.
dnaG protein networkhttps://string-db.org/network/596315.HMPREF0634_0448DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
rpoD protein networkhttps://string-db.org/network/596315.HMPREF0634_0449RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the p [...]
EFM65369.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0450Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65382.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0451Hypothetical protein.
EFM65360.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0452Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486.
EFM65358.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0453Transcriptional regulator, AbrB family; Identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439.
EFM65392.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0454ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65373.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0455Hypothetical protein.
EFM65350.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0456Leucine Rich Repeat protein; Identified by match to protein family HMM PF00560; match to protein family HMM PF04122.
EFM65367.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0457Hypothetical protein.
miaB protein networkhttps://string-db.org/network/596315.HMPREF0634_0459tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...]
glnS protein networkhttps://string-db.org/network/596315.HMPREF0634_0460glutamine--tRNA ligase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00749; match to protein family HMM PF0 [...]
EFM64512.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0461Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) ( [...]
EFM64518.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0462Hypothetical protein.
EFM64557.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0463Identified by match to protein family HMM PF06738.
EFM64520.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0464Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64519.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0465Cupin domain protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
potA protein networkhttps://string-db.org/network/596315.HMPREF0634_0466Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belo [...]
EFM64535.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0467ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM64511.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0468ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM64517.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0469ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
malQ protein networkhttps://string-db.org/network/596315.HMPREF0634_04704-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
EFM64541.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0471Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128.
glgB protein networkhttps://string-db.org/network/596315.HMPREF0634_04721,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains [...]
glgC protein networkhttps://string-db.org/network/596315.HMPREF0634_0473Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between AT [...]
glgD protein networkhttps://string-db.org/network/596315.HMPREF0634_0474Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092.
glgA protein networkhttps://string-db.org/network/596315.HMPREF0634_0475Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
glgP protein networkhttps://string-db.org/network/596315.HMPREF0634_0476Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanism [...]
EFM64527.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0477Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64513.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0478RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.
EFM64503.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0479Radical SAM domain protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
EFM64510.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0480Na/Pi-cotransporter II-like protein; Identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704.
add protein networkhttps://string-db.org/network/596315.HMPREF0634_0481Adenosine deaminase; Identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430.
EFM64528.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0482Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
EFM64561.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0483Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
EFM64552.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0484GIY-YIG nuclease superfamily protein; Identified by match to protein family HMM PF01541.
pyrC protein networkhttps://string-db.org/network/596315.HMPREF0634_0485Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
EFM64537.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0486Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...]
EFM64514.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0487ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64529.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0488Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
fsa protein networkhttps://string-db.org/network/596315.HMPREF0634_0489Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
EFM64564.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0490Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; mat [...]
maf protein networkhttps://string-db.org/network/596315.HMPREF0634_0491Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nu [...]
EFM64544.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0492Cation diffusion facilitator family transporter; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297.
EFM64526.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0493Identified by match to protein family HMM PF06541.
EFM64532.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0494Hypothetical protein.
EFM64505.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0495Hypothetical protein.
EFM64560.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0496Aspartate racemase; Identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035.
murE protein networkhttps://string-db.org/network/596315.HMPREF0634_0497UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the [...]
EFM64502.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0498Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfam [...]
ychF protein networkhttps://string-db.org/network/596315.HMPREF0634_0499GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
EFM64531.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0500Leucine Rich Repeat protein.
EFM64547.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0501Peptidase M16 inactive domain protein; Identified by match to protein family HMM PF05193.
EFM64553.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0502Peptidase M16 inactive domain protein; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193.
lgt protein networkhttps://string-db.org/network/596315.HMPREF0634_0503Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
mraW protein networkhttps://string-db.org/network/596315.HMPREF0634_0504S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
murF protein networkhttps://string-db.org/network/596315.HMPREF0634_0505UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
mraY protein networkhttps://string-db.org/network/596315.HMPREF0634_0506phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murD protein networkhttps://string-db.org/network/596315.HMPREF0634_0507UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCD [...]
murG protein networkhttps://string-db.org/network/596315.HMPREF0634_0508Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide [...]
ftsZ protein networkhttps://string-db.org/network/596315.HMPREF0634_0509Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
nrdR protein networkhttps://string-db.org/network/596315.HMPREF0634_0510Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
EFM64523.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0511Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64534.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0512ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
der protein networkhttps://string-db.org/network/596315.HMPREF0634_0513Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA ( [...]
plsY protein networkhttps://string-db.org/network/596315.HMPREF0634_0514Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). Th [...]
gpsA protein networkhttps://string-db.org/network/596315.HMPREF0634_0515Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF02737; match to protein family [...]
EFM64549.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0516Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
sepF protein networkhttps://string-db.org/network/596315.HMPREF0634_0517Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of F [...]
EFM64536.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0518Hypothetical protein.
EFM64556.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0519S4 domain protein; Identified by match to protein family HMM PF01479.
EFM64551.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0520DivIVA domain protein; Identified by match to protein family HMM PF05103; match to protein family HMM TIGR03544.
ileS protein networkhttps://string-db.org/network/596315.HMPREF0634_0521isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such err [...]
EFM64554.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0522Identified by match to protein family HMM PF04991.
EFM64539.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0523Cell wall-binding repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473.
EFM64446.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0524Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64360.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0525Type I phosphodiesterase / nucleotide pyrophosphatase; Identified by match to protein family HMM PF01663.
EFM64383.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0526Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
ade protein networkhttps://string-db.org/network/596315.HMPREF0634_0527Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
EFM64407.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0528Putative phage head-tail adaptor; Identified by match to protein family HMM PF03780.
EFM64462.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0529DAK2 domain fusion protein YloV; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR03599.
recG protein networkhttps://string-db.org/network/596315.HMPREF0634_0530ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
EFM64418.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0531RNA methyltransferase, RsmD family; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.
coaD protein networkhttps://string-db.org/network/596315.HMPREF0634_0532Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
tmcAL protein networkhttps://string-db.org/network/596315.HMPREF0634_0533Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to [...]
ackA protein networkhttps://string-db.org/network/596315.HMPREF0634_0534Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
EFM64380.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0535Putative ACR, COG1399; Identified by match to protein family HMM PF02620.
rpmF protein networkhttps://string-db.org/network/596315.HMPREF0634_0536Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.
plsX protein networkhttps://string-db.org/network/596315.HMPREF0634_0537Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...]
fbp protein networkhttps://string-db.org/network/596315.HMPREF0634_0538Firmicute fructose-1,6-bisphosphatase; Identified by match to protein family HMM PF06874.
EFM64367.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0539Identified by match to protein family HMM PF03780.
nusB protein networkhttps://string-db.org/network/596315.HMPREF0634_0540Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...]
EFM64461.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0541Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64384.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0542Histidine kinase A domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
EFM64389.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0543ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64497.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0544Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64435.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0545ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
EFM64357.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0546Identified by match to protein family HMM PF07009.
ung protein networkhttps://string-db.org/network/596315.HMPREF0634_0547uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
EFM64442.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0548Identified by match to protein family HMM PF01902.
EFM64431.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0549SH3 domain protein; Identified by match to protein family HMM PF08460.
EFM64485.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0550Identified by match to protein family HMM PF09424.
rpsU protein networkhttps://string-db.org/network/596315.HMPREF0634_0551Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
pfkA protein networkhttps://string-db.org/network/596315.HMPREF0634_05526-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
pyk protein networkhttps://string-db.org/network/596315.HMPREF0634_0553Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the [...]
rumA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_055423S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I- [...]
EFM64486.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0555Hypothetical protein.
repA protein networkhttps://string-db.org/network/596315.HMPREF0634_0556Identified by match to protein family HMM PF06970.
EFM64382.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0557Hypothetical protein.
EFM64483.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0558Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64416.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0559Identified by match to protein family HMM PF02534.
EFM64355.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0560Hypothetical protein.
EFM64415.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0561Hypothetical protein.
EFM64448.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0562Hypothetical protein.
EFM64359.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0563Hypothetical protein.
EFM64417.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0564Hypothetical protein.
EFM64365.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0565Hypothetical protein.
EFM64375.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0566Hypothetical protein.
EFM64368.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0567Hypothetical protein.
EFM64373.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0568Hypothetical protein.
EFM64427.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0569DNA topoisomerase; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751.
EFM64467.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0570Divergent AAA domain protein; Identified by match to protein family HMM PF04326.
EFM64411.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0571Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF02384.
EFM64408.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0572Single-strand binding family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM64374.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0573Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
EFM64459.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0574Hypothetical protein.
EFM64372.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0575Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
EFM64463.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0576ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64401.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0577ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
feoA protein networkhttps://string-db.org/network/596315.HMPREF0634_0578FeoA domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be m [...]
EFM64457.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0579Putative ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (T [...]
EFM64460.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0580Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64491.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0581Sigma-70, region 4; Identified by match to protein family HMM PF04545; overlaps another CDS with the same product name.
EFM64423.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0582Hypothetical protein.
EFM64395.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0583Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508.
EFM64466.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0584Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508.
dcm protein networkhttps://string-db.org/network/596315.HMPREF0634_0585DNA (cytosine-5-)-methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675.
EFM64438.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0586ATPase family associated with various cellular activities (AAA); Identified by match to protein family HMM PF07728.
EFM64465.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0587Hypothetical protein.
EFM64422.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0588Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271.
EFM64481.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0589RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; match to protein family [...]
EFM64429.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0590Hypothetical protein.
EFM64473.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0591Hypothetical protein.
EFM64449.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0592Hypothetical protein.
EFM64413.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0593Transposase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...]
EFM64489.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0594Hypothetical protein.
EFM64479.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0595Hypothetical protein.
EFM64421.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0596Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64371.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0597Hypothetical protein.
EFM64428.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0598Identified by match to protein family HMM PF04402.
EFM64369.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0600Transposase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...]
EFM64493.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0601Hypothetical protein.
EFM64414.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0602Identified by match to protein family HMM PF00903.
EFM64472.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0603FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
EFM64496.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0604Hypothetical protein.
EFM64494.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0605Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64377.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0606ATPase, AAA family; Identified by match to protein family HMM PF00004.
