Organism Overview: Alistipes finegoldii


 
dnaA protein networkhttps://string-db.org/network/679935.Alfi_0001Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
Alfi_0002 protein networkhttps://string-db.org/network/679935.Alfi_0002Hypothetical protein.
Alfi_0003 protein networkhttps://string-db.org/network/679935.Alfi_0003Putative transcriptional regulator; PFAM: HTH domain.
Alfi_0004 protein networkhttps://string-db.org/network/679935.Alfi_0004Mannose-6-phosphate isomerase; PFAM: Cupin domain.
Alfi_0005 protein networkhttps://string-db.org/network/679935.Alfi_0005Hypothetical protein.
Alfi_0006 protein networkhttps://string-db.org/network/679935.Alfi_0006Peroxiredoxin; PFAM: AhpC/TSA family.
Alfi_0007 protein networkhttps://string-db.org/network/679935.Alfi_0007Hypothetical protein.
recA protein networkhttps://string-db.org/network/679935.Alfi_0008Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
Alfi_0009 protein networkhttps://string-db.org/network/679935.Alfi_0009(p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in [...]
Alfi_0010 protein networkhttps://string-db.org/network/679935.Alfi_0010Hypothetical protein.
Alfi_0011 protein networkhttps://string-db.org/network/679935.Alfi_0011HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain.
Alfi_0012 protein networkhttps://string-db.org/network/679935.Alfi_0012Putative transcriptional regulator; PFAM: Helix-turn-helix.
Alfi_0013 protein networkhttps://string-db.org/network/679935.Alfi_0013Uncharacterized protein, possibly involved in aromatic compounds catabolism; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; manually curated.
Alfi_0014 protein networkhttps://string-db.org/network/679935.Alfi_0014PFAM: CAAX amino terminal protease family.
Alfi_0015 protein networkhttps://string-db.org/network/679935.Alfi_0015ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
Alfi_0016 protein networkhttps://string-db.org/network/679935.Alfi_0016ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
Alfi_0019 protein networkhttps://string-db.org/network/679935.Alfi_0019Transposase; Manually curated.
Alfi_0020 protein networkhttps://string-db.org/network/679935.Alfi_0020Transposase; PFAM: Integrase core domain; manually curated.
Alfi_0021 protein networkhttps://string-db.org/network/679935.Alfi_0021Hypothetical protein.
Alfi_0022 protein networkhttps://string-db.org/network/679935.Alfi_0022Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Fami [...]
Alfi_0023 protein networkhttps://string-db.org/network/679935.Alfi_0023TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_0024 protein networkhttps://string-db.org/network/679935.Alfi_0024PFAM: Outer membrane efflux protein.
Alfi_0025 protein networkhttps://string-db.org/network/679935.Alfi_0025PFAM: Bacterial regulatory proteins, tetR family.
Alfi_0027 protein networkhttps://string-db.org/network/679935.Alfi_0027Dipeptide/tripeptide permease; PFAM: POT family.
Alfi_0028 protein networkhttps://string-db.org/network/679935.Alfi_00281,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
Alfi_0029 protein networkhttps://string-db.org/network/679935.Alfi_0029Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
Alfi_0030 protein networkhttps://string-db.org/network/679935.Alfi_0030Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family.
mtaD protein networkhttps://string-db.org/network/679935.Alfi_0031Cytosine deaminase-like metal-dependent hydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respect [...]
Alfi_0032 protein networkhttps://string-db.org/network/679935.Alfi_0032PFAM: Protein of unknown function (DUF1573).
Alfi_0033 protein networkhttps://string-db.org/network/679935.Alfi_0033TIGRFAM: TonB family C-terminal domain.
Alfi_0034 protein networkhttps://string-db.org/network/679935.Alfi_0034PFAM: Biopolymer transport protein ExbD/TolR.
Alfi_0035 protein networkhttps://string-db.org/network/679935.Alfi_0035Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
Alfi_0036 protein networkhttps://string-db.org/network/679935.Alfi_0036Hypothetical protein.
tsaD protein networkhttps://string-db.org/network/679935.Alfi_0037Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the tran [...]
Alfi_0040 protein networkhttps://string-db.org/network/679935.Alfi_00402-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase.
Alfi_0041 protein networkhttps://string-db.org/network/679935.Alfi_0041Hypothetical protein.
Alfi_0042 protein networkhttps://string-db.org/network/679935.Alfi_0042PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
Alfi_0044 protein networkhttps://string-db.org/network/679935.Alfi_0044Hypothetical protein.
Alfi_0045 protein networkhttps://string-db.org/network/679935.Alfi_0045Putative transcriptional regulator; PFAM: Peptidase S24-like.
Alfi_0047 protein networkhttps://string-db.org/network/679935.Alfi_00472-oxoacid:acceptor oxidoreductase, alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit.
Alfi_0048 protein networkhttps://string-db.org/network/679935.Alfi_00482-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
Alfi_0049 protein networkhttps://string-db.org/network/679935.Alfi_0049PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
Alfi_0050 protein networkhttps://string-db.org/network/679935.Alfi_0050Hypothetical protein.
Alfi_0052 protein networkhttps://string-db.org/network/679935.Alfi_0052N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; PA14 domain.
Alfi_0053 protein networkhttps://string-db.org/network/679935.Alfi_0053Arylsulfatase A family protein; PFAM: Sulfatase.
Alfi_0054 protein networkhttps://string-db.org/network/679935.Alfi_0054PFAM: Domain of unknown function (DUF1735).
Alfi_0055 protein networkhttps://string-db.org/network/679935.Alfi_0055Hypothetical protein.
Alfi_0056 protein networkhttps://string-db.org/network/679935.Alfi_0056Hypothetical protein.
Alfi_0057 protein networkhttps://string-db.org/network/679935.Alfi_0057TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_0058 protein networkhttps://string-db.org/network/679935.Alfi_0058Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0059 protein networkhttps://string-db.org/network/679935.Alfi_0059PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0060 protein networkhttps://string-db.org/network/679935.Alfi_0060PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0061 protein networkhttps://string-db.org/network/679935.Alfi_0061Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0062 protein networkhttps://string-db.org/network/679935.Alfi_0062TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_0063 protein networkhttps://string-db.org/network/679935.Alfi_0063Hypothetical protein.
Alfi_0064 protein networkhttps://string-db.org/network/679935.Alfi_0064Hypothetical protein.
Alfi_0065 protein networkhttps://string-db.org/network/679935.Alfi_0065PFAM: Domain of unknown function (DUF1735).
Alfi_0066 protein networkhttps://string-db.org/network/679935.Alfi_0066PFAM: Protein of unknown function (DUF1573).
Alfi_0067 protein networkhttps://string-db.org/network/679935.Alfi_0067PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0068 protein networkhttps://string-db.org/network/679935.Alfi_0068Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0069 protein networkhttps://string-db.org/network/679935.Alfi_0069TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_0070 protein networkhttps://string-db.org/network/679935.Alfi_0070Hypothetical protein.
Alfi_0071 protein networkhttps://string-db.org/network/679935.Alfi_0071Hypothetical protein.
Alfi_0072 protein networkhttps://string-db.org/network/679935.Alfi_0072PFAM: F5/8 type C domain; Domain of unknown function (DUF1735).
Alfi_0073 protein networkhttps://string-db.org/network/679935.Alfi_0073PFAM: Domain of unknown function (DUF1735); Laminin G domain.
Alfi_0074 protein networkhttps://string-db.org/network/679935.Alfi_0074PFAM: Protein of unknown function (DUF1573).
Alfi_0075 protein networkhttps://string-db.org/network/679935.Alfi_0075Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_0076 protein networkhttps://string-db.org/network/679935.Alfi_0076PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
Alfi_0077 protein networkhttps://string-db.org/network/679935.Alfi_0077N-acetyl-beta-hexosaminidase; PFAM: PA14 domain; Glycosyl hydrolase family 20, catalytic domain.
Alfi_0079 protein networkhttps://string-db.org/network/679935.Alfi_0079NhaP-type Na+(K+)/H+ antiporter; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain.
Alfi_0080 protein networkhttps://string-db.org/network/679935.Alfi_0080Hypothetical protein.
Alfi_0081 protein networkhttps://string-db.org/network/679935.Alfi_0081Hypothetical protein.
Alfi_0082 protein networkhttps://string-db.org/network/679935.Alfi_0082TIGRFAM: TonB family C-terminal domain.
lpxC protein networkhttps://string-db.org/network/679935.Alfi_0083Beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step i [...]
Alfi_0084 protein networkhttps://string-db.org/network/679935.Alfi_0084acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
rimP protein networkhttps://string-db.org/network/679935.Alfi_0085Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
nusA protein networkhttps://string-db.org/network/679935.Alfi_0086NusA antitermination factor; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/679935.Alfi_0087Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
Alfi_0088 protein networkhttps://string-db.org/network/679935.Alfi_0088Hypothetical protein.
Alfi_0089 protein networkhttps://string-db.org/network/679935.Alfi_0089PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.
Alfi_0090 protein networkhttps://string-db.org/network/679935.Alfi_0090Putative AP superfamily protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
Alfi_0091 protein networkhttps://string-db.org/network/679935.Alfi_0091Hypothetical protein.
Alfi_0092 protein networkhttps://string-db.org/network/679935.Alfi_0092Hypothetical protein.
Alfi_0096 protein networkhttps://string-db.org/network/679935.Alfi_0096PFAM: Orthopoxvirus protein of unknown function (DUF830); manually curated.
Alfi_0097 protein networkhttps://string-db.org/network/679935.Alfi_0097Putative membrane protein; PFAM: MgtC family.
rpmI protein networkhttps://string-db.org/network/679935.Alfi_0098PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
rplT protein networkhttps://string-db.org/network/679935.Alfi_0099LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing fun [...]
Alfi_0100 protein networkhttps://string-db.org/network/679935.Alfi_0100PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain.
Alfi_0101 protein networkhttps://string-db.org/network/679935.Alfi_0101Hypothetical protein.
Alfi_0102 protein networkhttps://string-db.org/network/679935.Alfi_0102PFAM: Major Facilitator Superfamily.
Alfi_0103 protein networkhttps://string-db.org/network/679935.Alfi_0103Hypothetical protein.
Alfi_0104 protein networkhttps://string-db.org/network/679935.Alfi_0104Putative Zn-dependent hydrolase of beta-lactamase fold protein.
Alfi_0105 protein networkhttps://string-db.org/network/679935.Alfi_0105Copper chaperone; PFAM: Heavy-metal-associated domain.
Alfi_0106 protein networkhttps://string-db.org/network/679935.Alfi_0106Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain.
Alfi_0107 protein networkhttps://string-db.org/network/679935.Alfi_0107Hypothetical protein.
Alfi_0108 protein networkhttps://string-db.org/network/679935.Alfi_0108Hypothetical protein.
Alfi_0109 protein networkhttps://string-db.org/network/679935.Alfi_0109ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family.
Alfi_0110 protein networkhttps://string-db.org/network/679935.Alfi_0110Ribonuclease D; PFAM: 3'-5' exonuclease.
Alfi_0111 protein networkhttps://string-db.org/network/679935.Alfi_0111Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase.
Alfi_0112 protein networkhttps://string-db.org/network/679935.Alfi_0112Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
Alfi_0113 protein networkhttps://string-db.org/network/679935.Alfi_0113Hypothetical protein.
yidC protein networkhttps://string-db.org/network/679935.Alfi_0114Membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. [...]
pyrG protein networkhttps://string-db.org/network/679935.Alfi_0115CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
Alfi_0116 protein networkhttps://string-db.org/network/679935.Alfi_0116PFAM: Domain of Unknown Function (DUF349).
Alfi_0117 protein networkhttps://string-db.org/network/679935.Alfi_0117PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
proB protein networkhttps://string-db.org/network/679935.Alfi_0118Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
proA protein networkhttps://string-db.org/network/679935.Alfi_0119Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cycl [...]
crcB protein networkhttps://string-db.org/network/679935.Alfi_0120Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
ackA protein networkhttps://string-db.org/network/679935.Alfi_0121Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
Alfi_0122 protein networkhttps://string-db.org/network/679935.Alfi_0122Phosphotransacetylase; PFAM: Phosphate acetyl/butaryl transferase.
buk protein networkhttps://string-db.org/network/679935.Alfi_0123PFAM: Acetokinase family; TIGRFAM: butyrate kinase; Belongs to the acetokinase family.
Alfi_0124 protein networkhttps://string-db.org/network/679935.Alfi_0124Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
Alfi_0125 protein networkhttps://string-db.org/network/679935.Alfi_0125PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
aroQ protein networkhttps://string-db.org/network/679935.Alfi_01263-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
thiL protein networkhttps://string-db.org/network/679935.Alfi_0127Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamin [...]
Alfi_0128 protein networkhttps://string-db.org/network/679935.Alfi_0128PFAM: Septum formation initiator.
queE protein networkhttps://string-db.org/network/679935.Alfi_0129Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to [...]
Alfi_0130 protein networkhttps://string-db.org/network/679935.Alfi_0130PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
Alfi_0131 protein networkhttps://string-db.org/network/679935.Alfi_0131Hypothetical protein.
rnfA protein networkhttps://string-db.org/network/679935.Alfi_0132Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfE protein networkhttps://string-db.org/network/679935.Alfi_0133Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
Alfi_0134 protein networkhttps://string-db.org/network/679935.Alfi_0134PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit.
rnfD protein networkhttps://string-db.org/network/679935.Alfi_0135Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD fam [...]
rnfC protein networkhttps://string-db.org/network/679935.Alfi_0136Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
rnfB protein networkhttps://string-db.org/network/679935.Alfi_0137Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
Alfi_0138 protein networkhttps://string-db.org/network/679935.Alfi_0138PFAM: Positive regulator of sigma(E), RseC/MucC.
Alfi_0139 protein networkhttps://string-db.org/network/679935.Alfi_0139NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase.
Alfi_0140 protein networkhttps://string-db.org/network/679935.Alfi_0140Cupin domain-containing protein; PFAM: Cupin domain.
Alfi_0141 protein networkhttps://string-db.org/network/679935.Alfi_0141Zn-ribbon protein, possibly nucleic acid-binding protein; PFAM: Putative zinc ribbon domain.
Alfi_0142 protein networkhttps://string-db.org/network/679935.Alfi_0142PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family.
Alfi_0143 protein networkhttps://string-db.org/network/679935.Alfi_0143Putative transcriptional regulator; PFAM: MerR family regulatory protein.
Alfi_0144 protein networkhttps://string-db.org/network/679935.Alfi_0144tRNA/rRNA cytosine-C5-methylase; PFAM: NOL1/NOP2/sun family.
Alfi_0145 protein networkhttps://string-db.org/network/679935.Alfi_0145PFAM: Deoxynucleoside kinase.
Alfi_0146 protein networkhttps://string-db.org/network/679935.Alfi_0146PFAM: GH3 auxin-responsive promoter.
Alfi_0147 protein networkhttps://string-db.org/network/679935.Alfi_0147K+ transport system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain.
Alfi_0148 protein networkhttps://string-db.org/network/679935.Alfi_0148Hypothetical protein.
Alfi_0149 protein networkhttps://string-db.org/network/679935.Alfi_0149Hypothetical protein.
cysQ protein networkhttps://string-db.org/network/679935.Alfi_01503'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
Alfi_0151 protein networkhttps://string-db.org/network/679935.Alfi_0151Hypothetical protein.
Alfi_0152 protein networkhttps://string-db.org/network/679935.Alfi_0152Hypothetical protein.
Alfi_0153 protein networkhttps://string-db.org/network/679935.Alfi_0153PFAM: Response regulator receiver domain; manually curated.
rplU protein networkhttps://string-db.org/network/679935.Alfi_0154LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
rpmA protein networkhttps://string-db.org/network/679935.Alfi_0155PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
Alfi_0156 protein networkhttps://string-db.org/network/679935.Alfi_0156Heat shock protein; PFAM: META domain.
Alfi_0157 protein networkhttps://string-db.org/network/679935.Alfi_0157Hypothetical protein.
Alfi_0159 protein networkhttps://string-db.org/network/679935.Alfi_0159Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TP [...]
Alfi_0160 protein networkhttps://string-db.org/network/679935.Alfi_0160Hypothetical protein.
Alfi_0161 protein networkhttps://string-db.org/network/679935.Alfi_0161Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
Alfi_0162 protein networkhttps://string-db.org/network/679935.Alfi_0162Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain.
rsmA protein networkhttps://string-db.org/network/679935.Alfi_0163Dimethyladenosine transferase (rRNA methylation); Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S par [...]
Alfi_0165 protein networkhttps://string-db.org/network/679935.Alfi_0165Hypothetical protein.
Alfi_0166 protein networkhttps://string-db.org/network/679935.Alfi_0166Hypothetical protein.
Alfi_0167 protein networkhttps://string-db.org/network/679935.Alfi_0167ATP-dependent DNA helicase RecQ; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, [...]
Alfi_0168 protein networkhttps://string-db.org/network/679935.Alfi_0168PFAM: Phosphate-selective porin O and P.
Alfi_0169 protein networkhttps://string-db.org/network/679935.Alfi_0169ABC-type (unclassified) transport system, ATPase component; PFAM: ABC transporter.
aroA protein networkhttps://string-db.org/network/679935.Alfi_01703-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
aroC protein networkhttps://string-db.org/network/679935.Alfi_0171Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
Alfi_0172 protein networkhttps://string-db.org/network/679935.Alfi_0172PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific.
recX protein networkhttps://string-db.org/network/679935.Alfi_0173Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
Alfi_0174 protein networkhttps://string-db.org/network/679935.Alfi_0174Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
Alfi_0175 protein networkhttps://string-db.org/network/679935.Alfi_0175CheY-like receiver domain-containing protein; PFAM: Response regulator receiver domain.
Alfi_0176 protein networkhttps://string-db.org/network/679935.Alfi_0176Hypothetical protein; Belongs to the 'phage' integrase family.
Alfi_0178 protein networkhttps://string-db.org/network/679935.Alfi_0178PFAM: Protein of unknown function (DUF2693).
Alfi_0179 protein networkhttps://string-db.org/network/679935.Alfi_0179Hypothetical protein.
Alfi_0180 protein networkhttps://string-db.org/network/679935.Alfi_0180Hypothetical protein.
Alfi_0181 protein networkhttps://string-db.org/network/679935.Alfi_0181Hypothetical protein.
Alfi_0182 protein networkhttps://string-db.org/network/679935.Alfi_0182Hypothetical protein.
Alfi_0183 protein networkhttps://string-db.org/network/679935.Alfi_0183Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family.
Alfi_0184 protein networkhttps://string-db.org/network/679935.Alfi_0184Hypothetical protein; Manually curated.
Alfi_0185 protein networkhttps://string-db.org/network/679935.Alfi_0185Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
Alfi_0186 protein networkhttps://string-db.org/network/679935.Alfi_0186PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family.
Alfi_0188 protein networkhttps://string-db.org/network/679935.Alfi_0188Hypothetical protein.
Alfi_0189 protein networkhttps://string-db.org/network/679935.Alfi_0189Hypothetical protein.
Alfi_0190 protein networkhttps://string-db.org/network/679935.Alfi_0190Hypothetical protein.
Alfi_0191 protein networkhttps://string-db.org/network/679935.Alfi_0191Hypothetical protein.
Alfi_0192 protein networkhttps://string-db.org/network/679935.Alfi_0192Hypothetical protein.
Alfi_0193 protein networkhttps://string-db.org/network/679935.Alfi_0193Hypothetical protein.
Alfi_0194 protein networkhttps://string-db.org/network/679935.Alfi_0194PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
Alfi_0195 protein networkhttps://string-db.org/network/679935.Alfi_0195Transposase; Manually curated.
Alfi_0196 protein networkhttps://string-db.org/network/679935.Alfi_0196Transposase; PFAM: Integrase core domain; manually curated.
Alfi_0197 protein networkhttps://string-db.org/network/679935.Alfi_0197Hypothetical protein.
Alfi_0198 protein networkhttps://string-db.org/network/679935.Alfi_0198Hypothetical protein.
Alfi_0199 protein networkhttps://string-db.org/network/679935.Alfi_0199Hypothetical protein.
Alfi_0200 protein networkhttps://string-db.org/network/679935.Alfi_0200Hypothetical protein.
Alfi_0201 protein networkhttps://string-db.org/network/679935.Alfi_0201Hypothetical protein.
Alfi_0202 protein networkhttps://string-db.org/network/679935.Alfi_0202Type IV secretory pathway, VirD4 component; PFAM: TraG/TraD family.
Alfi_0203 protein networkhttps://string-db.org/network/679935.Alfi_0203Hypothetical protein.
Alfi_0204 protein networkhttps://string-db.org/network/679935.Alfi_0204Hypothetical protein.
Alfi_0205 protein networkhttps://string-db.org/network/679935.Alfi_0205Hypothetical protein.
Alfi_0206 protein networkhttps://string-db.org/network/679935.Alfi_0206Hypothetical protein.
Alfi_0207 protein networkhttps://string-db.org/network/679935.Alfi_0207Hypothetical protein.
Alfi_0208 protein networkhttps://string-db.org/network/679935.Alfi_0208Hypothetical protein.
Alfi_0209 protein networkhttps://string-db.org/network/679935.Alfi_0209PFAM: Protein of unknown function (DUF3714).
Alfi_0210 protein networkhttps://string-db.org/network/679935.Alfi_0210PFAM: Conjugal transfer protein.
Alfi_0211 protein networkhttps://string-db.org/network/679935.Alfi_0211Hypothetical protein.
Alfi_0212 protein networkhttps://string-db.org/network/679935.Alfi_0212Hypothetical protein.
Alfi_0213 protein networkhttps://string-db.org/network/679935.Alfi_0213Hypothetical protein.
Alfi_0214 protein networkhttps://string-db.org/network/679935.Alfi_0214Hypothetical protein.
Alfi_0215 protein networkhttps://string-db.org/network/679935.Alfi_0215ORF6N domain-containing protein; PFAM: ORF6N domain.
Alfi_0216 protein networkhttps://string-db.org/network/679935.Alfi_0216ORF6N domain-containing protein; PFAM: ORF6N domain.
Alfi_0217 protein networkhttps://string-db.org/network/679935.Alfi_0217Hypothetical protein.
Alfi_0220 protein networkhttps://string-db.org/network/679935.Alfi_0220Hypothetical protein.
Alfi_0221 protein networkhttps://string-db.org/network/679935.Alfi_0221Hypothetical protein.
Alfi_0222 protein networkhttps://string-db.org/network/679935.Alfi_0222Hypothetical protein.
Alfi_0223 protein networkhttps://string-db.org/network/679935.Alfi_0223Hypothetical protein.
Alfi_0225 protein networkhttps://string-db.org/network/679935.Alfi_0225Hypothetical protein.
Alfi_0226 protein networkhttps://string-db.org/network/679935.Alfi_0226PFAM: Protein of unknown function (DUF1812).
Alfi_0227 protein networkhttps://string-db.org/network/679935.Alfi_0227ORF6N domain-containing protein; PFAM: ORF6N domain.
Alfi_0228 protein networkhttps://string-db.org/network/679935.Alfi_0228Hypothetical protein.
Alfi_0229 protein networkhttps://string-db.org/network/679935.Alfi_0229PFAM: Zinc finger found in FPG and IleRS; manually curated.
Alfi_0230 protein networkhttps://string-db.org/network/679935.Alfi_0230PFAM: Protein of unknown function (DUF3575).
Alfi_0231 protein networkhttps://string-db.org/network/679935.Alfi_0231Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; manually curated.
Alfi_0232 protein networkhttps://string-db.org/network/679935.Alfi_0232Hypothetical protein.
Alfi_0233 protein networkhttps://string-db.org/network/679935.Alfi_0233Hypothetical protein.
Alfi_0234 protein networkhttps://string-db.org/network/679935.Alfi_0234ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_0235 protein networkhttps://string-db.org/network/679935.Alfi_0235Protein involved in initiation of plasmid replication; PFAM: Initiator Replication protein; manually curated.
Alfi_0236 protein networkhttps://string-db.org/network/679935.Alfi_0236Hypothetical protein.
rpsP protein networkhttps://string-db.org/network/679935.Alfi_0237PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
rimM protein networkhttps://string-db.org/network/679935.Alfi_0238Hypothetical protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential [...]
mnmA protein networkhttps://string-db.org/network/679935.Alfi_0239tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
Alfi_0240 protein networkhttps://string-db.org/network/679935.Alfi_0240PFAM: Protein of unknown function (DUF419).
Alfi_0241 protein networkhttps://string-db.org/network/679935.Alfi_0241Helix-turn-helix protein; Manually curated.
Alfi_0242 protein networkhttps://string-db.org/network/679935.Alfi_0242Hypothetical protein.
Alfi_0243 protein networkhttps://string-db.org/network/679935.Alfi_0243Pyruvate phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosp [...]
Alfi_0244 protein networkhttps://string-db.org/network/679935.Alfi_0244Hypothetical protein.
Alfi_0245 protein networkhttps://string-db.org/network/679935.Alfi_0245Hypothetical protein.
def protein networkhttps://string-db.org/network/679935.Alfi_0248Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
Alfi_0249 protein networkhttps://string-db.org/network/679935.Alfi_0249RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
glyQS protein networkhttps://string-db.org/network/679935.Alfi_0250glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
Alfi_0251 protein networkhttps://string-db.org/network/679935.Alfi_0251Hypothetical protein.
Alfi_0252 protein networkhttps://string-db.org/network/679935.Alfi_0252DNA repair protein radc; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; Belongs to the UPF0758 family.
rnc protein networkhttps://string-db.org/network/679935.Alfi_0253Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
Alfi_0254 protein networkhttps://string-db.org/network/679935.Alfi_0254Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
acpP protein networkhttps://string-db.org/network/679935.Alfi_0255Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
Alfi_0256 protein networkhttps://string-db.org/network/679935.Alfi_0256PFAM: Peptidase family S51; Belongs to the peptidase S51 family.
Alfi_0257 protein networkhttps://string-db.org/network/679935.Alfi_0257PFAM: Prephenate dehydrogenase.
Alfi_0258 protein networkhttps://string-db.org/network/679935.Alfi_0258Putative endonuclease related to Holliday junction resolvase; PFAM: Uncharacterised protein family UPF0102; Belongs to the UPF0102 family.
Alfi_0259 protein networkhttps://string-db.org/network/679935.Alfi_02593-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV( [...]
Alfi_0260 protein networkhttps://string-db.org/network/679935.Alfi_0260PFAM: Histidine acid phosphatase.
Alfi_0261 protein networkhttps://string-db.org/network/679935.Alfi_0261Hypothetical protein; PFAM: Serine dehydratase alpha chain; Belongs to the UPF0597 family.
Alfi_0262 protein networkhttps://string-db.org/network/679935.Alfi_0262NTP pyrophosphohydrolase; PFAM: NUDIX domain.
Alfi_0263 protein networkhttps://string-db.org/network/679935.Alfi_0263Hypothetical protein; PFAM: Acyltransferase family.
Alfi_0264 protein networkhttps://string-db.org/network/679935.Alfi_0264PFAM: Nitroreductase family.
Alfi_0265 protein networkhttps://string-db.org/network/679935.Alfi_0265Hypothetical protein.
Alfi_0266 protein networkhttps://string-db.org/network/679935.Alfi_0266PFAM: Acetyltransferase (GNAT) family.
Alfi_0267 protein networkhttps://string-db.org/network/679935.Alfi_0267Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
cutC protein networkhttps://string-db.org/network/679935.Alfi_0268Uncharacterized protein involved in copper resistance; Participates in the control of copper homeostasis. Belongs to the CutC family.
Alfi_0269 protein networkhttps://string-db.org/network/679935.Alfi_0269Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
Alfi_0270 protein networkhttps://string-db.org/network/679935.Alfi_0270cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain.
Alfi_0271 protein networkhttps://string-db.org/network/679935.Alfi_0271Na+-driven multidrug efflux pump; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
def-2 protein networkhttps://string-db.org/network/679935.Alfi_0272Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
Alfi_0273 protein networkhttps://string-db.org/network/679935.Alfi_0273PFAM: Acetyltransferase (GNAT) family.
Alfi_0275 protein networkhttps://string-db.org/network/679935.Alfi_0275Hypothetical protein.
Alfi_0276 protein networkhttps://string-db.org/network/679935.Alfi_0276Hypothetical protein; PFAM: 37-kD nucleoid-associated bacterial protein.
Alfi_0277 protein networkhttps://string-db.org/network/679935.Alfi_02772-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase.
Alfi_0278 protein networkhttps://string-db.org/network/679935.Alfi_0278Hypothetical protein.
Alfi_0279 protein networkhttps://string-db.org/network/679935.Alfi_0279Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
Alfi_0280 protein networkhttps://string-db.org/network/679935.Alfi_0280cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain.
Alfi_0282 protein networkhttps://string-db.org/network/679935.Alfi_0282Hypothetical protein.
Alfi_0284 protein networkhttps://string-db.org/network/679935.Alfi_0284Hypothetical protein.
Alfi_0285 protein networkhttps://string-db.org/network/679935.Alfi_0285Hypothetical protein.
Alfi_0286 protein networkhttps://string-db.org/network/679935.Alfi_0286Hypothetical protein.
Alfi_0288 protein networkhttps://string-db.org/network/679935.Alfi_0288Hypothetical protein.
Alfi_0289 protein networkhttps://string-db.org/network/679935.Alfi_0289Putative aspartyl protease; PFAM: Tetratricopeptide repeat; TIGRFAM: clan AA aspartic protease, TIGR02281 family.
Alfi_0290 protein networkhttps://string-db.org/network/679935.Alfi_0290Hypothetical protein.
Alfi_0291 protein networkhttps://string-db.org/network/679935.Alfi_0291Hypothetical protein.
Alfi_0292 protein networkhttps://string-db.org/network/679935.Alfi_0292Hypothetical protein.
Alfi_0293 protein networkhttps://string-db.org/network/679935.Alfi_0293Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
Alfi_0294 protein networkhttps://string-db.org/network/679935.Alfi_0294Hypothetical protein.
Alfi_0295 protein networkhttps://string-db.org/network/679935.Alfi_0295Hypothetical protein.
Alfi_0296 protein networkhttps://string-db.org/network/679935.Alfi_0296Hypothetical protein.
Alfi_0297 protein networkhttps://string-db.org/network/679935.Alfi_0297Hypothetical protein.
Alfi_0298 protein networkhttps://string-db.org/network/679935.Alfi_0298Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0299 protein networkhttps://string-db.org/network/679935.Alfi_0299Hypothetical protein.
Alfi_0300 protein networkhttps://string-db.org/network/679935.Alfi_0300Hypothetical protein.
Alfi_0301 protein networkhttps://string-db.org/network/679935.Alfi_0301RagB/SusD family protein; PFAM: SusD family.
Alfi_0302 protein networkhttps://string-db.org/network/679935.Alfi_0302TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0303 protein networkhttps://string-db.org/network/679935.Alfi_0303Hypothetical protein.
Alfi_0304 protein networkhttps://string-db.org/network/679935.Alfi_0304Subtilisin-like serine protease; PFAM: Subtilase family.
Alfi_0305 protein networkhttps://string-db.org/network/679935.Alfi_0305Hypothetical protein.
Alfi_0306 protein networkhttps://string-db.org/network/679935.Alfi_0306RagB/SusD family protein; PFAM: SusD family.
Alfi_0307 protein networkhttps://string-db.org/network/679935.Alfi_0307TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0308 protein networkhttps://string-db.org/network/679935.Alfi_0308Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0309 protein networkhttps://string-db.org/network/679935.Alfi_0309TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0310 protein networkhttps://string-db.org/network/679935.Alfi_0310RagB/SusD family protein; PFAM: SusD family.
Alfi_0311 protein networkhttps://string-db.org/network/679935.Alfi_0311Hypothetical protein.
Alfi_0312 protein networkhttps://string-db.org/network/679935.Alfi_0312Hypothetical protein.
Alfi_0314 protein networkhttps://string-db.org/network/679935.Alfi_0314Hypothetical protein.
Alfi_0315 protein networkhttps://string-db.org/network/679935.Alfi_0315Putative flavoprotein; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
Alfi_0316 protein networkhttps://string-db.org/network/679935.Alfi_0316Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehyd [...]
Alfi_0317 protein networkhttps://string-db.org/network/679935.Alfi_0317PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family.
Alfi_0318 protein networkhttps://string-db.org/network/679935.Alfi_0318Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_0319 protein networkhttps://string-db.org/network/679935.Alfi_0319Putative membrane protein; PFAM: Rhomboid family.
mutL protein networkhttps://string-db.org/network/679935.Alfi_0320DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
Alfi_0321 protein networkhttps://string-db.org/network/679935.Alfi_0321Hypothetical protein.
dnaJ protein networkhttps://string-db.org/network/679935.Alfi_0322Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
grpE protein networkhttps://string-db.org/network/679935.Alfi_0323Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with [...]
Alfi_0324 protein networkhttps://string-db.org/network/679935.Alfi_0324Putative methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family.
Alfi_0325 protein networkhttps://string-db.org/network/679935.Alfi_0325Hypothetical protein.
Alfi_0326 protein networkhttps://string-db.org/network/679935.Alfi_0326Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
mutS2 protein networkhttps://string-db.org/network/679935.Alfi_0327Mismatch repair ATPase (MutS family); Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; [...]
Alfi_0328 protein networkhttps://string-db.org/network/679935.Alfi_0328ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
Alfi_0329 protein networkhttps://string-db.org/network/679935.Alfi_0329PFAM: N-acetylmuramoyl-L-alanine amidase.
Alfi_0330 protein networkhttps://string-db.org/network/679935.Alfi_0330Hypothetical protein.
Alfi_0331 protein networkhttps://string-db.org/network/679935.Alfi_0331PFAM: Nitroreductase family.
Alfi_0332 protein networkhttps://string-db.org/network/679935.Alfi_0332Putative acyltransferase; PFAM: Acetyltransferase (GNAT) family.
Alfi_0335 protein networkhttps://string-db.org/network/679935.Alfi_0335Hypothetical protein.
Alfi_0336 protein networkhttps://string-db.org/network/679935.Alfi_0336Zn-dependent oligopeptidase; PFAM: Peptidase family M3.
Alfi_0337 protein networkhttps://string-db.org/network/679935.Alfi_0337Peptidyl-dipeptidase Dcp; PFAM: Peptidase family M3.
Alfi_0338 protein networkhttps://string-db.org/network/679935.Alfi_0338RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
Alfi_0339 protein networkhttps://string-db.org/network/679935.Alfi_0339Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
Alfi_0340 protein networkhttps://string-db.org/network/679935.Alfi_0340Formate hydrogenlyase subunit 4; PFAM: NADH dehydrogenase.
Alfi_0341 protein networkhttps://string-db.org/network/679935.Alfi_0341Hydrogenase 4 membrane component (E).
Alfi_0342 protein networkhttps://string-db.org/network/679935.Alfi_0342Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
Alfi_0343 protein networkhttps://string-db.org/network/679935.Alfi_0343Ni,Fe-hydrogenase III large subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit.
Alfi_0344 protein networkhttps://string-db.org/network/679935.Alfi_0344Ni,Fe-hydrogenase III small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit.
Alfi_0345 protein networkhttps://string-db.org/network/679935.Alfi_0345PFAM: Chromate transporter.
Alfi_0346 protein networkhttps://string-db.org/network/679935.Alfi_0346PFAM: Chromate transporter.
Alfi_0348 protein networkhttps://string-db.org/network/679935.Alfi_0348Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase.
Alfi_0349 protein networkhttps://string-db.org/network/679935.Alfi_0349Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain.
Alfi_0350 protein networkhttps://string-db.org/network/679935.Alfi_0350Collagenase-like protease; PFAM: Collagenase; Peptidase family U32.
Alfi_0351 protein networkhttps://string-db.org/network/679935.Alfi_0351Hypothetical protein.
Alfi_0352 protein networkhttps://string-db.org/network/679935.Alfi_0352PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase.
Alfi_0353 protein networkhttps://string-db.org/network/679935.Alfi_03534Fe-4S protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
Alfi_0354 protein networkhttps://string-db.org/network/679935.Alfi_0354Hypothetical protein.
Alfi_0355 protein networkhttps://string-db.org/network/679935.Alfi_0355Hypothetical protein.
Alfi_0356 protein networkhttps://string-db.org/network/679935.Alfi_0356Hypothetical protein.