EFM64480.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0607Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64437.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0608Hypothetical protein.
EFM64352.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0609Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64390.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0610Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64388.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0611Hypothetical protein.
EFM64430.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0612Hypothetical protein.
EFM64474.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0613Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
EFM64452.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0614CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
EFM64424.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0615Identified by match to protein family HMM PF07799.
EFM64470.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0616Hypothetical protein.
EFM64397.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0617Hypothetical protein.
EFM64412.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0618Hypothetical protein.
EFM64471.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0619Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
EFM64495.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0620Restriction endonuclease; Identified by match to protein family HMM PF04471.
EFM64443.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0621Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64492.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0622Hypothetical protein.
EFM64425.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0623FMN-binding domain protein; Identified by match to protein family HMM PF04205; overlaps another CDS with the same product name.
EFM64370.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0624FMN-binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need [...]
EFM64440.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0625Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM64433.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0626Putative pyruvate, water dikinase; Identified by match to protein family HMM PF00391; match to protein family HMM PF01326.
EFM64381.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0627Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
traX protein networkhttps://string-db.org/network/596315.HMPREF0634_0628Protein TraX; Identified by match to protein family HMM PF05857.
EFM64444.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0629Hypothetical protein.
dhaD protein networkhttps://string-db.org/network/596315.HMPREF0634_0630Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465; match to protein family HMM PF01761.
EFM64478.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0631Rubredoxin; Identified by match to protein family HMM PF00301.
EFM64400.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0632Chromate transport protein; Identified by match to protein family HMM PF02417.
EFM64426.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0633Chromate transport protein; Identified by match to protein family HMM PF02417.
EFM64436.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0634Hypothetical protein.
map protein networkhttps://string-db.org/network/596315.HMPREF0634_0635Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
infC protein networkhttps://string-db.org/network/596315.HMPREF0634_0636Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enha [...]
rpmI protein networkhttps://string-db.org/network/596315.HMPREF0634_0637Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
rplT protein networkhttps://string-db.org/network/596315.HMPREF0634_0638Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...]
EFM64358.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_06403D domain protein; Identified by match to protein family HMM PF01473; match to protein family HMM PF06725.
EFM64362.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0641DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
ruvC protein networkhttps://string-db.org/network/596315.HMPREF0634_0642Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
ruvA protein networkhttps://string-db.org/network/596315.HMPREF0634_0643Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvB protein networkhttps://string-db.org/network/596315.HMPREF0634_0644Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
queA protein networkhttps://string-db.org/network/596315.HMPREF0634_0645S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...]
tgt protein networkhttps://string-db.org/network/596315.HMPREF0634_0646tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in t [...]
yajC protein networkhttps://string-db.org/network/596315.HMPREF0634_0647Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.
EFM64391.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0648rSAM-modified six-cysteine peptide; Identified by match to protein family HMM TIGR03973.
EFM64387.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0649Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64455.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0650Arylsulfatase; Identified by match to protein family HMM PF00884.
EFM64378.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0651Potassium uptake protein, TrkH family; Identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933.
trkA protein networkhttps://string-db.org/network/596315.HMPREF0634_0652TrkA N-terminal domain protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
EFM64488.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0653RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; Belongs to the class IV-like SAM-binding methyltransferase superfamily. [...]
EFM64394.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0654HTH domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF08279.
EFM64490.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0655Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylat [...]
ppdK protein networkhttps://string-db.org/network/596315.HMPREF0634_0656Pyruvate, phosphate dikinase; Identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; B [...]
nagB protein networkhttps://string-db.org/network/596315.HMPREF0634_0657Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
EFM64406.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0658Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; mat [...]
efp protein networkhttps://string-db.org/network/596315.HMPREF0634_0659Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...]
rnc protein networkhttps://string-db.org/network/596315.HMPREF0634_0660Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
EFM64451.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0661Radical SAM domain protein; Identified by match to protein family HMM PF04055.
smc protein networkhttps://string-db.org/network/596315.HMPREF0634_0662Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
ftsY protein networkhttps://string-db.org/network/596315.HMPREF0634_0663Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
EFM64396.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0664Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64410.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0665Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64447.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0666Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508; overlaps another CDS with the same product name.
EFM64353.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0667Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508; overlaps another CDS with the same product name.
EFM64392.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0668Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
EFM64402.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0669N-6 DNA Methylase; Identified by match to protein family HMM PF02384.
EFM64364.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0670Type I restriction modification DNA specificity domain protein; Identified by match to protein family HMM PF01420.
hsdR protein networkhttps://string-db.org/network/596315.HMPREF0634_0671Type I site-specific deoxyribonuclease, HsdR family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04313; ma [...]
EFM64664.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0672Collagen binding domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05737; match to protein famil [...]
EFM64670.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0673Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64678.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0674Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64676.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0675Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM64680.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0676Hypothetical protein.
EFM64677.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0677Hypothetical protein.
EFM64669.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0678Hypothetical protein.
EFM64672.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0679Hypothetical protein.
EFM64658.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0680Hypothetical protein.
EFM64660.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0681Identified by match to protein family HMM PF08349.
EFM64671.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0682Identified by match to protein family HMM PF08974.
EFM64655.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0683SEFIR domain protein; Identified by match to protein family HMM PF08357.
EFM64675.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0686Hypothetical protein.
EFM64656.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0687Helicase C-terminal domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.
EFM64682.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0688Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281.
EFM64673.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0689Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
EFM64659.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0690Cobalt transport protein; Identified by match to protein family HMM PF02361.
EFM64683.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0691ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64657.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0692ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64674.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0693ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64684.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0694Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM64663.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0695Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
cagZ protein networkhttps://string-db.org/network/596315.HMPREF0634_0696CagZ.
EFM64662.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0697Identified by match to protein family HMM PF03235.
hsdR-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0698Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
EFM64679.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0699Hypothetical protein.
EFM64654.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0700Hypothetical protein.
EFM64685.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0701Hypothetical protein.
EFM64653.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0702Phage integrase SAM-like domain protein; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
EFM64667.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0703Type I restriction modification DNA specificity domain protein; Identified by match to protein family HMM PF01420.
EFM64665.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0704Putative type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384.
EFM64681.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0705DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM64816.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_07062-hydroxyglutaryl-CoA dehydratase, D-component; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
fldB protein networkhttps://string-db.org/network/596315.HMPREF0634_0707R-phenyllactate dehydratase, medium subunit; Identified by match to protein family HMM PF06050.
hadA protein networkhttps://string-db.org/network/596315.HMPREF0634_0708Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
EFM64796.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0709Hypothetical protein.
EFM64806.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0710Sigma-54 interaction domain protein; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954.
secA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0711Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
EFM64810.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0712Hypothetical protein.
EFM64803.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0713comF family protein.
recD2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0714Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase a [...]
metK protein networkhttps://string-db.org/network/596315.HMPREF0634_0715Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet format [...]
ftsA protein networkhttps://string-db.org/network/596315.HMPREF0634_0716Cell shape determining protein, MreB/Mrl family; Identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904.
murA protein networkhttps://string-db.org/network/596315.HMPREF0634_0717UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
EFM64812.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0718Hypothetical protein.
glmM protein networkhttps://string-db.org/network/596315.HMPREF0634_0719Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
EFM64813.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_07202-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; Identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175.
EFM64808.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0721Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; Identified by match to protein family HMM PF02775.
EFM64795.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_07223-methyl-2-oxobutanoate dehydrogenase (ferredoxin); Identified by match to protein family HMM PF01855.
EFM64804.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_07234Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
EFM64799.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0724Hypothetical protein.
buk protein networkhttps://string-db.org/network/596315.HMPREF0634_0725Butyrate kinase; Identified by match to protein family HMM PF00871; match to protein family HMM TIGR02707; Belongs to the acetokinase family.
EFM64814.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0726YbbR-like protein.
dacA protein networkhttps://string-db.org/network/596315.HMPREF0634_0727TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
EFM65320.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0728Transposase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64793.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0729Radical SAM domain protein; Identified by match to protein family HMM PF04055; overlaps another CDS with the same product name.
EFM64792.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0730Radical SAM domain protein; Identified by match to protein family HMM PF04055; overlaps another CDS with the same product name.
EFM64794.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0731Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM65430.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0732Transporter, CPA2 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00999.
EFM65402.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0733Hypothetical protein.
pepT protein networkhttps://string-db.org/network/596315.HMPREF0634_0734Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
EFM65449.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0735Hypothetical protein.
EFM65397.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0736Identified by match to protein family HMM PF06177.
rpmG protein networkhttps://string-db.org/network/596315.HMPREF0634_0737Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
secE protein networkhttps://string-db.org/network/596315.HMPREF0634_0738Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
nusG protein networkhttps://string-db.org/network/596315.HMPREF0634_0739Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/596315.HMPREF0634_0740Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/596315.HMPREF0634_0741Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplJ protein networkhttps://string-db.org/network/596315.HMPREF0634_0742Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein [...]
rplL protein networkhttps://string-db.org/network/596315.HMPREF0634_0743Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...]
EFM65447.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0744Hypothetical protein.
EFM65432.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0745Identified by match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
EFM65417.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0746Hypothetical protein.
EFM65410.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0747Hypothetical protein.
EFM65440.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0748Transcriptional regulator, PadR family; Identified by match to protein family HMM PF03551.
EFM65420.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0749Hypothetical protein.
EFM65433.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0750Hypothetical protein.
pyrF protein networkhttps://string-db.org/network/596315.HMPREF0634_0751Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
carA protein networkhttps://string-db.org/network/596315.HMPREF0634_0752Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA fam [...]
carB protein networkhttps://string-db.org/network/596315.HMPREF0634_0753Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family H [...]
cysE protein networkhttps://string-db.org/network/596315.HMPREF0634_0754Serine O-acetyltransferase; Identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172.
cysK protein networkhttps://string-db.org/network/596315.HMPREF0634_0755Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139.
EFM65421.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0756Hypothetical protein.
EFM65398.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0757YbaK/proline--tRNA ligase associated domain protein; Identified by match to protein family HMM PF04073.
EFM65428.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0758Ferritin-like protein; Iron-storage protein.
EFM65396.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0759Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM65405.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0760Hypothetical protein.
EFM65450.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0761RNA pseudouridine synthase; Identified by match to protein family HMM PF00849.
EFM65445.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0762Hypothetical protein.
EFM65446.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0763Identified by match to protein family HMM PF02810.
EFM65448.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0764Identified by match to protein family HMM PF06257.
EFM65412.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0765Hypothetical protein.
ispE protein networkhttps://string-db.org/network/596315.HMPREF0634_07664-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
EFM65411.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0767FCD domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
murI protein networkhttps://string-db.org/network/596315.HMPREF0634_0768Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
EFM65416.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0769Identified by match to protein family HMM PF09148.
tilS protein networkhttps://string-db.org/network/596315.HMPREF0634_0770tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
hflB protein networkhttps://string-db.org/network/596315.HMPREF0634_0771ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
EFM65424.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0772Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
birA protein networkhttps://string-db.org/network/596315.HMPREF0634_0773biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
coaX protein networkhttps://string-db.org/network/596315.HMPREF0634_0774Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
EFM65413.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0775TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridin [...]
EFM65443.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0776CoA transferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merge [...]
EFM65408.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0777Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65441.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0778Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM65422.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0779Methyltransferase domain protein; Identified by match to protein family HMM PF08241.
EFM65404.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0780Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM [...]
thrB protein networkhttps://string-db.org/network/596315.HMPREF0634_0781Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
thrC protein networkhttps://string-db.org/network/596315.HMPREF0634_0782Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
EFM65434.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0783Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF03447.
asd-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0784Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
EFM65418.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_07856-O-methylguanine DNA methyltransferase, DNA binding domain protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in [...]
tkt protein networkhttps://string-db.org/network/596315.HMPREF0634_0786Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
EFM65484.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0787Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65461.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0788Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
acpP protein networkhttps://string-db.org/network/596315.HMPREF0634_0789Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
EFM65455.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0790Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
EFM65489.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0791Transcriptional regulator, GntR family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene mod [...]
EFM65469.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0792Identified by match to protein family HMM PF05979.
EFM65478.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0793Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
polA protein networkhttps://string-db.org/network/596315.HMPREF0634_0794DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
coaE protein networkhttps://string-db.org/network/596315.HMPREF0634_0795dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
EFM65487.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0796Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
EFM65456.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0797Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.
EFM65482.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0798SH3 domain protein; Identified by match to protein family HMM PF00018; match to protein family HMM PF00877; match to protein family HMM PF06347; match to protein family HMM PF08239.
rnfC protein networkhttps://string-db.org/network/596315.HMPREF0634_0799Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
rnfD protein networkhttps://string-db.org/network/596315.HMPREF0634_0800Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD fam [...]
rnfG protein networkhttps://string-db.org/network/596315.HMPREF0634_0801Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
rnfE protein networkhttps://string-db.org/network/596315.HMPREF0634_0802Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfA protein networkhttps://string-db.org/network/596315.HMPREF0634_0803Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfB protein networkhttps://string-db.org/network/596315.HMPREF0634_0804Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
radC protein networkhttps://string-db.org/network/596315.HMPREF0634_0805DNA repair protein RadC; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.
mreB protein networkhttps://string-db.org/network/596315.HMPREF0634_0806Cell shape determining protein, MreB/Mrl family; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.
mreC protein networkhttps://string-db.org/network/596315.HMPREF0634_0807Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
mreD protein networkhttps://string-db.org/network/596315.HMPREF0634_0808Rod shape-determining protein MreD; Identified by match to protein family HMM TIGR03426.
EFM65458.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0809Penicillin-binding protein dimerization domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
EFM65465.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0810Putative rod shape-determining protein RodA; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
EFM65483.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0811Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM65460.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0812Radical SAM-linked protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need [...]
EFM65462.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0813Ribonuclease, Rne/Rng family.
rnz protein networkhttps://string-db.org/network/596315.HMPREF0634_0814Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs [...]
crcB protein networkhttps://string-db.org/network/596315.HMPREF0634_0815Putative protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
crcB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0816Putative protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
recX protein networkhttps://string-db.org/network/596315.HMPREF0634_0817Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
nadD protein networkhttps://string-db.org/network/596315.HMPREF0634_0818Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
EFM65472.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0819Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR00488.
leuS protein networkhttps://string-db.org/network/596315.HMPREF0634_0820leucine--tRNA ligase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs t [...]
EFM65468.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0821Putative membrane protein; Identified by match to protein family HMM PF00892.
rplU protein networkhttps://string-db.org/network/596315.HMPREF0634_0822Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
EFM65475.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0823Identified by match to protein family HMM PF04327.
rpmA protein networkhttps://string-db.org/network/596315.HMPREF0634_0824Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
cgtA protein networkhttps://string-db.org/network/596315.HMPREF0634_0825Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a ro [...]
EFM65491.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0826Putative RNA-binding protein, YhbY family; Identified by match to protein family HMM PF01985.
ilvA protein networkhttps://string-db.org/network/596315.HMPREF0634_0827Threonine ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127.
EFM65488.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0828Putative endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004.
EFM64096.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0829Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64066.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0830Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.
EFM64048.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0831Histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
EFM64053.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0832ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64083.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0833Hypothetical protein.
EFM64015.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0834Hypothetical protein.
EFM64045.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0835Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM [...]
EFM64046.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0837Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
EFM64040.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0838LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167.
EFM64091.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0839LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167.
EFM64014.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0840Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; overlaps another CDS with the same product name.
EFM64080.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0841Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; overlaps another CDS with the same product name.
EFM64036.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0842Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076.
ribD protein networkhttps://string-db.org/network/596315.HMPREF0634_0843Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...]
ribE protein networkhttps://string-db.org/network/596315.HMPREF0634_0844Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
ribB protein networkhttps://string-db.org/network/596315.HMPREF0634_08453,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GT [...]
ribH protein networkhttps://string-db.org/network/596315.HMPREF0634_08466,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
EFM64022.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0847Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.
asrA protein networkhttps://string-db.org/network/596315.HMPREF0634_0848Sulfite reductase, subunit A; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02910.
asrB protein networkhttps://string-db.org/network/596315.HMPREF0634_0849Sulfite reductase, subunit B; Identified by match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02911.
asrC protein networkhttps://string-db.org/network/596315.HMPREF0634_0850Sulfite reductase, subunit C; Identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02912; B [...]
fnt protein networkhttps://string-db.org/network/596315.HMPREF0634_0851Formate/nitrite transporter; Identified by match to protein family HMM PF01226.
EFM64057.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0852Transcriptional regulator, PadR family; Identified by match to protein family HMM PF03551.
EFM64073.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0853Hypothetical protein.
EFM64012.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0854Hypothetical protein.
dcd protein networkhttps://string-db.org/network/596315.HMPREF0634_0855dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
bioB protein networkhttps://string-db.org/network/596315.HMPREF0634_0856Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...]
hemC protein networkhttps://string-db.org/network/596315.HMPREF0634_0857Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
cobA protein networkhttps://string-db.org/network/596315.HMPREF0634_0858uroporphyrinogen-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.
hemB protein networkhttps://string-db.org/network/596315.HMPREF0634_0859Porphobilinogen synthase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.
EFM64071.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0860Siroheme synthase domain protein.
EFM64030.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0861Putative ATP-dependent DNA helicase PcrA; Identified by match to protein family HMM PF00580.
EFM64024.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0862Aminopeptidase I zinc metalloprotease (M18); Identified by match to protein family HMM PF02127.
EFM64090.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0863Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belon [...]
EFM64059.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0864DHHA2 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02833.
queH protein networkhttps://string-db.org/network/596315.HMPREF0634_08655-formyltetrahydrofolate cyclo-ligase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA( [...]
EFM64033.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0866ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64085.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0867Putative ATP synthase F0, A subunit.
EFM64088.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0868Identified by match to protein family HMM PF08984.
EFM64095.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0869Identified by match to protein family HMM PF02492.
EFM64019.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0870ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64037.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0871Hydrolase, alpha/beta domain protein; Identified by match to protein family HMM PF00561.
EFM64052.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0872Hypothetical protein.
EFM64058.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0873ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM64072.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0874ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64070.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0875Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64009.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0876Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00258; match to protein family HMM PF00753.
dut protein networkhttps://string-db.org/network/596315.HMPREF0634_0877dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP s [...]
nadA protein networkhttps://string-db.org/network/596315.HMPREF0634_0878Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
EFM64051.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0879FAD binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF07992.
nadC protein networkhttps://string-db.org/network/596315.HMPREF0634_0880Nicotinate-nucleotide diphosphorylase (carboxylating); Identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; Belongs to th [...]
dinB protein networkhttps://string-db.org/network/596315.HMPREF0634_0881ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismat [...]
gnd protein networkhttps://string-db.org/network/596315.HMPREF0634_0882Phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
zwf protein networkhttps://string-db.org/network/596315.HMPREF0634_0883Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
trxB protein networkhttps://string-db.org/network/596315.HMPREF0634_0884Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
EFM64097.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0885Peptidase propeptide and YPEB domain protein; Identified by match to protein family HMM PF03413.
trkA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_0886Potassium transporter peripheral membrane component; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
EFM64093.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0887Potassium uptake protein, TrkH family; Identified by match to protein family HMM PF02386.
purA protein networkhttps://string-db.org/network/596315.HMPREF0634_0888Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the [...]
purB protein networkhttps://string-db.org/network/596315.HMPREF0634_0889Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
EFM64020.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0890Identified by match to protein family HMM PF06161.
EFM64032.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0891Identified by match to protein family HMM PF04304.
EFM64035.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0892Iron transport-associated domain protein.
isdE protein networkhttps://string-db.org/network/596315.HMPREF0634_0893Heme ABC transporter, heme-binding protein isdE; Identified by match to protein family HMM PF01497; match to protein family HMM TIGR03659.
EFM64026.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0894Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. F [...]
EFM64018.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0895ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64029.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0896Putative cell wall protein V; Identified by match to protein family HMM PF04122; match to protein family HMM PF05031.