Alfi_0357 protein networkhttps://string-db.org/network/679935.Alfi_0357PFAM: Protein of unknown function (DUF1343).
prfB protein networkhttps://string-db.org/network/679935.Alfi_0358Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
Alfi_0359 protein networkhttps://string-db.org/network/679935.Alfi_0359Hypothetical protein.
Alfi_0360 protein networkhttps://string-db.org/network/679935.Alfi_0360PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
cysS protein networkhttps://string-db.org/network/679935.Alfi_0361PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
Alfi_0362 protein networkhttps://string-db.org/network/679935.Alfi_0362DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
Alfi_0363 protein networkhttps://string-db.org/network/679935.Alfi_0363D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
Alfi_0364 protein networkhttps://string-db.org/network/679935.Alfi_0364alpha-L-fucosidase; PFAM: F5/8 type C domain; Alpha-L-fucosidase.
Alfi_0365 protein networkhttps://string-db.org/network/679935.Alfi_0365Di-/tricarboxylate transporter; PFAM: Protein of unknown function (DUF2723).
Alfi_0371 protein networkhttps://string-db.org/network/679935.Alfi_0371AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme.
Alfi_0372 protein networkhttps://string-db.org/network/679935.Alfi_0372Uncharacterized Fe-S protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative.
Alfi_0373 protein networkhttps://string-db.org/network/679935.Alfi_0373Hypothetical protein.
tadA protein networkhttps://string-db.org/network/679935.Alfi_0374Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
aspS protein networkhttps://string-db.org/network/679935.Alfi_0375aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor [...]
Alfi_0377 protein networkhttps://string-db.org/network/679935.Alfi_0377PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).
Alfi_0378 protein networkhttps://string-db.org/network/679935.Alfi_0378TIGRFAM: phosphoesterase, MJ0936 family.
Alfi_0381 protein networkhttps://string-db.org/network/679935.Alfi_0381Hypothetical protein.
Alfi_0382 protein networkhttps://string-db.org/network/679935.Alfi_0382ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (A [...]
Alfi_0383 protein networkhttps://string-db.org/network/679935.Alfi_0383PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
Alfi_0384 protein networkhttps://string-db.org/network/679935.Alfi_0384PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
Alfi_0385 protein networkhttps://string-db.org/network/679935.Alfi_0385Putative PSP1-like protein; PFAM: PSP1 C-terminal conserved region.
Alfi_0386 protein networkhttps://string-db.org/network/679935.Alfi_0386Hypothetical protein.
trmB protein networkhttps://string-db.org/network/679935.Alfi_0387Putative S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
Alfi_0388 protein networkhttps://string-db.org/network/679935.Alfi_0388Putative transcriptional regulator; PFAM: Penicillinase repressor.
Alfi_0389 protein networkhttps://string-db.org/network/679935.Alfi_0389Hypothetical protein.
Alfi_0390 protein networkhttps://string-db.org/network/679935.Alfi_0390TonB family protein; PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain; Gram-negative bacterial tonB protein; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, si [...]
Alfi_0391 protein networkhttps://string-db.org/network/679935.Alfi_0391Hypothetical protein.
ung protein networkhttps://string-db.org/network/679935.Alfi_0392Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
menA protein networkhttps://string-db.org/network/679935.Alfi_03931,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
Alfi_0394 protein networkhttps://string-db.org/network/679935.Alfi_0394RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
Alfi_0395 protein networkhttps://string-db.org/network/679935.Alfi_0395Periplasmic serine protease, Do/DeqQ family; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family.
metK protein networkhttps://string-db.org/network/679935.Alfi_0396Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet format [...]
Alfi_0399 protein networkhttps://string-db.org/network/679935.Alfi_0399Hypothetical protein.
Alfi_0400 protein networkhttps://string-db.org/network/679935.Alfi_0400PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_0401 protein networkhttps://string-db.org/network/679935.Alfi_0401Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0402 protein networkhttps://string-db.org/network/679935.Alfi_0402Hypothetical protein.
Alfi_0403 protein networkhttps://string-db.org/network/679935.Alfi_0403Hypothetical protein; Manually curated.
Alfi_0404 protein networkhttps://string-db.org/network/679935.Alfi_0404Zn-ribbon protein, possibly nucleic acid-binding protein; PFAM: Plasmid recombination enzyme.
Alfi_0405 protein networkhttps://string-db.org/network/679935.Alfi_0405PFAM: Protein of unknown function (DUF1266).
Alfi_0406 protein networkhttps://string-db.org/network/679935.Alfi_0406Hypothetical protein.
Alfi_0407 protein networkhttps://string-db.org/network/679935.Alfi_0407Hypothetical protein; PFAM: MORN repeat variant.
Alfi_0408 protein networkhttps://string-db.org/network/679935.Alfi_0408Hypothetical protein.
Alfi_0409 protein networkhttps://string-db.org/network/679935.Alfi_0409PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Belongs to the transketolase family.
clpX protein networkhttps://string-db.org/network/679935.Alfi_0410Endopeptidase Clp ATP-binding regulatory subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in [...]
clpP protein networkhttps://string-db.org/network/679935.Alfi_0411Protease subunit of ATP-dependent protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation [...]
Alfi_0412 protein networkhttps://string-db.org/network/679935.Alfi_0412FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor.
Alfi_0413 protein networkhttps://string-db.org/network/679935.Alfi_0413PFAM: Glutamine cyclotransferase.
Alfi_0414 protein networkhttps://string-db.org/network/679935.Alfi_0414Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates [...]
Alfi_0415 protein networkhttps://string-db.org/network/679935.Alfi_0415PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
Alfi_0416 protein networkhttps://string-db.org/network/679935.Alfi_0416Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase.
rnr protein networkhttps://string-db.org/network/679935.Alfi_0417RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
mqnC protein networkhttps://string-db.org/network/679935.Alfi_0418De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis [...]
Alfi_0419 protein networkhttps://string-db.org/network/679935.Alfi_0419PFAM: Glycoside hydrolase 97.
Alfi_0420 protein networkhttps://string-db.org/network/679935.Alfi_0420PFAM: Protein of unknown function (DUF1237).
Alfi_0421 protein networkhttps://string-db.org/network/679935.Alfi_0421PFAM: Glycosyl hydrolase family 76.
Alfi_0422 protein networkhttps://string-db.org/network/679935.Alfi_0422Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
Alfi_0423 protein networkhttps://string-db.org/network/679935.Alfi_0423PFAM: Y_Y_Y domain; Two component regulator propeller; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain.
Alfi_0424 protein networkhttps://string-db.org/network/679935.Alfi_0424PFAM: Glycosyl hydrolase family 76.
Alfi_0425 protein networkhttps://string-db.org/network/679935.Alfi_0425Hypothetical protein.
Alfi_0426 protein networkhttps://string-db.org/network/679935.Alfi_0426Hypothetical protein.
Alfi_0427 protein networkhttps://string-db.org/network/679935.Alfi_0427RagB/SusD family protein; PFAM: SusD family.
Alfi_0428 protein networkhttps://string-db.org/network/679935.Alfi_0428TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0429 protein networkhttps://string-db.org/network/679935.Alfi_0429Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain.
Alfi_0430 protein networkhttps://string-db.org/network/679935.Alfi_0430PFAM: ATP synthase subunit C.
Alfi_0431 protein networkhttps://string-db.org/network/679935.Alfi_0431PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family.
Alfi_0432 protein networkhttps://string-db.org/network/679935.Alfi_0432PFAM: ATP synthase subunit D.
Alfi_0433 protein networkhttps://string-db.org/network/679935.Alfi_0433Archaeal/vacuolar-type H+-ATPase subunit B; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain.
atpA protein networkhttps://string-db.org/network/679935.Alfi_0434Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase al [...]
Alfi_0435 protein networkhttps://string-db.org/network/679935.Alfi_0435PFAM: Protein of unknown function (DUF2764).
Alfi_0436 protein networkhttps://string-db.org/network/679935.Alfi_0436Hypothetical protein.
Alfi_0437 protein networkhttps://string-db.org/network/679935.Alfi_0437Transcriptional regulator/sugar kinase; PFAM: ROK family.
Alfi_0438 protein networkhttps://string-db.org/network/679935.Alfi_0438Hypothetical protein.
murB protein networkhttps://string-db.org/network/679935.Alfi_0439UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
tilS protein networkhttps://string-db.org/network/679935.Alfi_0440tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
Alfi_0441 protein networkhttps://string-db.org/network/679935.Alfi_0441PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.
Alfi_0442 protein networkhttps://string-db.org/network/679935.Alfi_0442Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase class IV.
Alfi_0443 protein networkhttps://string-db.org/network/679935.Alfi_0443Hypothetical protein.
coaD protein networkhttps://string-db.org/network/679935.Alfi_0444Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
lpxD protein networkhttps://string-db.org/network/679935.Alfi_0445UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lip [...]
Alfi_0446 protein networkhttps://string-db.org/network/679935.Alfi_0446Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
ruvC protein networkhttps://string-db.org/network/679935.Alfi_0447Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with [...]
Alfi_0448 protein networkhttps://string-db.org/network/679935.Alfi_0448Peroxiredoxin; PFAM: AhpC/TSA family.
Alfi_0450 protein networkhttps://string-db.org/network/679935.Alfi_0450Hypothetical protein.
Alfi_0451 protein networkhttps://string-db.org/network/679935.Alfi_0451Hypothetical protein.
Alfi_0452 protein networkhttps://string-db.org/network/679935.Alfi_0452Hypothetical protein.
Alfi_0453 protein networkhttps://string-db.org/network/679935.Alfi_0453Hypothetical protein.
Alfi_0454 protein networkhttps://string-db.org/network/679935.Alfi_0454Hypothetical protein.
Alfi_0455 protein networkhttps://string-db.org/network/679935.Alfi_0455Hypothetical protein.
Alfi_0456 protein networkhttps://string-db.org/network/679935.Alfi_0456Putative transcriptional regulator; PFAM: Helix-turn-helix.
Alfi_0457 protein networkhttps://string-db.org/network/679935.Alfi_0457Protein involved in cell division; PFAM: Fic/DOC family.
Alfi_0460 protein networkhttps://string-db.org/network/679935.Alfi_0460Hypothetical protein.
Alfi_0461 protein networkhttps://string-db.org/network/679935.Alfi_0461Hypothetical protein.
Alfi_0462 protein networkhttps://string-db.org/network/679935.Alfi_0462Hypothetical protein.
Alfi_0463 protein networkhttps://string-db.org/network/679935.Alfi_0463Hypothetical protein.
Alfi_0464 protein networkhttps://string-db.org/network/679935.Alfi_0464Hypothetical protein.
Alfi_0465 protein networkhttps://string-db.org/network/679935.Alfi_0465Hypothetical protein.
Alfi_0466 protein networkhttps://string-db.org/network/679935.Alfi_0466Hypothetical protein.
Alfi_0467 protein networkhttps://string-db.org/network/679935.Alfi_0467Hypothetical protein.
Alfi_0468 protein networkhttps://string-db.org/network/679935.Alfi_0468Hypothetical protein.
Alfi_0469 protein networkhttps://string-db.org/network/679935.Alfi_0469PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase.
Alfi_0470 protein networkhttps://string-db.org/network/679935.Alfi_0470Hypothetical protein.
Alfi_0471 protein networkhttps://string-db.org/network/679935.Alfi_0471Hypothetical protein.
Alfi_0472 protein networkhttps://string-db.org/network/679935.Alfi_0472Hypothetical protein.
Alfi_0473 protein networkhttps://string-db.org/network/679935.Alfi_0473Hypothetical protein.
Alfi_0474 protein networkhttps://string-db.org/network/679935.Alfi_0474Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0475 protein networkhttps://string-db.org/network/679935.Alfi_0475PFAM: Thioredoxin; TIGRFAM: thioredoxin.
Alfi_0476 protein networkhttps://string-db.org/network/679935.Alfi_0476Hypothetical protein.
Alfi_0477 protein networkhttps://string-db.org/network/679935.Alfi_0477Transcriptional regulator; PFAM: MarR family.
Alfi_0478 protein networkhttps://string-db.org/network/679935.Alfi_0478Hypothetical protein.
Alfi_0479 protein networkhttps://string-db.org/network/679935.Alfi_0479TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0480 protein networkhttps://string-db.org/network/679935.Alfi_0480Hypothetical protein.
Alfi_0481 protein networkhttps://string-db.org/network/679935.Alfi_0481Hypothetical protein.
Alfi_0482 protein networkhttps://string-db.org/network/679935.Alfi_0482PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_0483 protein networkhttps://string-db.org/network/679935.Alfi_0483Hypothetical protein.
Alfi_0484 protein networkhttps://string-db.org/network/679935.Alfi_0484PFAM: Plasmid recombination enzyme.
Alfi_0485 protein networkhttps://string-db.org/network/679935.Alfi_0485Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0486 protein networkhttps://string-db.org/network/679935.Alfi_0486Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
Alfi_0487 protein networkhttps://string-db.org/network/679935.Alfi_04872-oxoacid:ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit.
Alfi_0488 protein networkhttps://string-db.org/network/679935.Alfi_0488PFAM: Aminotransferase class I and II.
Alfi_0489 protein networkhttps://string-db.org/network/679935.Alfi_0489PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain.
Alfi_0490 protein networkhttps://string-db.org/network/679935.Alfi_0490Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
Alfi_0491 protein networkhttps://string-db.org/network/679935.Alfi_0491Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
Alfi_0492 protein networkhttps://string-db.org/network/679935.Alfi_0492Hypothetical protein.
Alfi_0493 protein networkhttps://string-db.org/network/679935.Alfi_0493Hypothetical protein (Fib_succ_major); PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain.
Alfi_0494 protein networkhttps://string-db.org/network/679935.Alfi_0494Hypothetical protein.
Alfi_0495 protein networkhttps://string-db.org/network/679935.Alfi_0495Hypothetical protein.
Alfi_0496 protein networkhttps://string-db.org/network/679935.Alfi_0496Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_0497 protein networkhttps://string-db.org/network/679935.Alfi_0497Hypothetical protein.
Alfi_0498 protein networkhttps://string-db.org/network/679935.Alfi_0498ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
Alfi_0499 protein networkhttps://string-db.org/network/679935.Alfi_0499ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
Alfi_0500 protein networkhttps://string-db.org/network/679935.Alfi_0500ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
Alfi_0501 protein networkhttps://string-db.org/network/679935.Alfi_0501TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_0502 protein networkhttps://string-db.org/network/679935.Alfi_0502PFAM: Outer membrane efflux protein.
Alfi_0503 protein networkhttps://string-db.org/network/679935.Alfi_0503PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
Alfi_0504 protein networkhttps://string-db.org/network/679935.Alfi_0504PFAM: Mechanosensitive ion channel.
Alfi_0505 protein networkhttps://string-db.org/network/679935.Alfi_0505Isopentenyldiphosphate isomerase; PFAM: NUDIX domain.
Alfi_0506 protein networkhttps://string-db.org/network/679935.Alfi_0506Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
Alfi_0507 protein networkhttps://string-db.org/network/679935.Alfi_0507Hypothetical protein.
Alfi_0508 protein networkhttps://string-db.org/network/679935.Alfi_0508Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
Alfi_0509 protein networkhttps://string-db.org/network/679935.Alfi_0509Hypothetical protein.
Alfi_0510 protein networkhttps://string-db.org/network/679935.Alfi_0510Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
Alfi_0511 protein networkhttps://string-db.org/network/679935.Alfi_0511ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_0512 protein networkhttps://string-db.org/network/679935.Alfi_0512ParB-like partition protein; PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
Alfi_0513 protein networkhttps://string-db.org/network/679935.Alfi_0513Hypothetical protein.
Alfi_0514 protein networkhttps://string-db.org/network/679935.Alfi_0514Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain; LysM domain.
mnmE protein networkhttps://string-db.org/network/679935.Alfi_0515tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
Alfi_0516 protein networkhttps://string-db.org/network/679935.Alfi_0516Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0517 protein networkhttps://string-db.org/network/679935.Alfi_0517Hypothetical protein.
Alfi_0518 protein networkhttps://string-db.org/network/679935.Alfi_0518Hypothetical protein.
Alfi_0519 protein networkhttps://string-db.org/network/679935.Alfi_0519Hypothetical protein.
Alfi_0520 protein networkhttps://string-db.org/network/679935.Alfi_0520Hypothetical protein.
Alfi_0521 protein networkhttps://string-db.org/network/679935.Alfi_0521Hypothetical protein.
Alfi_0522 protein networkhttps://string-db.org/network/679935.Alfi_0522TIGRFAM: DNA binding domain, excisionase family.
Alfi_0523 protein networkhttps://string-db.org/network/679935.Alfi_0523Hypothetical protein.
Alfi_0524 protein networkhttps://string-db.org/network/679935.Alfi_0524Hypothetical protein.
Alfi_0525 protein networkhttps://string-db.org/network/679935.Alfi_0525Hypothetical protein.
Alfi_0526 protein networkhttps://string-db.org/network/679935.Alfi_0526PFAM: RecT family; TIGRFAM: recombinase, phage RecT family.
Alfi_0527 protein networkhttps://string-db.org/network/679935.Alfi_0527Putative hydrolase of the metallo-beta-lactamase superfamily; PFAM: Metallo-beta-lactamase superfamily.
Alfi_0528 protein networkhttps://string-db.org/network/679935.Alfi_0528Hypothetical protein.
Alfi_0529 protein networkhttps://string-db.org/network/679935.Alfi_0529Hypothetical protein.
Alfi_0530 protein networkhttps://string-db.org/network/679935.Alfi_0530Hypothetical protein.
Alfi_0531 protein networkhttps://string-db.org/network/679935.Alfi_0531Hypothetical protein.
Alfi_0532 protein networkhttps://string-db.org/network/679935.Alfi_0532PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
Alfi_0533 protein networkhttps://string-db.org/network/679935.Alfi_0533Hypothetical protein.
Alfi_0534 protein networkhttps://string-db.org/network/679935.Alfi_0534Hypothetical protein.
Alfi_0535 protein networkhttps://string-db.org/network/679935.Alfi_0535Hypothetical protein.
Alfi_0536 protein networkhttps://string-db.org/network/679935.Alfi_0536PFAM: Predicted periplasmic lipoprotein (DUF2279).
Alfi_0537 protein networkhttps://string-db.org/network/679935.Alfi_0537Hypothetical protein.
Alfi_0538 protein networkhttps://string-db.org/network/679935.Alfi_0538Hypothetical protein.
Alfi_0539 protein networkhttps://string-db.org/network/679935.Alfi_0539Hypothetical protein; PFAM: Restriction endonuclease.
Alfi_0540 protein networkhttps://string-db.org/network/679935.Alfi_0540Hypothetical protein.
Alfi_0541 protein networkhttps://string-db.org/network/679935.Alfi_0541TIGRFAM: DNA binding domain, excisionase family; manually curated.
Alfi_0542 protein networkhttps://string-db.org/network/679935.Alfi_0542Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0544 protein networkhttps://string-db.org/network/679935.Alfi_0544Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0545 protein networkhttps://string-db.org/network/679935.Alfi_0545Hypothetical protein.
Alfi_0546 protein networkhttps://string-db.org/network/679935.Alfi_0546TIGRFAM: DNA binding domain, excisionase family.
Alfi_0548 protein networkhttps://string-db.org/network/679935.Alfi_0548TIGRFAM: DNA binding domain, excisionase family.
Alfi_0549 protein networkhttps://string-db.org/network/679935.Alfi_0549Hypothetical protein; Manually curated.
Alfi_0550 protein networkhttps://string-db.org/network/679935.Alfi_0550Hypothetical protein.
Alfi_0551 protein networkhttps://string-db.org/network/679935.Alfi_0551Topoisomerase IA; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid.
Alfi_0553 protein networkhttps://string-db.org/network/679935.Alfi_0553Helicase family protein; PFAM: N-6 DNA Methylase; Helicase conserved C-terminal domain.
Alfi_0555 protein networkhttps://string-db.org/network/679935.Alfi_0555Small GTP-binding protein domain protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: sm [...]
Alfi_0556 protein networkhttps://string-db.org/network/679935.Alfi_0556PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
Alfi_0557 protein networkhttps://string-db.org/network/679935.Alfi_0557Hypothetical protein; Manually curated.
Alfi_0558 protein networkhttps://string-db.org/network/679935.Alfi_0558Hypothetical protein.
Alfi_0559 protein networkhttps://string-db.org/network/679935.Alfi_0559Hypothetical protein; Manually curated.
Alfi_0560 protein networkhttps://string-db.org/network/679935.Alfi_0560Hypothetical protein.
Alfi_0561 protein networkhttps://string-db.org/network/679935.Alfi_0561Hypothetical protein.
Alfi_0562 protein networkhttps://string-db.org/network/679935.Alfi_0562Hypothetical protein.
Alfi_0563 protein networkhttps://string-db.org/network/679935.Alfi_0563Hypothetical protein.
Alfi_0566 protein networkhttps://string-db.org/network/679935.Alfi_0566Hypothetical protein.
Alfi_0567 protein networkhttps://string-db.org/network/679935.Alfi_0567Hypothetical protein.
Alfi_0568 protein networkhttps://string-db.org/network/679935.Alfi_0568TIGRFAM: DNA binding domain, excisionase family.
Alfi_0569 protein networkhttps://string-db.org/network/679935.Alfi_0569Hypothetical protein.
Alfi_0570 protein networkhttps://string-db.org/network/679935.Alfi_0570Hypothetical protein.
Alfi_0571 protein networkhttps://string-db.org/network/679935.Alfi_0571Hypothetical protein.
Alfi_0572 protein networkhttps://string-db.org/network/679935.Alfi_0572Hypothetical protein.
Alfi_0574 protein networkhttps://string-db.org/network/679935.Alfi_0574Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0575 protein networkhttps://string-db.org/network/679935.Alfi_0575PFAM: Type I restriction modification DNA specificity domain.
Alfi_0576 protein networkhttps://string-db.org/network/679935.Alfi_0576PFAM: Type I restriction modification DNA specificity domain.
Alfi_0577 protein networkhttps://string-db.org/network/679935.Alfi_0577PFAM: Type I restriction modification DNA specificity domain.
Alfi_0578 protein networkhttps://string-db.org/network/679935.Alfi_0578PFAM: Transposase, Mutator family.
Alfi_0579 protein networkhttps://string-db.org/network/679935.Alfi_0579PFAM: Type I restriction modification DNA specificity domain.
Alfi_0580 protein networkhttps://string-db.org/network/679935.Alfi_0580Virulence protein.
Alfi_0581 protein networkhttps://string-db.org/network/679935.Alfi_0581PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
Alfi_0582 protein networkhttps://string-db.org/network/679935.Alfi_0582T5orf172 domain-containing protein; PFAM: T5orf172 domain.
Alfi_0583 protein networkhttps://string-db.org/network/679935.Alfi_0583Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
Alfi_0584 protein networkhttps://string-db.org/network/679935.Alfi_0584Plasmid maintenance system antidote protein; PFAM: Helix-turn-helix.
Alfi_0585 protein networkhttps://string-db.org/network/679935.Alfi_0585PFAM: Protein of unknown function (DUF2971).
Alfi_0586 protein networkhttps://string-db.org/network/679935.Alfi_0586Putative ATPase (AAA+ superfamily); PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function.
Alfi_0587 protein networkhttps://string-db.org/network/679935.Alfi_0587PFAM: Helix-turn-helix.
Alfi_0590 protein networkhttps://string-db.org/network/679935.Alfi_0590Putative membrane protein; PFAM: DoxX.
Alfi_0591 protein networkhttps://string-db.org/network/679935.Alfi_0591PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme.
Alfi_0592 protein networkhttps://string-db.org/network/679935.Alfi_0592Hypothetical protein.
Alfi_0593 protein networkhttps://string-db.org/network/679935.Alfi_0593Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_0594 protein networkhttps://string-db.org/network/679935.Alfi_0594Putative membrane protein; PFAM: SNARE associated Golgi protein.
Alfi_0595 protein networkhttps://string-db.org/network/679935.Alfi_0595PFAM: Acetyltransferase (GNAT) family.
Alfi_0596 protein networkhttps://string-db.org/network/679935.Alfi_0596PFAM: Phage protein Gp37/Gp68.
Alfi_0597 protein networkhttps://string-db.org/network/679935.Alfi_0597Ferritin-like protein; Iron-storage protein.
Alfi_0598 protein networkhttps://string-db.org/network/679935.Alfi_0598PFAM: Protein of unknown function (DUF2874).
Alfi_0599 protein networkhttps://string-db.org/network/679935.Alfi_0599PFAM: Protein of unknown function (DUF2874).
Alfi_0600 protein networkhttps://string-db.org/network/679935.Alfi_0600PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
Alfi_0601 protein networkhttps://string-db.org/network/679935.Alfi_0601PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
Alfi_0602 protein networkhttps://string-db.org/network/679935.Alfi_0602Hypothetical protein.
fabH protein networkhttps://string-db.org/network/679935.Alfi_06033-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
plsX protein networkhttps://string-db.org/network/679935.Alfi_0604Phosphate:acyl-(acyl carrier protein) acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-AC [...]
rpmF protein networkhttps://string-db.org/network/679935.Alfi_0605PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; manually curated; Belongs to the bacterial ribosomal protein bL32 family.
Alfi_0606 protein networkhttps://string-db.org/network/679935.Alfi_0606Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399.
Alfi_0607 protein networkhttps://string-db.org/network/679935.Alfi_0607Hypothetical protein.
Alfi_0608 protein networkhttps://string-db.org/network/679935.Alfi_0608PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs [...]
Alfi_0609 protein networkhttps://string-db.org/network/679935.Alfi_0609ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
Alfi_0610 protein networkhttps://string-db.org/network/679935.Alfi_0610ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
Alfi_0611 protein networkhttps://string-db.org/network/679935.Alfi_0611Hypothetical protein.
Alfi_0612 protein networkhttps://string-db.org/network/679935.Alfi_0612PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
Alfi_0614 protein networkhttps://string-db.org/network/679935.Alfi_0614PFAM: Amino acid permease; TIGRFAM: putative glutamate/gamma-aminobutyrate antiporter; manually curated.
Alfi_0615 protein networkhttps://string-db.org/network/679935.Alfi_0615PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0616 protein networkhttps://string-db.org/network/679935.Alfi_0616Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0617 protein networkhttps://string-db.org/network/679935.Alfi_0617TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0618 protein networkhttps://string-db.org/network/679935.Alfi_0618RagB/SusD family protein; PFAM: SusD family.
Alfi_0619 protein networkhttps://string-db.org/network/679935.Alfi_0619Hypothetical protein.
Alfi_0620 protein networkhttps://string-db.org/network/679935.Alfi_0620Hypothetical protein.
Alfi_0621 protein networkhttps://string-db.org/network/679935.Alfi_0621Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_0622 protein networkhttps://string-db.org/network/679935.Alfi_0622Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_0623 protein networkhttps://string-db.org/network/679935.Alfi_0623Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
Alfi_0624 protein networkhttps://string-db.org/network/679935.Alfi_0624Hypothetical protein.
Alfi_0625 protein networkhttps://string-db.org/network/679935.Alfi_0625Hypothetical protein.
Alfi_0626 protein networkhttps://string-db.org/network/679935.Alfi_0626PFAM: Outer membrane efflux protein.
Alfi_0627 protein networkhttps://string-db.org/network/679935.Alfi_0627Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell d [...]
Alfi_0628 protein networkhttps://string-db.org/network/679935.Alfi_0628TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_0629 protein networkhttps://string-db.org/network/679935.Alfi_0629PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0630 protein networkhttps://string-db.org/network/679935.Alfi_0630Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0631 protein networkhttps://string-db.org/network/679935.Alfi_0631TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0632 protein networkhttps://string-db.org/network/679935.Alfi_0632RagB/SusD family protein; PFAM: SusD family.
Alfi_0633 protein networkhttps://string-db.org/network/679935.Alfi_0633PFAM: Glycerophosphoryl diester phosphodiesterase family; PKD domain.
Alfi_0634 protein networkhttps://string-db.org/network/679935.Alfi_0634PDK repeat-containing protein; PFAM: PKD domain.
Alfi_0635 protein networkhttps://string-db.org/network/679935.Alfi_0635Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_0636 protein networkhttps://string-db.org/network/679935.Alfi_0636PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_0637 protein networkhttps://string-db.org/network/679935.Alfi_0637Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_0638 protein networkhttps://string-db.org/network/679935.Alfi_0638Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
Alfi_0639 protein networkhttps://string-db.org/network/679935.Alfi_0639OmpA-like transmembrane domain protein.
Alfi_0642 protein networkhttps://string-db.org/network/679935.Alfi_0642Hypothetical protein.
Alfi_0643 protein networkhttps://string-db.org/network/679935.Alfi_0643Hypothetical protein.
Alfi_0644 protein networkhttps://string-db.org/network/679935.Alfi_0644Hypothetical protein.
Alfi_0646 protein networkhttps://string-db.org/network/679935.Alfi_0646Transposase; Manually curated.
Alfi_0647 protein networkhttps://string-db.org/network/679935.Alfi_0647Hypothetical protein.
Alfi_0648 protein networkhttps://string-db.org/network/679935.Alfi_0648PFAM: Initiator Replication protein.
Alfi_0649 protein networkhttps://string-db.org/network/679935.Alfi_0649ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_0650 protein networkhttps://string-db.org/network/679935.Alfi_0650Hypothetical protein.
Alfi_0651 protein networkhttps://string-db.org/network/679935.Alfi_0651Hypothetical protein.
Alfi_0652 protein networkhttps://string-db.org/network/679935.Alfi_0652Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
Alfi_0653 protein networkhttps://string-db.org/network/679935.Alfi_0653PFAM: Protein of unknown function (DUF3575).
Alfi_0654 protein networkhttps://string-db.org/network/679935.Alfi_0654PFAM: Zinc finger found in FPG and IleRS; manually curated.
Alfi_0655 protein networkhttps://string-db.org/network/679935.Alfi_0655Hypothetical protein.
Alfi_0656 protein networkhttps://string-db.org/network/679935.Alfi_0656Hypothetical protein.
Alfi_0657 protein networkhttps://string-db.org/network/679935.Alfi_0657PFAM: Protein of unknown function (DUF1812).
Alfi_0658 protein networkhttps://string-db.org/network/679935.Alfi_0658Hypothetical protein.
Alfi_0660 protein networkhttps://string-db.org/network/679935.Alfi_0660Hypothetical protein.
Alfi_0661 protein networkhttps://string-db.org/network/679935.Alfi_0661Hypothetical protein.
Alfi_0662 protein networkhttps://string-db.org/network/679935.Alfi_0662Hypothetical protein.
Alfi_0663 protein networkhttps://string-db.org/network/679935.Alfi_0663Hypothetical protein.
Alfi_0665 protein networkhttps://string-db.org/network/679935.Alfi_0665Hypothetical protein.
Alfi_0666 protein networkhttps://string-db.org/network/679935.Alfi_0666Hypothetical protein; PFAM: Zeta toxin.
Alfi_0667 protein networkhttps://string-db.org/network/679935.Alfi_0667Putative ATPase (AAA+ superfamily); PFAM: Archaeal ATPase.
Alfi_0668 protein networkhttps://string-db.org/network/679935.Alfi_0668Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0669 protein networkhttps://string-db.org/network/679935.Alfi_0669Hypothetical protein.
Alfi_0670 protein networkhttps://string-db.org/network/679935.Alfi_0670TIGRFAM: DNA binding domain, excisionase family.
Alfi_0671 protein networkhttps://string-db.org/network/679935.Alfi_0671Hypothetical protein.
Alfi_0672 protein networkhttps://string-db.org/network/679935.Alfi_0672PFAM: Primase C terminal 2 (PriCT-2); VirE N-terminal domain.
Alfi_0673 protein networkhttps://string-db.org/network/679935.Alfi_0673Hypothetical protein.
Alfi_0674 protein networkhttps://string-db.org/network/679935.Alfi_0674Hypothetical protein.
Alfi_0675 protein networkhttps://string-db.org/network/679935.Alfi_0675Hypothetical protein.
Alfi_0676 protein networkhttps://string-db.org/network/679935.Alfi_0676Hypothetical protein.
Alfi_0677 protein networkhttps://string-db.org/network/679935.Alfi_0677Hypothetical protein; Manually curated.
Alfi_0679 protein networkhttps://string-db.org/network/679935.Alfi_0679Transposase; PFAM: Integrase core domain.
Alfi_0680 protein networkhttps://string-db.org/network/679935.Alfi_0680Hypothetical protein.
Alfi_0681 protein networkhttps://string-db.org/network/679935.Alfi_0681ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_0682 protein networkhttps://string-db.org/network/679935.Alfi_0682PFAM: Protein of unknown function (DUF3408).
Alfi_0683 protein networkhttps://string-db.org/network/679935.Alfi_0683PFAM: Protein of unknown function (DUF3408).
Alfi_0684 protein networkhttps://string-db.org/network/679935.Alfi_0684Hypothetical protein.
Alfi_0685 protein networkhttps://string-db.org/network/679935.Alfi_0685Hypothetical protein; Manually curated.
Alfi_0686 protein networkhttps://string-db.org/network/679935.Alfi_0686PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_0688 protein networkhttps://string-db.org/network/679935.Alfi_0688Hypothetical protein.
Alfi_0690 protein networkhttps://string-db.org/network/679935.Alfi_0690Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
Alfi_0692 protein networkhttps://string-db.org/network/679935.Alfi_0692PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_0695 protein networkhttps://string-db.org/network/679935.Alfi_0695Hypothetical protein.
Alfi_0696 protein networkhttps://string-db.org/network/679935.Alfi_0696Hypothetical protein.
Alfi_0697 protein networkhttps://string-db.org/network/679935.Alfi_0697Hypothetical protein.
Alfi_0698 protein networkhttps://string-db.org/network/679935.Alfi_0698Hypothetical protein.
Alfi_0699 protein networkhttps://string-db.org/network/679935.Alfi_0699PFAM: Homologues of TraJ from Bacteroides conjugative transposon; TIGRFAM: Bacteroides conjugative transposon TraJ protein.
Alfi_0700 protein networkhttps://string-db.org/network/679935.Alfi_0700PFAM: VirB8 protein; TIGRFAM: Bacteroides conjugative transposon TraK protein.
Alfi_0701 protein networkhttps://string-db.org/network/679935.Alfi_0701Hypothetical protein.
Alfi_0702 protein networkhttps://string-db.org/network/679935.Alfi_0702PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein.
Alfi_0703 protein networkhttps://string-db.org/network/679935.Alfi_0703TIGRFAM: Bacteroides conjugative transposon TraN protein.
Alfi_0704 protein networkhttps://string-db.org/network/679935.Alfi_0704Recombinational DNA repair ATPase (RecF pathway).
Alfi_0705 protein networkhttps://string-db.org/network/679935.Alfi_0705PFAM: Protein of unknown function DUF262.
Alfi_0707 protein networkhttps://string-db.org/network/679935.Alfi_0707Putative transcription factor, MBF1 like protein; PFAM: Helix-turn-helix.
Alfi_0708 protein networkhttps://string-db.org/network/679935.Alfi_0708PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_0709 protein networkhttps://string-db.org/network/679935.Alfi_0709Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
Alfi_0710 protein networkhttps://string-db.org/network/679935.Alfi_0710PFAM: Type I restriction modification DNA specificity domain.
Alfi_0711 protein networkhttps://string-db.org/network/679935.Alfi_0711PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
Alfi_0712 protein networkhttps://string-db.org/network/679935.Alfi_0712PFAM: Plasmid recombination enzyme.
Alfi_0713 protein networkhttps://string-db.org/network/679935.Alfi_0713Hypothetical protein.
Alfi_0714 protein networkhttps://string-db.org/network/679935.Alfi_0714Hypothetical protein.
Alfi_0715 protein networkhttps://string-db.org/network/679935.Alfi_0715Hypothetical protein.
Alfi_0716 protein networkhttps://string-db.org/network/679935.Alfi_0716Hypothetical protein.
Alfi_0718 protein networkhttps://string-db.org/network/679935.Alfi_0718PFAM: Protein of unknown function (DUF2795).
tal protein networkhttps://string-db.org/network/679935.Alfi_0719Fructose-6-phosphate aldolase, TalC/MipB family; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily [...]
Alfi_0720 protein networkhttps://string-db.org/network/679935.Alfi_0720PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
Alfi_0721 protein networkhttps://string-db.org/network/679935.Alfi_0721PFAM: Domain of unknown function (DUF1814).
Alfi_0722 protein networkhttps://string-db.org/network/679935.Alfi_0722Hypothetical protein.