EFM64039.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0897Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64078.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0898ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or t [...]
EFM64031.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0899Formiminotransferase-cyclodeaminase; Identified by match to protein family HMM PF04961.
folD protein networkhttps://string-db.org/network/596315.HMPREF0634_0900Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of [...]
EFM64064.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0901Chloride transporter, ClC family; Identified by match to protein family HMM PF00654; match to protein family HMM PF02080.
EFM64016.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0902UvrD/REP helicase; Identified by match to protein family HMM PF00580.
EFM64042.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0903Identified by match to protein family HMM PF00565.
pdxS protein networkhttps://string-db.org/network/596315.HMPREF0634_0904Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia [...]
EFM64074.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0905Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
EFM64025.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0906Identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106.
EFM64028.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0907Hypothetical protein.
dltD protein networkhttps://string-db.org/network/596315.HMPREF0634_0908DltD C-terminal domain protein; Identified by match to protein family HMM PF04918.
EFM64060.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0910Putative D-alanine--poly(phosphoribitol) ligase, subunit 1; Identified by match to protein family HMM PF00501; Belongs to the ATP-dependent AMP-binding enzyme family.
EFM64038.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0911MBOAT family protein; Could be involved in the transport of activated D-alanine through the membrane.
dltC protein networkhttps://string-db.org/network/596315.HMPREF0634_0912D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D- [...]
EFM64011.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0913ErfK/YbiS/YcfS/YnhG; Identified by match to protein family HMM PF03734.
EFM64092.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0914Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [...]
EFM64081.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0915Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; [...]
EFM64087.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0916Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925.
EFM64086.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0917Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
mprF protein networkhttps://string-db.org/network/596315.HMPREF0634_0918Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major componen [...]
rpoN protein networkhttps://string-db.org/network/596315.HMPREF0634_0919RNA polymerase sigma-54 factor; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00309; match to protein family [...]
EFM65196.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0921Putative cell wall binding repeat 2; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM65234.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0922Putative cell wall binding repeat 2; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM65220.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0923Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM65232.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0924Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM65194.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0925Histidine kinase A domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672.
EFM65213.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0926Hypothetical protein.
sigH protein networkhttps://string-db.org/network/596315.HMPREF0634_0927RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02859; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor fami [...]
EFM65193.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0928Identified by match to protein family HMM PF05991.
EFM65222.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0929RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...]
mrnC protein networkhttps://string-db.org/network/596315.HMPREF0634_0930RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc proces [...]
cysS protein networkhttps://string-db.org/network/596315.HMPREF0634_0931cysteine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs [...]
EFM65228.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0932Papain family cysteine protease; Identified by match to protein family HMM PF00112; match to protein family HMM PF04122.
EFM65217.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0933Identified by match to protein family HMM PF09323; match to protein family HMM TIGR03943.
EFM65218.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0934Putative permease; Identified by match to protein family HMM PF03773.
EFM65227.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0935Transporter, small conductance mechanosensitive ion channel MscS family protein; Identified by match to protein family HMM PF00924; match to protein family HMM PF05552.
EFM65209.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0936HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
EFM65203.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0937RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protei [...]
EFM65223.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0938Putative anti-sigma B factor; Identified by match to protein family HMM PF02518.
EFM65201.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0939STAS domain protein; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.
gyrA protein networkhttps://string-db.org/network/596315.HMPREF0634_0940DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
gyrB protein networkhttps://string-db.org/network/596315.HMPREF0634_0941DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
recF protein networkhttps://string-db.org/network/596315.HMPREF0634_0942DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...]
EFM65207.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0943S4 domain protein; Identified by match to protein family HMM PF01479.
dnaN protein networkhttps://string-db.org/network/596315.HMPREF0634_0944DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
dnaA protein networkhttps://string-db.org/network/596315.HMPREF0634_0945Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
rpmH protein networkhttps://string-db.org/network/596315.HMPREF0634_0946Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.
rnpA protein networkhttps://string-db.org/network/596315.HMPREF0634_0947Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
EFM65204.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0948Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
EFM65197.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0949Membrane protein insertase, YidC/Oxa1 family; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592.
EFM65205.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0950R3H domain protein; Identified by match to protein family HMM PF01424.
EFM65210.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0951Superoxide dismutase, Mn/Fe family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase fa [...]
EFM65200.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0952Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
EFM65219.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0953Hypothetical protein.
panB protein networkhttps://string-db.org/network/596315.HMPREF0634_09543-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to [...]
panC protein networkhttps://string-db.org/network/596315.HMPREF0634_0955Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase f [...]
brnQ-3 protein networkhttps://string-db.org/network/596315.HMPREF0634_0956Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
EFM65235.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0957O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326.
EFM65215.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0958Methyltransferase domain protein; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.
EFM65230.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0959Hypothetical protein.
EFM65191.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0960Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383.
EFM65233.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0961Identified by match to protein family HMM PF01569.
EFM65208.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0962Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM65216.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0963Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM65212.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0964Identified by match to protein family HMM PF06107.
EFM65229.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0965Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
EFM64280.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0966Class II glutamine amidotransferase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00310; match to protein f [...]
rnhB protein networkhttps://string-db.org/network/596315.HMPREF0634_0967Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
alr protein networkhttps://string-db.org/network/596315.HMPREF0634_0968Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
ylqF protein networkhttps://string-db.org/network/596315.HMPREF0634_0969Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
rplS protein networkhttps://string-db.org/network/596315.HMPREF0634_0970Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
tyrS protein networkhttps://string-db.org/network/596315.HMPREF0634_0971tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tR [...]
EFM64250.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0972Transporter gate domain protein.
trmD protein networkhttps://string-db.org/network/596315.HMPREF0634_0973tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rimM protein networkhttps://string-db.org/network/596315.HMPREF0634_097416S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
EFM64275.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0975Hypothetical protein; Belongs to the UPF0109 family.
rpsP protein networkhttps://string-db.org/network/596315.HMPREF0634_0976Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.
ffh protein networkhttps://string-db.org/network/596315.HMPREF0634_0977Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
EFM64272.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0978Helix-turn-helix protein, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a [...]
aspT protein networkhttps://string-db.org/network/596315.HMPREF0634_0979Aspartate-alanine antiporter; Identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625; match to protein family HMM TIGR03802.
aspD protein networkhttps://string-db.org/network/596315.HMPREF0634_0980Aspartate 4-decarboxylase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR03801.
EFM64240.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0981Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64284.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0982Transposase-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...]
EFM64256.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0983Hypothetical protein.
EFM64279.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0984Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508.
EFM64246.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0985Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508.
EFM64269.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0986Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508.
EFM64260.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0987Hypothetical protein.
EFM64281.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0988Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64254.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0989ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM64259.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0990ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64261.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0991Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
EFM64243.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0992Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM64270.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0993Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM64244.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0994Radical SAM domain protein; Identified by match to protein family HMM PF04055.
EFM64271.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0995DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
EFM64242.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0996Hypothetical protein.
EFM64274.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0997Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
EFM64288.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0998Hypothetical protein.
EFM64282.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_0999Putative D-tyrosyl-tRNA(Tyr) deacylase; Identified by match to protein family HMM PF00271; match to protein family HMM PF02384.
EFM64245.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1000Divergent AAA domain protein; Identified by match to protein family HMM PF04326.
EFM64262.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1001Hypothetical protein.
EFM64278.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1002DNA topoisomerase; Identified by match to protein family HMM PF01131; match to protein family HMM PF01751.
EFM64258.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1003Hypothetical protein.
EFM64277.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1004Hypothetical protein.
EFM64255.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1005Identified by match to protein family HMM PF00877.
EFM64267.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1006Hypothetical protein.
EFM64276.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1007Hypothetical protein.
EFM64247.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1008Hypothetical protein.
EFM64285.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1009Hypothetical protein.
EFM64265.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1010Hypothetical protein.
EFM64283.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1011Identified by match to protein family HMM PF02534.
EFM64241.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1012BRO family, N-terminal domain protein; Identified by match to protein family HMM PF02498.
EFM64249.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1013Hypothetical protein.
EFM64251.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1014Hypothetical protein.
sstT protein networkhttps://string-db.org/network/596315.HMPREF0634_1015Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). [...]
uvrA protein networkhttps://string-db.org/network/596315.HMPREF0634_1016Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
EFM64002.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1017Identified by match to protein family HMM PF00881.
uvrB protein networkhttps://string-db.org/network/596315.HMPREF0634_1018Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...]
EFM63977.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1019Identified by match to protein family HMM PF01594.
panD protein networkhttps://string-db.org/network/596315.HMPREF0634_1020Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
EFM63998.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1021Putative membrane protein; Identified by match to protein family HMM PF00892.
EFM63980.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1022Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
brnQ-4 protein networkhttps://string-db.org/network/596315.HMPREF0634_1023Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
pdxB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_10244-phosphoerythronate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
etfA protein networkhttps://string-db.org/network/596315.HMPREF0634_1025Electron transfer flavoprotein FAD-binding domain protein; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
etfB protein networkhttps://string-db.org/network/596315.HMPREF0634_1026Electron transfer flavoprotein domain protein; Identified by match to protein family HMM PF01012.
acd protein networkhttps://string-db.org/network/596315.HMPREF0634_1027acyl-CoA dehydrogenase, C-terminal domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein fa [...]
EFM63992.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_10282-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.
fldB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1029R-phenyllactate dehydratase, medium subunit; Identified by match to protein family HMM PF06050.
fldA protein networkhttps://string-db.org/network/596315.HMPREF0634_1030cinnamoyl-CoA:phenyllactate CoA-transferase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
EFM63984.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1031Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
EFM64000.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1032Iron transport-associated domain protein; Identified by match to protein family HMM PF04122.
argH protein networkhttps://string-db.org/network/596315.HMPREF0634_1033Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.
argG protein networkhttps://string-db.org/network/596315.HMPREF0634_1034Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
EFM64001.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1035ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
EFM63987.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1036Hypothetical protein.
EFM63979.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1038Transposase; Identified by match to protein family HMM PF01527.
smpB protein networkhttps://string-db.org/network/596315.HMPREF0634_1040SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
rnr protein networkhttps://string-db.org/network/596315.HMPREF0634_1041Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
secG protein networkhttps://string-db.org/network/596315.HMPREF0634_1042Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
eno protein networkhttps://string-db.org/network/596315.HMPREF0634_1043Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...]
gpmI protein networkhttps://string-db.org/network/596315.HMPREF0634_10442,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
tpiA protein networkhttps://string-db.org/network/596315.HMPREF0634_1045Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to th [...]
pgk protein networkhttps://string-db.org/network/596315.HMPREF0634_1046Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
gap protein networkhttps://string-db.org/network/596315.HMPREF0634_1047Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...]
EFM63974.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1048Putative sugar-binding domain protein; Identified by match to protein family HMM PF04198.
EFM63982.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1049Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to pr [...]
EFM63989.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1050Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
EFM64003.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1051MATE efflux family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01554; match to protein family HMM [...]
EFM64156.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1052Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
EFM64157.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1053Hypothetical protein.
EFM64151.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1054ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64153.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1055ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64152.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1056Putative septum site-determining protein MinC; Identified by match to protein family HMM PF00005.
EFM64154.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1057Cobalt transport protein; Identified by match to protein family HMM PF02361.
EFM64158.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1058Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
EFM64155.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1059Transcriptional regulator, TetR family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00440.
EFM65136.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1060Identified by match to protein family HMM PF03883; Belongs to the UPF0246 family.
tpx protein networkhttps://string-db.org/network/596315.HMPREF0634_1061Redoxin family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection [...]
EFM65142.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1062Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
EFM65137.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1063Hypothetical protein.
EFM65132.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1064Hydrolase, alpha/beta domain protein; Identified by match to protein family HMM PF00561.
fbpA protein networkhttps://string-db.org/network/596315.HMPREF0634_1065Identified by match to protein family HMM PF05670; match to protein family HMM PF05833.
pyrR protein networkhttps://string-db.org/network/596315.HMPREF0634_1066Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyl [...]
EFM65131.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1067Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
lspA protein networkhttps://string-db.org/network/596315.HMPREF0634_1068Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
EFM65130.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1069Hypothetical protein.
trpS protein networkhttps://string-db.org/network/596315.HMPREF0634_1070tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
mtnN protein networkhttps://string-db.org/network/596315.HMPREF0634_1071MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thio [...]
EFM65133.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1072Identified by match to protein family HMM PF03601.
EFM65129.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1073comEA protein; Identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426.
EFM65128.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1074Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family.
EFM65134.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1075Superoxide reductase; Identified by match to protein family HMM PF01880; match to protein family HMM PF06397; match to protein family HMM TIGR00319; match to protein family HMM TIGR00320; match t [...]
EFM65145.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1076Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
EFM65135.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1077Rubrerythrin; Identified by match to protein family HMM PF02915.
EFM65139.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1078Hypothetical protein.
EFM65146.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1079Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64719.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1080Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01832 [...]
EFM64718.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1081Sporulation and cell division repeat protein; Identified by match to protein family HMM PF05036.
galE protein networkhttps://string-db.org/network/596315.HMPREF0634_1082UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belong [...]
asnA protein networkhttps://string-db.org/network/596315.HMPREF0634_1083Aspartate--ammonia ligase; Identified by match to protein family HMM PF03590; match to protein family HMM TIGR00669.
hpt protein networkhttps://string-db.org/network/596315.HMPREF0634_1084Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family [...]
EFM64734.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1085Cof-like hydrolase; Identified by match to protein family HMM PF08282.
EFM64755.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1086Identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF034 [...]
EFM64763.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1087Hypothetical protein.
EFM64778.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1088Stage II sporulation protein E; Identified by match to protein family HMM PF07228.
nifJ protein networkhttps://string-db.org/network/596315.HMPREF0634_1089Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
EFM64725.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1090PRD domain protein; Identified by match to protein family HMM PF00874; match to protein family HMM PF03123.
EFM64790.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1091PTS system, glucose-like IIB component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TI [...]
aroA protein networkhttps://string-db.org/network/596315.HMPREF0634_10923-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
aroC protein networkhttps://string-db.org/network/596315.HMPREF0634_1093Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
EFM64769.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1094Chorismate mutase; Identified by match to protein family HMM PF01817.
aroK protein networkhttps://string-db.org/network/596315.HMPREF0634_1095Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
asnB protein networkhttps://string-db.org/network/596315.HMPREF0634_1096Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536.
EFM64783.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1097Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.
asnS protein networkhttps://string-db.org/network/596315.HMPREF0634_1098asparagine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457.
EFM64760.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1099AMP-binding enzyme; Identified by match to protein family HMM PF00501; Belongs to the ATP-dependent AMP-binding enzyme family.
ddl protein networkhttps://string-db.org/network/596315.HMPREF0634_1100D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
cinA protein networkhttps://string-db.org/network/596315.HMPREF0634_1101Competence/damage-inducible domain protein CinA; Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein fa [...]
EFM64726.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1102Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
EFM64745.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1103Hypothetical protein.
EFM64785.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1104Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212.
EFM64753.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1105Hypothetical protein.
EFM64723.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1106SNARE-like domain protein; Identified by match to protein family HMM PF09335.
rnhA protein networkhttps://string-db.org/network/596315.HMPREF0634_1107Ribonuclease HI; Identified by match to protein family HMM PF00075.
EFM64789.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1108DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF00717; match to protein family HMM PF01381.
vanW protein networkhttps://string-db.org/network/596315.HMPREF0634_1109Identified by match to protein family HMM PF04294.
gltX protein networkhttps://string-db.org/network/596315.HMPREF0634_1110glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of [...]
purF protein networkhttps://string-db.org/network/596315.HMPREF0634_1111Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
EFM64775.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1112DNA topoisomerase; Identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751.
EFM64721.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1113Identified by match to protein family HMM PF01171; Belongs to the TtcA family.
EFM64729.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1114Exonuclease, DNA polymerase III, epsilon subunit family; Identified by match to protein family HMM PF00929; match to protein family HMM PF01612; match to protein family HMM TIGR00573.
EFM64749.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1115Transglycosylase; Identified by match to protein family HMM PF00912.
EFM64771.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1116Identified by match to protein family HMM PF00581.
EFM64743.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1117ferredoxin--NADP+ reductase, subunit alpha; Identified by match to protein family HMM PF00175; match to protein family HMM PF00970.
gltA protein networkhttps://string-db.org/network/596315.HMPREF0634_1118Glutamate synthase (NADPH), homotetrameric; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01316.
EFM64788.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1119Pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA [...]
EFM64722.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1120SIS domain protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418.
EFM64714.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1121Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
EFM64754.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1122Identified by match to protein family HMM PF00890; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275.
cmk protein networkhttps://string-db.org/network/596315.HMPREF0634_1123Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.
EFM64776.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1124Acyltransferase; Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530.
ispH protein networkhttps://string-db.org/network/596315.HMPREF0634_11254-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
hflB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1126ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
lexA protein networkhttps://string-db.org/network/596315.HMPREF0634_1127Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causin [...]
EFM64748.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1128Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
EFM64738.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1129Beta-eliminating lyase; Identified by match to protein family HMM PF01212.
EFM64741.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1130Citrate (Si)-synthase; Identified by match to protein family HMM PF00285; Belongs to the citrate synthase family.
EFM64766.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1131EDD domain protein, DegV family; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.
EFM64736.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1132Hypothetical protein.
trmB protein networkhttps://string-db.org/network/596315.HMPREF0634_1133tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
EFM64740.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1134Hypothetical protein.
nrdG protein networkhttps://string-db.org/network/596315.HMPREF0634_1135Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radic [...]
nrdD protein networkhttps://string-db.org/network/596315.HMPREF0634_1136Anaerobic ribonucleoside-triphosphate reductase; Identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487.
EFM64732.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1138Aluminum resistance protein; Identified by match to protein family HMM PF01053; match to protein family HMM PF06838.
miaA protein networkhttps://string-db.org/network/596315.HMPREF0634_1139tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(di [...]
mutL protein networkhttps://string-db.org/network/596315.HMPREF0634_1140DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matc [...]
mutS protein networkhttps://string-db.org/network/596315.HMPREF0634_1141DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
EFM64762.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1142ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64747.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1143Identified by match to protein family HMM PF09084.
EFM64730.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1144ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM64777.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1145Identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106.
EFM64757.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1146Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
EFM64733.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1147ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64731.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1148Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64756.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1149Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF02796.
EFM64739.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1150ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64727.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1151Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.
EFM64779.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1152Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64770.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1153Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match [...]
typA protein networkhttps://string-db.org/network/596315.HMPREF0634_1154GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394.
EFM64720.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1155Hypothetical protein.
EFM64765.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1156Identified by match to protein family HMM PF01544.
EFM64713.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1157Sel1 repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00515; match to protein family HMM PF0771 [...]
EFM65094.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1158ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65103.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1159Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
EFM65106.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1160Hypothetical protein.
EFM65098.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1161Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
EFM65087.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1162ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
EFM65092.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1163Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene [...]
EFM65089.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1164THUMP domain protein; Identified by match to protein family HMM PF01170; match to protein family HMM PF02926; Belongs to the methyltransferase superfamily.
telA protein networkhttps://string-db.org/network/596315.HMPREF0634_1165Toxic anion resistance protein TelA; Identified by match to protein family HMM PF05816; Belongs to the TelA family.
EFM65099.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1166ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65086.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1167ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
EFM65107.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1168ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
EFM65105.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1169Hypothetical protein.
EFM65084.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1170Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
gap-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1171Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...]
EFM65104.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1172Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM65097.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1173Exonuclease; Identified by match to protein family HMM PF00929.
yihY protein networkhttps://string-db.org/network/596315.HMPREF0634_1174Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; Belongs to the UPF0761 family.