Alfi_0723 protein networkhttps://string-db.org/network/679935.Alfi_0723Hypothetical protein.
Alfi_0724 protein networkhttps://string-db.org/network/679935.Alfi_0724Hypothetical protein.
Alfi_0725 protein networkhttps://string-db.org/network/679935.Alfi_0725Hypothetical protein.
Alfi_0726 protein networkhttps://string-db.org/network/679935.Alfi_0726Hypothetical protein.
Alfi_0727 protein networkhttps://string-db.org/network/679935.Alfi_0727Hypothetical protein.
Alfi_0728 protein networkhttps://string-db.org/network/679935.Alfi_0728Hypothetical protein.
Alfi_0729 protein networkhttps://string-db.org/network/679935.Alfi_0729Hypothetical protein; Manually curated.
Alfi_0730 protein networkhttps://string-db.org/network/679935.Alfi_0730Antirestriction protein; PFAM: Domain of unknown function (DUF1738).
Alfi_0731 protein networkhttps://string-db.org/network/679935.Alfi_0731Hypothetical protein.
Alfi_0732 protein networkhttps://string-db.org/network/679935.Alfi_0732ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
Alfi_0733 protein networkhttps://string-db.org/network/679935.Alfi_0733Hypothetical protein.
Alfi_0734 protein networkhttps://string-db.org/network/679935.Alfi_0734Hypothetical protein.
Alfi_0735 protein networkhttps://string-db.org/network/679935.Alfi_0735Hypothetical protein.
Alfi_0736 protein networkhttps://string-db.org/network/679935.Alfi_0736Hypothetical protein.
Alfi_0737 protein networkhttps://string-db.org/network/679935.Alfi_0737Hypothetical protein.
Alfi_0738 protein networkhttps://string-db.org/network/679935.Alfi_0738Hypothetical protein.
Alfi_0739 protein networkhttps://string-db.org/network/679935.Alfi_0739Hypothetical protein.
Alfi_0740 protein networkhttps://string-db.org/network/679935.Alfi_0740Hypothetical protein.
Alfi_0741 protein networkhttps://string-db.org/network/679935.Alfi_0741Hypothetical protein.
Alfi_0742 protein networkhttps://string-db.org/network/679935.Alfi_0742Hypothetical protein.
Alfi_0743 protein networkhttps://string-db.org/network/679935.Alfi_0743Hypothetical protein.
Alfi_0744 protein networkhttps://string-db.org/network/679935.Alfi_0744Hypothetical protein.
Alfi_0745 protein networkhttps://string-db.org/network/679935.Alfi_0745Hypothetical protein.
Alfi_0746 protein networkhttps://string-db.org/network/679935.Alfi_0746Hypothetical protein.
Alfi_0747 protein networkhttps://string-db.org/network/679935.Alfi_0747Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0749 protein networkhttps://string-db.org/network/679935.Alfi_0749Hypothetical protein.
Alfi_0750 protein networkhttps://string-db.org/network/679935.Alfi_0750Hypothetical protein.
Alfi_0751 protein networkhttps://string-db.org/network/679935.Alfi_0751Hypothetical protein.
Alfi_0753 protein networkhttps://string-db.org/network/679935.Alfi_0753Hypothetical protein.
Alfi_0754 protein networkhttps://string-db.org/network/679935.Alfi_0754Hypothetical protein.
Alfi_0755 protein networkhttps://string-db.org/network/679935.Alfi_0755Hypothetical protein.
Alfi_0756 protein networkhttps://string-db.org/network/679935.Alfi_0756Putative flavoprotein; PFAM: ORF6N domain.
Alfi_0757 protein networkhttps://string-db.org/network/679935.Alfi_0757Hypothetical protein.
Alfi_0758 protein networkhttps://string-db.org/network/679935.Alfi_0758Hypothetical protein.
Alfi_0759 protein networkhttps://string-db.org/network/679935.Alfi_0759Hypothetical protein; Manually curated.
Alfi_0761 protein networkhttps://string-db.org/network/679935.Alfi_0761Hypothetical protein.
Alfi_0762 protein networkhttps://string-db.org/network/679935.Alfi_0762Hypothetical protein.
Alfi_0763 protein networkhttps://string-db.org/network/679935.Alfi_0763Hypothetical protein.
Alfi_0764 protein networkhttps://string-db.org/network/679935.Alfi_0764Hypothetical protein.
Alfi_0765 protein networkhttps://string-db.org/network/679935.Alfi_0765Microcystin-dependent protein; PFAM: Phage Tail Collar Domain.
Alfi_0766 protein networkhttps://string-db.org/network/679935.Alfi_0766Hypothetical protein.
Alfi_0767 protein networkhttps://string-db.org/network/679935.Alfi_0767Hypothetical protein.
Alfi_0768 protein networkhttps://string-db.org/network/679935.Alfi_0768Hypothetical protein.
Alfi_0769 protein networkhttps://string-db.org/network/679935.Alfi_0769Hypothetical protein.
Alfi_0770 protein networkhttps://string-db.org/network/679935.Alfi_0770Hypothetical protein.
Alfi_0771 protein networkhttps://string-db.org/network/679935.Alfi_0771Hypothetical protein.
Alfi_0772 protein networkhttps://string-db.org/network/679935.Alfi_0772Hypothetical protein.
Alfi_0773 protein networkhttps://string-db.org/network/679935.Alfi_0773PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
Alfi_0774 protein networkhttps://string-db.org/network/679935.Alfi_0774Hypothetical protein.
Alfi_0775 protein networkhttps://string-db.org/network/679935.Alfi_0775Hypothetical protein.
Alfi_0776 protein networkhttps://string-db.org/network/679935.Alfi_0776PFAM: Protein of unknown function (DUF2586).
Alfi_0777 protein networkhttps://string-db.org/network/679935.Alfi_0777Hypothetical protein.
Alfi_0778 protein networkhttps://string-db.org/network/679935.Alfi_0778Hypothetical protein; Manually curated.
Alfi_0779 protein networkhttps://string-db.org/network/679935.Alfi_0779PFAM: N-acetylmuramoyl-L-alanine amidase.
Alfi_0780 protein networkhttps://string-db.org/network/679935.Alfi_0780Hypothetical protein.
Alfi_0781 protein networkhttps://string-db.org/network/679935.Alfi_0781PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
Alfi_0783 protein networkhttps://string-db.org/network/679935.Alfi_0783Hypothetical protein; PFAM: Putative ATPase subunit of terminase (gpP-like).
Alfi_0784 protein networkhttps://string-db.org/network/679935.Alfi_0784TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
Alfi_0785 protein networkhttps://string-db.org/network/679935.Alfi_0785Hypothetical protein.
Alfi_0786 protein networkhttps://string-db.org/network/679935.Alfi_0786Mu-like prophage protein gp36; PFAM: Protein of unknown function (DUF1320).
Alfi_0787 protein networkhttps://string-db.org/network/679935.Alfi_0787Mu-like prophage protein gp29; PFAM: Protein of unknown function (DUF935).
Alfi_0788 protein networkhttps://string-db.org/network/679935.Alfi_0788PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
Alfi_0789 protein networkhttps://string-db.org/network/679935.Alfi_0789Hypothetical protein.
Alfi_0790 protein networkhttps://string-db.org/network/679935.Alfi_0790Mu-like prophage protein gpG; PFAM: Phage virion morphogenesis family; manually curated.
Alfi_0791 protein networkhttps://string-db.org/network/679935.Alfi_0791Hypothetical protein.
Alfi_0792 protein networkhttps://string-db.org/network/679935.Alfi_0792Hypothetical protein.
Alfi_0793 protein networkhttps://string-db.org/network/679935.Alfi_0793Hypothetical protein; Manually curated.
Alfi_0794 protein networkhttps://string-db.org/network/679935.Alfi_0794Mu-like prophage host-nuclease inhibitor protein Gam; PFAM: Bacteriophage Mu Gam like protein.
Alfi_0795 protein networkhttps://string-db.org/network/679935.Alfi_0795Hypothetical protein.
Alfi_0796 protein networkhttps://string-db.org/network/679935.Alfi_0796Hypothetical protein.
Alfi_0797 protein networkhttps://string-db.org/network/679935.Alfi_0797Hypothetical protein.
Alfi_0798 protein networkhttps://string-db.org/network/679935.Alfi_0798Hypothetical protein.
Alfi_0799 protein networkhttps://string-db.org/network/679935.Alfi_0799Putative ATP-dependent serine protease; PFAM: ATPase family associated with various cellular activities (AAA).
Alfi_0800 protein networkhttps://string-db.org/network/679935.Alfi_0800PFAM: ATPase family associated with various cellular activities (AAA).
Alfi_0801 protein networkhttps://string-db.org/network/679935.Alfi_0801Hypothetical protein.
Alfi_0803 protein networkhttps://string-db.org/network/679935.Alfi_0803Hypothetical protein.
Alfi_0804 protein networkhttps://string-db.org/network/679935.Alfi_0804Hypothetical protein.
Alfi_0805 protein networkhttps://string-db.org/network/679935.Alfi_0805Hypothetical protein.
Alfi_0806 protein networkhttps://string-db.org/network/679935.Alfi_0806Hypothetical protein.
Alfi_0807 protein networkhttps://string-db.org/network/679935.Alfi_0807Putative transcriptional regulator; Belongs to the peptidase S24 family.
Alfi_0808 protein networkhttps://string-db.org/network/679935.Alfi_0808Hypothetical protein.
Alfi_0809 protein networkhttps://string-db.org/network/679935.Alfi_0809Hypothetical protein.
Alfi_0810 protein networkhttps://string-db.org/network/679935.Alfi_0810Hypothetical protein.
Alfi_0811 protein networkhttps://string-db.org/network/679935.Alfi_0811Hypothetical protein.
Alfi_0812 protein networkhttps://string-db.org/network/679935.Alfi_0812PFAM: Conjugal transfer protein.
Alfi_0813 protein networkhttps://string-db.org/network/679935.Alfi_0813PFAM: Protein of unknown function (DUF3714).
Alfi_0814 protein networkhttps://string-db.org/network/679935.Alfi_0814Hypothetical protein.
Alfi_0815 protein networkhttps://string-db.org/network/679935.Alfi_0815Hypothetical protein.
Alfi_0816 protein networkhttps://string-db.org/network/679935.Alfi_0816Hypothetical protein.
Alfi_0817 protein networkhttps://string-db.org/network/679935.Alfi_0817Hypothetical protein.
Alfi_0818 protein networkhttps://string-db.org/network/679935.Alfi_0818PFAM: Type IV secretory pathway, VirB3-like protein.
Alfi_0819 protein networkhttps://string-db.org/network/679935.Alfi_0819Hypothetical protein.
Alfi_0820 protein networkhttps://string-db.org/network/679935.Alfi_0820Type IV secretory pathway, VirD4 component.
Alfi_0821 protein networkhttps://string-db.org/network/679935.Alfi_0821Hypothetical protein.
Alfi_0822 protein networkhttps://string-db.org/network/679935.Alfi_0822Hypothetical protein.
Alfi_0823 protein networkhttps://string-db.org/network/679935.Alfi_0823Hypothetical protein.
Alfi_0824 protein networkhttps://string-db.org/network/679935.Alfi_0824Hypothetical protein.
Alfi_0825 protein networkhttps://string-db.org/network/679935.Alfi_0825Hypothetical protein.
Alfi_0826 protein networkhttps://string-db.org/network/679935.Alfi_0826Transposase; PFAM: Integrase core domain; manually curated.
Alfi_0827 protein networkhttps://string-db.org/network/679935.Alfi_0827Transposase; Manually curated.
Alfi_0828 protein networkhttps://string-db.org/network/679935.Alfi_0828Hypothetical protein.
Alfi_0829 protein networkhttps://string-db.org/network/679935.Alfi_0829PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
Alfi_0830 protein networkhttps://string-db.org/network/679935.Alfi_0830Hypothetical protein.
Alfi_0831 protein networkhttps://string-db.org/network/679935.Alfi_0831Hypothetical protein.
Alfi_0832 protein networkhttps://string-db.org/network/679935.Alfi_0832Hypothetical protein.
Alfi_0833 protein networkhttps://string-db.org/network/679935.Alfi_0833Hypothetical protein.
Alfi_0834 protein networkhttps://string-db.org/network/679935.Alfi_0834Hypothetical protein.
Alfi_0835 protein networkhttps://string-db.org/network/679935.Alfi_0835Hypothetical protein.
Alfi_0841 protein networkhttps://string-db.org/network/679935.Alfi_0841Hypothetical protein.
Alfi_0842 protein networkhttps://string-db.org/network/679935.Alfi_0842Hypothetical protein.
Alfi_0843 protein networkhttps://string-db.org/network/679935.Alfi_0843PFAM: Protein of unknown function (DUF2693).
Alfi_0845 protein networkhttps://string-db.org/network/679935.Alfi_0845Hypothetical protein; Belongs to the 'phage' integrase family.
Alfi_0848 protein networkhttps://string-db.org/network/679935.Alfi_0848Hypothetical protein.
Alfi_0849 protein networkhttps://string-db.org/network/679935.Alfi_0849Hypothetical protein.
Alfi_0850 protein networkhttps://string-db.org/network/679935.Alfi_0850PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262.
Alfi_0851 protein networkhttps://string-db.org/network/679935.Alfi_0851Hypothetical protein.
Alfi_0852 protein networkhttps://string-db.org/network/679935.Alfi_0852Hypothetical protein.
Alfi_0853 protein networkhttps://string-db.org/network/679935.Alfi_0853Hypothetical protein.
Alfi_0854 protein networkhttps://string-db.org/network/679935.Alfi_0854Hypothetical protein.
Alfi_0856 protein networkhttps://string-db.org/network/679935.Alfi_0856Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0859 protein networkhttps://string-db.org/network/679935.Alfi_0859PFAM: Protein of unknown function (DUF1573).
Alfi_0860 protein networkhttps://string-db.org/network/679935.Alfi_08602-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain.
Alfi_0861 protein networkhttps://string-db.org/network/679935.Alfi_0861NADPH-dependent glutamate synthase, homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric.
Alfi_0862 protein networkhttps://string-db.org/network/679935.Alfi_0862Hypothetical protein.
Alfi_0863 protein networkhttps://string-db.org/network/679935.Alfi_0863PFAM: Predicted periplasmic protein (DUF2233).
Alfi_0864 protein networkhttps://string-db.org/network/679935.Alfi_0864PFAM: Glycosyltransferase family 9 (heptosyltransferase).
Alfi_0865 protein networkhttps://string-db.org/network/679935.Alfi_0865Hypothetical protein.
Alfi_0866 protein networkhttps://string-db.org/network/679935.Alfi_0866Muramidase (flagellum-specific); PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain.
Alfi_0867 protein networkhttps://string-db.org/network/679935.Alfi_0867Hypothetical protein.
Alfi_0868 protein networkhttps://string-db.org/network/679935.Alfi_0868PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
Alfi_0869 protein networkhttps://string-db.org/network/679935.Alfi_0869O-6-methylguanine DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated [...]
nuoN protein networkhttps://string-db.org/network/679935.Alfi_0870NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
Alfi_0871 protein networkhttps://string-db.org/network/679935.Alfi_0871PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
Alfi_0872 protein networkhttps://string-db.org/network/679935.Alfi_0872Proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM [...]
nuoK protein networkhttps://string-db.org/network/679935.Alfi_0873NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron [...]
Alfi_0874 protein networkhttps://string-db.org/network/679935.Alfi_0874NADH:ubiquinone oxidoreductase subunit 6 (chain J); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to [...]
Alfi_0875 protein networkhttps://string-db.org/network/679935.Alfi_0875NADH:ubiquinone oxidoreductase chain I-like protein; TIGRFAM: NADH-quinone oxidoreductase, chain I.
nuoH protein networkhttps://string-db.org/network/679935.Alfi_0876NADH:ubiquinone oxidoreductase subunit 1 (chain H); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron accept [...]
nuoD protein networkhttps://string-db.org/network/679935.Alfi_0877NADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor f [...]
nuoB protein networkhttps://string-db.org/network/679935.Alfi_0878NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the e [...]
nuoA protein networkhttps://string-db.org/network/679935.Alfi_0879NADH:ubiquinone oxidoreductase subunit 3 (chain A); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron accept [...]
Alfi_0880 protein networkhttps://string-db.org/network/679935.Alfi_0880Hypothetical protein.
Alfi_0881 protein networkhttps://string-db.org/network/679935.Alfi_0881PFAM: F5/8 type C domain.
Alfi_0882 protein networkhttps://string-db.org/network/679935.Alfi_0882PFAM: Domain of unknown function (DUF1735); Glycosyl hydrolases family 18.
Alfi_0883 protein networkhttps://string-db.org/network/679935.Alfi_0883PFAM: Domain of unknown function (DUF1735); Pentaxin family.
Alfi_0884 protein networkhttps://string-db.org/network/679935.Alfi_0884Hypothetical protein.
Alfi_0885 protein networkhttps://string-db.org/network/679935.Alfi_0885Hypothetical protein.
Alfi_0886 protein networkhttps://string-db.org/network/679935.Alfi_0886TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0887 protein networkhttps://string-db.org/network/679935.Alfi_0887Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0888 protein networkhttps://string-db.org/network/679935.Alfi_0888PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_0889 protein networkhttps://string-db.org/network/679935.Alfi_0889Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
Alfi_0890 protein networkhttps://string-db.org/network/679935.Alfi_0890PFAM: Rubredoxin.
Alfi_0891 protein networkhttps://string-db.org/network/679935.Alfi_0891Tryptophanase; PFAM: Beta-eliminating lyase.
Alfi_0892 protein networkhttps://string-db.org/network/679935.Alfi_0892PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: N-acetylneuraminate lyase; Belongs to the DapA family.
Alfi_0893 protein networkhttps://string-db.org/network/679935.Alfi_0893Hypothetical protein.
Alfi_0894 protein networkhttps://string-db.org/network/679935.Alfi_0894PFAM: Glycosyl hydrolases family 18.
Alfi_0895 protein networkhttps://string-db.org/network/679935.Alfi_0895PFAM: Glycosyl hydrolases family 18.
Alfi_0896 protein networkhttps://string-db.org/network/679935.Alfi_0896PFAM: Domain of unknown function (DUF1735).
Alfi_0897 protein networkhttps://string-db.org/network/679935.Alfi_0897Hypothetical protein.
Alfi_0898 protein networkhttps://string-db.org/network/679935.Alfi_0898Hypothetical protein.
Alfi_0899 protein networkhttps://string-db.org/network/679935.Alfi_0899TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_0900 protein networkhttps://string-db.org/network/679935.Alfi_0900Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_0901 protein networkhttps://string-db.org/network/679935.Alfi_0901PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
asd protein networkhttps://string-db.org/network/679935.Alfi_0902Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
Alfi_0903 protein networkhttps://string-db.org/network/679935.Alfi_0903Membrane carboxypeptidase/penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
Alfi_0904 protein networkhttps://string-db.org/network/679935.Alfi_0904Hypothetical protein.
Alfi_0905 protein networkhttps://string-db.org/network/679935.Alfi_0905PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; manually curated.
Alfi_0906 protein networkhttps://string-db.org/network/679935.Alfi_0906Hypothetical protein.
Alfi_0907 protein networkhttps://string-db.org/network/679935.Alfi_0907PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
Alfi_0908 protein networkhttps://string-db.org/network/679935.Alfi_0908Hypothetical protein.
Alfi_0909 protein networkhttps://string-db.org/network/679935.Alfi_0909Serine protease, S9A family peptidase; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family.
Alfi_0910 protein networkhttps://string-db.org/network/679935.Alfi_0910Tetrahydrodipicolinate N-succinyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the [...]
Alfi_0911 protein networkhttps://string-db.org/network/679935.Alfi_0911PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region.
Alfi_0912 protein networkhttps://string-db.org/network/679935.Alfi_0912Hypothetical protein.
Alfi_0913 protein networkhttps://string-db.org/network/679935.Alfi_0913Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
Alfi_0914 protein networkhttps://string-db.org/network/679935.Alfi_0914Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehyd [...]
Alfi_0916 protein networkhttps://string-db.org/network/679935.Alfi_0916Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0917 protein networkhttps://string-db.org/network/679935.Alfi_0917PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_0921 protein networkhttps://string-db.org/network/679935.Alfi_0921PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Two component regulator propeller; His Kinase A (phosphoacceptor) domain.
Alfi_0922 protein networkhttps://string-db.org/network/679935.Alfi_0922Hypothetical protein.
Alfi_0923 protein networkhttps://string-db.org/network/679935.Alfi_0923TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_0924 protein networkhttps://string-db.org/network/679935.Alfi_0924RagB/SusD family protein; PFAM: SusD family.
Alfi_0925 protein networkhttps://string-db.org/network/679935.Alfi_0925Hypothetical protein.
Alfi_0926 protein networkhttps://string-db.org/network/679935.Alfi_0926Hypothetical protein.
Alfi_0927 protein networkhttps://string-db.org/network/679935.Alfi_0927Hypothetical protein.
Alfi_0928 protein networkhttps://string-db.org/network/679935.Alfi_0928Putative lysophospholipase.
Alfi_0929 protein networkhttps://string-db.org/network/679935.Alfi_0929Hypothetical protein.
Alfi_0930 protein networkhttps://string-db.org/network/679935.Alfi_0930Hypothetical protein.
Alfi_0933 protein networkhttps://string-db.org/network/679935.Alfi_0933Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
gcvH protein networkhttps://string-db.org/network/679935.Alfi_0935Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
mdh protein networkhttps://string-db.org/network/679935.Alfi_0936Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
Alfi_0937 protein networkhttps://string-db.org/network/679935.Alfi_0937Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_0938 protein networkhttps://string-db.org/network/679935.Alfi_0938Hypothetical protein.
greA protein networkhttps://string-db.org/network/679935.Alfi_0939Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
Alfi_0940 protein networkhttps://string-db.org/network/679935.Alfi_0940Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin ( [...]
Alfi_0941 protein networkhttps://string-db.org/network/679935.Alfi_0941Hypothetical protein.
Alfi_0942 protein networkhttps://string-db.org/network/679935.Alfi_0942Beta-barrel assembly machine subunit BamD; TIGRFAM: outer membrane assembly lipoprotein YfiO.
Alfi_0943 protein networkhttps://string-db.org/network/679935.Alfi_0943Hypothetical protein.
Alfi_0944 protein networkhttps://string-db.org/network/679935.Alfi_0944Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantot [...]
Alfi_0945 protein networkhttps://string-db.org/network/679935.Alfi_0945DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
Alfi_0946 protein networkhttps://string-db.org/network/679935.Alfi_0946Hypothetical protein.
groL protein networkhttps://string-db.org/network/679935.Alfi_0947Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
groS protein networkhttps://string-db.org/network/679935.Alfi_0948Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
Alfi_0950 protein networkhttps://string-db.org/network/679935.Alfi_0950Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_0951 protein networkhttps://string-db.org/network/679935.Alfi_0951Hypothetical protein.
Alfi_0952 protein networkhttps://string-db.org/network/679935.Alfi_0952Hypothetical protein.
Alfi_0953 protein networkhttps://string-db.org/network/679935.Alfi_0953Putative ATPase (AAA+ superfamily); PFAM: Archaeal ATPase.
Alfi_0954 protein networkhttps://string-db.org/network/679935.Alfi_0954Hypothetical protein.
Alfi_0955 protein networkhttps://string-db.org/network/679935.Alfi_0955Hypothetical protein.
Alfi_0956 protein networkhttps://string-db.org/network/679935.Alfi_0956PFAM: OmpA family.
Alfi_0957 protein networkhttps://string-db.org/network/679935.Alfi_0957PFAM: Protein of unknown function (DUF3575).
Alfi_0958 protein networkhttps://string-db.org/network/679935.Alfi_0958Hypothetical protein.
Alfi_0959 protein networkhttps://string-db.org/network/679935.Alfi_0959PFAM: Protein of unknown function (DUF1812).
Alfi_0960 protein networkhttps://string-db.org/network/679935.Alfi_0960PFAM: Domain of unknown function (DUF1896).
Alfi_0961 protein networkhttps://string-db.org/network/679935.Alfi_0961Hypothetical protein.
Alfi_0962 protein networkhttps://string-db.org/network/679935.Alfi_0962Hypothetical protein; PFAM: Fic/DOC family.
Alfi_0963 protein networkhttps://string-db.org/network/679935.Alfi_0963PFAM: Histone H1-like protein Hc1.
Alfi_0964 protein networkhttps://string-db.org/network/679935.Alfi_0964Type IV secretory pathway, VirD4 component.
Alfi_0965 protein networkhttps://string-db.org/network/679935.Alfi_0965Hypothetical protein.
Alfi_0966 protein networkhttps://string-db.org/network/679935.Alfi_0966Transposase; PFAM: Integrase core domain.
Alfi_0968 protein networkhttps://string-db.org/network/679935.Alfi_0968Hypothetical protein.
Alfi_0969 protein networkhttps://string-db.org/network/679935.Alfi_0969Hypothetical protein.
Alfi_0970 protein networkhttps://string-db.org/network/679935.Alfi_0970Putative membrane protein; PFAM: Protein of unknown function (DUF805).
Alfi_0971 protein networkhttps://string-db.org/network/679935.Alfi_0971PFAM: Protein of unknown function (DUF2874).
Alfi_0972 protein networkhttps://string-db.org/network/679935.Alfi_0972PFAM: Protein of unknown function (DUF2874).
Alfi_0973 protein networkhttps://string-db.org/network/679935.Alfi_0973Hypothetical protein.
Alfi_0974 protein networkhttps://string-db.org/network/679935.Alfi_0974PFAM: Protein of unknown function (DUF2874).
Alfi_0975 protein networkhttps://string-db.org/network/679935.Alfi_0975Hypothetical protein.
Alfi_0976 protein networkhttps://string-db.org/network/679935.Alfi_0976Hypothetical protein.
Alfi_0977 protein networkhttps://string-db.org/network/679935.Alfi_0977PFAM: Protein of unknown function (DUF2874).
Alfi_0978 protein networkhttps://string-db.org/network/679935.Alfi_0978PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
Alfi_0979 protein networkhttps://string-db.org/network/679935.Alfi_0979PFAM: S23 ribosomal protein.
Alfi_0980 protein networkhttps://string-db.org/network/679935.Alfi_0980Hypothetical protein.
Alfi_0981 protein networkhttps://string-db.org/network/679935.Alfi_0981Hypothetical protein.
Alfi_0982 protein networkhttps://string-db.org/network/679935.Alfi_0982Hypothetical protein.
Alfi_0983 protein networkhttps://string-db.org/network/679935.Alfi_0983PFAM: Protein of unknown function (DUF1812).
Alfi_0984 protein networkhttps://string-db.org/network/679935.Alfi_0984Hypothetical protein; PFAM: Porphyromonas gingivalis major fimbrial subunit protein (FimA).
Alfi_0985 protein networkhttps://string-db.org/network/679935.Alfi_0985Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: Protein of unknown function (DUF3575); OmpA family.
Alfi_0987 protein networkhttps://string-db.org/network/679935.Alfi_0987Hypothetical protein.
Alfi_0988 protein networkhttps://string-db.org/network/679935.Alfi_0988PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
Alfi_0990 protein networkhttps://string-db.org/network/679935.Alfi_0990PFAM: Relaxase/Mobilisation nuclease domain.
Alfi_0991 protein networkhttps://string-db.org/network/679935.Alfi_0991Hypothetical protein.
Alfi_0992 protein networkhttps://string-db.org/network/679935.Alfi_0992ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_0993 protein networkhttps://string-db.org/network/679935.Alfi_0993PFAM: Protein of unknown function (DUF3408).
Alfi_0994 protein networkhttps://string-db.org/network/679935.Alfi_0994PFAM: Protein of unknown function (DUF3408).
Alfi_0995 protein networkhttps://string-db.org/network/679935.Alfi_0995Hypothetical protein.
Alfi_0996 protein networkhttps://string-db.org/network/679935.Alfi_0996Hypothetical protein; Manually curated.
Alfi_0997 protein networkhttps://string-db.org/network/679935.Alfi_0997PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_0999 protein networkhttps://string-db.org/network/679935.Alfi_0999Hypothetical protein.
Alfi_1003 protein networkhttps://string-db.org/network/679935.Alfi_1003Hypothetical protein.
Alfi_1004 protein networkhttps://string-db.org/network/679935.Alfi_1004Hypothetical protein.
Alfi_1005 protein networkhttps://string-db.org/network/679935.Alfi_1005Hypothetical protein.
Alfi_1006 protein networkhttps://string-db.org/network/679935.Alfi_1006Hypothetical protein.
Alfi_1007 protein networkhttps://string-db.org/network/679935.Alfi_1007PFAM: Homologues of TraJ from Bacteroides conjugative transposon; TIGRFAM: Bacteroides conjugative transposon TraJ protein.
Alfi_1008 protein networkhttps://string-db.org/network/679935.Alfi_1008PFAM: VirB8 protein; TIGRFAM: Bacteroides conjugative transposon TraK protein.
Alfi_1009 protein networkhttps://string-db.org/network/679935.Alfi_1009PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein.
Alfi_1010 protein networkhttps://string-db.org/network/679935.Alfi_1010TIGRFAM: Bacteroides conjugative transposon TraN protein.
Alfi_1011 protein networkhttps://string-db.org/network/679935.Alfi_1011Hypothetical protein.
Alfi_1012 protein networkhttps://string-db.org/network/679935.Alfi_1012Hypothetical protein.
Alfi_1013 protein networkhttps://string-db.org/network/679935.Alfi_1013PFAM: Domain of unknown function (DUF3440); Phosphoadenosine phosphosulfate reductase family.
Alfi_1014 protein networkhttps://string-db.org/network/679935.Alfi_1014Putative transcriptional regulator; PFAM: ParB-like nuclease domain.
Alfi_1017 protein networkhttps://string-db.org/network/679935.Alfi_1017Hypothetical protein.
Alfi_1018 protein networkhttps://string-db.org/network/679935.Alfi_1018Hypothetical protein.
Alfi_1019 protein networkhttps://string-db.org/network/679935.Alfi_1019Hypothetical protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
Alfi_1020 protein networkhttps://string-db.org/network/679935.Alfi_1020nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif.
Alfi_1021 protein networkhttps://string-db.org/network/679935.Alfi_1021SOS response transcriptional repressor, RecA-mediated autopeptidase; Belongs to the peptidase S24 family.
Alfi_1022 protein networkhttps://string-db.org/network/679935.Alfi_1022PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Alfi_1023 protein networkhttps://string-db.org/network/679935.Alfi_1023PFAM: Protein of unknown function (DUF1016).
Alfi_1025 protein networkhttps://string-db.org/network/679935.Alfi_1025PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
Alfi_1026 protein networkhttps://string-db.org/network/679935.Alfi_1026Hypothetical protein.
Alfi_1027 protein networkhttps://string-db.org/network/679935.Alfi_1027Hypothetical protein.
Alfi_1028 protein networkhttps://string-db.org/network/679935.Alfi_1028Hypothetical protein; Manually curated.
Alfi_1029 protein networkhttps://string-db.org/network/679935.Alfi_1029Antirestriction protein; PFAM: Domain of unknown function (DUF1738).
Alfi_1030 protein networkhttps://string-db.org/network/679935.Alfi_1030Hypothetical protein; Manually curated.
Alfi_1031 protein networkhttps://string-db.org/network/679935.Alfi_1031ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
Alfi_1032 protein networkhttps://string-db.org/network/679935.Alfi_1032Hypothetical protein.
Alfi_1033 protein networkhttps://string-db.org/network/679935.Alfi_1033Hypothetical protein.
Alfi_1034 protein networkhttps://string-db.org/network/679935.Alfi_1034Hypothetical protein.
Alfi_1035 protein networkhttps://string-db.org/network/679935.Alfi_1035PFAM: Histone H1-like protein Hc1.
Alfi_1036 protein networkhttps://string-db.org/network/679935.Alfi_1036Hypothetical protein.
Alfi_1037 protein networkhttps://string-db.org/network/679935.Alfi_1037Hypothetical protein.
Alfi_1039 protein networkhttps://string-db.org/network/679935.Alfi_1039Hypothetical protein.
Alfi_1040 protein networkhttps://string-db.org/network/679935.Alfi_1040Hypothetical protein.
Alfi_1041 protein networkhttps://string-db.org/network/679935.Alfi_1041Hypothetical protein.
Alfi_1042 protein networkhttps://string-db.org/network/679935.Alfi_1042Hypothetical protein.
Alfi_1043 protein networkhttps://string-db.org/network/679935.Alfi_1043Hypothetical protein.
Alfi_1044 protein networkhttps://string-db.org/network/679935.Alfi_1044Hypothetical protein.
Alfi_1045 protein networkhttps://string-db.org/network/679935.Alfi_1045Hypothetical protein.
Alfi_1046 protein networkhttps://string-db.org/network/679935.Alfi_1046Hypothetical protein.
Alfi_1047 protein networkhttps://string-db.org/network/679935.Alfi_1047Hypothetical protein.
Alfi_1048 protein networkhttps://string-db.org/network/679935.Alfi_1048Hypothetical protein.
Alfi_1049 protein networkhttps://string-db.org/network/679935.Alfi_1049Hypothetical protein; Manually curated.
Alfi_1050 protein networkhttps://string-db.org/network/679935.Alfi_1050PFAM: Inosine-uridine preferring nucleoside hydrolase; FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
Alfi_1051 protein networkhttps://string-db.org/network/679935.Alfi_1051Outer membrane cobalamin receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
Alfi_1052 protein networkhttps://string-db.org/network/679935.Alfi_1052Putative membrane protein; PFAM: Bacterial protein of unknown function (DUF939); Sugar (and other) transporter.
Alfi_1053 protein networkhttps://string-db.org/network/679935.Alfi_1053ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.
Alfi_1054 protein networkhttps://string-db.org/network/679935.Alfi_1054PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
Alfi_1055 protein networkhttps://string-db.org/network/679935.Alfi_1055ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.
Alfi_1056 protein networkhttps://string-db.org/network/679935.Alfi_1056PFAM: Urea transporter; TIGRFAM: urea transporter, Yersinia type.
ureD protein networkhttps://string-db.org/network/679935.Alfi_1057Urease accessory protein UreH; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
ureG protein networkhttps://string-db.org/network/679935.Alfi_1058Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
ureF protein networkhttps://string-db.org/network/679935.Alfi_1059Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
Alfi_1060 protein networkhttps://string-db.org/network/679935.Alfi_1060PFAM: UreE urease accessory protein, C-terminal domain; UreE urease accessory protein, N-terminal domain.
ureC protein networkhttps://string-db.org/network/679935.Alfi_1061PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit.
ureB protein networkhttps://string-db.org/network/679935.Alfi_1062PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit; Belongs to the urease beta subunit family.
Alfi_1063 protein networkhttps://string-db.org/network/679935.Alfi_1063PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit; Belongs to the urease gamma subunit family.
crcB-2 protein networkhttps://string-db.org/network/679935.Alfi_1064crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
eno protein networkhttps://string-db.org/network/679935.Alfi_1065Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...]
Alfi_1066 protein networkhttps://string-db.org/network/679935.Alfi_1066Transporter, CPA2 family; TC 2.A.37.
Alfi_1067 protein networkhttps://string-db.org/network/679935.Alfi_1067Hypothetical protein.
Alfi_1068 protein networkhttps://string-db.org/network/679935.Alfi_1068Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1070 protein networkhttps://string-db.org/network/679935.Alfi_1070Hypothetical protein.
Alfi_1071 protein networkhttps://string-db.org/network/679935.Alfi_1071PFAM: Putative glycosyl hydrolase of unknown function (DUF1680).
Alfi_1072 protein networkhttps://string-db.org/network/679935.Alfi_1072PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain.
Alfi_1073 protein networkhttps://string-db.org/network/679935.Alfi_1073PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain.
Alfi_1074 protein networkhttps://string-db.org/network/679935.Alfi_1074N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
Alfi_1075 protein networkhttps://string-db.org/network/679935.Alfi_1075PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain.
Alfi_1076 protein networkhttps://string-db.org/network/679935.Alfi_1076PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; TIGRFAM: conserved repeat domain.
Alfi_1077 protein networkhttps://string-db.org/network/679935.Alfi_1077N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
Alfi_1078 protein networkhttps://string-db.org/network/679935.Alfi_1078Hypothetical protein.