EFM65101.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1175Putative membrane protein; Identified by match to protein family HMM PF00892.
polC protein networkhttps://string-db.org/network/596315.HMPREF0634_1176DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
EFM65088.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1177Hypothetical protein.
cwpV protein networkhttps://string-db.org/network/596315.HMPREF0634_1178Cell wall protein V; Identified by match to protein family HMM PF03734; match to protein family HMM PF04122.
thyA protein networkhttps://string-db.org/network/596315.HMPREF0634_1179Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
folA protein networkhttps://string-db.org/network/596315.HMPREF0634_1180Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
EFM65100.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1181Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04122.
EFM63954.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1182Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.
EFM63963.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1183Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
EFM63962.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1184Antioxidant, AhpC/TSA family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell prot [...]
rpoC protein networkhttps://string-db.org/network/596315.HMPREF0634_1185DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/596315.HMPREF0634_1186DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
EFM63943.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1187Transporter, auxin efflux carrier (AEC) family protein; Identified by match to protein family HMM PF03547.
cydC protein networkhttps://string-db.org/network/596315.HMPREF0634_1188Thiol reductant ABC exporter, CydC subunit; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868.
EFM63956.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1189ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM63964.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1190Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM63951.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1191Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473.
proS protein networkhttps://string-db.org/network/596315.HMPREF0634_1193proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA( [...]
EFM63959.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1194PIN domain protein; Identified by match to protein family HMM PF01850; match to protein family HMM PF01938.
disA protein networkhttps://string-db.org/network/596315.HMPREF0634_1195Hypothetical protein; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA i [...]
radA protein networkhttps://string-db.org/network/596315.HMPREF0634_1196DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
pspC protein networkhttps://string-db.org/network/596315.HMPREF0634_1197PspC domain protein; Identified by match to protein family HMM PF04024.
EFM63957.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1198Fic family protein; Identified by match to protein family HMM PF02661.
EFM63949.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1199Identified by match to protein family HMM PF02492.
EFM63936.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1200Putative translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM [...]
EFM63968.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1201Transcriptional regulator, BlaI/MecI/CopY family; Identified by match to protein family HMM PF03965.
EFM63940.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1202DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
rplI protein networkhttps://string-db.org/network/596315.HMPREF0634_1203Ribosomal protein L9; Binds to the 23S rRNA.
dnaB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1204Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
EFM63939.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1205DNA replication protein DnaC.
EFM63938.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1206DnaD domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446.
EFM63965.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1207Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM63952.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1208Rubredoxin; Identified by match to protein family HMM PF00301.
EFM63944.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1209Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
EFM63967.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1210ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
EFM63969.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1211ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM63960.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1212ABC 3 transport family protein; Identified by match to protein family HMM PF00950.
EFM63946.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1213DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
rpsR protein networkhttps://string-db.org/network/596315.HMPREF0634_1214Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal p [...]
EFM63937.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1215Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
rpsF protein networkhttps://string-db.org/network/596315.HMPREF0634_1216Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
EFM65279.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1217Cna protein B-type domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05738.
EFM65284.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1218Hypothetical protein.
rbfA protein networkhttps://string-db.org/network/596315.HMPREF0634_1219Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
infB protein networkhttps://string-db.org/network/596315.HMPREF0634_1220Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
EFM65281.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1221Ribosomal protein L7Ae; Identified by match to protein family HMM PF01248.
EFM65268.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1222Identified by match to protein family HMM PF04296.
nusA protein networkhttps://string-db.org/network/596315.HMPREF0634_1223Transcription termination factor NusA; Participates in both transcription termination and antitermination.
rimP protein networkhttps://string-db.org/network/596315.HMPREF0634_1224Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
EFM65278.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1225Hypothetical protein.
cdsA protein networkhttps://string-db.org/network/596315.HMPREF0634_1226Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family.
uppS protein networkhttps://string-db.org/network/596315.HMPREF0634_1227Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
frr protein networkhttps://string-db.org/network/596315.HMPREF0634_1228Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/596315.HMPREF0634_1229UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
tsf protein networkhttps://string-db.org/network/596315.HMPREF0634_1230Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
rpsB protein networkhttps://string-db.org/network/596315.HMPREF0634_1231Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.
bdhA protein networkhttps://string-db.org/network/596315.HMPREF0634_1232Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465.
licC protein networkhttps://string-db.org/network/596315.HMPREF0634_1233LicC protein.
EFM65270.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1234Putative membrane protein; Identified by match to protein family HMM PF00892.
EFM65277.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1235Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047; match to protein family HMM PF01633; match to protein family HMM PF01636.
EFM64922.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1236Serine-type D-Ala-D-Ala carboxypeptidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00768; Belongs to th [...]
EFM64916.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1237Hypothetical protein.
hflX protein networkhttps://string-db.org/network/596315.HMPREF0634_1238GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPa [...]
agcS-3 protein networkhttps://string-db.org/network/596315.HMPREF0634_1239Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835.
EFM64890.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1240Cysteine-rich small domain protein; Identified by match to protein family HMM PF04071.
EFM64887.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1241Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycer [...]
pvuIIC protein networkhttps://string-db.org/network/596315.HMPREF0634_1242Transcriptional regulator, PvuIIC; Identified by match to protein family HMM PF01381.
EFM64928.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1243Hypothetical protein.
EFM64914.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1244Hypothetical protein.
EFM64970.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1245Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM64955.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1246Macro domain protein; Identified by match to protein family HMM PF01661.
EFM64963.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1247Putative cell wall binding repeat 2; Identified by match to protein family HMM PF04122.
EFM64934.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1248Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.
EFM64958.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1249Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64937.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_12504Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
EFM64950.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1251Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64935.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1252ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64972.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1253Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64909.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1254Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64908.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1255HAMP domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
acpS protein networkhttps://string-db.org/network/596315.HMPREF0634_1256Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
EFM64936.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1257Transketolase, thiamine diphosphate binding domain protein; Identified by match to protein family HMM PF00456.
EFM64898.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1258Transketolase, pyridine binding domain protein; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780.
EFM64899.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1259Peptidase, S41 family; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
cobT protein networkhttps://string-db.org/network/596315.HMPREF0634_1260Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole [...]
EFM64962.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1261Putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Identified by match to protein family HMM PF02283.
cobS protein networkhttps://string-db.org/network/596315.HMPREF0634_1262adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from ade [...]
EFM64938.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1263Identified by match to protein family HMM PF00300.
cobQ protein networkhttps://string-db.org/network/596315.HMPREF0634_1264Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed fo [...]
cobB protein networkhttps://string-db.org/network/596315.HMPREF0634_1265Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen so [...]
cobD protein networkhttps://string-db.org/network/596315.HMPREF0634_1266Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
EFM64956.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1267Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
EFM64957.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1268GHMP kinase, N-terminal domain protein; Identified by match to protein family HMM PF00288.
cbiC protein networkhttps://string-db.org/network/596315.HMPREF0634_1269cobalt-precorrin-8X methylmutase; Identified by match to protein family HMM PF02570.
cbiD protein networkhttps://string-db.org/network/596315.HMPREF0634_1270Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
cbiE protein networkhttps://string-db.org/network/596315.HMPREF0634_1271Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467.
cbiT protein networkhttps://string-db.org/network/596315.HMPREF0634_1272precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; Identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM TIGR02469 [...]
cobM protein networkhttps://string-db.org/network/596315.HMPREF0634_1273Precorrin-4 C(11)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465.
cbiG protein networkhttps://string-db.org/network/596315.HMPREF0634_1274CbiG; Identified by match to protein family HMM PF01890.
cobJ protein networkhttps://string-db.org/network/596315.HMPREF0634_1275precorrin-3B C(17)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466.
cobK protein networkhttps://string-db.org/network/596315.HMPREF0634_1276precorrin-6A reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
cobI protein networkhttps://string-db.org/network/596315.HMPREF0634_1277Precorrin-2 C(20)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF06180; match to protein family HMM TIGR01467.
EFM64885.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1278Phospholipase, patatin family; Identified by match to protein family HMM PF01734.
fba protein networkhttps://string-db.org/network/596315.HMPREF0634_1279Fructose-1,6-bisphosphate aldolase, class II; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859.
raiA protein networkhttps://string-db.org/network/596315.HMPREF0634_1280Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present d [...]
EFM64931.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1281Identified by match to protein family HMM PF02562.
ybeY protein networkhttps://string-db.org/network/596315.HMPREF0634_1282Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
EFM64944.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1283Identified by match to protein family HMM PF01219; match to protein family HMM PF01569.
era protein networkhttps://string-db.org/network/596315.HMPREF0634_1284Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possi [...]
mgtE protein networkhttps://string-db.org/network/596315.HMPREF0634_1285Magnesium transporter; Acts as a magnesium transporter.
recO protein networkhttps://string-db.org/network/596315.HMPREF0634_1286DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
EFM64921.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1287Hypothetical protein.
glyQ protein networkhttps://string-db.org/network/596315.HMPREF0634_1288glycine--tRNA ligase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388.
glyS protein networkhttps://string-db.org/network/596315.HMPREF0634_1289glycine--tRNA ligase, beta subunit; Identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.
EFM64965.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1290Hypothetical protein.
EFM64903.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1291Flavodoxin; Identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753.
EFM64930.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1292Hydrolase, alpha/beta domain protein; Identified by match to protein family HMM PF00561.
EFM64953.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1293Oligopeptide transporter, OPT family; Identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733.
EFM64932.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1294N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
EFM64975.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1295Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.
pfkB protein networkhttps://string-db.org/network/596315.HMPREF0634_12961-phosphofructokinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; match to protein family HMM TIGR03828; Belongs to the carbohydrate kinase PfkB fam [...]
EFM64939.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1297Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; [...]
EFM64929.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1298Putative iron-only hydrogenase system regulator; Identified by match to protein family HMM TIGR03959.
hydE protein networkhttps://string-db.org/network/596315.HMPREF0634_1299Iron-only hydrogenase maturation rSAM protein HydE; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03956.
hydG protein networkhttps://string-db.org/network/596315.HMPREF0634_1300Iron-only hydrogenase maturation rSAM protein HydG; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR03955.
hydF protein networkhttps://string-db.org/network/596315.HMPREF0634_1301Hydrogenase maturation GTPase HydF; Identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03918.
EFM64889.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1302Identified by match to protein family HMM PF06496.
EFM64923.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1303RNA polymerase sigma factor, sigma-70 family; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-7 [...]
EFM64910.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1304Putative acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation o [...]
accC protein networkhttps://string-db.org/network/596315.HMPREF0634_1305acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier [...]
accD protein networkhttps://string-db.org/network/596315.HMPREF0634_1306acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carr [...]
accA protein networkhttps://string-db.org/network/596315.HMPREF0634_1307Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Identified by match to protein family HMM PF03255.
EFM64895.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1308Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
EFM64949.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_13093-oxoacyl-(acyl carrier protein) synthase III; Identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; Belongs to the thiola [...]
acpP-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1310Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
EFM64959.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1311Putative enoyl-[acyl-carrier-protein] reductase II; Identified by match to protein family HMM PF03060; match to protein family HMM TIGR03151.
EFM64907.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1312Putative [acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698.
fabG protein networkhttps://string-db.org/network/596315.HMPREF0634_13133-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
fabF protein networkhttps://string-db.org/network/596315.HMPREF0634_1314Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
fabZ protein networkhttps://string-db.org/network/596315.HMPREF0634_1315Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...]
pbuX protein networkhttps://string-db.org/network/596315.HMPREF0634_1316Xanthine permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173.
xpt protein networkhttps://string-db.org/network/596315.HMPREF0634_1317Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
EFM64942.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1318Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.
EFM64969.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1319Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
EFM64945.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1320Identified by match to protein family HMM PF03780.
EFM64933.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_13218-oxoguanine DNA-glycosylase (ogg); Identified by match to protein family HMM PF00730; match to protein family HMM PF07934.
EFM64946.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1322Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycer [...]
groS protein networkhttps://string-db.org/network/596315.HMPREF0634_1323Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groL protein networkhttps://string-db.org/network/596315.HMPREF0634_1324Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
guaA protein networkhttps://string-db.org/network/596315.HMPREF0634_1325GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
EFM64892.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1326Uracil DNA glycosylase family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64501.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1327ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64177.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1329Efflux ABC transporter, permease protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64216.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1330Putative ATP synthase F0, A subunit; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00512; match to protein f [...]
EFM64227.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1331Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM64206.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1332Thiamine diphosphokinase; Identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378.
rpe protein networkhttps://string-db.org/network/596315.HMPREF0634_1333Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
rsgA protein networkhttps://string-db.org/network/596315.HMPREF0634_1334Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature sub [...]
EFM64219.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1335Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
EFM64215.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1336Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.
EFM64211.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1337Protein phosphatase 2C; Identified by match to protein family HMM PF00481.
rlmN protein networkhttps://string-db.org/network/596315.HMPREF0634_133823S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
sun protein networkhttps://string-db.org/network/596315.HMPREF0634_1339Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
EFM64221.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1340Putative neutral zinc metallopeptidase; Identified by match to protein family HMM PF04298.
fmt protein networkhttps://string-db.org/network/596315.HMPREF0634_1341methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
def protein networkhttps://string-db.org/network/596315.HMPREF0634_1342Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
priA protein networkhttps://string-db.org/network/596315.HMPREF0634_1343Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
coaBC protein networkhttps://string-db.org/network/596315.HMPREF0634_1344Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantot [...]
rpoZ protein networkhttps://string-db.org/network/596315.HMPREF0634_1345DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and al [...]
gmk protein networkhttps://string-db.org/network/596315.HMPREF0634_1346Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
EFM64209.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1347Identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255.
EFM64200.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1348Identified by match to protein family HMM PF08240.
EFM64196.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1349ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64222.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1350ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.
EFM64214.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1351Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
pgi protein networkhttps://string-db.org/network/596315.HMPREF0634_1352Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family.
EFM64204.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1353FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
EFM64228.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1354Hypothetical protein.
EFM64224.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1355Identified by match to protein family HMM PF02810.
EFM64180.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1356Hypothetical protein.
EFM64191.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1357Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
EFM64203.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1358Bacterial type II secretion system domain protein F; Identified by match to protein family HMM PF00482.
EFM64208.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1359Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.
EFM64178.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1360Transporter, CPA2 family; Identified by match to protein family HMM PF00999.
EFM64181.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1361Identified by match to protein family HMM PF00881.
EFM64189.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1362Hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
EFM64184.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1363Identified by match to protein family HMM PF00149.
EFM64223.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1364RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.
EFM64201.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1365Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
EFM64190.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1366Hypothetical protein.
EFM64205.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1367Identified by match to protein family HMM PF08348.
EFM64179.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1368Hypothetical protein.
EFM64193.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1369HAD hydrolase, family IB; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490.
EFM64212.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1370Hypothetical protein.
EFM64198.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1371Hypothetical protein.
EFM64188.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1372SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
sufS protein networkhttps://string-db.org/network/596315.HMPREF0634_1373Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
EFM64220.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1374SufB/sufD domain protein; Identified by match to protein family HMM PF01458.
sufB protein networkhttps://string-db.org/network/596315.HMPREF0634_1375FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
sufC protein networkhttps://string-db.org/network/596315.HMPREF0634_1376FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
EFM64218.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1377Hypothetical protein; Identified by glimmer; putative.
EFM64182.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1378ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM64225.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1379ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM64197.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1380Efflux ABC transporter, permease protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02687.
EFM65265.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1382Efflux ABC transporter, permease protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65007.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_13832-hydroxyglutaryl-CoA dehydratase, D-component; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65010.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1384acyl-CoA dehydrogenase, C-terminal domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein fa [...]
etfB-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1385Electron transfer flavoprotein domain protein; Identified by match to protein family HMM PF01012.
etfA-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1386Electron transfer flavoprotein FAD-binding domain protein; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
pdxB-3 protein networkhttps://string-db.org/network/596315.HMPREF0634_13874-phosphoerythronate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
prfB protein networkhttps://string-db.org/network/596315.HMPREF0634_1388Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
EFM65015.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1389Tex-like protein N-terminal domain protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371.
EFM65029.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1390Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporte [...]
fldI protein networkhttps://string-db.org/network/596315.HMPREF0634_1391R-phenyllactate dehydratase activator; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
EFM64998.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1392Phosphate butyryltransferase; Identified by match to protein family HMM PF01515.
EFM65025.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1393Hydrolase, P-loop family; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150.
yeaZ protein networkhttps://string-db.org/network/596315.HMPREF0634_1394Universal bacterial protein YeaZ; Identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725.
rimI protein networkhttps://string-db.org/network/596315.HMPREF0634_1395Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
tsaD protein networkhttps://string-db.org/network/596315.HMPREF0634_1396Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the tran [...]
EFM64999.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1397ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
rex protein networkhttps://string-db.org/network/596315.HMPREF0634_1398CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
EFM65022.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1399Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
gluD protein networkhttps://string-db.org/network/596315.HMPREF0634_1400Glutamate dehydrogenase, NAD-specific; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
EFM64986.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1401FeoA domain protein; Identified by match to protein family HMM PF04023.
EFM65019.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1402FeoA domain protein; Identified by match to protein family HMM PF04023.
feoB protein networkhttps://string-db.org/network/596315.HMPREF0634_1403Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) [...]
EFM65011.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1404Hypothetical protein.
EFM64988.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1405Identified by match to protein family HMM PF03703.
EFM65008.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1406Identified by match to protein family HMM PF03458.
EFM64993.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1407Transporter, auxin efflux carrier (AEC) family protein; Identified by match to protein family HMM PF03547.
EFM65023.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1408Identified by match to protein family HMM PF01797.
EFM64990.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1409Transposase, Mutator family; Required for the transposition of the insertion element.
EFM65026.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1410Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473.
EFM64985.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1411Hypothetical protein.
EFM65027.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1412Cell wall-binding repeat protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...]
EFM65006.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1414Aminotransferase, class V; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
thiI protein networkhttps://string-db.org/network/596315.HMPREF0634_1415Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photos [...]
EFM65002.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1416Phospholipase, patatin family; Identified by match to protein family HMM PF01734.
EFM65021.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1417Identified by match to protein family HMM PF04122.
EFM64997.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1418DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family.
EFM65020.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1419Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
EFM65012.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1420ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65018.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_14214Fe-4S binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02906.
valS protein networkhttps://string-db.org/network/596315.HMPREF0634_1422valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, [...]
purC protein networkhttps://string-db.org/network/596315.HMPREF0634_1423Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Identified by match to protein family HMM PF01259; Belongs to the SAICAR synthetase family.
pepD protein networkhttps://string-db.org/network/596315.HMPREF0634_1424Xaa-His dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893.
folC protein networkhttps://string-db.org/network/596315.HMPREF0634_1425Bifunctional protein FolC; Identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499.
EFM65003.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1426TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739.
hcp protein networkhttps://string-db.org/network/596315.HMPREF0634_1427Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
EFM65110.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1429Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65109.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1430Putative membrane protein; Identified by match to protein family HMM PF00892.
EFM65112.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1431Hypothetical protein.
EFM65113.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1433ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65114.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1434Identified by match to protein family HMM PF03781.
EFM65111.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1435Hypothetical protein.
EFM64687.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1436Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64878.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1437ABC transporter, ATP-binding protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00005.
EFM64883.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1438Na+/H+ antiporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...]
EFM64875.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1440Identified by match to protein family HMM PF03553.
EFM64874.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1441Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
EFM64881.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1442ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
dnaX protein networkhttps://string-db.org/network/596315.HMPREF0634_1443DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' t [...]
EFM64876.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1444DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
recR protein networkhttps://string-db.org/network/596315.HMPREF0634_1445Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
EFM64873.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1446Hypothetical protein; Identified by glimmer; putative.
EFM64879.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1447Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925.
EFM65123.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1449ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65125.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1450ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
EFM65118.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1451ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...]
EFM65117.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1452ABC transporter, ATP-binding family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gen [...]
EFM65115.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1453Hypothetical protein.
EFM65126.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1454Identified by match to protein family HMM PF00903.
EFM65121.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1455Hypothetical protein.