Alfi_1079 protein networkhttps://string-db.org/network/679935.Alfi_1079PFAM: Glycoside hydrolase 97.
Alfi_1080 protein networkhttps://string-db.org/network/679935.Alfi_1080Trehalose/maltose hydrolase or phosphorylase; PFAM: Glycosyl hydrolase family 65 central catalytic domain.
Alfi_1081 protein networkhttps://string-db.org/network/679935.Alfi_1081Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_1082 protein networkhttps://string-db.org/network/679935.Alfi_1082Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_1083 protein networkhttps://string-db.org/network/679935.Alfi_1083TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1084 protein networkhttps://string-db.org/network/679935.Alfi_1084RagB/SusD family protein; PFAM: SusD family.
Alfi_1085 protein networkhttps://string-db.org/network/679935.Alfi_1085PFAM: F5/8 type C domain.
Alfi_1086 protein networkhttps://string-db.org/network/679935.Alfi_1086Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
Alfi_1087 protein networkhttps://string-db.org/network/679935.Alfi_1087Endopolygalacturonase; PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
Alfi_1088 protein networkhttps://string-db.org/network/679935.Alfi_1088Hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
Alfi_1089 protein networkhttps://string-db.org/network/679935.Alfi_1089Hypothetical protein.
Alfi_1090 protein networkhttps://string-db.org/network/679935.Alfi_1090Hypothetical protein; Manually curated.
Alfi_1091 protein networkhttps://string-db.org/network/679935.Alfi_1091N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
Alfi_1093 protein networkhttps://string-db.org/network/679935.Alfi_1093Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_1095 protein networkhttps://string-db.org/network/679935.Alfi_1095TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_1096 protein networkhttps://string-db.org/network/679935.Alfi_1096RagB/SusD family protein; PFAM: SusD family.
Alfi_1097 protein networkhttps://string-db.org/network/679935.Alfi_1097Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_1098 protein networkhttps://string-db.org/network/679935.Alfi_1098PFAM: Domain of unknown function (DUF1735).
Alfi_1099 protein networkhttps://string-db.org/network/679935.Alfi_1099Hypothetical protein.
Alfi_1100 protein networkhttps://string-db.org/network/679935.Alfi_1100PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
queA protein networkhttps://string-db.org/network/679935.Alfi_1101S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to g [...]
Alfi_1102 protein networkhttps://string-db.org/network/679935.Alfi_1102PFAM: F5/8 type C domain.
Alfi_1103 protein networkhttps://string-db.org/network/679935.Alfi_1103PFAM: Domain of unknown function (DUF1735).
Alfi_1104 protein networkhttps://string-db.org/network/679935.Alfi_1104Hypothetical protein.
Alfi_1105 protein networkhttps://string-db.org/network/679935.Alfi_1105Hypothetical protein.
Alfi_1106 protein networkhttps://string-db.org/network/679935.Alfi_1106TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_1107 protein networkhttps://string-db.org/network/679935.Alfi_1107Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_1108 protein networkhttps://string-db.org/network/679935.Alfi_1108PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_1109 protein networkhttps://string-db.org/network/679935.Alfi_1109N-acetyl-beta-hexosaminidase; PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
Alfi_1110 protein networkhttps://string-db.org/network/679935.Alfi_1110L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
prfC protein networkhttps://string-db.org/network/679935.Alfi_1111Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for U [...]
Alfi_1112 protein networkhttps://string-db.org/network/679935.Alfi_1112Pirin-related protein; PFAM: Pirin; Belongs to the pirin family.
Alfi_1113 protein networkhttps://string-db.org/network/679935.Alfi_1113Hypothetical protein; Manually curated.
Alfi_1114 protein networkhttps://string-db.org/network/679935.Alfi_1114Lysine 2,3-aminomutase; TIGRFAM: KamA family protein.
Alfi_1116 protein networkhttps://string-db.org/network/679935.Alfi_1116ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
Alfi_1117 protein networkhttps://string-db.org/network/679935.Alfi_1117ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
Alfi_1118 protein networkhttps://string-db.org/network/679935.Alfi_1118ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
rpsT protein networkhttps://string-db.org/network/679935.Alfi_1120Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
thiL-2 protein networkhttps://string-db.org/network/679935.Alfi_1121Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamin [...]
adk protein networkhttps://string-db.org/network/679935.Alfi_1122Adenylate kinase-like kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleoti [...]
Alfi_1123 protein networkhttps://string-db.org/network/679935.Alfi_1123Hypothetical protein.
Alfi_1124 protein networkhttps://string-db.org/network/679935.Alfi_1124Hypothetical protein.
rpsF protein networkhttps://string-db.org/network/679935.Alfi_1125Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
rpsR protein networkhttps://string-db.org/network/679935.Alfi_1126SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial riboso [...]
rplI protein networkhttps://string-db.org/network/679935.Alfi_1127LSU ribosomal protein L9P; Binds to the 23S rRNA.
Alfi_1128 protein networkhttps://string-db.org/network/679935.Alfi_1128DMT(drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family.
Alfi_1129 protein networkhttps://string-db.org/network/679935.Alfi_1129Hypothetical protein; PFAM: Domain of unknown function (DUF892).
Alfi_1130 protein networkhttps://string-db.org/network/679935.Alfi_1130Hypothetical protein.
Alfi_1131 protein networkhttps://string-db.org/network/679935.Alfi_1131Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
Alfi_1132 protein networkhttps://string-db.org/network/679935.Alfi_11325'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; Belongs to the 5'-nucleotidase family.
Alfi_1133 protein networkhttps://string-db.org/network/679935.Alfi_1133PFAM: Phosphoribulokinase / Uridine kinase family.
Alfi_1134 protein networkhttps://string-db.org/network/679935.Alfi_1134Glycine dehydrogenase, decarboxylating; PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); Belongs to the GcvP family.
Alfi_1135 protein networkhttps://string-db.org/network/679935.Alfi_1135Hypothetical protein.
Alfi_1136 protein networkhttps://string-db.org/network/679935.Alfi_1136PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.
Alfi_1137 protein networkhttps://string-db.org/network/679935.Alfi_1137Hypothetical protein.
Alfi_1138 protein networkhttps://string-db.org/network/679935.Alfi_1138PFAM: Protein kinase domain.
Alfi_1139 protein networkhttps://string-db.org/network/679935.Alfi_1139Hypothetical protein.
Alfi_1140 protein networkhttps://string-db.org/network/679935.Alfi_1140Hypothetical protein.
Alfi_1141 protein networkhttps://string-db.org/network/679935.Alfi_1141Hypothetical protein.
Alfi_1142 protein networkhttps://string-db.org/network/679935.Alfi_1142PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
rnz protein networkhttps://string-db.org/network/679935.Alfi_1143Metal-dependent hydrolase, beta-lactamase superfamily III; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing [...]
Alfi_1144 protein networkhttps://string-db.org/network/679935.Alfi_1144PFAM: SpoU rRNA Methylase family.
Alfi_1146 protein networkhttps://string-db.org/network/679935.Alfi_11464-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
thrS protein networkhttps://string-db.org/network/679935.Alfi_1147threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor en [...]
Alfi_1148 protein networkhttps://string-db.org/network/679935.Alfi_1148PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; Belongs to the IF-3 family.
Alfi_1149 protein networkhttps://string-db.org/network/679935.Alfi_1149PFAM: Acyl-protein synthetase, LuxE.
Alfi_1150 protein networkhttps://string-db.org/network/679935.Alfi_1150CMP-N-acetylneuraminic acid synthetase; PFAM: Cytidylyltransferase.
Alfi_1151 protein networkhttps://string-db.org/network/679935.Alfi_1151Hypothetical protein.
Alfi_1152 protein networkhttps://string-db.org/network/679935.Alfi_1152PFAM: Glycosyl transferase family 2.
Alfi_1153 protein networkhttps://string-db.org/network/679935.Alfi_1153PFAM: Esterase PHB depolymerase; TIGRFAM: esterase, PHB depolymerase family.
clpB protein networkhttps://string-db.org/network/679935.Alfi_1154ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belong [...]
dnaX protein networkhttps://string-db.org/network/679935.Alfi_1155DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' [...]
tyrS protein networkhttps://string-db.org/network/679935.Alfi_1156tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
Alfi_1157 protein networkhttps://string-db.org/network/679935.Alfi_1157Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
Alfi_1158 protein networkhttps://string-db.org/network/679935.Alfi_1158SNF family Na+-dependent transporter; PFAM: Sodium:neurotransmitter symporter family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
Alfi_1159 protein networkhttps://string-db.org/network/679935.Alfi_1159Putative phosphohydrolase.
ribH protein networkhttps://string-db.org/network/679935.Alfi_11606,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
Alfi_1161 protein networkhttps://string-db.org/network/679935.Alfi_1161Hypothetical protein.
recF protein networkhttps://string-db.org/network/679935.Alfi_1162DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...]
Alfi_1163 protein networkhttps://string-db.org/network/679935.Alfi_1163PFAM: Protein of unknown function (DUF721).
Alfi_1164 protein networkhttps://string-db.org/network/679935.Alfi_1164Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
Alfi_1165 protein networkhttps://string-db.org/network/679935.Alfi_1165Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair [...]
Alfi_1166 protein networkhttps://string-db.org/network/679935.Alfi_1166Hypothetical protein.
Alfi_1167 protein networkhttps://string-db.org/network/679935.Alfi_1167PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
Alfi_1168 protein networkhttps://string-db.org/network/679935.Alfi_1168Heat shock protein; PFAM: META domain.
Alfi_1169 protein networkhttps://string-db.org/network/679935.Alfi_1169PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
Alfi_1170 protein networkhttps://string-db.org/network/679935.Alfi_1170Hypothetical protein.
recR protein networkhttps://string-db.org/network/679935.Alfi_1171DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
Alfi_1172 protein networkhttps://string-db.org/network/679935.Alfi_1172DNA uptake lipoprotein; PFAM: Tetratricopeptide repeat; Bacterial SH3 domain.
Alfi_1173 protein networkhttps://string-db.org/network/679935.Alfi_1173Hypothetical protein.
Alfi_1174 protein networkhttps://string-db.org/network/679935.Alfi_1174Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
Alfi_1175 protein networkhttps://string-db.org/network/679935.Alfi_1175PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.
Alfi_1176 protein networkhttps://string-db.org/network/679935.Alfi_1176PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_1177 protein networkhttps://string-db.org/network/679935.Alfi_1177Hypothetical protein.
Alfi_1178 protein networkhttps://string-db.org/network/679935.Alfi_1178Hypothetical protein.
Alfi_1179 protein networkhttps://string-db.org/network/679935.Alfi_1179Alpha/beta superfamily hydrolase.
Alfi_1180 protein networkhttps://string-db.org/network/679935.Alfi_1180PFAM: NAD dependent epimerase/dehydratase family.
Alfi_1182 protein networkhttps://string-db.org/network/679935.Alfi_1182PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
Alfi_1183 protein networkhttps://string-db.org/network/679935.Alfi_1183PFAM: Prephenate dehydratase.
Alfi_1184 protein networkhttps://string-db.org/network/679935.Alfi_11843-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.
Alfi_1185 protein networkhttps://string-db.org/network/679935.Alfi_1185PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
Alfi_1186 protein networkhttps://string-db.org/network/679935.Alfi_1186PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
Alfi_1187 protein networkhttps://string-db.org/network/679935.Alfi_1187Phosphate/sulfate permease; PFAM: Phosphate transporter family.
Alfi_1190 protein networkhttps://string-db.org/network/679935.Alfi_1190DNA-binding domain-containing protein, AraC-type.
Alfi_1191 protein networkhttps://string-db.org/network/679935.Alfi_1191PFAM: Protein of unknown function (DUF2721).
Alfi_1192 protein networkhttps://string-db.org/network/679935.Alfi_1192Hypothetical protein.
Alfi_1193 protein networkhttps://string-db.org/network/679935.Alfi_1193Formate acetyltransferase 1; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1.
Alfi_1194 protein networkhttps://string-db.org/network/679935.Alfi_1194Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavo [...]
Alfi_1195 protein networkhttps://string-db.org/network/679935.Alfi_1195Amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein.
Alfi_1196 protein networkhttps://string-db.org/network/679935.Alfi_1196Putative dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
tatC protein networkhttps://string-db.org/network/679935.Alfi_1197Twin arginine targeting protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine mot [...]
tatA protein networkhttps://string-db.org/network/679935.Alfi_1198Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
Alfi_1199 protein networkhttps://string-db.org/network/679935.Alfi_1199PFAM: Domain of Unknown Function (DUF1080).
Alfi_1200 protein networkhttps://string-db.org/network/679935.Alfi_1200Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; manually curated.
Alfi_1201 protein networkhttps://string-db.org/network/679935.Alfi_1201PFAM: Domain of Unknown Function (DUF1080).
Alfi_1202 protein networkhttps://string-db.org/network/679935.Alfi_1202Hypothetical protein.
Alfi_1203 protein networkhttps://string-db.org/network/679935.Alfi_1203Hypothetical protein.
Alfi_1204 protein networkhttps://string-db.org/network/679935.Alfi_1204PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_1205 protein networkhttps://string-db.org/network/679935.Alfi_1205Hypothetical protein (Fib_succ_major); PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain.
Alfi_1206 protein networkhttps://string-db.org/network/679935.Alfi_1206RagB/SusD family protein; PFAM: SusD family.
Alfi_1207 protein networkhttps://string-db.org/network/679935.Alfi_1207TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1208 protein networkhttps://string-db.org/network/679935.Alfi_1208Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_1209 protein networkhttps://string-db.org/network/679935.Alfi_1209PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_1210 protein networkhttps://string-db.org/network/679935.Alfi_1210PFAM: Outer membrane efflux protein.
Alfi_1211 protein networkhttps://string-db.org/network/679935.Alfi_1211Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Alfi_1212 protein networkhttps://string-db.org/network/679935.Alfi_1212TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_1213 protein networkhttps://string-db.org/network/679935.Alfi_1213DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain.
Alfi_1214 protein networkhttps://string-db.org/network/679935.Alfi_1214DNA-binding domain-containing protein, AraC-type.
Alfi_1215 protein networkhttps://string-db.org/network/679935.Alfi_1215Alpha/beta superfamily hydrolase.
Alfi_1216 protein networkhttps://string-db.org/network/679935.Alfi_1216Hypothetical protein.
Alfi_1217 protein networkhttps://string-db.org/network/679935.Alfi_1217Hypothetical protein.
Alfi_1218 protein networkhttps://string-db.org/network/679935.Alfi_1218Hypothetical protein.
Alfi_1219 protein networkhttps://string-db.org/network/679935.Alfi_1219Hypothetical protein.
Alfi_1220 protein networkhttps://string-db.org/network/679935.Alfi_1220Hypothetical protein.
Alfi_1221 protein networkhttps://string-db.org/network/679935.Alfi_1221Hypothetical protein; Manually curated.
Alfi_1222 protein networkhttps://string-db.org/network/679935.Alfi_1222Helix-turn-helix protein; Manually curated.
Alfi_1224 protein networkhttps://string-db.org/network/679935.Alfi_12247-keto-8-aminopelargonate synthetase-like enzyme; PFAM: Aminotransferase class I and II.
Alfi_1225 protein networkhttps://string-db.org/network/679935.Alfi_1225PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
Alfi_1227 protein networkhttps://string-db.org/network/679935.Alfi_1227Fe-S oxidoreductase.
Alfi_1228 protein networkhttps://string-db.org/network/679935.Alfi_1228Hypothetical protein.
Alfi_1229 protein networkhttps://string-db.org/network/679935.Alfi_1229PFAM: Protein of unknown function (DUF328); manually curated; Belongs to the UPF0246 family.
dxs protein networkhttps://string-db.org/network/679935.Alfi_12301-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
pyrH protein networkhttps://string-db.org/network/679935.Alfi_1231Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
Alfi_1232 protein networkhttps://string-db.org/network/679935.Alfi_1232Peroxiredoxin; PFAM: AhpC/TSA family.
frr protein networkhttps://string-db.org/network/679935.Alfi_1233Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
Alfi_1234 protein networkhttps://string-db.org/network/679935.Alfi_1234PFAM: Protein of unknown function (DUF3575).
pckA protein networkhttps://string-db.org/network/679935.Alfi_1235ATP-dependent phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer be [...]
Alfi_1236 protein networkhttps://string-db.org/network/679935.Alfi_1236Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalentl [...]
Alfi_1237 protein networkhttps://string-db.org/network/679935.Alfi_1237PFAM: Carbohydrate phosphorylase; Glycogen synthase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
Alfi_1238 protein networkhttps://string-db.org/network/679935.Alfi_1238Glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
Alfi_1239 protein networkhttps://string-db.org/network/679935.Alfi_1239Glycosyltransferase; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
Alfi_1240 protein networkhttps://string-db.org/network/679935.Alfi_1240Alpha-amylase/alpha-mannosidase; PFAM: Glycosyl hydrolase family 57.
Alfi_1241 protein networkhttps://string-db.org/network/679935.Alfi_1241Hypothetical protein.
Alfi_1242 protein networkhttps://string-db.org/network/679935.Alfi_1242Putative transcriptional regulator; PFAM: Helix-turn-helix.
Alfi_1243 protein networkhttps://string-db.org/network/679935.Alfi_1243Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein.
rsgA protein networkhttps://string-db.org/network/679935.Alfi_1244Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature sub [...]
trmH protein networkhttps://string-db.org/network/679935.Alfi_1245rRNA methylase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
Alfi_1246 protein networkhttps://string-db.org/network/679935.Alfi_1246PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
nfo protein networkhttps://string-db.org/network/679935.Alfi_1247Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deox [...]
Alfi_1248 protein networkhttps://string-db.org/network/679935.Alfi_1248PFAM: Protein of unknown function (DUF3078).
Alfi_1249 protein networkhttps://string-db.org/network/679935.Alfi_1249C-terminal processing peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.
Alfi_1250 protein networkhttps://string-db.org/network/679935.Alfi_1250Hypothetical protein.
Alfi_1251 protein networkhttps://string-db.org/network/679935.Alfi_1251Hypothetical protein.
Alfi_1252 protein networkhttps://string-db.org/network/679935.Alfi_1252Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
Alfi_1253 protein networkhttps://string-db.org/network/679935.Alfi_1253PFAM: Tetratricopeptide repeat.
pnp protein networkhttps://string-db.org/network/679935.Alfi_1254Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rpsO protein networkhttps://string-db.org/network/679935.Alfi_1255Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
Alfi_1256 protein networkhttps://string-db.org/network/679935.Alfi_1256Membrane-associated lipoprotein involved in thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a thre [...]
Alfi_1257 protein networkhttps://string-db.org/network/679935.Alfi_1257Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.
Alfi_1258 protein networkhttps://string-db.org/network/679935.Alfi_1258DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain.
Alfi_1259 protein networkhttps://string-db.org/network/679935.Alfi_1259Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1260 protein networkhttps://string-db.org/network/679935.Alfi_1260Hypothetical protein.
Alfi_1261 protein networkhttps://string-db.org/network/679935.Alfi_1261Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 famil [...]
Alfi_1262 protein networkhttps://string-db.org/network/679935.Alfi_1262PFAM: WbqC-like protein family.
ispG protein networkhttps://string-db.org/network/679935.Alfi_12631-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG [...]
Alfi_1264 protein networkhttps://string-db.org/network/679935.Alfi_1264Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
recG protein networkhttps://string-db.org/network/679935.Alfi_1265ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...]
Alfi_1266 protein networkhttps://string-db.org/network/679935.Alfi_1266PFAM: Protein of unknown function (DUF3108).
Alfi_1267 protein networkhttps://string-db.org/network/679935.Alfi_1267Hypothetical protein.
Alfi_1268 protein networkhttps://string-db.org/network/679935.Alfi_1268Transcriptional regulator/sugar kinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
Alfi_1269 protein networkhttps://string-db.org/network/679935.Alfi_1269Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
Alfi_1270 protein networkhttps://string-db.org/network/679935.Alfi_1270Collagenase; PFAM: Peptidase family U32.
Alfi_1271 protein networkhttps://string-db.org/network/679935.Alfi_1271Hypothetical protein.
Alfi_1272 protein networkhttps://string-db.org/network/679935.Alfi_1272Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family.
Alfi_1273 protein networkhttps://string-db.org/network/679935.Alfi_1273Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
Alfi_1274 protein networkhttps://string-db.org/network/679935.Alfi_1274Putative MccF-like protein (microcin C7 resistance); PFAM: LD-carboxypeptidase.
Alfi_1275 protein networkhttps://string-db.org/network/679935.Alfi_1275PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Belongs to the peptidase M24B family.
Alfi_1276 protein networkhttps://string-db.org/network/679935.Alfi_1276PFAM: Phosphorylase superfamily.
Alfi_1277 protein networkhttps://string-db.org/network/679935.Alfi_1277Hypothetical protein.
mqnD protein networkhttps://string-db.org/network/679935.Alfi_1278Putative periplasmic solute-binding protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone [...]
Alfi_1279 protein networkhttps://string-db.org/network/679935.Alfi_1279Putative membrane protein; PFAM: Protein of unknown function (DUF1624); Protein of unknown function (DUF418).
Alfi_1280 protein networkhttps://string-db.org/network/679935.Alfi_1280Translation elongation factor-like GTPase; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: t [...]
Alfi_1281 protein networkhttps://string-db.org/network/679935.Alfi_1281Phosphate/sulfate permease; PFAM: Phosphate transporter family.
Alfi_1282 protein networkhttps://string-db.org/network/679935.Alfi_1282Hypothetical protein.
Alfi_1283 protein networkhttps://string-db.org/network/679935.Alfi_1283PFAM: Acetyltransferase (GNAT) family.
rpmH protein networkhttps://string-db.org/network/679935.Alfi_1284PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.
murA protein networkhttps://string-db.org/network/679935.Alfi_1285UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
tdk protein networkhttps://string-db.org/network/679935.Alfi_1286PFAM: Thymidine kinase.
Alfi_1287 protein networkhttps://string-db.org/network/679935.Alfi_1287PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
Alfi_1288 protein networkhttps://string-db.org/network/679935.Alfi_1288Hypothetical protein.
Alfi_1289 protein networkhttps://string-db.org/network/679935.Alfi_1289PFAM: Carbon starvation protein CstA.
Alfi_1291 protein networkhttps://string-db.org/network/679935.Alfi_1291PFAM: 'Cold-shock' DNA-binding domain.
Alfi_1292 protein networkhttps://string-db.org/network/679935.Alfi_1292RRM domain-containing RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).
Alfi_1293 protein networkhttps://string-db.org/network/679935.Alfi_1293PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
Alfi_1294 protein networkhttps://string-db.org/network/679935.Alfi_1294PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) famil [...]
Alfi_1295 protein networkhttps://string-db.org/network/679935.Alfi_1295PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_1296 protein networkhttps://string-db.org/network/679935.Alfi_1296PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
Alfi_1297 protein networkhttps://string-db.org/network/679935.Alfi_1297PFAM: Response regulator receiver domain.
Alfi_1298 protein networkhttps://string-db.org/network/679935.Alfi_1298PFAM: Response regulator receiver domain.
Alfi_1299 protein networkhttps://string-db.org/network/679935.Alfi_1299Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.
Alfi_1300 protein networkhttps://string-db.org/network/679935.Alfi_1300PFAM: Outer membrane efflux protein.
Alfi_1301 protein networkhttps://string-db.org/network/679935.Alfi_1301Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein.
Alfi_1302 protein networkhttps://string-db.org/network/679935.Alfi_1302Hypothetical protein.
Alfi_1303 protein networkhttps://string-db.org/network/679935.Alfi_1303Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
Alfi_1304 protein networkhttps://string-db.org/network/679935.Alfi_1304PFAM: Glycosyl transferase family 2.
Alfi_1305 protein networkhttps://string-db.org/network/679935.Alfi_1305Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_1306 protein networkhttps://string-db.org/network/679935.Alfi_1306Hypothetical protein.
Alfi_1307 protein networkhttps://string-db.org/network/679935.Alfi_1307Acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (three repeats).
Alfi_1308 protein networkhttps://string-db.org/network/679935.Alfi_1308Hypothetical protein.
Alfi_1309 protein networkhttps://string-db.org/network/679935.Alfi_1309Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
Alfi_1310 protein networkhttps://string-db.org/network/679935.Alfi_1310Hypothetical protein.
Alfi_1311 protein networkhttps://string-db.org/network/679935.Alfi_1311PFAM: Glycosyl transferase family 2.
Alfi_1312 protein networkhttps://string-db.org/network/679935.Alfi_1312PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Alfi_1313 protein networkhttps://string-db.org/network/679935.Alfi_1313Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_1314 protein networkhttps://string-db.org/network/679935.Alfi_1314PFAM: NAD dependent epimerase/dehydratase family.
Alfi_1315 protein networkhttps://string-db.org/network/679935.Alfi_1315Esterase/lipase; PFAM: alpha/beta hydrolase fold.
Alfi_1316 protein networkhttps://string-db.org/network/679935.Alfi_1316Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
lnt protein networkhttps://string-db.org/network/679935.Alfi_1317Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
Alfi_1318 protein networkhttps://string-db.org/network/679935.Alfi_1318PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
Alfi_1319 protein networkhttps://string-db.org/network/679935.Alfi_1319PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_1320 protein networkhttps://string-db.org/network/679935.Alfi_1320Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_1322 protein networkhttps://string-db.org/network/679935.Alfi_1322Hypothetical protein.
Alfi_1323 protein networkhttps://string-db.org/network/679935.Alfi_1323Hypothetical protein.
Alfi_1324 protein networkhttps://string-db.org/network/679935.Alfi_1324PFAM: Domain of unknown function (DUF1735).
Alfi_1325 protein networkhttps://string-db.org/network/679935.Alfi_1325N-acetyl-beta-hexosaminidase; PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
Alfi_1327 protein networkhttps://string-db.org/network/679935.Alfi_1327Arylsulfatase A family protein; PFAM: Sulfatase.
Alfi_1328 protein networkhttps://string-db.org/network/679935.Alfi_1328PFAM: Protein of unknown function (DUF3467).
Alfi_1329 protein networkhttps://string-db.org/network/679935.Alfi_1329Putative threonine efflux protein; PFAM: LysE type translocator.
cmk protein networkhttps://string-db.org/network/679935.Alfi_1330PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase.
ispH protein networkhttps://string-db.org/network/679935.Alfi_1331(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and d [...]
Alfi_1332 protein networkhttps://string-db.org/network/679935.Alfi_1332Hypothetical protein.
Alfi_1333 protein networkhttps://string-db.org/network/679935.Alfi_1333C-terminal processing peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.
Alfi_1334 protein networkhttps://string-db.org/network/679935.Alfi_1334PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Alfi_1335 protein networkhttps://string-db.org/network/679935.Alfi_1335Hypothetical protein.
Alfi_1336 protein networkhttps://string-db.org/network/679935.Alfi_1336PFAM: Uroporphyrinogen-III synthase HemD.
rnpA protein networkhttps://string-db.org/network/679935.Alfi_1337RNase P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The pr [...]
Alfi_1338 protein networkhttps://string-db.org/network/679935.Alfi_1338Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
Alfi_1339 protein networkhttps://string-db.org/network/679935.Alfi_1339PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter.
Alfi_1340 protein networkhttps://string-db.org/network/679935.Alfi_1340Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
Alfi_1341 protein networkhttps://string-db.org/network/679935.Alfi_1341Regulator of cell morphogenesis and NO signaling; PFAM: Hemerythrin HHE cation binding domain.
Alfi_1342 protein networkhttps://string-db.org/network/679935.Alfi_1342Phosphoglycerol transferase family protein, alkaline phosphatase superfamily; PFAM: Sulfatase.
Alfi_1343 protein networkhttps://string-db.org/network/679935.Alfi_1343PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase.
hflX protein networkhttps://string-db.org/network/679935.Alfi_1344GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPa [...]
Alfi_1345 protein networkhttps://string-db.org/network/679935.Alfi_1345TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could a [...]
rlmN protein networkhttps://string-db.org/network/679935.Alfi_134623S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
Alfi_1347 protein networkhttps://string-db.org/network/679935.Alfi_1347Thiol:disulfide interchange protein; PFAM: Thioredoxin.
Alfi_1348 protein networkhttps://string-db.org/network/679935.Alfi_1348Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
Alfi_1349 protein networkhttps://string-db.org/network/679935.Alfi_1349Hypothetical protein.
Alfi_1350 protein networkhttps://string-db.org/network/679935.Alfi_1350Hypothetical protein.
Alfi_1351 protein networkhttps://string-db.org/network/679935.Alfi_1351Hypothetical protein.
Alfi_1352 protein networkhttps://string-db.org/network/679935.Alfi_1352Putative transcriptional regulator.
Alfi_1353 protein networkhttps://string-db.org/network/679935.Alfi_1353Hypothetical protein.
rsmG protein networkhttps://string-db.org/network/679935.Alfi_135416S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
Alfi_1355 protein networkhttps://string-db.org/network/679935.Alfi_1355PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_1356 protein networkhttps://string-db.org/network/679935.Alfi_1356PFAM: Glycosyl transferase family 2.
tgt protein networkhttps://string-db.org/network/679935.Alfi_1357tRNA-guanine transglycosylase, queuosine-34-forming; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon [...]
Alfi_1358 protein networkhttps://string-db.org/network/679935.Alfi_1358PFAM: Predicted permease YjgP/YjgQ family.
mqnE protein networkhttps://string-db.org/network/679935.Alfi_1359Putative menaquinone biosynthesis protein, SCO4494 family; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to [...]
Alfi_1360 protein networkhttps://string-db.org/network/679935.Alfi_1360Hypothetical protein; PFAM: PASTA domain.
Alfi_1361 protein networkhttps://string-db.org/network/679935.Alfi_1361Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
Alfi_1362 protein networkhttps://string-db.org/network/679935.Alfi_1362Putative radical SAM protein YgiQ; PFAM: Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ.
Alfi_1363 protein networkhttps://string-db.org/network/679935.Alfi_1363Hypothetical protein.
Alfi_1364 protein networkhttps://string-db.org/network/679935.Alfi_1364Hypothetical protein.
Alfi_1365 protein networkhttps://string-db.org/network/679935.Alfi_1365Glycosyltransferase; PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1.
Alfi_1366 protein networkhttps://string-db.org/network/679935.Alfi_1366Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_1367 protein networkhttps://string-db.org/network/679935.Alfi_1367Acetyltransferase, fucose-4-O-acetylase; PFAM: Acyltransferase family; manually curated.
Alfi_1368 protein networkhttps://string-db.org/network/679935.Alfi_1368Hypothetical protein; PFAM: Bacterial transferase hexapeptide (three repeats).
Alfi_1369 protein networkhttps://string-db.org/network/679935.Alfi_1369Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
Alfi_1370 protein networkhttps://string-db.org/network/679935.Alfi_1370Hypothetical protein.
Alfi_1371 protein networkhttps://string-db.org/network/679935.Alfi_1371PFAM: Nitroreductase family.
Alfi_1372 protein networkhttps://string-db.org/network/679935.Alfi_1372Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase.
Alfi_1373 protein networkhttps://string-db.org/network/679935.Alfi_1373PFAM: Glycosyl transferase family 2.
Alfi_1374 protein networkhttps://string-db.org/network/679935.Alfi_1374Na+-driven multidrug efflux pump; PFAM: Polysaccharide biosynthesis protein.
Alfi_1375 protein networkhttps://string-db.org/network/679935.Alfi_1375dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose d [...]
Alfi_1376 protein networkhttps://string-db.org/network/679935.Alfi_1376Mannosyltransferase OCH1-like enzyme; PFAM: Glycosyltransferase sugar-binding region containing DXD motif.
Alfi_1377 protein networkhttps://string-db.org/network/679935.Alfi_1377dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
Alfi_1378 protein networkhttps://string-db.org/network/679935.Alfi_1378Acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (three repeats).
Alfi_1379 protein networkhttps://string-db.org/network/679935.Alfi_1379dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehy [...]
Alfi_1380 protein networkhttps://string-db.org/network/679935.Alfi_1380Acetyltransferase, fucose-4-O-acetylase.
Alfi_1381 protein networkhttps://string-db.org/network/679935.Alfi_1381Glucose-1-phosphate thymidylyltransferase, short form; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phos [...]
Alfi_1382 protein networkhttps://string-db.org/network/679935.Alfi_1382UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4.
Alfi_1383 protein networkhttps://string-db.org/network/679935.Alfi_1383Hypothetical protein.
Alfi_1384 protein networkhttps://string-db.org/network/679935.Alfi_1384PFAM: Transcription termination factor nusG.
Alfi_1385 protein networkhttps://string-db.org/network/679935.Alfi_1385Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1386 protein networkhttps://string-db.org/network/679935.Alfi_1386Putative membrane protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein.
Alfi_1387 protein networkhttps://string-db.org/network/679935.Alfi_1387PFAM: Phosphate-selective porin O and P.
Alfi_1388 protein networkhttps://string-db.org/network/679935.Alfi_1388Hypothetical protein.
recO protein networkhttps://string-db.org/network/679935.Alfi_1389Recombinational DNA repair protein (RecF pathway); Involved in DNA repair and RecF pathway recombination.
Alfi_1390 protein networkhttps://string-db.org/network/679935.Alfi_1390PFAM: Ribosomal protein L11 methyltransferase (PrmA).
xerC protein networkhttps://string-db.org/network/679935.Alfi_1391Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert [...]
Alfi_1392 protein networkhttps://string-db.org/network/679935.Alfi_1392Ig-like domain-containing surface protein; PFAM: Bacterial Ig-like domain (group 2).
Alfi_1393 protein networkhttps://string-db.org/network/679935.Alfi_1393Hypothetical protein.
Alfi_1394 protein networkhttps://string-db.org/network/679935.Alfi_1394RagB/SusD family protein; PFAM: SusD family.
Alfi_1395 protein networkhttps://string-db.org/network/679935.Alfi_1395TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1396 protein networkhttps://string-db.org/network/679935.Alfi_1396Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_1397 protein networkhttps://string-db.org/network/679935.Alfi_1397PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_1398 protein networkhttps://string-db.org/network/679935.Alfi_1398Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 famil [...]
Alfi_1399 protein networkhttps://string-db.org/network/679935.Alfi_1399Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family.
Alfi_1400 protein networkhttps://string-db.org/network/679935.Alfi_1400Hypothetical protein.
Alfi_1401 protein networkhttps://string-db.org/network/679935.Alfi_1401ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
rbfA protein networkhttps://string-db.org/network/679935.Alfi_1402Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
Alfi_1403 protein networkhttps://string-db.org/network/679935.Alfi_1403Hypothetical protein.
Alfi_1404 protein networkhttps://string-db.org/network/679935.Alfi_1404Hypothetical protein.
Alfi_1405 protein networkhttps://string-db.org/network/679935.Alfi_1405Hypothetical protein.
Alfi_1406 protein networkhttps://string-db.org/network/679935.Alfi_1406PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
Alfi_1407 protein networkhttps://string-db.org/network/679935.Alfi_1407TIGRFAM: DNA polymerase III, delta' subunit.
Alfi_1408 protein networkhttps://string-db.org/network/679935.Alfi_1408Hypothetical protein.
Alfi_1409 protein networkhttps://string-db.org/network/679935.Alfi_1409Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
Alfi_1410 protein networkhttps://string-db.org/network/679935.Alfi_1410PFAM: Protein of unknown function (DUF3575).
Alfi_1411 protein networkhttps://string-db.org/network/679935.Alfi_1411Hypothetical protein.
Alfi_1413 protein networkhttps://string-db.org/network/679935.Alfi_1413PFAM: Protein of unknown function (DUF1812).
Alfi_1414 protein networkhttps://string-db.org/network/679935.Alfi_1414PFAM: Protein of unknown function (DUF1812).
Alfi_1415 protein networkhttps://string-db.org/network/679935.Alfi_1415Hypothetical protein.
Alfi_1416 protein networkhttps://string-db.org/network/679935.Alfi_1416PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA).
mqnA protein networkhttps://string-db.org/network/679935.Alfi_1417Putative periplasmic solute-binding protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
Alfi_1418 protein networkhttps://string-db.org/network/679935.Alfi_1418Hypothetical protein.
Alfi_1419 protein networkhttps://string-db.org/network/679935.Alfi_1419Hypothetical protein.
Alfi_1420 protein networkhttps://string-db.org/network/679935.Alfi_1420Hypothetical protein.
Alfi_1421 protein networkhttps://string-db.org/network/679935.Alfi_1421Hypothetical protein.
Alfi_1422 protein networkhttps://string-db.org/network/679935.Alfi_1422Protease subunit of ATP-dependent protease; PFAM: Clp protease; Belongs to the peptidase S14 family.
Alfi_1423 protein networkhttps://string-db.org/network/679935.Alfi_1423Hypothetical protein.
Alfi_1424 protein networkhttps://string-db.org/network/679935.Alfi_1424Hypothetical protein.
Alfi_1425 protein networkhttps://string-db.org/network/679935.Alfi_1425PFAM: Phage portal protein.
Alfi_1426 protein networkhttps://string-db.org/network/679935.Alfi_1426Hypothetical protein.
Alfi_1427 protein networkhttps://string-db.org/network/679935.Alfi_1427Phage-related holin (lysis protein); PFAM: Holin family.
Alfi_1428 protein networkhttps://string-db.org/network/679935.Alfi_1428Hypothetical protein.
Alfi_1429 protein networkhttps://string-db.org/network/679935.Alfi_1429PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein.
Alfi_1430 protein networkhttps://string-db.org/network/679935.Alfi_1430SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase.
Alfi_1431 protein networkhttps://string-db.org/network/679935.Alfi_1431Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
Alfi_1432 protein networkhttps://string-db.org/network/679935.Alfi_1432Hypothetical protein; PFAM: NADP oxidoreductase coenzyme F420-dependent; Domain of unknown function (DUF2520).
Alfi_1433 protein networkhttps://string-db.org/network/679935.Alfi_1433PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
Alfi_1435 protein networkhttps://string-db.org/network/679935.Alfi_1435Hypothetical protein.
Alfi_1436 protein networkhttps://string-db.org/network/679935.Alfi_1436Hypothetical protein.
rsmH protein networkhttps://string-db.org/network/679935.Alfi_1437S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
Alfi_1438 protein networkhttps://string-db.org/network/679935.Alfi_1438Hypothetical protein.
Alfi_1439 protein networkhttps://string-db.org/network/679935.Alfi_1439Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain.
murE protein networkhttps://string-db.org/network/679935.Alfi_1440UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of b [...]
mraY protein networkhttps://string-db.org/network/679935.Alfi_1441Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murD protein networkhttps://string-db.org/network/679935.Alfi_1442UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF [...]
Alfi_1443 protein networkhttps://string-db.org/network/679935.Alfi_1443Bacterial cell division membrane protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
Alfi_1444 protein networkhttps://string-db.org/network/679935.Alfi_1444Ribosome-associated heat shock protein implicated in recycling of 50S subunit; PFAM: S4 domain.
pth protein networkhttps://string-db.org/network/679935.Alfi_1445peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
rplY protein networkhttps://string-db.org/network/679935.Alfi_1446LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 f [...]
Alfi_1447 protein networkhttps://string-db.org/network/679935.Alfi_1447PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_1448 protein networkhttps://string-db.org/network/679935.Alfi_1448Hypothetical protein.
Alfi_1449 protein networkhttps://string-db.org/network/679935.Alfi_1449F0F1-type ATP synthase, beta subunit; PFAM: Protein of unknown function (DUF2807); Protein of unknown function, DUF583.
leuA protein networkhttps://string-db.org/network/679935.Alfi_14502-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...]
leuC protein networkhttps://string-db.org/network/679935.Alfi_14513-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
Alfi_1452 protein networkhttps://string-db.org/network/679935.Alfi_14523-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
Alfi_1453 protein networkhttps://string-db.org/network/679935.Alfi_1453Isopropylmalate/homocitrate/citramalate synthase; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; Belongs to the alpha-IPM synthase/homocitrate synthase family.
leuB protein networkhttps://string-db.org/network/679935.Alfi_14543-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
Alfi_1455 protein networkhttps://string-db.org/network/679935.Alfi_1455L-threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.
thrB protein networkhttps://string-db.org/network/679935.Alfi_1456Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
ilvD protein networkhttps://string-db.org/network/679935.Alfi_1457PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
Alfi_1458 protein networkhttps://string-db.org/network/679935.Alfi_1458Acetolactate synthase, large subunit; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal [...]
Alfi_1459 protein networkhttps://string-db.org/network/679935.Alfi_1459PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit.
Alfi_1460 protein networkhttps://string-db.org/network/679935.Alfi_1460Ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase.
Alfi_1461 protein networkhttps://string-db.org/network/679935.Alfi_1461PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
Alfi_1462 protein networkhttps://string-db.org/network/679935.Alfi_1462UDP-galactose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
Alfi_1463 protein networkhttps://string-db.org/network/679935.Alfi_1463PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
Alfi_1464 protein networkhttps://string-db.org/network/679935.Alfi_1464PFAM: Transposase IS116/IS110/IS902 family; Transposase.
kbl protein networkhttps://string-db.org/network/679935.Alfi_14652-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
Alfi_1466 protein networkhttps://string-db.org/network/679935.Alfi_1466Transcriptional regulator; PFAM: AsnC family.
Alfi_1467 protein networkhttps://string-db.org/network/679935.Alfi_1467Hypothetical protein.
Alfi_1468 protein networkhttps://string-db.org/network/679935.Alfi_1468Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction doma [...]
Alfi_1469 protein networkhttps://string-db.org/network/679935.Alfi_1469PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
Alfi_1470 protein networkhttps://string-db.org/network/679935.Alfi_1470ABC-type Na+ efflux pump, permease component.
Alfi_1471 protein networkhttps://string-db.org/network/679935.Alfi_1471ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
Alfi_1472 protein networkhttps://string-db.org/network/679935.Alfi_1472Putative metalloendopeptidase; PFAM: Peptidase family M13.
pgk protein networkhttps://string-db.org/network/679935.Alfi_1473PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
Alfi_1474 protein networkhttps://string-db.org/network/679935.Alfi_1474Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1475 protein networkhttps://string-db.org/network/679935.Alfi_1475Hypothetical protein.
Alfi_1476 protein networkhttps://string-db.org/network/679935.Alfi_1476Hypothetical protein.
Alfi_1477 protein networkhttps://string-db.org/network/679935.Alfi_1477Hypothetical protein; Manually curated.
Alfi_1478 protein networkhttps://string-db.org/network/679935.Alfi_1478Hypothetical protein.
Alfi_1479 protein networkhttps://string-db.org/network/679935.Alfi_1479Membrane-bound metallopeptidase; PFAM: Plasmid recombination enzyme.
Alfi_1480 protein networkhttps://string-db.org/network/679935.Alfi_1480Hypothetical protein.
Alfi_1481 protein networkhttps://string-db.org/network/679935.Alfi_1481Hypothetical protein.
Alfi_1482 protein networkhttps://string-db.org/network/679935.Alfi_1482Hypothetical protein.
Alfi_1483 protein networkhttps://string-db.org/network/679935.Alfi_1483DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
Alfi_1484 protein networkhttps://string-db.org/network/679935.Alfi_1484Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
pheS protein networkhttps://string-db.org/network/679935.Alfi_1485phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha s [...]
Alfi_1486 protein networkhttps://string-db.org/network/679935.Alfi_1486Hypothetical protein.
Alfi_1487 protein networkhttps://string-db.org/network/679935.Alfi_1487Membrane-bound metallopeptidase; PFAM: Peptidase family M23.
ybeY protein networkhttps://string-db.org/network/679935.Alfi_1488Metalloprotein, YbeY/UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
mnmG protein networkhttps://string-db.org/network/679935.Alfi_1489Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
Alfi_1490 protein networkhttps://string-db.org/network/679935.Alfi_1490PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.
metG protein networkhttps://string-db.org/network/679935.Alfi_1491Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through [...]
Alfi_1492 protein networkhttps://string-db.org/network/679935.Alfi_1492V8-like Glu-specific endopeptidase; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
nadA protein networkhttps://string-db.org/network/679935.Alfi_1493Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
Alfi_1494 protein networkhttps://string-db.org/network/679935.Alfi_1494ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Alfi_1495 protein networkhttps://string-db.org/network/679935.Alfi_1495PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type.
Alfi_1496 protein networkhttps://string-db.org/network/679935.Alfi_1496DNA-binding domain-containing protein, AraC-type.
Alfi_1497 protein networkhttps://string-db.org/network/679935.Alfi_1497Hypothetical protein.
Alfi_1498 protein networkhttps://string-db.org/network/679935.Alfi_1498PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.
polA protein networkhttps://string-db.org/network/679935.Alfi_1499DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
Alfi_1500 protein networkhttps://string-db.org/network/679935.Alfi_1500Hypothetical protein.
Alfi_1501 protein networkhttps://string-db.org/network/679935.Alfi_1501Hypothetical protein.
Alfi_1502 protein networkhttps://string-db.org/network/679935.Alfi_1502Transposase; PFAM: Integrase core domain; manually curated.
Alfi_1503 protein networkhttps://string-db.org/network/679935.Alfi_1503Transposase; Manually curated.
folE protein networkhttps://string-db.org/network/679935.Alfi_1504PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I.
Alfi_1505 protein networkhttps://string-db.org/network/679935.Alfi_1505Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...]
Alfi_1506 protein networkhttps://string-db.org/network/679935.Alfi_1506Phosphoserine phosphatase; Manually curated.
Alfi_1507 protein networkhttps://string-db.org/network/679935.Alfi_1507PFAM: Nitroreductase family.
Alfi_1508 protein networkhttps://string-db.org/network/679935.Alfi_1508PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.
Alfi_1509 protein networkhttps://string-db.org/network/679935.Alfi_1509PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.
lipB protein networkhttps://string-db.org/network/679935.Alfi_1510Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
lipA protein networkhttps://string-db.org/network/679935.Alfi_1511Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, ther [...]
Alfi_1512 protein networkhttps://string-db.org/network/679935.Alfi_1512Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: AraC-like ligand binding domain.
Alfi_1513 protein networkhttps://string-db.org/network/679935.Alfi_1513Hypothetical protein.
rnhB protein networkhttps://string-db.org/network/679935.Alfi_1514Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
Alfi_1515 protein networkhttps://string-db.org/network/679935.Alfi_1515PFAM: Biopolymer transport protein ExbD/TolR.
Alfi_1516 protein networkhttps://string-db.org/network/679935.Alfi_1516PFAM: Biopolymer transport protein ExbD/TolR.
Alfi_1517 protein networkhttps://string-db.org/network/679935.Alfi_1517Hypothetical protein.
Alfi_1518 protein networkhttps://string-db.org/network/679935.Alfi_1518Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
Alfi_1519 protein networkhttps://string-db.org/network/679935.Alfi_1519Hypothetical protein.
Alfi_1520 protein networkhttps://string-db.org/network/679935.Alfi_1520PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I.
Alfi_1521 protein networkhttps://string-db.org/network/679935.Alfi_1521Hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
Alfi_1522 protein networkhttps://string-db.org/network/679935.Alfi_1522PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.
Alfi_1524 protein networkhttps://string-db.org/network/679935.Alfi_1524Transcriptional accessory protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.
Alfi_1525 protein networkhttps://string-db.org/network/679935.Alfi_1525PFAM: Aldo/keto reductase family.
Alfi_1526 protein networkhttps://string-db.org/network/679935.Alfi_1526Uncharacterized Fe-S center protein; PFAM: Domain of unknown function (DUF362).
Alfi_1527 protein networkhttps://string-db.org/network/679935.Alfi_1527Hypothetical protein.
Alfi_1528 protein networkhttps://string-db.org/network/679935.Alfi_1528PFAM: Domain of unknown function (DUF1893).
Alfi_1529 protein networkhttps://string-db.org/network/679935.Alfi_1529Alpha-galactosidase; PFAM: Melibiase.
Alfi_1530 protein networkhttps://string-db.org/network/679935.Alfi_1530Hypothetical protein.
Alfi_1531 protein networkhttps://string-db.org/network/679935.Alfi_1531Coenzyme F390 synthetase; PFAM: AMP-binding enzyme.
Alfi_1532 protein networkhttps://string-db.org/network/679935.Alfi_1532Putative choloylglycine hydrolase; PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
Alfi_1533 protein networkhttps://string-db.org/network/679935.Alfi_1533Phytoene dehydrogenase-like oxidoreductase; PFAM: FAD dependent oxidoreductase.
Alfi_1534 protein networkhttps://string-db.org/network/679935.Alfi_1534Putative RND superfamily exporter; PFAM: Acyltransferase; MMPL family; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
Alfi_1535 protein networkhttps://string-db.org/network/679935.Alfi_1535Glycosyl transferase; PFAM: Uncharacterized protein conserved in bacteria (DUF2062); Glycosyl transferase family 2.
Alfi_1536 protein networkhttps://string-db.org/network/679935.Alfi_15363-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: FabA-like domain.
Alfi_1537 protein networkhttps://string-db.org/network/679935.Alfi_1537PFAM: Outer membrane lipoprotein carrier protein LolA.
Alfi_1538 protein networkhttps://string-db.org/network/679935.Alfi_1538Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
Alfi_1539 protein networkhttps://string-db.org/network/679935.Alfi_1539Hypothetical protein.
Alfi_1540 protein networkhttps://string-db.org/network/679935.Alfi_1540PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
Alfi_1541 protein networkhttps://string-db.org/network/679935.Alfi_1541Acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
Alfi_1542 protein networkhttps://string-db.org/network/679935.Alfi_1542PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
Alfi_1543 protein networkhttps://string-db.org/network/679935.Alfi_1543PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
Alfi_1544 protein networkhttps://string-db.org/network/679935.Alfi_1544Hypothetical protein.
Alfi_1545 protein networkhttps://string-db.org/network/679935.Alfi_1545Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
Alfi_1546 protein networkhttps://string-db.org/network/679935.Alfi_1546Putative acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase.
acpP-2 protein networkhttps://string-db.org/network/679935.Alfi_1547Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
Alfi_1548 protein networkhttps://string-db.org/network/679935.Alfi_1548PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
Alfi_1549 protein networkhttps://string-db.org/network/679935.Alfi_1549Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
Alfi_1550 protein networkhttps://string-db.org/network/679935.Alfi_1550PFAM: Phenylalanine and histidine ammonia-lyase.
Alfi_1551 protein networkhttps://string-db.org/network/679935.Alfi_1551PFAM: Radical SAM superfamily; TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain.
Alfi_1552 protein networkhttps://string-db.org/network/679935.Alfi_1552PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
Alfi_1554 protein networkhttps://string-db.org/network/679935.Alfi_1554PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_1556 protein networkhttps://string-db.org/network/679935.Alfi_1556TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_1557 protein networkhttps://string-db.org/network/679935.Alfi_1557Hypothetical protein.
Alfi_1558 protein networkhttps://string-db.org/network/679935.Alfi_1558PFAM: F5/8 type C domain; Domain of unknown function (DUF1735); Glycosyl hydrolases family 18.
Alfi_1559 protein networkhttps://string-db.org/network/679935.Alfi_1559PFAM: Domain of unknown function (DUF1735).
Alfi_1560 protein networkhttps://string-db.org/network/679935.Alfi_1560N-acetyl-beta-hexosaminidase; PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
Alfi_1561 protein networkhttps://string-db.org/network/679935.Alfi_1561Hypothetical protein.
Alfi_1562 protein networkhttps://string-db.org/network/679935.Alfi_1562Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal.
Alfi_1563 protein networkhttps://string-db.org/network/679935.Alfi_1563Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal.
Alfi_1564 protein networkhttps://string-db.org/network/679935.Alfi_1564PFAM: Tetratricopeptide repeat.
Alfi_1565 protein networkhttps://string-db.org/network/679935.Alfi_1565Hypothetical protein.
Alfi_1566 protein networkhttps://string-db.org/network/679935.Alfi_1566PFAM: Protein of unknown function DUF58.
Alfi_1567 protein networkhttps://string-db.org/network/679935.Alfi_1567PFAM: ATPase family associated with various cellular activities (AAA).
Alfi_1568 protein networkhttps://string-db.org/network/679935.Alfi_1568DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
Alfi_1569 protein networkhttps://string-db.org/network/679935.Alfi_1569PFAM: Glycosyl transferase family 2.
nth protein networkhttps://string-db.org/network/679935.Alfi_1570Endonuclease III, DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various dama [...]
Alfi_1571 protein networkhttps://string-db.org/network/679935.Alfi_1571Hypothetical protein.
Alfi_1572 protein networkhttps://string-db.org/network/679935.Alfi_1572ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter.
Alfi_1573 protein networkhttps://string-db.org/network/679935.Alfi_1573Exopolyphosphatase-like enzyme; PFAM: DHH family; DHHA1 domain.
Alfi_1574 protein networkhttps://string-db.org/network/679935.Alfi_1574PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
Alfi_1575 protein networkhttps://string-db.org/network/679935.Alfi_1575PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein; Belongs to the UPF0324 family.
Alfi_1576 protein networkhttps://string-db.org/network/679935.Alfi_1576PFAM: Acetyltransferase (GNAT) family.
Alfi_1577 protein networkhttps://string-db.org/network/679935.Alfi_1577Hypothetical protein.
Alfi_1578 protein networkhttps://string-db.org/network/679935.Alfi_1578PFAM: Protein of unknown function (DUF1573).
Alfi_1579 protein networkhttps://string-db.org/network/679935.Alfi_1579Subtilisin-like serine protease; PFAM: Bacterial Ig-like domain (group 2); Subtilase family.
Alfi_1580 protein networkhttps://string-db.org/network/679935.Alfi_1580Hypothetical protein.
Alfi_1581 protein networkhttps://string-db.org/network/679935.Alfi_1581Leucine Rich Repeat (LRR)-containing protein.
Alfi_1582 protein networkhttps://string-db.org/network/679935.Alfi_1582Hypothetical protein.
Alfi_1583 protein networkhttps://string-db.org/network/679935.Alfi_1583Hypothetical protein.
Alfi_1584 protein networkhttps://string-db.org/network/679935.Alfi_1584RagB/SusD family protein; PFAM: SusD family.
Alfi_1585 protein networkhttps://string-db.org/network/679935.Alfi_1585TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1586 protein networkhttps://string-db.org/network/679935.Alfi_1586Hypothetical protein.
Alfi_1587 protein networkhttps://string-db.org/network/679935.Alfi_1587Hypothetical protein.
Alfi_1589 protein networkhttps://string-db.org/network/679935.Alfi_1589Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
Alfi_1590 protein networkhttps://string-db.org/network/679935.Alfi_1590PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
Alfi_1591 protein networkhttps://string-db.org/network/679935.Alfi_1591Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; Calcineurin-like phosphoesterase; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_1592 protein networkhttps://string-db.org/network/679935.Alfi_1592PFAM: PKD domain; manually curated.
Alfi_1593 protein networkhttps://string-db.org/network/679935.Alfi_1593Hypothetical protein.
Alfi_1594 protein networkhttps://string-db.org/network/679935.Alfi_1594DNA-binding domain-containing protein, AraC-type.
Alfi_1595 protein networkhttps://string-db.org/network/679935.Alfi_1595Putative Zn-dependent hydrolase of beta-lactamase fold protein.
Alfi_1597 protein networkhttps://string-db.org/network/679935.Alfi_1597DNA repair photolyase; PFAM: Radical SAM superfamily.
Alfi_1600 protein networkhttps://string-db.org/network/679935.Alfi_1600Hypothetical protein.
Alfi_1601 protein networkhttps://string-db.org/network/679935.Alfi_1601DNA primase; PFAM: CHC2 zinc finger.
Alfi_1603 protein networkhttps://string-db.org/network/679935.Alfi_1603Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family.
Alfi_1604 protein networkhttps://string-db.org/network/679935.Alfi_1604Hypothetical protein.
Alfi_1605 protein networkhttps://string-db.org/network/679935.Alfi_1605Putative ATPase (AAA+ superfamily).
Alfi_1606 protein networkhttps://string-db.org/network/679935.Alfi_1606Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1608 protein networkhttps://string-db.org/network/679935.Alfi_1608TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1609 protein networkhttps://string-db.org/network/679935.Alfi_1609PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain.
Alfi_1610 protein networkhttps://string-db.org/network/679935.Alfi_1610PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
Alfi_1612 protein networkhttps://string-db.org/network/679935.Alfi_1612Periplasmic protease; PFAM: Peptidase family S41.
Alfi_1613 protein networkhttps://string-db.org/network/679935.Alfi_1613Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
Alfi_1614 protein networkhttps://string-db.org/network/679935.Alfi_1614MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into ce [...]
Alfi_1615 protein networkhttps://string-db.org/network/679935.Alfi_16152-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family.
Alfi_1616 protein networkhttps://string-db.org/network/679935.Alfi_1616Hypothetical protein.
Alfi_1617 protein networkhttps://string-db.org/network/679935.Alfi_1617lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
trmD protein networkhttps://string-db.org/network/679935.Alfi_1618tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
Alfi_1619 protein networkhttps://string-db.org/network/679935.Alfi_1619TIGRFAM: methyltransferase, FkbM family.
Alfi_1620 protein networkhttps://string-db.org/network/679935.Alfi_1620Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
Alfi_1621 protein networkhttps://string-db.org/network/679935.Alfi_1621Esterase/lipase; PFAM: alpha/beta hydrolase fold.
Alfi_1622 protein networkhttps://string-db.org/network/679935.Alfi_1622Hypothetical protein.
Alfi_1623 protein networkhttps://string-db.org/network/679935.Alfi_1623PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase fa [...]
Alfi_1624 protein networkhttps://string-db.org/network/679935.Alfi_1624Lactoylglutathione lyase-like lyase.
Alfi_1625 protein networkhttps://string-db.org/network/679935.Alfi_1625PFAM: Protein of unknown function (DUF541).
Alfi_1626 protein networkhttps://string-db.org/network/679935.Alfi_1626PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric.
Alfi_1627 protein networkhttps://string-db.org/network/679935.Alfi_1627PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family.
dtd protein networkhttps://string-db.org/network/679935.Alfi_1628D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...]
Alfi_1629 protein networkhttps://string-db.org/network/679935.Alfi_1629PFAM: DNA/RNA non-specific endonuclease.
Alfi_1630 protein networkhttps://string-db.org/network/679935.Alfi_1630PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family.
Alfi_1631 protein networkhttps://string-db.org/network/679935.Alfi_1631Hypothetical protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).
priA protein networkhttps://string-db.org/network/679935.Alfi_1632Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA [...]
Alfi_1633 protein networkhttps://string-db.org/network/679935.Alfi_1633Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
Alfi_1634 protein networkhttps://string-db.org/network/679935.Alfi_1634Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamil [...]
Alfi_1635 protein networkhttps://string-db.org/network/679935.Alfi_1635Mg chelatase-related protein; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein.
murG protein networkhttps://string-db.org/network/679935.Alfi_1636Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid interme [...]
murC protein networkhttps://string-db.org/network/679935.Alfi_1637UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
Alfi_1638 protein networkhttps://string-db.org/network/679935.Alfi_1638Hypothetical protein.
ftsA protein networkhttps://string-db.org/network/679935.Alfi_1639Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
ftsZ protein networkhttps://string-db.org/network/679935.Alfi_1640Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
Alfi_1641 protein networkhttps://string-db.org/network/679935.Alfi_1641Gliding motility-associated protein GldE; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE.
Alfi_1642 protein networkhttps://string-db.org/network/679935.Alfi_1642Phosphopantetheinyl transferase component of siderophore synthetase; PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily.
Alfi_1643 protein networkhttps://string-db.org/network/679935.Alfi_1643Hypothetical protein.
Alfi_1644 protein networkhttps://string-db.org/network/679935.Alfi_1644Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
Alfi_1645 protein networkhttps://string-db.org/network/679935.Alfi_1645PFAM: Papain family cysteine protease; Peptidase C1-like family; Belongs to the peptidase C1 family.
topA protein networkhttps://string-db.org/network/679935.Alfi_1646DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one [...]
Alfi_1647 protein networkhttps://string-db.org/network/679935.Alfi_1647Hypothetical protein.
Alfi_1648 protein networkhttps://string-db.org/network/679935.Alfi_1648PFAM: Starch synthase catalytic domain.
queA-2 protein networkhttps://string-db.org/network/679935.Alfi_1649S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...]
truB protein networkhttps://string-db.org/network/679935.Alfi_1650tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
uppP protein networkhttps://string-db.org/network/679935.Alfi_1651Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
Alfi_1652 protein networkhttps://string-db.org/network/679935.Alfi_1652PFAM: Protein of unknown function (DUF3098).
Alfi_1653 protein networkhttps://string-db.org/network/679935.Alfi_1653Cell division protein; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
Alfi_1654 protein networkhttps://string-db.org/network/679935.Alfi_1654PFAM: Bacterial membrane protein YfhO.
Alfi_1655 protein networkhttps://string-db.org/network/679935.Alfi_1655Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
Alfi_1656 protein networkhttps://string-db.org/network/679935.Alfi_1656Fucose permease; PFAM: Major Facilitator Superfamily.
rplS protein networkhttps://string-db.org/network/679935.Alfi_1657Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
surE protein networkhttps://string-db.org/network/679935.Alfi_16585'-nucleotidase, exopolyphosphatase, 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
Alfi_1659 protein networkhttps://string-db.org/network/679935.Alfi_1659PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Alfi_1660 protein networkhttps://string-db.org/network/679935.Alfi_1660PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
Alfi_1661 protein networkhttps://string-db.org/network/679935.Alfi_1661Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin ( [...]
Alfi_1662 protein networkhttps://string-db.org/network/679935.Alfi_1662Hypothetical protein.
Alfi_1663 protein networkhttps://string-db.org/network/679935.Alfi_1663Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase; manually curated.
Alfi_1664 protein networkhttps://string-db.org/network/679935.Alfi_1664PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases.
efp protein networkhttps://string-db.org/network/679935.Alfi_1665Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...]
Alfi_1666 protein networkhttps://string-db.org/network/679935.Alfi_1666Hypothetical protein.
Alfi_1667 protein networkhttps://string-db.org/network/679935.Alfi_1667RagB/SusD family protein; PFAM: SusD family.
Alfi_1669 protein networkhttps://string-db.org/network/679935.Alfi_1669PFAM: Trehalase.
Alfi_1671 protein networkhttps://string-db.org/network/679935.Alfi_1671Hypothetical protein.
Alfi_1672 protein networkhttps://string-db.org/network/679935.Alfi_1672Hypothetical protein.
Alfi_1673 protein networkhttps://string-db.org/network/679935.Alfi_1673PFAM: Glycoside hydrolase 97.
Alfi_1674 protein networkhttps://string-db.org/network/679935.Alfi_1674Glycoside/pentoside/hexuronide transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter.
Alfi_1675 protein networkhttps://string-db.org/network/679935.Alfi_1675DNA-binding domain-containing protein, AraC-type.
Alfi_1676 protein networkhttps://string-db.org/network/679935.Alfi_1676Beta-mannanase; PFAM: Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
argH protein networkhttps://string-db.org/network/679935.Alfi_1677PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
Alfi_1678 protein networkhttps://string-db.org/network/679935.Alfi_1678Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
argB protein networkhttps://string-db.org/network/679935.Alfi_1679N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
Alfi_1680 protein networkhttps://string-db.org/network/679935.Alfi_1680PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransfera [...]
Alfi_1681 protein networkhttps://string-db.org/network/679935.Alfi_1681PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
argC protein networkhttps://string-db.org/network/679935.Alfi_1682N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
Alfi_1683 protein networkhttps://string-db.org/network/679935.Alfi_1683PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
Alfi_1684 protein networkhttps://string-db.org/network/679935.Alfi_1684Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family.
Alfi_1685 protein networkhttps://string-db.org/network/679935.Alfi_1685(p)ppGpp synthetase, RelA/SpoT family; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in [...]
Alfi_1686 protein networkhttps://string-db.org/network/679935.Alfi_1686PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family.
Alfi_1687 protein networkhttps://string-db.org/network/679935.Alfi_1687Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
Alfi_1688 protein networkhttps://string-db.org/network/679935.Alfi_1688PFAM: Acetyltransferase (GNAT) family.
Alfi_1689 protein networkhttps://string-db.org/network/679935.Alfi_1689Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucl [...]
Alfi_1690 protein networkhttps://string-db.org/network/679935.Alfi_1690Putative N-acetylglucosaminyltransferase; PFAM: Core-2/I-Branching enzyme.
Alfi_1691 protein networkhttps://string-db.org/network/679935.Alfi_1691MAC/perforin domain-containing protein; PFAM: MAC/Perforin domain.
Alfi_1692 protein networkhttps://string-db.org/network/679935.Alfi_1692Exonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; [...]
Alfi_1693 protein networkhttps://string-db.org/network/679935.Alfi_1693PFAM: TonB-dependent Receptor Plug Domain; Gram-negative bacterial tonB protein.
Alfi_1694 protein networkhttps://string-db.org/network/679935.Alfi_1694O(6)-alkylguanine repair protein YbaZ; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.
prfA protein networkhttps://string-db.org/network/679935.Alfi_1695Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
Alfi_1696 protein networkhttps://string-db.org/network/679935.Alfi_1696Esterase/lipase; PFAM: Prolyl oligopeptidase family.
leuS protein networkhttps://string-db.org/network/679935.Alfi_1697PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class [...]
Alfi_1698 protein networkhttps://string-db.org/network/679935.Alfi_1698Hypothetical protein.
rpsL protein networkhttps://string-db.org/network/679935.Alfi_1699SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S a [...]
rpsG protein networkhttps://string-db.org/network/679935.Alfi_1700Ribosomal protein S7, bacterial/organelle; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at [...]
fusA protein networkhttps://string-db.org/network/679935.Alfi_1701Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PR [...]
rpsJ protein networkhttps://string-db.org/network/679935.Alfi_1702Ribosomal protein S10, bacterial/organelle; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
rplC protein networkhttps://string-db.org/network/679935.Alfi_1703LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ri [...]
rplD protein networkhttps://string-db.org/network/679935.Alfi_170450S ribosomal protein L4, bacterial/organelle; Forms part of the polypeptide exit tunnel.
rplW protein networkhttps://string-db.org/network/679935.Alfi_1705Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...]
rplB protein networkhttps://string-db.org/network/679935.Alfi_1706Ribosomal protein L2, bacterial/organellar; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide b [...]
rpsS protein networkhttps://string-db.org/network/679935.Alfi_1707SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/679935.Alfi_1708LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wa [...]
rpsC protein networkhttps://string-db.org/network/679935.Alfi_1709Ribosomal protein S3, bacterial type; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 [...]
rplP protein networkhttps://string-db.org/network/679935.Alfi_1710Ribosomal protein L16, bacterial/organelle; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpmC protein networkhttps://string-db.org/network/679935.Alfi_1711PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
rpsQ protein networkhttps://string-db.org/network/679935.Alfi_171230S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplN protein networkhttps://string-db.org/network/679935.Alfi_1713LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rplX protein networkhttps://string-db.org/network/679935.Alfi_1714Ribosomal protein L24, bacterial/organelle; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplE protein networkhttps://string-db.org/network/679935.Alfi_1715Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...]
rpsN protein networkhttps://string-db.org/network/679935.Alfi_1716Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the univer [...]
Alfi_1717 protein networkhttps://string-db.org/network/679935.Alfi_1717Hypothetical protein.
rpsH protein networkhttps://string-db.org/network/679935.Alfi_1718Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...]
rplF protein networkhttps://string-db.org/network/679935.Alfi_1719Ribosomal protein L6, bacterial type; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, an [...]
rplR protein networkhttps://string-db.org/network/679935.Alfi_1720LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuber [...]
rpsE protein networkhttps://string-db.org/network/679935.Alfi_1721Ribosomal protein S5, bacterial/organelle type; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal rib [...]
rpmD protein networkhttps://string-db.org/network/679935.Alfi_1722PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle.
rplO protein networkhttps://string-db.org/network/679935.Alfi_1723LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/679935.Alfi_1724Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral [...]
map protein networkhttps://string-db.org/network/679935.Alfi_1725Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
infA protein networkhttps://string-db.org/network/679935.Alfi_1726Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
rpmJ protein networkhttps://string-db.org/network/679935.Alfi_1727PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.
rpsM protein networkhttps://string-db.org/network/679935.Alfi_172830S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpsK protein networkhttps://string-db.org/network/679935.Alfi_172930S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsD protein networkhttps://string-db.org/network/679935.Alfi_1730Ribosomal protein S4, bacterial/organelle type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpoA protein networkhttps://string-db.org/network/679935.Alfi_1731DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/679935.Alfi_1732PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17.
Alfi_1733 protein networkhttps://string-db.org/network/679935.Alfi_1733Transposase; PFAM: Integrase core domain; manually curated.
Alfi_1734 protein networkhttps://string-db.org/network/679935.Alfi_1734Transposase; Manually curated.
Alfi_1735 protein networkhttps://string-db.org/network/679935.Alfi_1735Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
Alfi_1736 protein networkhttps://string-db.org/network/679935.Alfi_1736Hypothetical protein.
Alfi_1737 protein networkhttps://string-db.org/network/679935.Alfi_1737Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_1738 protein networkhttps://string-db.org/network/679935.Alfi_1738RagB/SusD family protein; PFAM: SusD family.
Alfi_1739 protein networkhttps://string-db.org/network/679935.Alfi_1739TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1740 protein networkhttps://string-db.org/network/679935.Alfi_1740Hypothetical protein.
Alfi_1741 protein networkhttps://string-db.org/network/679935.Alfi_1741Ribulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase.
Alfi_1742 protein networkhttps://string-db.org/network/679935.Alfi_1742Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
Alfi_1743 protein networkhttps://string-db.org/network/679935.Alfi_1743FAD binding protein.
Alfi_1744 protein networkhttps://string-db.org/network/679935.Alfi_1744Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_1745 protein networkhttps://string-db.org/network/679935.Alfi_1745Hypothetical protein.
tpiA protein networkhttps://string-db.org/network/679935.Alfi_1746Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]
lysS protein networkhttps://string-db.org/network/679935.Alfi_1747lysyl-tRNA synthetase (class II); PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belon [...]
Alfi_1748 protein networkhttps://string-db.org/network/679935.Alfi_1748PFAM: PAP2 superfamily.
Alfi_1749 protein networkhttps://string-db.org/network/679935.Alfi_1749Putative membrane protein involved in D-alanine export; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
Alfi_1750 protein networkhttps://string-db.org/network/679935.Alfi_1750Hypothetical protein.
Alfi_1751 protein networkhttps://string-db.org/network/679935.Alfi_1751Putative Zn-dependent protease; PFAM: Putative neutral zinc metallopeptidase.
Alfi_1752 protein networkhttps://string-db.org/network/679935.Alfi_1752Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Alfi_1753 protein networkhttps://string-db.org/network/679935.Alfi_1753ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
menG protein networkhttps://string-db.org/network/679935.Alfi_1754Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
Alfi_1755 protein networkhttps://string-db.org/network/679935.Alfi_1755Hypothetical protein.
Alfi_1756 protein networkhttps://string-db.org/network/679935.Alfi_1756Hypothetical protein.
Alfi_1757 protein networkhttps://string-db.org/network/679935.Alfi_1757Hypothetical protein.
Alfi_1758 protein networkhttps://string-db.org/network/679935.Alfi_1758Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
Alfi_1759 protein networkhttps://string-db.org/network/679935.Alfi_1759PFAM: Radical SAM superfamily; TIGRFAM: putative DNA modification/repair radical SAM protein.
Alfi_1760 protein networkhttps://string-db.org/network/679935.Alfi_1760TIGRFAM: probable DNA metabolism protein.
Alfi_1762 protein networkhttps://string-db.org/network/679935.Alfi_1762Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen.
Alfi_1763 protein networkhttps://string-db.org/network/679935.Alfi_1763Hypothetical protein; PFAM: Family of unknown function (DUF490); AsmA family.
dinB protein networkhttps://string-db.org/network/679935.Alfi_1764nucleotidyltransferase/DNA polymerase involved in DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, [...]
Alfi_1765 protein networkhttps://string-db.org/network/679935.Alfi_1765PFAM: Nitroreductase family.
Alfi_1766 protein networkhttps://string-db.org/network/679935.Alfi_1766Tryptophan-rich sensory protein; PFAM: TspO/MBR family.
Alfi_1767 protein networkhttps://string-db.org/network/679935.Alfi_1767Hypothetical protein.
Alfi_1768 protein networkhttps://string-db.org/network/679935.Alfi_1768Glycosidase; PFAM: Alpha amylase, catalytic domain; manually curated.
Alfi_1769 protein networkhttps://string-db.org/network/679935.Alfi_1769PFAM: Manganese containing catalase.
Alfi_1770 protein networkhttps://string-db.org/network/679935.Alfi_1770Hypothetical protein.