EFM65120.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1457Hypothetical protein.
EFM65122.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1458Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65119.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1459Hypothetical protein.
EFM65116.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1460Leucine Rich Repeat protein; Identified by match to protein family HMM PF00560; match to protein family HMM PF04122.
EFM65148.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1461Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65147.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1462Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65150.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1463Hypothetical protein.
EFM65151.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1464Identified by match to protein family HMM PF08937.
EFM65149.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1465Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
trmU protein networkhttps://string-db.org/network/596315.HMPREF0634_1466tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
EFM64980.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1467Transcriptional regulator, Rrf2 family; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
EFM64977.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1468Recombination factor protein RarA; Identified by match to protein family HMM PF00004.
codY protein networkhttps://string-db.org/network/596315.HMPREF0634_1469GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth [...]
topA protein networkhttps://string-db.org/network/596315.HMPREF0634_1470DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
dprA protein networkhttps://string-db.org/network/596315.HMPREF0634_1471DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
EFM64978.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1472Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.
EFM64976.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1473Putative TIGR00252 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02021; Belongs to the UPF01 [...]
EFM64871.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1474Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
EFM64867.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1475Identified by match to protein family HMM PF09529; match to protein family HMM TIGR02206.
lysS protein networkhttps://string-db.org/network/596315.HMPREF0634_1476lysine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF01588; match to protein family HMM TIGR00499; Belongs to [...]
greA protein networkhttps://string-db.org/network/596315.HMPREF0634_1477Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
EFM64868.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1478Efflux ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...]
EFM64869.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1479Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.
EFM65322.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1480Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM64984.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1482Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.
EFM65260.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1483Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65259.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1484Hypothetical protein.
bcrA protein networkhttps://string-db.org/network/596315.HMPREF0634_1485Bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005.
EFM65262.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1486ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
EFM65258.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1487Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
EFM65264.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1488Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM65257.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1489Transposase; Identified by match to protein family HMM PF01548; match to protein family HMM PF02371.
EFM64791.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1491Putative cell wall binding repeat 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
EFM65152.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1492Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
clpX protein networkhttps://string-db.org/network/596315.HMPREF0634_1494ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/596315.HMPREF0634_1495ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in [...]
tig protein networkhttps://string-db.org/network/596315.HMPREF0634_1496Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
EFM64623.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1497Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040.
rph protein networkhttps://string-db.org/network/596315.HMPREF0634_1498tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can a [...]
ligA protein networkhttps://string-db.org/network/596315.HMPREF0634_1499DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energ [...]
EFM64622.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1500Antioxidant, AhpC/TSA family; Identified by match to protein family HMM PF00578; match to protein family HMM PF08534.
EFM64626.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1501ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM64630.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1502ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.
proV protein networkhttps://string-db.org/network/596315.HMPREF0634_1503Glycine betaine/L-proline transport ATP binding subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
EFM64589.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1504Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
EFM64570.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1505Hypothetical protein.
nadE protein networkhttps://string-db.org/network/596315.HMPREF0634_1506NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
EFM64643.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1507Identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257.
EFM64647.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1508Hypothetical protein.
EFM64629.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1509Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
EFM64569.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1510Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...]
EFM64609.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1511Putative CoA-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992.
EFM64636.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1512Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022.
hpt-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1513Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family [...]
ysxC protein networkhttps://string-db.org/network/596315.HMPREF0634_1514Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase sup [...]
lon protein networkhttps://string-db.org/network/596315.HMPREF0634_1515Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular [...]
EFM64640.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1516Hypothetical protein.
cstA protein networkhttps://string-db.org/network/596315.HMPREF0634_1517Carbon starvation protein CstA; Identified by match to protein family HMM PF02554.
argS protein networkhttps://string-db.org/network/596315.HMPREF0634_1518arginine--tRNA ligase; Identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456.
EFM64587.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1519Identified by match to protein family HMM PF04463.
mutS2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1520MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the [...]
pepD-2 protein networkhttps://string-db.org/network/596315.HMPREF0634_1521Xaa-His dipeptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893.
EFM64595.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1522EDD domain protein, DegV family; Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762.
EFM64585.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1523RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA m [...]
nth protein networkhttps://string-db.org/network/596315.HMPREF0634_1524Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...]
EFM64582.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1525Identified by match to protein family HMM PF00485.
lepB protein networkhttps://string-db.org/network/596315.HMPREF0634_1526Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
EFM64618.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1527Identified by match to protein family HMM PF01189.
EFM64624.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1528Hypothetical protein.
pdp protein networkhttps://string-db.org/network/596315.HMPREF0634_1529Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR0 [...]
EFM64603.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1530Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.
purD protein networkhttps://string-db.org/network/596315.HMPREF0634_1531Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF028 [...]
purH protein networkhttps://string-db.org/network/596315.HMPREF0634_1532Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM T [...]
purN protein networkhttps://string-db.org/network/596315.HMPREF0634_1533Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
purM protein networkhttps://string-db.org/network/596315.HMPREF0634_1534Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.
purE protein networkhttps://string-db.org/network/596315.HMPREF0634_1535Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
EFM64610.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1536Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM64631.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1537Hypothetical protein.
EFM64572.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1538ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
glpK protein networkhttps://string-db.org/network/596315.HMPREF0634_1539Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
pepF protein networkhttps://string-db.org/network/596315.HMPREF0634_1540Identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR00181.
EFM64642.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1541Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.
EFM64645.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1542Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.
EFM64637.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1543Peptidase C1-like family; Identified by match to protein family HMM PF03051; Belongs to the peptidase C1 family.
EFM64619.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1544Identified by match to protein family HMM PF09664.
EFM64620.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1545Repeat protein; Identified by match to protein family HMM PF04122.
EFM64581.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1546Dehydrogenase, FMN-dependent; Identified by match to protein family HMM PF01070.
EFM64604.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1547Transporter, auxin efflux carrier (AEC) family protein; Identified by match to protein family HMM PF03547.
EFM64566.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1548ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; Identified by match to protein family HMM PF02823.
atpD protein networkhttps://string-db.org/network/596315.HMPREF0634_1549ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
atpG protein networkhttps://string-db.org/network/596315.HMPREF0634_1550ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...]
atpA protein networkhttps://string-db.org/network/596315.HMPREF0634_1551ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
atpH protein networkhttps://string-db.org/network/596315.HMPREF0634_1552ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...]
atpF protein networkhttps://string-db.org/network/596315.HMPREF0634_1553ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
atpE protein networkhttps://string-db.org/network/596315.HMPREF0634_1554ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpB protein networkhttps://string-db.org/network/596315.HMPREF0634_1555ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
EFM64632.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1556Hypothetical protein.
upp protein networkhttps://string-db.org/network/596315.HMPREF0634_1557Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
rpiB protein networkhttps://string-db.org/network/596315.HMPREF0634_1558Ribose-5-phosphate isomerase B; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120.
EFM64578.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1559Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
prfA protein networkhttps://string-db.org/network/596315.HMPREF0634_1560Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
prmC protein networkhttps://string-db.org/network/596315.HMPREF0634_1561protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally [...]
EFM64596.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1562Putative azaleucine resistance protein AzlC; Identified by match to protein family HMM PF03591.
azlD protein networkhttps://string-db.org/network/596315.HMPREF0634_1563Branched-chain amino acid transport protein (AzlD); Identified by match to protein family HMM PF05437.
rpmE protein networkhttps://string-db.org/network/596315.HMPREF0634_1564Ribosomal protein L31; Binds the 23S rRNA.
rho protein networkhttps://string-db.org/network/596315.HMPREF0634_1565Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
galU protein networkhttps://string-db.org/network/596315.HMPREF0634_1566UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.
EFM64597.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1567S4 domain protein; Identified by match to protein family HMM PF01479.
hup protein networkhttps://string-db.org/network/596315.HMPREF0634_1568DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.
EFM64600.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1569Tetrapyrrole methylase; Identified by match to protein family HMM PF00590.
EFM64639.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1570Putative stage V sporulation protein B; Identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023.
EFM64651.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1571PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639.
mfd protein networkhttps://string-db.org/network/596315.HMPREF0634_1572Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
pth protein networkhttps://string-db.org/network/596315.HMPREF0634_1573aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
EFM64648.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1574Peptidase, A24 family.
EFM64608.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1575Twitching motility protein; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.
prs protein networkhttps://string-db.org/network/596315.HMPREF0634_1576Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydr [...]
glmU protein networkhttps://string-db.org/network/596315.HMPREF0634_1577UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (U [...]
EFM64606.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1578Hypothetical protein.
purR protein networkhttps://string-db.org/network/596315.HMPREF0634_1579Pur operon repressor PurR; Identified by match to protein family HMM PF00156; match to protein family HMM PF09182; match to protein family HMM TIGR01743.
murC protein networkhttps://string-db.org/network/596315.HMPREF0634_1580UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
EFM65040.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1582UvrD/REP helicase; Identified by match to protein family HMM PF00580.
EFM65051.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1583Hypothetical protein.
EFM65047.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1584Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
addA protein networkhttps://string-db.org/network/596315.HMPREF0634_1585ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
sbcD protein networkhttps://string-db.org/network/596315.HMPREF0634_1586Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as [...]
EFM65045.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1587Exonuclease SbcCD, C subunit; Identified by match to protein family HMM PF02463.
EFM65037.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1588Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
EFM65033.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1589Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
EFM65052.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1590Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
EFM65046.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1591Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
EFM65044.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1592ROK family protein; Identified by match to protein family HMM PF00480.
EFM65030.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1593Transcriptional regulator, LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
EFM65042.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1594ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
EFM65035.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1595ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM65039.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1596ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
EFM65036.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1597Glycosyl hydrolase family 65 central catalytic domain protein; Identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636.
EFM65034.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1598Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128.
pgmB protein networkhttps://string-db.org/network/596315.HMPREF0634_1599Beta-phosphoglucomutase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01990; match to protein family HMM TIGR02009.
EFM65050.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1600ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
EFM65049.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1601Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
EFM65038.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1602ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
EFM65048.1 protein networkhttps://string-db.org/network/596315.HMPREF0634_1603Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.