Alfi_1771 protein networkhttps://string-db.org/network/679935.Alfi_1771Hypothetical protein.
Alfi_1772 protein networkhttps://string-db.org/network/679935.Alfi_1772Hypothetical protein.
Alfi_1773 protein networkhttps://string-db.org/network/679935.Alfi_1773Putative membrane protein; PFAM: VIT family.
Alfi_1774 protein networkhttps://string-db.org/network/679935.Alfi_1774PFAM: Protein of unknown function (DUF2874).
Alfi_1775 protein networkhttps://string-db.org/network/679935.Alfi_1775Hypothetical protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
Alfi_1776 protein networkhttps://string-db.org/network/679935.Alfi_1776Hypothetical protein.
Alfi_1777 protein networkhttps://string-db.org/network/679935.Alfi_1777Putative membrane protein; PFAM: Transglycosylase associated protein.
Alfi_1778 protein networkhttps://string-db.org/network/679935.Alfi_1778Pullulanase, type I; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 famil [...]
Alfi_1779 protein networkhttps://string-db.org/network/679935.Alfi_1779PFAM: Mechanosensitive ion channel.
Alfi_1780 protein networkhttps://string-db.org/network/679935.Alfi_1780Hypothetical protein.
Alfi_1782 protein networkhttps://string-db.org/network/679935.Alfi_1782Hypothetical protein.
Alfi_1783 protein networkhttps://string-db.org/network/679935.Alfi_1783Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
proS protein networkhttps://string-db.org/network/679935.Alfi_1784prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
Alfi_1785 protein networkhttps://string-db.org/network/679935.Alfi_1785PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
Alfi_1786 protein networkhttps://string-db.org/network/679935.Alfi_1786PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_1787 protein networkhttps://string-db.org/network/679935.Alfi_1787Hypothetical protein.
Alfi_1788 protein networkhttps://string-db.org/network/679935.Alfi_1788Lactoylglutathione lyase-like lyase.
Alfi_1789 protein networkhttps://string-db.org/network/679935.Alfi_1789PFAM: Protein of unknown function, DUF488.
Alfi_1790 protein networkhttps://string-db.org/network/679935.Alfi_1790Hypothetical protein.
Alfi_1791 protein networkhttps://string-db.org/network/679935.Alfi_1791Putative Zn-dependent hydrolase of beta-lactamase fold protein.
Alfi_1794 protein networkhttps://string-db.org/network/679935.Alfi_1794Hypothetical protein.
Alfi_1795 protein networkhttps://string-db.org/network/679935.Alfi_1795Penicillin V acylase-like amidase; PFAM: Linear amide C-N hydrolases, choloylglycine hydrolase family.
Alfi_1796 protein networkhttps://string-db.org/network/679935.Alfi_1796Hypothetical protein.
Alfi_1797 protein networkhttps://string-db.org/network/679935.Alfi_1797Hypothetical protein.
Alfi_1798 protein networkhttps://string-db.org/network/679935.Alfi_1798Hypothetical protein; Manually curated.
Alfi_1799 protein networkhttps://string-db.org/network/679935.Alfi_1799Hypothetical protein.
Alfi_1800 protein networkhttps://string-db.org/network/679935.Alfi_1800PFAM: Fic/DOC family.
Alfi_1801 protein networkhttps://string-db.org/network/679935.Alfi_1801PFAM: MORN repeat variant.
Alfi_1802 protein networkhttps://string-db.org/network/679935.Alfi_1802PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_1803 protein networkhttps://string-db.org/network/679935.Alfi_1803Hypothetical protein; Manually curated.
Alfi_1804 protein networkhttps://string-db.org/network/679935.Alfi_1804PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
Alfi_1805 protein networkhttps://string-db.org/network/679935.Alfi_1805PFAM: Type I restriction modification DNA specificity domain.
Alfi_1807 protein networkhttps://string-db.org/network/679935.Alfi_1807PFAM: Transposase, Mutator family.
Alfi_1809 protein networkhttps://string-db.org/network/679935.Alfi_1809Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1811 protein networkhttps://string-db.org/network/679935.Alfi_1811PFAM: FRG domain.
Alfi_1812 protein networkhttps://string-db.org/network/679935.Alfi_1812Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
Alfi_1813 protein networkhttps://string-db.org/network/679935.Alfi_1813PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_1814 protein networkhttps://string-db.org/network/679935.Alfi_1814PFAM: Protein of unknown function (DUF3408).
Alfi_1815 protein networkhttps://string-db.org/network/679935.Alfi_1815Hypothetical protein.
Alfi_1816 protein networkhttps://string-db.org/network/679935.Alfi_1816Transposase; PFAM: Integrase core domain.
Alfi_1817 protein networkhttps://string-db.org/network/679935.Alfi_1817PFAM: Bacterial mobilisation protein (MobC).
Alfi_1820 protein networkhttps://string-db.org/network/679935.Alfi_1820PFAM: Alpha-L-fucosidase.
Alfi_1821 protein networkhttps://string-db.org/network/679935.Alfi_1821Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Bacterial Ig-like domain (group 1).
cutC-2 protein networkhttps://string-db.org/network/679935.Alfi_1822Uncharacterized protein involved in copper resistance; Participates in the control of copper homeostasis. Belongs to the CutC family.
Alfi_1824 protein networkhttps://string-db.org/network/679935.Alfi_1824Hypothetical protein.
Alfi_1825 protein networkhttps://string-db.org/network/679935.Alfi_1825Hypothetical protein.
Alfi_1826 protein networkhttps://string-db.org/network/679935.Alfi_1826TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1827 protein networkhttps://string-db.org/network/679935.Alfi_1827RagB/SusD family protein; PFAM: SusD family.
Alfi_1828 protein networkhttps://string-db.org/network/679935.Alfi_1828Hypothetical protein.
Alfi_1829 protein networkhttps://string-db.org/network/679935.Alfi_1829Subtilisin-like serine protease; PFAM: Subtilase family.
Alfi_1830 protein networkhttps://string-db.org/network/679935.Alfi_1830Hypothetical protein.
Alfi_1831 protein networkhttps://string-db.org/network/679935.Alfi_1831Hypothetical protein.
Alfi_1832 protein networkhttps://string-db.org/network/679935.Alfi_1832PFAM: RteC protein.
Alfi_1833 protein networkhttps://string-db.org/network/679935.Alfi_1833Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1835 protein networkhttps://string-db.org/network/679935.Alfi_1835FAD-dependent dehydrogenase; PFAM: FAD binding domain; FAD dependent oxidoreductase.
Alfi_1836 protein networkhttps://string-db.org/network/679935.Alfi_1836Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
Alfi_1837 protein networkhttps://string-db.org/network/679935.Alfi_1837PFAM: Glycosyl transferase family 2.
Alfi_1838 protein networkhttps://string-db.org/network/679935.Alfi_1838PFAM: Glycosyl transferase family 2; Galactosyltransferase.
Alfi_1839 protein networkhttps://string-db.org/network/679935.Alfi_1839PFAM: Protein of unknown function (DUF3298).
Alfi_1841 protein networkhttps://string-db.org/network/679935.Alfi_1841PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
xerC-2 protein networkhttps://string-db.org/network/679935.Alfi_1842Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to con [...]
Alfi_1843 protein networkhttps://string-db.org/network/679935.Alfi_1843PFAM: Putative esterase.
Alfi_1844 protein networkhttps://string-db.org/network/679935.Alfi_1844Conserved protein of DIM6/NTAB family; PFAM: Flavin reductase like domain.
Alfi_1845 protein networkhttps://string-db.org/network/679935.Alfi_1845Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
Alfi_1846 protein networkhttps://string-db.org/network/679935.Alfi_1846Large extracellular alpha-helical protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; Al [...]
Alfi_1847 protein networkhttps://string-db.org/network/679935.Alfi_1847PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C.
Alfi_1848 protein networkhttps://string-db.org/network/679935.Alfi_1848Hypothetical protein.
Alfi_1849 protein networkhttps://string-db.org/network/679935.Alfi_1849Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain.
Alfi_1850 protein networkhttps://string-db.org/network/679935.Alfi_1850Arylsulfatase A family protein; PFAM: Sulfatase.
Alfi_1851 protein networkhttps://string-db.org/network/679935.Alfi_1851Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
Alfi_1852 protein networkhttps://string-db.org/network/679935.Alfi_1852Arylsulfatase A family protein; PFAM: Sulfatase.
Alfi_1853 protein networkhttps://string-db.org/network/679935.Alfi_1853Beta-galactosidase/beta-glucuronidase; PFAM: Beta galactosidase small chain.
Alfi_1854 protein networkhttps://string-db.org/network/679935.Alfi_1854PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase.
Alfi_1856 protein networkhttps://string-db.org/network/679935.Alfi_1856Hypothetical protein.
Alfi_1857 protein networkhttps://string-db.org/network/679935.Alfi_1857PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
Alfi_1859 protein networkhttps://string-db.org/network/679935.Alfi_1859Hypothetical protein; PFAM: Fic/DOC family; TIGRFAM: DNA binding domain, excisionase family.
Alfi_1860 protein networkhttps://string-db.org/network/679935.Alfi_1860PFAM: Conjugal transfer protein.
Alfi_1861 protein networkhttps://string-db.org/network/679935.Alfi_1861PFAM: Protein of unknown function (DUF3714).
Alfi_1862 protein networkhttps://string-db.org/network/679935.Alfi_1862Hypothetical protein.
Alfi_1863 protein networkhttps://string-db.org/network/679935.Alfi_1863Hypothetical protein.
Alfi_1864 protein networkhttps://string-db.org/network/679935.Alfi_1864PFAM: VirB8 protein.
Alfi_1865 protein networkhttps://string-db.org/network/679935.Alfi_1865Hypothetical protein.
Alfi_1866 protein networkhttps://string-db.org/network/679935.Alfi_1866Hypothetical protein.
Alfi_1867 protein networkhttps://string-db.org/network/679935.Alfi_1867Hypothetical protein.
Alfi_1868 protein networkhttps://string-db.org/network/679935.Alfi_1868Hypothetical protein.
Alfi_1869 protein networkhttps://string-db.org/network/679935.Alfi_1869Hypothetical protein.
Alfi_1870 protein networkhttps://string-db.org/network/679935.Alfi_1870ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_1871 protein networkhttps://string-db.org/network/679935.Alfi_1871Hypothetical protein.
Alfi_1872 protein networkhttps://string-db.org/network/679935.Alfi_1872PFAM: Relaxase/Mobilisation nuclease domain.
Alfi_1873 protein networkhttps://string-db.org/network/679935.Alfi_1873Hypothetical protein.
Alfi_1874 protein networkhttps://string-db.org/network/679935.Alfi_1874Hypothetical protein.
Alfi_1875 protein networkhttps://string-db.org/network/679935.Alfi_1875Hypothetical protein.
Alfi_1877 protein networkhttps://string-db.org/network/679935.Alfi_1877Hypothetical protein.
Alfi_1878 protein networkhttps://string-db.org/network/679935.Alfi_1878Hypothetical protein.
Alfi_1879 protein networkhttps://string-db.org/network/679935.Alfi_1879Hypothetical protein.
Alfi_1880 protein networkhttps://string-db.org/network/679935.Alfi_1880Hypothetical protein.
Alfi_1881 protein networkhttps://string-db.org/network/679935.Alfi_1881Type IV secretory pathway, VirD4 component.
Alfi_1882 protein networkhttps://string-db.org/network/679935.Alfi_1882Hypothetical protein.
Alfi_1883 protein networkhttps://string-db.org/network/679935.Alfi_1883Hypothetical protein.
Alfi_1884 protein networkhttps://string-db.org/network/679935.Alfi_1884Hypothetical protein.
Alfi_1885 protein networkhttps://string-db.org/network/679935.Alfi_1885Hypothetical protein.
Alfi_1886 protein networkhttps://string-db.org/network/679935.Alfi_1886Hypothetical protein.
Alfi_1887 protein networkhttps://string-db.org/network/679935.Alfi_1887Hypothetical protein.
Alfi_1888 protein networkhttps://string-db.org/network/679935.Alfi_1888Hypothetical protein.
Alfi_1889 protein networkhttps://string-db.org/network/679935.Alfi_1889Hypothetical protein.
Alfi_1890 protein networkhttps://string-db.org/network/679935.Alfi_1890ORF6N domain-containing protein; PFAM: ORF6N domain.
Alfi_1891 protein networkhttps://string-db.org/network/679935.Alfi_1891Hypothetical protein.
Alfi_1892 protein networkhttps://string-db.org/network/679935.Alfi_1892Hypothetical protein; Manually curated.
Alfi_1894 protein networkhttps://string-db.org/network/679935.Alfi_1894Hypothetical protein.
Alfi_1895 protein networkhttps://string-db.org/network/679935.Alfi_1895Hypothetical protein.
Alfi_1896 protein networkhttps://string-db.org/network/679935.Alfi_1896Hypothetical protein.
Alfi_1897 protein networkhttps://string-db.org/network/679935.Alfi_1897ORF6N domain-containing protein; PFAM: ORF6N domain; manually curated.
Alfi_1898 protein networkhttps://string-db.org/network/679935.Alfi_1898Hypothetical protein.
Alfi_1899 protein networkhttps://string-db.org/network/679935.Alfi_1899Hypothetical protein.
Alfi_1900 protein networkhttps://string-db.org/network/679935.Alfi_1900Hypothetical protein.
Alfi_1901 protein networkhttps://string-db.org/network/679935.Alfi_1901Hypothetical protein.
Alfi_1902 protein networkhttps://string-db.org/network/679935.Alfi_1902Hypothetical protein.
Alfi_1904 protein networkhttps://string-db.org/network/679935.Alfi_1904Hypothetical protein.
Alfi_1905 protein networkhttps://string-db.org/network/679935.Alfi_1905PFAM: Protein of unknown function (DUF1812).
Alfi_1906 protein networkhttps://string-db.org/network/679935.Alfi_1906Hypothetical protein.
Alfi_1907 protein networkhttps://string-db.org/network/679935.Alfi_1907Hypothetical protein.
Alfi_1908 protein networkhttps://string-db.org/network/679935.Alfi_1908PFAM: Zinc finger found in FPG and IleRS.
Alfi_1909 protein networkhttps://string-db.org/network/679935.Alfi_1909PFAM: Protein of unknown function (DUF3575).
Alfi_1910 protein networkhttps://string-db.org/network/679935.Alfi_1910Hypothetical protein.
Alfi_1911 protein networkhttps://string-db.org/network/679935.Alfi_1911Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
Alfi_1913 protein networkhttps://string-db.org/network/679935.Alfi_1913Hypothetical protein.
Alfi_1914 protein networkhttps://string-db.org/network/679935.Alfi_1914Hypothetical protein.
Alfi_1915 protein networkhttps://string-db.org/network/679935.Alfi_1915Hypothetical protein.
Alfi_1916 protein networkhttps://string-db.org/network/679935.Alfi_1916ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_1917 protein networkhttps://string-db.org/network/679935.Alfi_1917PFAM: Initiator Replication protein.
Alfi_1918 protein networkhttps://string-db.org/network/679935.Alfi_1918Hypothetical protein.
Alfi_1920 protein networkhttps://string-db.org/network/679935.Alfi_1920Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_1921 protein networkhttps://string-db.org/network/679935.Alfi_1921Site-specific recombinase XerD; PFAM: Phage integrase family.
Alfi_1922 protein networkhttps://string-db.org/network/679935.Alfi_1922Hypothetical protein.
Alfi_1923 protein networkhttps://string-db.org/network/679935.Alfi_1923PFAM: Domain of unknown function (DUF1814).
Alfi_1924 protein networkhttps://string-db.org/network/679935.Alfi_1924Hypothetical protein.
Alfi_1925 protein networkhttps://string-db.org/network/679935.Alfi_1925Hypothetical protein.
Alfi_1926 protein networkhttps://string-db.org/network/679935.Alfi_1926Hypothetical protein.
Alfi_1928 protein networkhttps://string-db.org/network/679935.Alfi_1928PFAM: Bacterial mobilisation protein (MobC).
Alfi_1929 protein networkhttps://string-db.org/network/679935.Alfi_1929Type IV secretory pathway, VirD2 component (relaxase); PFAM: Relaxase/Mobilisation nuclease domain.
Alfi_1930 protein networkhttps://string-db.org/network/679935.Alfi_1930Hypothetical protein.
Alfi_1931 protein networkhttps://string-db.org/network/679935.Alfi_1931PFAM: Glycoside hydrolase 97.
Alfi_1932 protein networkhttps://string-db.org/network/679935.Alfi_1932Glycosidase; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain; Belongs to the glycosyl hydrolase 13 family.
Alfi_1933 protein networkhttps://string-db.org/network/679935.Alfi_1933Glycosidase; PFAM: Alpha amylase, catalytic domain.
Alfi_1934 protein networkhttps://string-db.org/network/679935.Alfi_1934Glycosidase; PFAM: Alpha amylase, catalytic domain.
Alfi_1935 protein networkhttps://string-db.org/network/679935.Alfi_1935Hypothetical protein.
Alfi_1936 protein networkhttps://string-db.org/network/679935.Alfi_1936RagB/SusD family protein; PFAM: SusD family.
Alfi_1937 protein networkhttps://string-db.org/network/679935.Alfi_1937TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_1938 protein networkhttps://string-db.org/network/679935.Alfi_1938PFAM: Major Facilitator Superfamily.
Alfi_1939 protein networkhttps://string-db.org/network/679935.Alfi_1939Hypothetical protein.
Alfi_1940 protein networkhttps://string-db.org/network/679935.Alfi_1940Putative regulator of cell autolysis; PFAM: Histidine kinase.
Alfi_1941 protein networkhttps://string-db.org/network/679935.Alfi_1941Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
Alfi_1942 protein networkhttps://string-db.org/network/679935.Alfi_19424-alpha-glucanotransferase; PFAM: Starch binding domain; 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
lspA protein networkhttps://string-db.org/network/679935.Alfi_1945Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
Alfi_1952 protein networkhttps://string-db.org/network/679935.Alfi_1952PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Belongs to the FPG family.
Alfi_1953 protein networkhttps://string-db.org/network/679935.Alfi_1953Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
Alfi_1954 protein networkhttps://string-db.org/network/679935.Alfi_1954Hypothetical protein.
Alfi_1955 protein networkhttps://string-db.org/network/679935.Alfi_1955Putative hydrolase or acyltransferase of alpha/beta superfamily.
Alfi_1956 protein networkhttps://string-db.org/network/679935.Alfi_1956Hypothetical protein.
dapF protein networkhttps://string-db.org/network/679935.Alfi_1957Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
Alfi_1958 protein networkhttps://string-db.org/network/679935.Alfi_1958PFAM: Nitroreductase family; Belongs to the flavin oxidoreductase frp family.
Alfi_1959 protein networkhttps://string-db.org/network/679935.Alfi_1959Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat; Surface antigen.
Alfi_1960 protein networkhttps://string-db.org/network/679935.Alfi_1960DNA-binding domain-containing protein, AraC-type.
Alfi_1961 protein networkhttps://string-db.org/network/679935.Alfi_1961PFAM: Outer membrane protein (OmpH-like).
Alfi_1962 protein networkhttps://string-db.org/network/679935.Alfi_1962PFAM: Outer membrane protein (OmpH-like).
Alfi_1963 protein networkhttps://string-db.org/network/679935.Alfi_1963PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
Alfi_1964 protein networkhttps://string-db.org/network/679935.Alfi_1964Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
nadK protein networkhttps://string-db.org/network/679935.Alfi_1965Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-h [...]
pdxJ protein networkhttps://string-db.org/network/679935.Alfi_1966Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amin [...]
Alfi_1967 protein networkhttps://string-db.org/network/679935.Alfi_1967Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
Alfi_1968 protein networkhttps://string-db.org/network/679935.Alfi_1968tRNA nucleotidyltransferase/poly(A) polymerase; PFAM: HD domain; Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
Alfi_1969 protein networkhttps://string-db.org/network/679935.Alfi_1969DMT(drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family.
Alfi_1970 protein networkhttps://string-db.org/network/679935.Alfi_1970DMT(drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family.
Alfi_1971 protein networkhttps://string-db.org/network/679935.Alfi_1971PFAM: Thioesterase superfamily.
Alfi_1972 protein networkhttps://string-db.org/network/679935.Alfi_1972PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
Alfi_1973 protein networkhttps://string-db.org/network/679935.Alfi_1973Lactoylglutathione lyase-like lyase.
Alfi_1974 protein networkhttps://string-db.org/network/679935.Alfi_1974PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family.
Alfi_1975 protein networkhttps://string-db.org/network/679935.Alfi_1975Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
Alfi_1976 protein networkhttps://string-db.org/network/679935.Alfi_1976Rubrerythrin.
pgi protein networkhttps://string-db.org/network/679935.Alfi_1977PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
Alfi_1978 protein networkhttps://string-db.org/network/679935.Alfi_1978PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase fam [...]
Alfi_1979 protein networkhttps://string-db.org/network/679935.Alfi_1979PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family.
Alfi_1980 protein networkhttps://string-db.org/network/679935.Alfi_1980PFAM: rod shape-determining protein MreC.
Alfi_1981 protein networkhttps://string-db.org/network/679935.Alfi_1981Hypothetical protein.
Alfi_1982 protein networkhttps://string-db.org/network/679935.Alfi_1982Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protei [...]
Alfi_1983 protein networkhttps://string-db.org/network/679935.Alfi_1983Bacterial cell division membrane protein; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Belongs to the SEDS family.
Alfi_1984 protein networkhttps://string-db.org/network/679935.Alfi_1984Plasma-membrane calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRF [...]
Alfi_1985 protein networkhttps://string-db.org/network/679935.Alfi_1985Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
Alfi_1986 protein networkhttps://string-db.org/network/679935.Alfi_1986PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
Alfi_1987 protein networkhttps://string-db.org/network/679935.Alfi_1987PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
Alfi_1989 protein networkhttps://string-db.org/network/679935.Alfi_1989Hypothetical protein.
gcvT protein networkhttps://string-db.org/network/679935.Alfi_1990Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
Alfi_1991 protein networkhttps://string-db.org/network/679935.Alfi_1991Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
Alfi_1992 protein networkhttps://string-db.org/network/679935.Alfi_1992Hypothetical protein.
Alfi_1993 protein networkhttps://string-db.org/network/679935.Alfi_1993Hypothetical protein.
Alfi_1994 protein networkhttps://string-db.org/network/679935.Alfi_1994Hypothetical protein.
Alfi_1995 protein networkhttps://string-db.org/network/679935.Alfi_1995Hypothetical protein.
Alfi_1996 protein networkhttps://string-db.org/network/679935.Alfi_1996PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_1997 protein networkhttps://string-db.org/network/679935.Alfi_1997PFAM: S1/P1 Nuclease.
Alfi_1998 protein networkhttps://string-db.org/network/679935.Alfi_1998RagB/SusD family protein; PFAM: SusD family; manually curated.
Alfi_1999 protein networkhttps://string-db.org/network/679935.Alfi_1999TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer [...]
Alfi_2000 protein networkhttps://string-db.org/network/679935.Alfi_2000Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_2001 protein networkhttps://string-db.org/network/679935.Alfi_2001PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_2002 protein networkhttps://string-db.org/network/679935.Alfi_2002Putative HD superfamily hydrolase; PFAM: HD domain.
Alfi_2003 protein networkhttps://string-db.org/network/679935.Alfi_2003PFAM: Protein of unknown function (DUF1212).
Alfi_2004 protein networkhttps://string-db.org/network/679935.Alfi_2004Hypothetical protein.
Alfi_2005 protein networkhttps://string-db.org/network/679935.Alfi_2005Hypothetical protein.
rny protein networkhttps://string-db.org/network/679935.Alfi_2006Hypothetical protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
Alfi_2007 protein networkhttps://string-db.org/network/679935.Alfi_2007PFAM: Cell division protein ZapA.
Alfi_2008 protein networkhttps://string-db.org/network/679935.Alfi_2008Hypothetical protein.
rimO protein networkhttps://string-db.org/network/679935.Alfi_2009SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
Alfi_2011 protein networkhttps://string-db.org/network/679935.Alfi_2011Hypothetical protein.
Alfi_2012 protein networkhttps://string-db.org/network/679935.Alfi_2012Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2013 protein networkhttps://string-db.org/network/679935.Alfi_2013RagB/SusD family protein; PFAM: SusD family.
Alfi_2014 protein networkhttps://string-db.org/network/679935.Alfi_2014TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
ftsY protein networkhttps://string-db.org/network/679935.Alfi_2015Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
Alfi_2016 protein networkhttps://string-db.org/network/679935.Alfi_2016Hypothetical protein.
Alfi_2017 protein networkhttps://string-db.org/network/679935.Alfi_2017Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_2018 protein networkhttps://string-db.org/network/679935.Alfi_2018Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_2019 protein networkhttps://string-db.org/network/679935.Alfi_2019Hypothetical protein.
rpmG protein networkhttps://string-db.org/network/679935.Alfi_2020PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.
rpmB protein networkhttps://string-db.org/network/679935.Alfi_2021PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
Alfi_2022 protein networkhttps://string-db.org/network/679935.Alfi_2022PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
Alfi_2023 protein networkhttps://string-db.org/network/679935.Alfi_2023PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
Alfi_2024 protein networkhttps://string-db.org/network/679935.Alfi_2024PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal d [...]
pyrD protein networkhttps://string-db.org/network/679935.Alfi_2025Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
Alfi_2026 protein networkhttps://string-db.org/network/679935.Alfi_2026Phosphoglycerate dehydrogenase-like oxidoreductase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
Alfi_2027 protein networkhttps://string-db.org/network/679935.Alfi_2027Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase; PFAM: Arginase family; Belongs to the arginase family.
nhaA protein networkhttps://string-db.org/network/679935.Alfi_2028Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
Alfi_2029 protein networkhttps://string-db.org/network/679935.Alfi_2029PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase.
Alfi_2030 protein networkhttps://string-db.org/network/679935.Alfi_2030PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase.
Alfi_2031 protein networkhttps://string-db.org/network/679935.Alfi_2031PFAM: Acetyltransferase (GNAT) family.
Alfi_2032 protein networkhttps://string-db.org/network/679935.Alfi_2032PFAM: Protein of unknown function (DUF3127).
Alfi_2034 protein networkhttps://string-db.org/network/679935.Alfi_2034PFAM: S1/P1 Nuclease.
Alfi_2035 protein networkhttps://string-db.org/network/679935.Alfi_2035PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
Alfi_2036 protein networkhttps://string-db.org/network/679935.Alfi_2036Hypothetical protein.
Alfi_2037 protein networkhttps://string-db.org/network/679935.Alfi_2037Hypothetical protein.
Alfi_2038 protein networkhttps://string-db.org/network/679935.Alfi_2038Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
tuf protein networkhttps://string-db.org/network/679935.Alfi_2042Translation elongation factor TU; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
Alfi_2044 protein networkhttps://string-db.org/network/679935.Alfi_2044PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Belongs to the SecE/SEC61-gamma family.
nusG protein networkhttps://string-db.org/network/679935.Alfi_2045Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.
rplK protein networkhttps://string-db.org/network/679935.Alfi_2046LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
rplA protein networkhttps://string-db.org/network/679935.Alfi_2047Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
Alfi_2048 protein networkhttps://string-db.org/network/679935.Alfi_2048PFAM: Ribosomal protein L10.
rplL protein networkhttps://string-db.org/network/679935.Alfi_2049LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bact [...]
rpoB protein networkhttps://string-db.org/network/679935.Alfi_2050DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoC protein networkhttps://string-db.org/network/679935.Alfi_2051DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
Alfi_2052 protein networkhttps://string-db.org/network/679935.Alfi_2052L-serine deaminase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form.
Alfi_2054 protein networkhttps://string-db.org/network/679935.Alfi_2054Long-chain fatty acid transport protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
Alfi_2055 protein networkhttps://string-db.org/network/679935.Alfi_2055PFAM: Aminotransferase class I and II.
Alfi_2056 protein networkhttps://string-db.org/network/679935.Alfi_2056PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
Alfi_2058 protein networkhttps://string-db.org/network/679935.Alfi_2058DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
Alfi_2059 protein networkhttps://string-db.org/network/679935.Alfi_2059Enoyl-(acyl-carrier-protein) reductase (NADH); PFAM: short chain dehydrogenase.
Alfi_2060 protein networkhttps://string-db.org/network/679935.Alfi_2060PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB).
Alfi_2061 protein networkhttps://string-db.org/network/679935.Alfi_2061Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
Alfi_2062 protein networkhttps://string-db.org/network/679935.Alfi_2062Hypothetical protein.
Alfi_2063 protein networkhttps://string-db.org/network/679935.Alfi_2063PFAM: Predicted periplasmic protein (DUF2233).
Alfi_2064 protein networkhttps://string-db.org/network/679935.Alfi_2064Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
Alfi_2066 protein networkhttps://string-db.org/network/679935.Alfi_2066RagB/SusD family protein; PFAM: SusD family.
Alfi_2067 protein networkhttps://string-db.org/network/679935.Alfi_2067Hypothetical protein.
Alfi_2068 protein networkhttps://string-db.org/network/679935.Alfi_2068Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
Alfi_2069 protein networkhttps://string-db.org/network/679935.Alfi_2069Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
Alfi_2070 protein networkhttps://string-db.org/network/679935.Alfi_2070Hypothetical protein.
Alfi_2071 protein networkhttps://string-db.org/network/679935.Alfi_2071Hypothetical protein.
Alfi_2072 protein networkhttps://string-db.org/network/679935.Alfi_2072Hypothetical protein.
Alfi_2073 protein networkhttps://string-db.org/network/679935.Alfi_2073PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Alfi_2074 protein networkhttps://string-db.org/network/679935.Alfi_2074PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase).
Alfi_2075 protein networkhttps://string-db.org/network/679935.Alfi_2075Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_2076 protein networkhttps://string-db.org/network/679935.Alfi_2076Glucose inhibited division protein A.
Alfi_2077 protein networkhttps://string-db.org/network/679935.Alfi_2077Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
Alfi_2078 protein networkhttps://string-db.org/network/679935.Alfi_2078Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
Alfi_2079 protein networkhttps://string-db.org/network/679935.Alfi_2079PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC.
Alfi_2080 protein networkhttps://string-db.org/network/679935.Alfi_2080PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, proka [...]
Alfi_2081 protein networkhttps://string-db.org/network/679935.Alfi_2081Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Sigma-54 interaction domain.
Alfi_2082 protein networkhttps://string-db.org/network/679935.Alfi_2082Hypothetical protein.
Alfi_2083 protein networkhttps://string-db.org/network/679935.Alfi_2083Peroxiredoxin; PFAM: AhpC/TSA family.
Alfi_2084 protein networkhttps://string-db.org/network/679935.Alfi_2084Hypothetical protein.
thyA protein networkhttps://string-db.org/network/679935.Alfi_2085Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
Alfi_2086 protein networkhttps://string-db.org/network/679935.Alfi_2086Hypothetical protein.
Alfi_2087 protein networkhttps://string-db.org/network/679935.Alfi_2087Hypothetical protein.
Alfi_2088 protein networkhttps://string-db.org/network/679935.Alfi_2088RagB/SusD family protein; PFAM: SusD family.
Alfi_2089 protein networkhttps://string-db.org/network/679935.Alfi_2089TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_2090 protein networkhttps://string-db.org/network/679935.Alfi_2090Ig-like domain-containing surface protein; PFAM: Bacterial Ig-like domain (group 2); Fibrobacter succinogenes major domain (Fib_succ_major).
Alfi_2091 protein networkhttps://string-db.org/network/679935.Alfi_2091PFAM: Bacterial regulatory proteins, lacI family; family.
Alfi_2092 protein networkhttps://string-db.org/network/679935.Alfi_2092PFAM: Glycoside hydrolase 97.
Alfi_2097 protein networkhttps://string-db.org/network/679935.Alfi_2097PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Alfi_2098 protein networkhttps://string-db.org/network/679935.Alfi_2098Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
Alfi_2099 protein networkhttps://string-db.org/network/679935.Alfi_2099Hypothetical protein.
Alfi_2100 protein networkhttps://string-db.org/network/679935.Alfi_2100Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
Alfi_2101 protein networkhttps://string-db.org/network/679935.Alfi_2101PFAM: Pyridine nucleotide-disulphide oxidoreductase.
Alfi_2102 protein networkhttps://string-db.org/network/679935.Alfi_2102Hypothetical protein.
Alfi_2103 protein networkhttps://string-db.org/network/679935.Alfi_2103Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
Alfi_2104 protein networkhttps://string-db.org/network/679935.Alfi_2104Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B.
Alfi_2107 protein networkhttps://string-db.org/network/679935.Alfi_2107PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_2110 protein networkhttps://string-db.org/network/679935.Alfi_2110Transposase; PFAM: Integrase core domain.
Alfi_2111 protein networkhttps://string-db.org/network/679935.Alfi_2111Hypothetical protein.
Alfi_2112 protein networkhttps://string-db.org/network/679935.Alfi_2112Hypothetical protein.
Alfi_2113 protein networkhttps://string-db.org/network/679935.Alfi_2113Hypothetical protein.
Alfi_2114 protein networkhttps://string-db.org/network/679935.Alfi_2114Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family.
Alfi_2115 protein networkhttps://string-db.org/network/679935.Alfi_2115Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2117 protein networkhttps://string-db.org/network/679935.Alfi_2117Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family.
Alfi_2118 protein networkhttps://string-db.org/network/679935.Alfi_2118Hypothetical protein.
Alfi_2119 protein networkhttps://string-db.org/network/679935.Alfi_2119Hypothetical protein.
Alfi_2120 protein networkhttps://string-db.org/network/679935.Alfi_2120Hypothetical protein.
Alfi_2121 protein networkhttps://string-db.org/network/679935.Alfi_2121ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
Alfi_2122 protein networkhttps://string-db.org/network/679935.Alfi_2122Transposase; Manually curated.
Alfi_2123 protein networkhttps://string-db.org/network/679935.Alfi_2123Transposase; PFAM: Integrase core domain; manually curated.
Alfi_2124 protein networkhttps://string-db.org/network/679935.Alfi_2124Hypothetical protein.
Alfi_2125 protein networkhttps://string-db.org/network/679935.Alfi_2125PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family; manually curated.
Alfi_2127 protein networkhttps://string-db.org/network/679935.Alfi_2127PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_2128 protein networkhttps://string-db.org/network/679935.Alfi_2128Hypothetical protein.
Alfi_2129 protein networkhttps://string-db.org/network/679935.Alfi_2129Hypothetical protein.
Alfi_2130 protein networkhttps://string-db.org/network/679935.Alfi_2130Hypothetical protein.
Alfi_2131 protein networkhttps://string-db.org/network/679935.Alfi_2131Hypothetical protein.
Alfi_2132 protein networkhttps://string-db.org/network/679935.Alfi_2132Hypothetical protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
Alfi_2133 protein networkhttps://string-db.org/network/679935.Alfi_2133nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family.
Alfi_2134 protein networkhttps://string-db.org/network/679935.Alfi_2134SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Peptidase S24-like; Belongs to the peptidase S24 family.
Alfi_2135 protein networkhttps://string-db.org/network/679935.Alfi_2135Tetratricopeptide repeat protein; Manually curated.
Alfi_2136 protein networkhttps://string-db.org/network/679935.Alfi_2136PFAM: Protein of unknown function (DUF3244).
Alfi_2137 protein networkhttps://string-db.org/network/679935.Alfi_2137Hypothetical protein.
Alfi_2138 protein networkhttps://string-db.org/network/679935.Alfi_2138Hypothetical protein.
Alfi_2139 protein networkhttps://string-db.org/network/679935.Alfi_2139Hypothetical protein.
Alfi_2140 protein networkhttps://string-db.org/network/679935.Alfi_2140Hypothetical protein.
Alfi_2141 protein networkhttps://string-db.org/network/679935.Alfi_2141Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
Alfi_2142 protein networkhttps://string-db.org/network/679935.Alfi_2142Hypothetical protein.
Alfi_2143 protein networkhttps://string-db.org/network/679935.Alfi_2143Hypothetical protein.
Alfi_2144 protein networkhttps://string-db.org/network/679935.Alfi_2144Hypothetical protein.
Alfi_2145 protein networkhttps://string-db.org/network/679935.Alfi_2145PFAM: Conjugative transposon protein TraO.
Alfi_2146 protein networkhttps://string-db.org/network/679935.Alfi_2146TIGRFAM: Bacteroides conjugative transposon TraN protein.
Alfi_2147 protein networkhttps://string-db.org/network/679935.Alfi_2147PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein.
Alfi_2149 protein networkhttps://string-db.org/network/679935.Alfi_2149Hypothetical protein.
Alfi_2150 protein networkhttps://string-db.org/network/679935.Alfi_2150PFAM: VirB8 protein; TIGRFAM: Bacteroides conjugative transposon TraK protein.
Alfi_2151 protein networkhttps://string-db.org/network/679935.Alfi_2151PFAM: Homologues of TraJ from Bacteroides conjugative transposon; TIGRFAM: Bacteroides conjugative transposon TraJ protein.
Alfi_2152 protein networkhttps://string-db.org/network/679935.Alfi_2152Type IV secretion system protein.
Alfi_2153 protein networkhttps://string-db.org/network/679935.Alfi_2153Hypothetical protein.
Alfi_2154 protein networkhttps://string-db.org/network/679935.Alfi_2154Hypothetical protein.
Alfi_2157 protein networkhttps://string-db.org/network/679935.Alfi_2157PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_2159 protein networkhttps://string-db.org/network/679935.Alfi_2159Hypothetical protein; Manually curated.
Alfi_2160 protein networkhttps://string-db.org/network/679935.Alfi_2160Hypothetical protein.
Alfi_2161 protein networkhttps://string-db.org/network/679935.Alfi_2161Hypothetical protein.
Alfi_2162 protein networkhttps://string-db.org/network/679935.Alfi_2162PFAM: Protein of unknown function (DUF3408); manually curated.
Alfi_2163 protein networkhttps://string-db.org/network/679935.Alfi_2163ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
Alfi_2165 protein networkhttps://string-db.org/network/679935.Alfi_2165PFAM: Relaxase/Mobilisation nuclease domain.
Alfi_2166 protein networkhttps://string-db.org/network/679935.Alfi_2166Hypothetical protein.
Alfi_2167 protein networkhttps://string-db.org/network/679935.Alfi_2167Hypothetical protein.
Alfi_2168 protein networkhttps://string-db.org/network/679935.Alfi_2168Subtilisin-like serine protease; PFAM: Subtilase family.
Alfi_2169 protein networkhttps://string-db.org/network/679935.Alfi_2169Hypothetical protein.
Alfi_2170 protein networkhttps://string-db.org/network/679935.Alfi_2170Hypothetical protein.
Alfi_2171 protein networkhttps://string-db.org/network/679935.Alfi_2171PFAM: IgA Peptidase M64.
Alfi_2172 protein networkhttps://string-db.org/network/679935.Alfi_2172Hypothetical protein.
Alfi_2173 protein networkhttps://string-db.org/network/679935.Alfi_2173PFAM: Protein of unknown function (DUF1016).
Alfi_2174 protein networkhttps://string-db.org/network/679935.Alfi_2174Hypothetical protein.
Alfi_2175 protein networkhttps://string-db.org/network/679935.Alfi_2175Hypothetical protein.
Alfi_2178 protein networkhttps://string-db.org/network/679935.Alfi_2178Putative transcriptional regulator.
Alfi_2179 protein networkhttps://string-db.org/network/679935.Alfi_2179Hypothetical protein.
Alfi_2180 protein networkhttps://string-db.org/network/679935.Alfi_2180Hypothetical protein.
Alfi_2181 protein networkhttps://string-db.org/network/679935.Alfi_2181Hypothetical protein.
Alfi_2184 protein networkhttps://string-db.org/network/679935.Alfi_2184Hypothetical protein.
Alfi_2185 protein networkhttps://string-db.org/network/679935.Alfi_2185PFAM: Domain of unknown function (DUF1896); manually curated.
Alfi_2186 protein networkhttps://string-db.org/network/679935.Alfi_2186Uncharacterized protein involved in outer membrane biogenesis; PFAM: Porphyromonas gingivalis major fimbrial subunit protein (FimA).
Alfi_2187 protein networkhttps://string-db.org/network/679935.Alfi_2187Hypothetical protein.
Alfi_2188 protein networkhttps://string-db.org/network/679935.Alfi_2188PFAM: Protein of unknown function (DUF3575).
Alfi_2189 protein networkhttps://string-db.org/network/679935.Alfi_2189Hypothetical protein.
Alfi_2190 protein networkhttps://string-db.org/network/679935.Alfi_2190Hypothetical protein.
Alfi_2191 protein networkhttps://string-db.org/network/679935.Alfi_2191Hypothetical protein.
Alfi_2192 protein networkhttps://string-db.org/network/679935.Alfi_2192Hypothetical protein.
Alfi_2193 protein networkhttps://string-db.org/network/679935.Alfi_2193Hypothetical protein.
Alfi_2194 protein networkhttps://string-db.org/network/679935.Alfi_2194Hypothetical protein.
Alfi_2195 protein networkhttps://string-db.org/network/679935.Alfi_2195Hypothetical protein.
Alfi_2196 protein networkhttps://string-db.org/network/679935.Alfi_2196Hypothetical protein.
Alfi_2197 protein networkhttps://string-db.org/network/679935.Alfi_2197Hypothetical protein.
Alfi_2198 protein networkhttps://string-db.org/network/679935.Alfi_2198Hypothetical protein.
Alfi_2199 protein networkhttps://string-db.org/network/679935.Alfi_2199Hypothetical protein.
Alfi_2201 protein networkhttps://string-db.org/network/679935.Alfi_2201Hypothetical protein.
Alfi_2202 protein networkhttps://string-db.org/network/679935.Alfi_2202Hypothetical protein.
Alfi_2203 protein networkhttps://string-db.org/network/679935.Alfi_2203Hypothetical protein.
Alfi_2204 protein networkhttps://string-db.org/network/679935.Alfi_2204Hypothetical protein.
Alfi_2205 protein networkhttps://string-db.org/network/679935.Alfi_2205Hypothetical protein.
Alfi_2206 protein networkhttps://string-db.org/network/679935.Alfi_2206Hypothetical protein.
Alfi_2207 protein networkhttps://string-db.org/network/679935.Alfi_2207Hypothetical protein.
Alfi_2208 protein networkhttps://string-db.org/network/679935.Alfi_2208Hypothetical protein.
Alfi_2209 protein networkhttps://string-db.org/network/679935.Alfi_2209DNA/RNA helicase, superfamily II, SNF2 family; PFAM: N-6 DNA Methylase; Helicase conserved C-terminal domain.
Alfi_2210 protein networkhttps://string-db.org/network/679935.Alfi_2210Hypothetical protein.
Alfi_2211 protein networkhttps://string-db.org/network/679935.Alfi_2211Hypothetical protein.
Alfi_2212 protein networkhttps://string-db.org/network/679935.Alfi_2212Hypothetical protein.
Alfi_2214 protein networkhttps://string-db.org/network/679935.Alfi_2214PFAM: Domain of unknown function (DUF3560).
Alfi_2216 protein networkhttps://string-db.org/network/679935.Alfi_2216Hypothetical protein.
Alfi_2217 protein networkhttps://string-db.org/network/679935.Alfi_2217Hypothetical protein.
Alfi_2218 protein networkhttps://string-db.org/network/679935.Alfi_2218Hypothetical protein.
Alfi_2219 protein networkhttps://string-db.org/network/679935.Alfi_2219PFAM: Protein of unknown function (DUF2867).
Alfi_2220 protein networkhttps://string-db.org/network/679935.Alfi_2220Hypothetical protein.
Alfi_2221 protein networkhttps://string-db.org/network/679935.Alfi_2221Thiol:disulfide interchange protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
Alfi_2222 protein networkhttps://string-db.org/network/679935.Alfi_2222Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
Alfi_2223 protein networkhttps://string-db.org/network/679935.Alfi_2223Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
pfkA protein networkhttps://string-db.org/network/679935.Alfi_22246-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
Alfi_2225 protein networkhttps://string-db.org/network/679935.Alfi_2225Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
Alfi_2226 protein networkhttps://string-db.org/network/679935.Alfi_2226PFAM: Protein of unknown function (DUF2807).
Alfi_2227 protein networkhttps://string-db.org/network/679935.Alfi_2227PFAM: Transcriptional regulator PadR-like family; manually curated.
Alfi_2228 protein networkhttps://string-db.org/network/679935.Alfi_2228Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
Alfi_2229 protein networkhttps://string-db.org/network/679935.Alfi_2229Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
Alfi_2230 protein networkhttps://string-db.org/network/679935.Alfi_2230PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_2231 protein networkhttps://string-db.org/network/679935.Alfi_2231Hypothetical protein.
Alfi_2232 protein networkhttps://string-db.org/network/679935.Alfi_2232Hypothetical protein.
Alfi_2233 protein networkhttps://string-db.org/network/679935.Alfi_2233Hypothetical protein.
Alfi_2234 protein networkhttps://string-db.org/network/679935.Alfi_2234Hypothetical protein.
Alfi_2235 protein networkhttps://string-db.org/network/679935.Alfi_2235Hypothetical protein.
Alfi_2236 protein networkhttps://string-db.org/network/679935.Alfi_2236Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
Alfi_2237 protein networkhttps://string-db.org/network/679935.Alfi_2237PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup.
Alfi_2238 protein networkhttps://string-db.org/network/679935.Alfi_2238TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.
Alfi_2239 protein networkhttps://string-db.org/network/679935.Alfi_22395,10-methenyltetrahydrofolate synthetase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.
Alfi_2240 protein networkhttps://string-db.org/network/679935.Alfi_2240Hypothetical protein; PFAM: Uncharacterised ArCR, COG2043.
Alfi_2241 protein networkhttps://string-db.org/network/679935.Alfi_2241Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
Alfi_2242 protein networkhttps://string-db.org/network/679935.Alfi_2242Hypothetical protein.
Alfi_2243 protein networkhttps://string-db.org/network/679935.Alfi_2243Hypothetical protein.
uvrC protein networkhttps://string-db.org/network/679935.Alfi_2244Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsib [...]
Alfi_2247 protein networkhttps://string-db.org/network/679935.Alfi_2247Hypothetical protein.
Alfi_2248 protein networkhttps://string-db.org/network/679935.Alfi_2248Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_2249 protein networkhttps://string-db.org/network/679935.Alfi_2249PP-loop superfamily ATP-utilizing enzyme; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain.
Alfi_2250 protein networkhttps://string-db.org/network/679935.Alfi_2250PFAM: Predicted metal-binding protein (DUF2284).
Alfi_2251 protein networkhttps://string-db.org/network/679935.Alfi_2251PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
Alfi_2252 protein networkhttps://string-db.org/network/679935.Alfi_2252Hypothetical protein.
Alfi_2253 protein networkhttps://string-db.org/network/679935.Alfi_2253PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.
Alfi_2254 protein networkhttps://string-db.org/network/679935.Alfi_2254ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
Alfi_2255 protein networkhttps://string-db.org/network/679935.Alfi_2255Hypothetical protein.
Alfi_2256 protein networkhttps://string-db.org/network/679935.Alfi_2256Hypothetical protein.
Alfi_2257 protein networkhttps://string-db.org/network/679935.Alfi_2257Hypothetical protein.
Alfi_2258 protein networkhttps://string-db.org/network/679935.Alfi_2258Hypothetical protein.
Alfi_2259 protein networkhttps://string-db.org/network/679935.Alfi_2259Hypothetical protein.
Alfi_2261 protein networkhttps://string-db.org/network/679935.Alfi_2261Hypothetical protein.
Alfi_2262 protein networkhttps://string-db.org/network/679935.Alfi_2262Type IV secretory pathway, VirD2 component (relaxase); PFAM: Relaxase/Mobilisation nuclease domain.
Alfi_2263 protein networkhttps://string-db.org/network/679935.Alfi_2263PFAM: Bacterial mobilisation protein (MobC).
Alfi_2264 protein networkhttps://string-db.org/network/679935.Alfi_2264DNA primase; PFAM: CHC2 zinc finger.
Alfi_2265 protein networkhttps://string-db.org/network/679935.Alfi_2265Putative P-loop ATPase; PFAM: Virulence-associated protein E.
Alfi_2266 protein networkhttps://string-db.org/network/679935.Alfi_2266Hypothetical protein.
Alfi_2267 protein networkhttps://string-db.org/network/679935.Alfi_2267Hypothetical protein.
Alfi_2268 protein networkhttps://string-db.org/network/679935.Alfi_2268PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain.
Alfi_2269 protein networkhttps://string-db.org/network/679935.Alfi_2269HipA domain-containing protein; TIGRFAM: HipA N-terminal domain.
Alfi_2270 protein networkhttps://string-db.org/network/679935.Alfi_2270PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_2271 protein networkhttps://string-db.org/network/679935.Alfi_2271Putative transcriptional regulator with C-terminal CBS domains; PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family.
Alfi_2272 protein networkhttps://string-db.org/network/679935.Alfi_2272PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2273 protein networkhttps://string-db.org/network/679935.Alfi_2273DNA-binding domain-containing protein, AraC-type.
Alfi_2274 protein networkhttps://string-db.org/network/679935.Alfi_2274TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.
Alfi_2275 protein networkhttps://string-db.org/network/679935.Alfi_2275PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.
Alfi_2276 protein networkhttps://string-db.org/network/679935.Alfi_2276Hypothetical protein.
Alfi_2277 protein networkhttps://string-db.org/network/679935.Alfi_2277Putative membrane protein; PFAM: GtrA-like protein.
Alfi_2278 protein networkhttps://string-db.org/network/679935.Alfi_2278Hypothetical protein.
Alfi_2279 protein networkhttps://string-db.org/network/679935.Alfi_2279Hypothetical protein.
Alfi_2280 protein networkhttps://string-db.org/network/679935.Alfi_2280PFAM: Glycosyl transferase family 2.
Alfi_2281 protein networkhttps://string-db.org/network/679935.Alfi_2281PFAM: DNA alkylation repair enzyme.
Alfi_2282 protein networkhttps://string-db.org/network/679935.Alfi_2282Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_2283 protein networkhttps://string-db.org/network/679935.Alfi_2283Hypothetical protein.
Alfi_2284 protein networkhttps://string-db.org/network/679935.Alfi_2284Hypothetical protein.
Alfi_2285 protein networkhttps://string-db.org/network/679935.Alfi_2285PFAM: Acetyltransferase (GNAT) family.
Alfi_2286 protein networkhttps://string-db.org/network/679935.Alfi_2286Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
Alfi_2289 protein networkhttps://string-db.org/network/679935.Alfi_2289Hypothetical protein.
Alfi_2290 protein networkhttps://string-db.org/network/679935.Alfi_2290Hypothetical protein.
Alfi_2291 protein networkhttps://string-db.org/network/679935.Alfi_2291Hypothetical protein.
Alfi_2292 protein networkhttps://string-db.org/network/679935.Alfi_2292Hypothetical protein.
Alfi_2293 protein networkhttps://string-db.org/network/679935.Alfi_2293PFAM: Uncharacterized protein conserved in bacteria (DUF2141).
Alfi_2294 protein networkhttps://string-db.org/network/679935.Alfi_2294Hypothetical protein.
Alfi_2295 protein networkhttps://string-db.org/network/679935.Alfi_2295PFAM: Domain of unknown function (DUF303).
Alfi_2296 protein networkhttps://string-db.org/network/679935.Alfi_2296PFAM: Acetyltransferase (GNAT) family.
Alfi_2297 protein networkhttps://string-db.org/network/679935.Alfi_2297A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
Alfi_2298 protein networkhttps://string-db.org/network/679935.Alfi_2298PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein.
zupT protein networkhttps://string-db.org/network/679935.Alfi_2299Putative divalent heavy-metal cations transporter; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
Alfi_2300 protein networkhttps://string-db.org/network/679935.Alfi_2300Putative sugar phosphatase of HAD superfamily; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA.
Alfi_2301 protein networkhttps://string-db.org/network/679935.Alfi_2301PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_2302 protein networkhttps://string-db.org/network/679935.Alfi_2302Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_2303 protein networkhttps://string-db.org/network/679935.Alfi_2303Glycerol dehydrogenase-like oxidoreductase; PFAM: 3-dehydroquinate synthase.
Alfi_2304 protein networkhttps://string-db.org/network/679935.Alfi_2304Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
Alfi_2305 protein networkhttps://string-db.org/network/679935.Alfi_2305Transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
Alfi_2306 protein networkhttps://string-db.org/network/679935.Alfi_2306Hypothetical protein.
pyrC protein networkhttps://string-db.org/network/679935.Alfi_2307Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family [...]
carA protein networkhttps://string-db.org/network/679935.Alfi_2308PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
carB protein networkhttps://string-db.org/network/679935.Alfi_2309Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; C [...]
pyrK protein networkhttps://string-db.org/network/679935.Alfi_23102-polyprenylphenol hydroxylase-like oxidoreductase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultim [...]
pyrD-2 protein networkhttps://string-db.org/network/679935.Alfi_2311Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
pyrF protein networkhttps://string-db.org/network/679935.Alfi_2312Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamil [...]
Alfi_2313 protein networkhttps://string-db.org/network/679935.Alfi_2313PFAM: Glutaredoxin.
pyrE protein networkhttps://string-db.org/network/679935.Alfi_2314Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
pyrB protein networkhttps://string-db.org/network/679935.Alfi_2315PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, meta [...]
Alfi_2316 protein networkhttps://string-db.org/network/679935.Alfi_2316Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
Alfi_2317 protein networkhttps://string-db.org/network/679935.Alfi_2317Putative glycosylase; PFAM: Domain of unknown function (DUF377).
Alfi_2318 protein networkhttps://string-db.org/network/679935.Alfi_2318Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_2319 protein networkhttps://string-db.org/network/679935.Alfi_2319PFAM: F5/8 type C domain.
Alfi_2320 protein networkhttps://string-db.org/network/679935.Alfi_2320Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_2321 protein networkhttps://string-db.org/network/679935.Alfi_2321Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
purE protein networkhttps://string-db.org/network/679935.Alfi_23225-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
purK protein networkhttps://string-db.org/network/679935.Alfi_23235-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAI [...]
Alfi_2324 protein networkhttps://string-db.org/network/679935.Alfi_2324PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II; phosphoribosylformylglycinam [...]
Alfi_2325 protein networkhttps://string-db.org/network/679935.Alfi_2325Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
purC protein networkhttps://string-db.org/network/679935.Alfi_2326PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.
purF protein networkhttps://string-db.org/network/679935.Alfi_2327Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
purM protein networkhttps://string-db.org/network/679935.Alfi_2328Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synth [...]
purN protein networkhttps://string-db.org/network/679935.Alfi_2329Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), pro [...]
Alfi_2330 protein networkhttps://string-db.org/network/679935.Alfi_2330Putative stress protein (general stress protein 26); PFAM: Pyridoxamine 5'-phosphate oxidase.
purH protein networkhttps://string-db.org/network/679935.Alfi_2331PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
purD protein networkhttps://string-db.org/network/679935.Alfi_2332Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C doma [...]
folD protein networkhttps://string-db.org/network/679935.Alfi_23335,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hyd [...]
Alfi_2335 protein networkhttps://string-db.org/network/679935.Alfi_2335Hypothetical protein; PFAM: Acetyltransferase (GNAT) family; Uncharacterized conserved protein (DUF2156).
Alfi_2336 protein networkhttps://string-db.org/network/679935.Alfi_2336Phosphoglycerol transferase family protein, alkaline phosphatase superfamily; PFAM: Sulfatase.
Alfi_2337 protein networkhttps://string-db.org/network/679935.Alfi_2337Nicotinate-nucleotide pyrophosphorylase (carboxylating); PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicot [...]
Alfi_2338 protein networkhttps://string-db.org/network/679935.Alfi_2338Hypothetical protein.
Alfi_2339 protein networkhttps://string-db.org/network/679935.Alfi_2339Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_2340 protein networkhttps://string-db.org/network/679935.Alfi_2340Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
rlmH protein networkhttps://string-db.org/network/679935.Alfi_2341Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
Alfi_2342 protein networkhttps://string-db.org/network/679935.Alfi_2342Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
asnS protein networkhttps://string-db.org/network/679935.Alfi_2343PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase.
Alfi_2344 protein networkhttps://string-db.org/network/679935.Alfi_2344RNA polymerase, sigma 54 subunit, RpoN/SigL; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase [...]
Alfi_2345 protein networkhttps://string-db.org/network/679935.Alfi_2345Hypothetical protein.
Alfi_2346 protein networkhttps://string-db.org/network/679935.Alfi_2346PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
Alfi_2347 protein networkhttps://string-db.org/network/679935.Alfi_2347Hypothetical protein.
nadE protein networkhttps://string-db.org/network/679935.Alfi_2348NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
pepT protein networkhttps://string-db.org/network/679935.Alfi_2349Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
Alfi_2350 protein networkhttps://string-db.org/network/679935.Alfi_2350Hypothetical protein.
Alfi_2351 protein networkhttps://string-db.org/network/679935.Alfi_2351PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family.
Alfi_2352 protein networkhttps://string-db.org/network/679935.Alfi_2352Hypothetical protein.
Alfi_2353 protein networkhttps://string-db.org/network/679935.Alfi_2353Putative pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase domain.
Alfi_2354 protein networkhttps://string-db.org/network/679935.Alfi_23544-alpha-glucanotransferase; PFAM: Starch binding domain; 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
Alfi_2355 protein networkhttps://string-db.org/network/679935.Alfi_2355Lysophospholipase.
murF protein networkhttps://string-db.org/network/679935.Alfi_2356UDP-N-acetylmuramyl pentapeptide synthase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the [...]
Alfi_2357 protein networkhttps://string-db.org/network/679935.Alfi_2357PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; manually curated.
Alfi_2358 protein networkhttps://string-db.org/network/679935.Alfi_2358Phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I f [...]
Alfi_2359 protein networkhttps://string-db.org/network/679935.Alfi_2359Hypothetical protein.
Alfi_2360 protein networkhttps://string-db.org/network/679935.Alfi_2360Putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; PFAM: Transglycosylase SLT domain.
Alfi_2361 protein networkhttps://string-db.org/network/679935.Alfi_2361Hypothetical protein.
Alfi_2362 protein networkhttps://string-db.org/network/679935.Alfi_2362Hypothetical protein.
Alfi_2363 protein networkhttps://string-db.org/network/679935.Alfi_2363Hypothetical protein.
Alfi_2364 protein networkhttps://string-db.org/network/679935.Alfi_2364Hypothetical protein.
Alfi_2365 protein networkhttps://string-db.org/network/679935.Alfi_2365Hypothetical protein.
Alfi_2366 protein networkhttps://string-db.org/network/679935.Alfi_2366Hypothetical protein.
Alfi_2367 protein networkhttps://string-db.org/network/679935.Alfi_2367Hypothetical protein.
Alfi_2368 protein networkhttps://string-db.org/network/679935.Alfi_2368Hypothetical protein.
Alfi_2369 protein networkhttps://string-db.org/network/679935.Alfi_2369Hypothetical protein.
Alfi_2370 protein networkhttps://string-db.org/network/679935.Alfi_2370Hypothetical protein.
Alfi_2371 protein networkhttps://string-db.org/network/679935.Alfi_2371Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
Alfi_2372 protein networkhttps://string-db.org/network/679935.Alfi_2372ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
Alfi_2374 protein networkhttps://string-db.org/network/679935.Alfi_2374Mismatch repair ATPase (MutS family); PFAM: MutS domain V.
Alfi_2375 protein networkhttps://string-db.org/network/679935.Alfi_2375PFAM: Polyketide cyclase / dehydrase and lipid transport.
Alfi_2376 protein networkhttps://string-db.org/network/679935.Alfi_2376ATPase, YjeE family; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family.
Alfi_2377 protein networkhttps://string-db.org/network/679935.Alfi_2377Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: PglZ domain; Response regulator receiver domain.
Alfi_2378 protein networkhttps://string-db.org/network/679935.Alfi_2378PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
Alfi_2379 protein networkhttps://string-db.org/network/679935.Alfi_2379Hypothetical protein.
Alfi_2380 protein networkhttps://string-db.org/network/679935.Alfi_2380Ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
mfd protein networkhttps://string-db.org/network/679935.Alfi_2381Transcription-repair coupling factor Mfd; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncate [...]
coaX protein networkhttps://string-db.org/network/679935.Alfi_2382Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
Alfi_2383 protein networkhttps://string-db.org/network/679935.Alfi_2383Hypothetical protein.
Alfi_2384 protein networkhttps://string-db.org/network/679935.Alfi_2384Putative enzyme of heme biosynthesis.
Alfi_2385 protein networkhttps://string-db.org/network/679935.Alfi_2385Cell division protein; PFAM: Protein of unknown function (DUF1239).
Alfi_2386 protein networkhttps://string-db.org/network/679935.Alfi_2386CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.
Alfi_2387 protein networkhttps://string-db.org/network/679935.Alfi_2387PFAM: PPIC-type PPIASE domain.
Alfi_2388 protein networkhttps://string-db.org/network/679935.Alfi_2388PFAM: Iron-containing alcohol dehydrogenase.
Alfi_2389 protein networkhttps://string-db.org/network/679935.Alfi_2389PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain.
Alfi_2390 protein networkhttps://string-db.org/network/679935.Alfi_2390PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain.
Alfi_2391 protein networkhttps://string-db.org/network/679935.Alfi_2391PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal.
Alfi_2392 protein networkhttps://string-db.org/network/679935.Alfi_2392Hypothetical protein.
Alfi_2393 protein networkhttps://string-db.org/network/679935.Alfi_2393Putative N-acetylglucosamine kinase; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
Alfi_2394 protein networkhttps://string-db.org/network/679935.Alfi_2394Putative sugar phosphate isomerase; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase.
Alfi_2395 protein networkhttps://string-db.org/network/679935.Alfi_23953-octaprenyl-4hydroxybenzoate decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases; Belon [...]
Alfi_2396 protein networkhttps://string-db.org/network/679935.Alfi_2396TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.
rpsU protein networkhttps://string-db.org/network/679935.Alfi_2399PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
Alfi_2400 protein networkhttps://string-db.org/network/679935.Alfi_2400PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; family.
Alfi_2403 protein networkhttps://string-db.org/network/679935.Alfi_2403PFAM: Carbohydrate binding domain.
Alfi_2404 protein networkhttps://string-db.org/network/679935.Alfi_2404RagB/SusD family protein; PFAM: SusD family.
Alfi_2406 protein networkhttps://string-db.org/network/679935.Alfi_2406PFAM: Protein of unknown function (DUF2961).
Alfi_2407 protein networkhttps://string-db.org/network/679935.Alfi_2407Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
Alfi_2408 protein networkhttps://string-db.org/network/679935.Alfi_2408PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Alfi_2409 protein networkhttps://string-db.org/network/679935.Alfi_2409Transposase; PFAM: Integrase core domain.
Alfi_2410 protein networkhttps://string-db.org/network/679935.Alfi_2410Hypothetical protein.
Alfi_2411 protein networkhttps://string-db.org/network/679935.Alfi_2411PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_2413 protein networkhttps://string-db.org/network/679935.Alfi_2413Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
Alfi_2414 protein networkhttps://string-db.org/network/679935.Alfi_2414PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_2415 protein networkhttps://string-db.org/network/679935.Alfi_2415Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_2416 protein networkhttps://string-db.org/network/679935.Alfi_2416TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_2417 protein networkhttps://string-db.org/network/679935.Alfi_2417RagB/SusD family protein; PFAM: SusD family.
Alfi_2418 protein networkhttps://string-db.org/network/679935.Alfi_2418Hypothetical protein (Fib_succ_major); PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain.
Alfi_2419 protein networkhttps://string-db.org/network/679935.Alfi_2419PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_2420 protein networkhttps://string-db.org/network/679935.Alfi_2420PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_2421 protein networkhttps://string-db.org/network/679935.Alfi_2421PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase fam [...]
Alfi_2422 protein networkhttps://string-db.org/network/679935.Alfi_2422Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2423 protein networkhttps://string-db.org/network/679935.Alfi_2423PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Belongs to the transketolase family.
Alfi_2425 protein networkhttps://string-db.org/network/679935.Alfi_2425Hypothetical protein.
Alfi_2426 protein networkhttps://string-db.org/network/679935.Alfi_2426Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2427 protein networkhttps://string-db.org/network/679935.Alfi_2427Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2428 protein networkhttps://string-db.org/network/679935.Alfi_2428Hypothetical protein.
Alfi_2429 protein networkhttps://string-db.org/network/679935.Alfi_2429Hypothetical protein; Manually curated; non-canonical start codon.
Alfi_2430 protein networkhttps://string-db.org/network/679935.Alfi_2430Hypothetical protein; Manually curated.
Alfi_2431 protein networkhttps://string-db.org/network/679935.Alfi_2431Hypothetical protein.
Alfi_2432 protein networkhttps://string-db.org/network/679935.Alfi_2432Hypothetical protein; Manually curated.
Alfi_2434 protein networkhttps://string-db.org/network/679935.Alfi_2434PFAM: Predicted metal-binding protein (DUF2284).
Alfi_2435 protein networkhttps://string-db.org/network/679935.Alfi_2435ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
Alfi_2436 protein networkhttps://string-db.org/network/679935.Alfi_2436ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; manually curated; Belongs to the binding-protein-dependent transport system permease family. FecCD su [...]
Alfi_2437 protein networkhttps://string-db.org/network/679935.Alfi_2437ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
Alfi_2438 protein networkhttps://string-db.org/network/679935.Alfi_2438Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_2439 protein networkhttps://string-db.org/network/679935.Alfi_2439Hypothetical protein.
Alfi_2440 protein networkhttps://string-db.org/network/679935.Alfi_2440Hypothetical protein.
Alfi_2441 protein networkhttps://string-db.org/network/679935.Alfi_2441Hypothetical protein.
Alfi_2442 protein networkhttps://string-db.org/network/679935.Alfi_2442Hypothetical protein.
Alfi_2443 protein networkhttps://string-db.org/network/679935.Alfi_2443Site-specific recombinase XerD; PFAM: Phage integrase family; manually curated.
Alfi_2444 protein networkhttps://string-db.org/network/679935.Alfi_2444Hypothetical protein; Belongs to the 'phage' integrase family.
Alfi_2445 protein networkhttps://string-db.org/network/679935.Alfi_2445Hypothetical protein.
Alfi_2446 protein networkhttps://string-db.org/network/679935.Alfi_2446Hypothetical protein; Belongs to the 'phage' integrase family.
Alfi_2447 protein networkhttps://string-db.org/network/679935.Alfi_2447Putative transcriptional regulator; PFAM: Penicillinase repressor.
Alfi_2448 protein networkhttps://string-db.org/network/679935.Alfi_2448Antirepressor regulating drug resistance protein; PFAM: BlaR1 peptidase M56.
Alfi_2449 protein networkhttps://string-db.org/network/679935.Alfi_2449KWG repeat protein; PFAM: KWG Leptospira.
Alfi_2450 protein networkhttps://string-db.org/network/679935.Alfi_2450Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
Alfi_2451 protein networkhttps://string-db.org/network/679935.Alfi_2451DnaK suppressor protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger.
ileS protein networkhttps://string-db.org/network/679935.Alfi_2452Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
Alfi_2453 protein networkhttps://string-db.org/network/679935.Alfi_2453PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.
Alfi_2454 protein networkhttps://string-db.org/network/679935.Alfi_2454Acetyltransferase (isoleucine patch superfamily); PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats).
Alfi_2455 protein networkhttps://string-db.org/network/679935.Alfi_2455ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
Alfi_2456 protein networkhttps://string-db.org/network/679935.Alfi_2456Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
valS protein networkhttps://string-db.org/network/679935.Alfi_2457valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
lon protein networkhttps://string-db.org/network/679935.Alfi_2458ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...]
kdsB protein networkhttps://string-db.org/network/679935.Alfi_24593-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
Alfi_2460 protein networkhttps://string-db.org/network/679935.Alfi_2460PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; Belongs to the KdsA family.
Alfi_2461 protein networkhttps://string-db.org/network/679935.Alfi_2461KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily.
Alfi_2462 protein networkhttps://string-db.org/network/679935.Alfi_2462Hypothetical protein; PFAM: YCII-related domain.
Alfi_2463 protein networkhttps://string-db.org/network/679935.Alfi_2463PFAM: Glycoside hydrolase 97.
Alfi_2464 protein networkhttps://string-db.org/network/679935.Alfi_2464Hypothetical protein.
Alfi_2465 protein networkhttps://string-db.org/network/679935.Alfi_2465PFAM: CBS domain; Voltage gated chloride channel.
Alfi_2466 protein networkhttps://string-db.org/network/679935.Alfi_2466PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
Alfi_2467 protein networkhttps://string-db.org/network/679935.Alfi_2467Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
rsfS protein networkhttps://string-db.org/network/679935.Alfi_2468Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association [...]
ftsH protein networkhttps://string-db.org/network/679935.Alfi_2469ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
Alfi_2470 protein networkhttps://string-db.org/network/679935.Alfi_2470CDP-diglyceride synthetase; PFAM: Cytidylyltransferase family; Belongs to the CDS family.
psd protein networkhttps://string-db.org/network/679935.Alfi_2471Phosphatidylserine decarboxylase precursor-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
ahcY protein networkhttps://string-db.org/network/679935.Alfi_2473Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
Alfi_2474 protein networkhttps://string-db.org/network/679935.Alfi_2474Transposase; PFAM: Integrase core domain; manually curated.
Alfi_2475 protein networkhttps://string-db.org/network/679935.Alfi_2475Transposase; Manually curated.
Alfi_2476 protein networkhttps://string-db.org/network/679935.Alfi_2476PFAM: Fibronectin type III domain.
Alfi_2478 protein networkhttps://string-db.org/network/679935.Alfi_2478Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
Alfi_2479 protein networkhttps://string-db.org/network/679935.Alfi_2479PFAM: Protein of unknown function (DUF456).
panD protein networkhttps://string-db.org/network/679935.Alfi_2480L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
panC protein networkhttps://string-db.org/network/679935.Alfi_2481Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase f [...]
Alfi_2482 protein networkhttps://string-db.org/network/679935.Alfi_2482Hypothetical protein.
Alfi_2483 protein networkhttps://string-db.org/network/679935.Alfi_2483Topoisomerase IA; PFAM: Peptidase family M49.
Alfi_2485 protein networkhttps://string-db.org/network/679935.Alfi_2485PFAM: Rubredoxin.
Alfi_2486 protein networkhttps://string-db.org/network/679935.Alfi_2486Hypothetical protein.
ispD protein networkhttps://string-db.org/network/679935.Alfi_24872-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
Alfi_2488 protein networkhttps://string-db.org/network/679935.Alfi_2488Hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase.
Alfi_2489 protein networkhttps://string-db.org/network/679935.Alfi_2489Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
lpxK protein networkhttps://string-db.org/network/679935.Alfi_2490lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-pho [...]
Alfi_2491 protein networkhttps://string-db.org/network/679935.Alfi_2491Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucl [...]
Alfi_2492 protein networkhttps://string-db.org/network/679935.Alfi_2492PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
Alfi_2493 protein networkhttps://string-db.org/network/679935.Alfi_2493Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
Alfi_2494 protein networkhttps://string-db.org/network/679935.Alfi_2494PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
secA protein networkhttps://string-db.org/network/679935.Alfi_2495Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
Alfi_2496 protein networkhttps://string-db.org/network/679935.Alfi_2496PFAM: Glycosyl transferase family 2.
Alfi_2497 protein networkhttps://string-db.org/network/679935.Alfi_2497PFAM: Glycosyl transferase family 2.
Alfi_2498 protein networkhttps://string-db.org/network/679935.Alfi_2498PFAM: Protein of unknown function (DUF2851).
Alfi_2499 protein networkhttps://string-db.org/network/679935.Alfi_2499Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
Alfi_2500 protein networkhttps://string-db.org/network/679935.Alfi_2500SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated domain.
Alfi_2501 protein networkhttps://string-db.org/network/679935.Alfi_2501Putative AP superfamily protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
Alfi_2502 protein networkhttps://string-db.org/network/679935.Alfi_2502PFAM: GSCFA family.
ispE protein networkhttps://string-db.org/network/679935.Alfi_25034-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
Alfi_2504 protein networkhttps://string-db.org/network/679935.Alfi_2504PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family.
Alfi_2505 protein networkhttps://string-db.org/network/679935.Alfi_2505PFAM: Protein of unknown function (DUF454).
Alfi_2507 protein networkhttps://string-db.org/network/679935.Alfi_2507Hypothetical protein.
Alfi_2508 protein networkhttps://string-db.org/network/679935.Alfi_2508Transposase; Manually curated.
Alfi_2509 protein networkhttps://string-db.org/network/679935.Alfi_2509Transposase; PFAM: Integrase core domain.
Alfi_2510 protein networkhttps://string-db.org/network/679935.Alfi_2510Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2511 protein networkhttps://string-db.org/network/679935.Alfi_2511Hypothetical protein.
Alfi_2512 protein networkhttps://string-db.org/network/679935.Alfi_2512Hypothetical protein.
Alfi_2513 protein networkhttps://string-db.org/network/679935.Alfi_2513GTP-binding protein TypA/BipA; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-bind [...]
Alfi_2514 protein networkhttps://string-db.org/network/679935.Alfi_25143-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
Alfi_2515 protein networkhttps://string-db.org/network/679935.Alfi_2515PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
Alfi_2516 protein networkhttps://string-db.org/network/679935.Alfi_2516Hypothetical protein.
ruvB protein networkhttps://string-db.org/network/679935.Alfi_2517Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promot [...]
Alfi_2518 protein networkhttps://string-db.org/network/679935.Alfi_2518Hypothetical protein.
Alfi_2519 protein networkhttps://string-db.org/network/679935.Alfi_2519PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
Alfi_2520 protein networkhttps://string-db.org/network/679935.Alfi_2520Hypothetical protein.
Alfi_2522 protein networkhttps://string-db.org/network/679935.Alfi_2522Hypothetical protein.
Alfi_2523 protein networkhttps://string-db.org/network/679935.Alfi_2523PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit.
Alfi_2524 protein networkhttps://string-db.org/network/679935.Alfi_2524PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
lgt protein networkhttps://string-db.org/network/679935.Alfi_2525Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
Alfi_2526 protein networkhttps://string-db.org/network/679935.Alfi_2526Hypothetical protein.
Alfi_2527 protein networkhttps://string-db.org/network/679935.Alfi_2527PFAM: GtrA-like protein.
Alfi_2528 protein networkhttps://string-db.org/network/679935.Alfi_2528TIGRFAM: TIGR04076 family protein.
uvrB protein networkhttps://string-db.org/network/679935.Alfi_2529Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abn [...]
dnaG protein networkhttps://string-db.org/network/679935.Alfi_2530DNA primase, catalytic core; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
Alfi_2531 protein networkhttps://string-db.org/network/679935.Alfi_2531Hypothetical protein.
smpB protein networkhttps://string-db.org/network/679935.Alfi_2532SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
Alfi_2533 protein networkhttps://string-db.org/network/679935.Alfi_2533PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB.
Alfi_2534 protein networkhttps://string-db.org/network/679935.Alfi_2534PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ.
Alfi_2535 protein networkhttps://string-db.org/network/679935.Alfi_2535Hypothetical protein.
Alfi_2536 protein networkhttps://string-db.org/network/679935.Alfi_2536PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
Alfi_2537 protein networkhttps://string-db.org/network/679935.Alfi_2537Hypothetical protein; PFAM: RmuC family.
Alfi_2538 protein networkhttps://string-db.org/network/679935.Alfi_2538Hypothetical protein.
Alfi_2539 protein networkhttps://string-db.org/network/679935.Alfi_2539Hypothetical protein.
Alfi_2540 protein networkhttps://string-db.org/network/679935.Alfi_2540ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
Alfi_2541 protein networkhttps://string-db.org/network/679935.Alfi_2541Hypothetical protein.
Alfi_2542 protein networkhttps://string-db.org/network/679935.Alfi_2542PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; manually curated; Belongs to the ribulose-phosphate 3-epimerase family.
Alfi_2543 protein networkhttps://string-db.org/network/679935.Alfi_2543Putative HD superfamily hydrolase; PFAM: HD domain.
Alfi_2544 protein networkhttps://string-db.org/network/679935.Alfi_2544ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter.
Alfi_2545 protein networkhttps://string-db.org/network/679935.Alfi_2545rRNA methylase, putative, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like [...]
Alfi_2546 protein networkhttps://string-db.org/network/679935.Alfi_2546Hypothetical protein.
Alfi_2547 protein networkhttps://string-db.org/network/679935.Alfi_2547Putative metal-dependent hydrolase; PFAM: Protein of unknown function DUF45.
Alfi_2548 protein networkhttps://string-db.org/network/679935.Alfi_2548PFAM: Major Facilitator Superfamily; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter family protein; manually curated.
Alfi_2549 protein networkhttps://string-db.org/network/679935.Alfi_2549Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
Alfi_2550 protein networkhttps://string-db.org/network/679935.Alfi_2550Transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
Alfi_2551 protein networkhttps://string-db.org/network/679935.Alfi_2551Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
Alfi_2552 protein networkhttps://string-db.org/network/679935.Alfi_2552PFAM: Protein of unknown function (DUF1349).
Alfi_2553 protein networkhttps://string-db.org/network/679935.Alfi_2553PFAM: Glycerophosphoryl diester phosphodiesterase family.
galK protein networkhttps://string-db.org/network/679935.Alfi_2554Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
Alfi_2556 protein networkhttps://string-db.org/network/679935.Alfi_2556Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
Alfi_2557 protein networkhttps://string-db.org/network/679935.Alfi_2557Transcriptional regulator/sugar kinase; PFAM: ROK family.
Alfi_2558 protein networkhttps://string-db.org/network/679935.Alfi_2558PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
Alfi_2559 protein networkhttps://string-db.org/network/679935.Alfi_2559Hypothetical protein.
Alfi_2560 protein networkhttps://string-db.org/network/679935.Alfi_2560Hypothetical protein.
nagB protein networkhttps://string-db.org/network/679935.Alfi_2561Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glu [...]
Alfi_2562 protein networkhttps://string-db.org/network/679935.Alfi_25626-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; TIGRFAM: glucosamine-6-phosph [...]
Alfi_2563 protein networkhttps://string-db.org/network/679935.Alfi_2563Hypothetical protein.
Alfi_2564 protein networkhttps://string-db.org/network/679935.Alfi_2564Putative homoserine kinase type II (protein kinase fold); PFAM: Phosphotransferase enzyme family.
Alfi_2565 protein networkhttps://string-db.org/network/679935.Alfi_2565PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I.
Alfi_2566 protein networkhttps://string-db.org/network/679935.Alfi_2566Transcriptional regulator/sugar kinase; PFAM: ROK family.
Alfi_2567 protein networkhttps://string-db.org/network/679935.Alfi_2567Fucose permease; PFAM: Major Facilitator Superfamily.
Alfi_2568 protein networkhttps://string-db.org/network/679935.Alfi_2568Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2569 protein networkhttps://string-db.org/network/679935.Alfi_2569Hypothetical protein.
Alfi_2570 protein networkhttps://string-db.org/network/679935.Alfi_2570Transposase; PFAM: Integrase core domain.
Alfi_2571 protein networkhttps://string-db.org/network/679935.Alfi_2571Hypothetical protein.
Alfi_2572 protein networkhttps://string-db.org/network/679935.Alfi_2572Hypothetical protein.
Alfi_2573 protein networkhttps://string-db.org/network/679935.Alfi_2573Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
Alfi_2574 protein networkhttps://string-db.org/network/679935.Alfi_2574Hypothetical protein.
Alfi_2575 protein networkhttps://string-db.org/network/679935.Alfi_2575Hypothetical protein.
Alfi_2576 protein networkhttps://string-db.org/network/679935.Alfi_2576Hypothetical protein.
Alfi_2577 protein networkhttps://string-db.org/network/679935.Alfi_2577Hypothetical protein.
Alfi_2579 protein networkhttps://string-db.org/network/679935.Alfi_2579Hypothetical protein.
Alfi_2580 protein networkhttps://string-db.org/network/679935.Alfi_2580PFAM: Protein of unknown function (DUF3244).
Alfi_2581 protein networkhttps://string-db.org/network/679935.Alfi_2581PFAM: Tetratricopeptide repeat.
Alfi_2582 protein networkhttps://string-db.org/network/679935.Alfi_2582Hypothetical protein.
Alfi_2583 protein networkhttps://string-db.org/network/679935.Alfi_2583Hypothetical protein.
Alfi_2584 protein networkhttps://string-db.org/network/679935.Alfi_2584Hypothetical protein.
Alfi_2585 protein networkhttps://string-db.org/network/679935.Alfi_2585Hypothetical protein.
Alfi_2586 protein networkhttps://string-db.org/network/679935.Alfi_2586Hypothetical protein; PFAM: HEPN domain.
Alfi_2587 protein networkhttps://string-db.org/network/679935.Alfi_2587Hypothetical protein.
Alfi_2588 protein networkhttps://string-db.org/network/679935.Alfi_2588PFAM: BRO family, N-terminal domain.
Alfi_2589 protein networkhttps://string-db.org/network/679935.Alfi_2589Hypothetical protein.
Alfi_2590 protein networkhttps://string-db.org/network/679935.Alfi_2590Methyltransferase family protein; PFAM: Methyltransferase domain; manually curated.
Alfi_2591 protein networkhttps://string-db.org/network/679935.Alfi_2591Subtilisin-like serine protease; PFAM: Subtilase family.
Alfi_2592 protein networkhttps://string-db.org/network/679935.Alfi_2592Hypothetical protein.
Alfi_2593 protein networkhttps://string-db.org/network/679935.Alfi_2593Hypothetical protein.
Alfi_2594 protein networkhttps://string-db.org/network/679935.Alfi_2594Hypothetical protein.
Alfi_2596 protein networkhttps://string-db.org/network/679935.Alfi_2596Hypothetical protein.
Alfi_2597 protein networkhttps://string-db.org/network/679935.Alfi_2597Hypothetical protein.
Alfi_2598 protein networkhttps://string-db.org/network/679935.Alfi_2598PFAM: Protein of unknown function (DUF1812).
Alfi_2599 protein networkhttps://string-db.org/network/679935.Alfi_2599Hypothetical protein.
Alfi_2600 protein networkhttps://string-db.org/network/679935.Alfi_2600PFAM: Protein of unknown function (DUF3575).
Alfi_2601 protein networkhttps://string-db.org/network/679935.Alfi_2601Hypothetical protein.
Alfi_2602 protein networkhttps://string-db.org/network/679935.Alfi_2602Hypothetical protein.
Alfi_2605 protein networkhttps://string-db.org/network/679935.Alfi_2605Hypothetical protein.
Alfi_2606 protein networkhttps://string-db.org/network/679935.Alfi_2606PFAM: Protein of unknown function (DUF2971).
Alfi_2607 protein networkhttps://string-db.org/network/679935.Alfi_2607Hypothetical protein.
Alfi_2608 protein networkhttps://string-db.org/network/679935.Alfi_2608nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family.
Alfi_2609 protein networkhttps://string-db.org/network/679935.Alfi_2609SOS response UmuD protein; PFAM: Peptidase S24-like; Belongs to the peptidase S24 family.
Alfi_2610 protein networkhttps://string-db.org/network/679935.Alfi_2610ORF6N domain-containing protein; PFAM: ORF6N domain.
Alfi_2611 protein networkhttps://string-db.org/network/679935.Alfi_2611Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2613 protein networkhttps://string-db.org/network/679935.Alfi_2613Hypothetical protein.
Alfi_2614 protein networkhttps://string-db.org/network/679935.Alfi_2614Hypothetical protein; Manually curated.
Alfi_2615 protein networkhttps://string-db.org/network/679935.Alfi_2615Hypothetical protein.
Alfi_2616 protein networkhttps://string-db.org/network/679935.Alfi_2616Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
Alfi_2617 protein networkhttps://string-db.org/network/679935.Alfi_2617TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
Alfi_2618 protein networkhttps://string-db.org/network/679935.Alfi_2618Hypothetical protein; Manually curated.
Alfi_2619 protein networkhttps://string-db.org/network/679935.Alfi_2619Hypothetical protein.
Alfi_2620 protein networkhttps://string-db.org/network/679935.Alfi_2620Hypothetical protein.
Alfi_2622 protein networkhttps://string-db.org/network/679935.Alfi_2622Hypothetical protein.
Alfi_2623 protein networkhttps://string-db.org/network/679935.Alfi_2623Hypothetical protein.
Alfi_2624 protein networkhttps://string-db.org/network/679935.Alfi_2624Hypothetical protein.
Alfi_2625 protein networkhttps://string-db.org/network/679935.Alfi_2625Hypothetical protein.
Alfi_2626 protein networkhttps://string-db.org/network/679935.Alfi_2626Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_2627 protein networkhttps://string-db.org/network/679935.Alfi_2627Hypothetical protein.
Alfi_2629 protein networkhttps://string-db.org/network/679935.Alfi_2629Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
Alfi_2630 protein networkhttps://string-db.org/network/679935.Alfi_2630Hypothetical protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N).
Alfi_2631 protein networkhttps://string-db.org/network/679935.Alfi_2631Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
Alfi_2632 protein networkhttps://string-db.org/network/679935.Alfi_2632Putative regulator of cell autolysis; PFAM: Histidine kinase.
Alfi_2633 protein networkhttps://string-db.org/network/679935.Alfi_2633Transposase family protein; PFAM: Transposase DDE domain.
Alfi_2634 protein networkhttps://string-db.org/network/679935.Alfi_2634Hypothetical protein.
Alfi_2635 protein networkhttps://string-db.org/network/679935.Alfi_2635AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme.
plsY protein networkhttps://string-db.org/network/679935.Alfi_2636Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). Th [...]
Alfi_2637 protein networkhttps://string-db.org/network/679935.Alfi_2637Hypothetical protein; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179).
miaB protein networkhttps://string-db.org/network/679935.Alfi_2638tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl [...]
Alfi_2639 protein networkhttps://string-db.org/network/679935.Alfi_2639DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
der protein networkhttps://string-db.org/network/679935.Alfi_2640Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA [...]
Alfi_2641 protein networkhttps://string-db.org/network/679935.Alfi_2641Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
Alfi_2642 protein networkhttps://string-db.org/network/679935.Alfi_2642Fucose permease; PFAM: Major Facilitator Superfamily.
Alfi_2643 protein networkhttps://string-db.org/network/679935.Alfi_2643Hypothetical protein.
Alfi_2644 protein networkhttps://string-db.org/network/679935.Alfi_2644Phosphate starvation-inducible protein PhoH, predicted ATPase; PFAM: PhoH-like protein.
Alfi_2645 protein networkhttps://string-db.org/network/679935.Alfi_2645Aminoacyl-histidine dipeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: Xaa-His dipeptidase.
Alfi_2646 protein networkhttps://string-db.org/network/679935.Alfi_2646Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.
Alfi_2647 protein networkhttps://string-db.org/network/679935.Alfi_2647SnoaL-like polyketide cyclase.
Alfi_2648 protein networkhttps://string-db.org/network/679935.Alfi_2648Hypothetical protein.
Alfi_2649 protein networkhttps://string-db.org/network/679935.Alfi_2649PFAM: Protein of unknown function (DUF419).
Alfi_2650 protein networkhttps://string-db.org/network/679935.Alfi_2650PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC.
Alfi_2651 protein networkhttps://string-db.org/network/679935.Alfi_2651Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_2652 protein networkhttps://string-db.org/network/679935.Alfi_2652Hypothetical protein.
Alfi_2653 protein networkhttps://string-db.org/network/679935.Alfi_2653PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
xylA protein networkhttps://string-db.org/network/679935.Alfi_2654PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
Alfi_2655 protein networkhttps://string-db.org/network/679935.Alfi_2655PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
Alfi_2656 protein networkhttps://string-db.org/network/679935.Alfi_2656NUDIX family protein; PFAM: NUDIX domain.
Alfi_2657 protein networkhttps://string-db.org/network/679935.Alfi_2657Galactose mutarotase-like enzyme; Converts alpha-aldose to the beta-anomer.
gltX protein networkhttps://string-db.org/network/679935.Alfi_2658glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
ychF protein networkhttps://string-db.org/network/679935.Alfi_2659GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
Alfi_2660 protein networkhttps://string-db.org/network/679935.Alfi_2660PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; PA14 domain.
Alfi_2661 protein networkhttps://string-db.org/network/679935.Alfi_2661Transcriptional regulator.
Alfi_2662 protein networkhttps://string-db.org/network/679935.Alfi_2662Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; PA14 domain; TIGRFAM: alpha-1,2-mannosidase, putative.
Alfi_2663 protein networkhttps://string-db.org/network/679935.Alfi_2663Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2664 protein networkhttps://string-db.org/network/679935.Alfi_2664PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
Alfi_2665 protein networkhttps://string-db.org/network/679935.Alfi_2665Glycogen debranching enzyme; PFAM: Mannosyl oligosaccharide glucosidase.
Alfi_2666 protein networkhttps://string-db.org/network/679935.Alfi_2666Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_2667 protein networkhttps://string-db.org/network/679935.Alfi_2667Transcriptional regulator/sugar kinase; PFAM: ROK family.
Alfi_2668 protein networkhttps://string-db.org/network/679935.Alfi_2668N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
Alfi_2669 protein networkhttps://string-db.org/network/679935.Alfi_2669Hypothetical protein.
rsmI protein networkhttps://string-db.org/network/679935.Alfi_2670Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
Alfi_2671 protein networkhttps://string-db.org/network/679935.Alfi_2671Putative membrane protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein.
Alfi_2672 protein networkhttps://string-db.org/network/679935.Alfi_2672PFAM: Bacterial lipid A biosynthesis acyltransferase.
Alfi_2673 protein networkhttps://string-db.org/network/679935.Alfi_2673Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
Alfi_2674 protein networkhttps://string-db.org/network/679935.Alfi_2674DNA gyrase inhibitor; PFAM: Bacterial transcription activator, effector binding domain.
glnS protein networkhttps://string-db.org/network/679935.Alfi_2675PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase.
Alfi_2676 protein networkhttps://string-db.org/network/679935.Alfi_2676Hypothetical protein.
Alfi_2677 protein networkhttps://string-db.org/network/679935.Alfi_2677PFAM: SpoU rRNA Methylase family.
panB protein networkhttps://string-db.org/network/679935.Alfi_2678Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopa [...]
guaB protein networkhttps://string-db.org/network/679935.Alfi_2679Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthes [...]
Alfi_2680 protein networkhttps://string-db.org/network/679935.Alfi_2680Hypothetical protein.
guaA protein networkhttps://string-db.org/network/679935.Alfi_2681GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
Alfi_2682 protein networkhttps://string-db.org/network/679935.Alfi_2682Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
Alfi_2683 protein networkhttps://string-db.org/network/679935.Alfi_2683Hypothetical protein.
Alfi_2684 protein networkhttps://string-db.org/network/679935.Alfi_2684DNA polymerase III epsilon subunit-like 3'-5' exonuclease; PFAM: Exonuclease.
Alfi_2685 protein networkhttps://string-db.org/network/679935.Alfi_2685Hypothetical protein.
tpx protein networkhttps://string-db.org/network/679935.Alfi_2686Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against [...]
Alfi_2687 protein networkhttps://string-db.org/network/679935.Alfi_2687Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
Alfi_2688 protein networkhttps://string-db.org/network/679935.Alfi_2688Hypothetical protein; Belongs to the 'phage' integrase family.
Alfi_2689 protein networkhttps://string-db.org/network/679935.Alfi_2689Hypothetical protein.
Alfi_2690 protein networkhttps://string-db.org/network/679935.Alfi_2690Hypothetical protein.
Alfi_2691 protein networkhttps://string-db.org/network/679935.Alfi_2691Hypothetical protein.
Alfi_2692 protein networkhttps://string-db.org/network/679935.Alfi_2692PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
Alfi_2693 protein networkhttps://string-db.org/network/679935.Alfi_2693PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family; manually curated.
Alfi_2694 protein networkhttps://string-db.org/network/679935.Alfi_2694Hypothetical protein.
Alfi_2695 protein networkhttps://string-db.org/network/679935.Alfi_2695Site-specific DNA methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
Alfi_2696 protein networkhttps://string-db.org/network/679935.Alfi_2696Hypothetical protein.
Alfi_2697 protein networkhttps://string-db.org/network/679935.Alfi_2697Hypothetical protein.
Alfi_2698 protein networkhttps://string-db.org/network/679935.Alfi_2698Hypothetical protein.
Alfi_2699 protein networkhttps://string-db.org/network/679935.Alfi_2699RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4.
Alfi_2700 protein networkhttps://string-db.org/network/679935.Alfi_2700Hypothetical protein.
Alfi_2701 protein networkhttps://string-db.org/network/679935.Alfi_2701Hypothetical protein.
Alfi_2702 protein networkhttps://string-db.org/network/679935.Alfi_2702DNA methylase; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
Alfi_2703 protein networkhttps://string-db.org/network/679935.Alfi_2703Hypothetical protein.
Alfi_2704 protein networkhttps://string-db.org/network/679935.Alfi_2704KilA-N domain-containing protein; PFAM: KilA-N domain.
Alfi_2705 protein networkhttps://string-db.org/network/679935.Alfi_2705Hypothetical protein.
Alfi_2706 protein networkhttps://string-db.org/network/679935.Alfi_2706Helix-turn-helix protein.
Alfi_2709 protein networkhttps://string-db.org/network/679935.Alfi_2709Hypothetical protein.
Alfi_2710 protein networkhttps://string-db.org/network/679935.Alfi_2710Hypothetical protein.
Alfi_2711 protein networkhttps://string-db.org/network/679935.Alfi_2711Hypothetical protein.
Alfi_2712 protein networkhttps://string-db.org/network/679935.Alfi_2712Hypothetical protein.
Alfi_2713 protein networkhttps://string-db.org/network/679935.Alfi_2713Hypothetical protein.
Alfi_2714 protein networkhttps://string-db.org/network/679935.Alfi_2714Hypothetical protein.
Alfi_2715 protein networkhttps://string-db.org/network/679935.Alfi_2715Hypothetical protein.
Alfi_2716 protein networkhttps://string-db.org/network/679935.Alfi_2716Hypothetical protein.
Alfi_2717 protein networkhttps://string-db.org/network/679935.Alfi_2717Hypothetical protein.
Alfi_2718 protein networkhttps://string-db.org/network/679935.Alfi_2718PFAM: N-acetylmuramoyl-L-alanine amidase.
Alfi_2719 protein networkhttps://string-db.org/network/679935.Alfi_2719Hypothetical protein.
Alfi_2720 protein networkhttps://string-db.org/network/679935.Alfi_2720Hypothetical protein.
Alfi_2721 protein networkhttps://string-db.org/network/679935.Alfi_2721Hypothetical protein.
Alfi_2722 protein networkhttps://string-db.org/network/679935.Alfi_2722Hypothetical protein.
Alfi_2723 protein networkhttps://string-db.org/network/679935.Alfi_2723Hypothetical protein.
Alfi_2724 protein networkhttps://string-db.org/network/679935.Alfi_2724Hypothetical protein.
Alfi_2726 protein networkhttps://string-db.org/network/679935.Alfi_2726FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
Alfi_2727 protein networkhttps://string-db.org/network/679935.Alfi_2727PFAM: NADPH-dependent FMN reductase.
Alfi_2728 protein networkhttps://string-db.org/network/679935.Alfi_2728PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
Alfi_2729 protein networkhttps://string-db.org/network/679935.Alfi_2729ABC-type transport system involved in Fe-S cluster assembly, permease component; PFAM: Uncharacterized protein family (UPF0051).
Alfi_2730 protein networkhttps://string-db.org/network/679935.Alfi_2730Cysteine desulfurase-like protein, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alan [...]
tmk protein networkhttps://string-db.org/network/679935.Alfi_2731Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
Alfi_2732 protein networkhttps://string-db.org/network/679935.Alfi_2732PFAM: DoxX.
Alfi_2733 protein networkhttps://string-db.org/network/679935.Alfi_2733TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_2734 protein networkhttps://string-db.org/network/679935.Alfi_2734Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Alfi_2735 protein networkhttps://string-db.org/network/679935.Alfi_2735PFAM: Outer membrane efflux protein.
Alfi_2736 protein networkhttps://string-db.org/network/679935.Alfi_2736Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein.
Alfi_2738 protein networkhttps://string-db.org/network/679935.Alfi_2738Hypothetical protein; PFAM: Tetratricopeptide repeat.
Alfi_2739 protein networkhttps://string-db.org/network/679935.Alfi_2739Hypothetical protein.
Alfi_2740 protein networkhttps://string-db.org/network/679935.Alfi_2740PFAM: Protein of unknown function(DUF2089).
Alfi_2741 protein networkhttps://string-db.org/network/679935.Alfi_2741Hypothetical protein.
mltG protein networkhttps://string-db.org/network/679935.Alfi_2743Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
Alfi_2744 protein networkhttps://string-db.org/network/679935.Alfi_2744Translation factor SUA5; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
Alfi_2745 protein networkhttps://string-db.org/network/679935.Alfi_2745Hypothetical protein.
Alfi_2746 protein networkhttps://string-db.org/network/679935.Alfi_2746PFAM: Glycosyl transferase family 2.
Alfi_2747 protein networkhttps://string-db.org/network/679935.Alfi_2747Hypothetical protein.
Alfi_2748 protein networkhttps://string-db.org/network/679935.Alfi_2748Hypothetical protein.
Alfi_2749 protein networkhttps://string-db.org/network/679935.Alfi_2749PFAM: DNA/RNA non-specific endonuclease.
Alfi_2750 protein networkhttps://string-db.org/network/679935.Alfi_2750Putative extracellular nuclease; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2751 protein networkhttps://string-db.org/network/679935.Alfi_2751PFAM: TonB dependent receptor.
Alfi_2752 protein networkhttps://string-db.org/network/679935.Alfi_2752Hypothetical protein.
Alfi_2753 protein networkhttps://string-db.org/network/679935.Alfi_2753Phosphoglycerol transferase family protein, alkaline phosphatase superfamily; PFAM: Sulfatase.
Alfi_2754 protein networkhttps://string-db.org/network/679935.Alfi_2754Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
Alfi_2755 protein networkhttps://string-db.org/network/679935.Alfi_2755Putative transcriptional regulator; PFAM: Helix-turn-helix.
Alfi_2756 protein networkhttps://string-db.org/network/679935.Alfi_2756Hypothetical protein.
Alfi_2757 protein networkhttps://string-db.org/network/679935.Alfi_2757Hypothetical protein.
Alfi_2758 protein networkhttps://string-db.org/network/679935.Alfi_2758PFAM: Acyl-ACP thioesterase.
Alfi_2759 protein networkhttps://string-db.org/network/679935.Alfi_2759Bacterioferritin (cytochrome b1); Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral co [...]
Alfi_2760 protein networkhttps://string-db.org/network/679935.Alfi_2760Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_2762 protein networkhttps://string-db.org/network/679935.Alfi_2762Putative transcriptional regulator with cupin domain; PFAM: Cupin domain.
Alfi_2763 protein networkhttps://string-db.org/network/679935.Alfi_2763Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
Alfi_2764 protein networkhttps://string-db.org/network/679935.Alfi_2764PFAM: Tetratricopeptide repeat.
era protein networkhttps://string-db.org/network/679935.Alfi_2765GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
Alfi_2766 protein networkhttps://string-db.org/network/679935.Alfi_2766PFAM: Nitroreductase family.
ffh protein networkhttps://string-db.org/network/679935.Alfi_2767Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of [...]
Alfi_2768 protein networkhttps://string-db.org/network/679935.Alfi_2768Hypothetical protein.
Alfi_2769 protein networkhttps://string-db.org/network/679935.Alfi_2769Hypothetical protein.
Alfi_2770 protein networkhttps://string-db.org/network/679935.Alfi_2770PFAM: Thioesterase superfamily.
Alfi_2772 protein networkhttps://string-db.org/network/679935.Alfi_2772Na+/H+ antiporter NhaD-like permease; PFAM: Citrate transporter.
Alfi_2773 protein networkhttps://string-db.org/network/679935.Alfi_2773Hypothetical protein.
Alfi_2774 protein networkhttps://string-db.org/network/679935.Alfi_2774Hypothetical protein.
Alfi_2776 protein networkhttps://string-db.org/network/679935.Alfi_2776Hypothetical protein.
Alfi_2777 protein networkhttps://string-db.org/network/679935.Alfi_2777Putative membrane protein; PFAM: Transglycosylase associated protein.
Alfi_2778 protein networkhttps://string-db.org/network/679935.Alfi_2778TIGRFAM: uncharacterized protein TIGR03905.
Alfi_2779 protein networkhttps://string-db.org/network/679935.Alfi_2779PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
Alfi_2780 protein networkhttps://string-db.org/network/679935.Alfi_2780PFAM: Protein of unknown function (DUF1573).
Alfi_2781 protein networkhttps://string-db.org/network/679935.Alfi_2781PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB.
Alfi_2782 protein networkhttps://string-db.org/network/679935.Alfi_2782PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family.
Alfi_2783 protein networkhttps://string-db.org/network/679935.Alfi_2783Hypothetical protein.
Alfi_2784 protein networkhttps://string-db.org/network/679935.Alfi_2784PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
Alfi_2785 protein networkhttps://string-db.org/network/679935.Alfi_2785PFAM: Protein of unknown function (DUF2795).
Alfi_2786 protein networkhttps://string-db.org/network/679935.Alfi_2786PFAM: Calcineurin-like phosphoesterase.
Alfi_2787 protein networkhttps://string-db.org/network/679935.Alfi_2787Hypothetical protein.
Alfi_2788 protein networkhttps://string-db.org/network/679935.Alfi_2788Hypothetical protein.
Alfi_2789 protein networkhttps://string-db.org/network/679935.Alfi_2789TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_2790 protein networkhttps://string-db.org/network/679935.Alfi_2790Methyltransferase family protein; PFAM: Methyltransferase domain.
Alfi_2791 protein networkhttps://string-db.org/network/679935.Alfi_2791Hypothetical protein; Belongs to the CvfB family.
Alfi_2792 protein networkhttps://string-db.org/network/679935.Alfi_2792Putative hydrolase, CocE/NonD family; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family.
Alfi_2793 protein networkhttps://string-db.org/network/679935.Alfi_2793Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
Alfi_2794 protein networkhttps://string-db.org/network/679935.Alfi_2794Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
Alfi_2795 protein networkhttps://string-db.org/network/679935.Alfi_2795Hypothetical protein.
Alfi_2796 protein networkhttps://string-db.org/network/679935.Alfi_2796Hypothetical protein.
ispF protein networkhttps://string-db.org/network/679935.Alfi_27972-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
Alfi_2798 protein networkhttps://string-db.org/network/679935.Alfi_2798Aminoacyl-histidine dipeptidase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: Xaa-His dipeptidase.
Alfi_2799 protein networkhttps://string-db.org/network/679935.Alfi_2799Hypothetical protein.
Alfi_2800 protein networkhttps://string-db.org/network/679935.Alfi_2800Hypothetical protein.
Alfi_2801 protein networkhttps://string-db.org/network/679935.Alfi_2801Hypothetical protein.
Alfi_2802 protein networkhttps://string-db.org/network/679935.Alfi_2802PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; Belongs to the AlaDH/PNT family.
Alfi_2803 protein networkhttps://string-db.org/network/679935.Alfi_2803Hypothetical protein.
Alfi_2804 protein networkhttps://string-db.org/network/679935.Alfi_2804ABC-type (unclassified) transport system, ATPase component.
obg protein networkhttps://string-db.org/network/679935.Alfi_2805Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a ro [...]
Alfi_2806 protein networkhttps://string-db.org/network/679935.Alfi_2806Hypothetical protein.
Alfi_2807 protein networkhttps://string-db.org/network/679935.Alfi_2807Hypothetical protein.
Alfi_2808 protein networkhttps://string-db.org/network/679935.Alfi_2808Phosphoserine phosphatase SerB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase Ser [...]
Alfi_2809 protein networkhttps://string-db.org/network/679935.Alfi_2809PFAM: Mechanosensitive ion channel.
Alfi_2810 protein networkhttps://string-db.org/network/679935.Alfi_2810Hypothetical protein.
Alfi_2811 protein networkhttps://string-db.org/network/679935.Alfi_2811Hypothetical protein.
mgsA protein networkhttps://string-db.org/network/679935.Alfi_2812Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
Alfi_2813 protein networkhttps://string-db.org/network/679935.Alfi_2813tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridin [...]
Alfi_2814 protein networkhttps://string-db.org/network/679935.Alfi_2814CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.
argS protein networkhttps://string-db.org/network/679935.Alfi_2815arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.
Alfi_2816 protein networkhttps://string-db.org/network/679935.Alfi_2816Transposase; PFAM: Integrase core domain; manually curated.
Alfi_2817 protein networkhttps://string-db.org/network/679935.Alfi_2817Transposase.
Alfi_2818 protein networkhttps://string-db.org/network/679935.Alfi_2818Metal-dependent hydrolase, beta-lactamase superfamily I.
Alfi_2819 protein networkhttps://string-db.org/network/679935.Alfi_2819Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
tatC-2 protein networkhttps://string-db.org/network/679935.Alfi_2820Twin arginine targeting protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine mot [...]
tatA-2 protein networkhttps://string-db.org/network/679935.Alfi_2821Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
Alfi_2822 protein networkhttps://string-db.org/network/679935.Alfi_2822PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase.
engB protein networkhttps://string-db.org/network/679935.Alfi_2823Ribosome biogenesis GTP-binding protein YsxC/EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPas [...]
Alfi_2824 protein networkhttps://string-db.org/network/679935.Alfi_2824Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
Alfi_2827 protein networkhttps://string-db.org/network/679935.Alfi_2827Flagellar biosynthesis/type III secretory pathway protein; PFAM: Lipid A 3-O-deacylase (PagL).
Alfi_2828 protein networkhttps://string-db.org/network/679935.Alfi_2828ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter.
Alfi_2829 protein networkhttps://string-db.org/network/679935.Alfi_2829PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain.
Alfi_2830 protein networkhttps://string-db.org/network/679935.Alfi_2830Hypothetical protein.
Alfi_2831 protein networkhttps://string-db.org/network/679935.Alfi_2831PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
Alfi_2832 protein networkhttps://string-db.org/network/679935.Alfi_2832Hypothetical protein.
Alfi_2833 protein networkhttps://string-db.org/network/679935.Alfi_2833Hypothetical protein.
Alfi_2834 protein networkhttps://string-db.org/network/679935.Alfi_2834Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
Alfi_2836 protein networkhttps://string-db.org/network/679935.Alfi_2836Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
Alfi_2837 protein networkhttps://string-db.org/network/679935.Alfi_2837Hypothetical protein.
dacA protein networkhttps://string-db.org/network/679935.Alfi_2838TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
Alfi_2839 protein networkhttps://string-db.org/network/679935.Alfi_2839PFAM: Outer membrane protein (OmpH-like).
ruvA protein networkhttps://string-db.org/network/679935.Alfi_2840Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promot [...]
Alfi_2841 protein networkhttps://string-db.org/network/679935.Alfi_2841Hypothetical protein.
Alfi_2842 protein networkhttps://string-db.org/network/679935.Alfi_2842Hypothetical protein.
Alfi_2843 protein networkhttps://string-db.org/network/679935.Alfi_2843Hypothetical protein.
Alfi_2844 protein networkhttps://string-db.org/network/679935.Alfi_2844Hypothetical protein.
dnaK protein networkhttps://string-db.org/network/679935.Alfi_2845Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
Alfi_2846 protein networkhttps://string-db.org/network/679935.Alfi_2846PFAM: Alpha-L-fucosidase.
secD protein networkhttps://string-db.org/network/679935.Alfi_2849Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) t [...]
Alfi_2850 protein networkhttps://string-db.org/network/679935.Alfi_2850Hypothetical protein.
coaE protein networkhttps://string-db.org/network/679935.Alfi_2851dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
Alfi_2852 protein networkhttps://string-db.org/network/679935.Alfi_2852Dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase.
lolD protein networkhttps://string-db.org/network/679935.Alfi_2853ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from th [...]
Alfi_2854 protein networkhttps://string-db.org/network/679935.Alfi_2854TIGR02757 family protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein.
Alfi_2855 protein networkhttps://string-db.org/network/679935.Alfi_2855Putative O-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
Alfi_2856 protein networkhttps://string-db.org/network/679935.Alfi_2856Hypothetical protein.
Alfi_2857 protein networkhttps://string-db.org/network/679935.Alfi_2857PFAM: DNA alkylation repair enzyme.
Alfi_2858 protein networkhttps://string-db.org/network/679935.Alfi_2858PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
Alfi_2859 protein networkhttps://string-db.org/network/679935.Alfi_2859PFAM: NAD dependent epimerase/dehydratase family.
radA protein networkhttps://string-db.org/network/679935.Alfi_2860DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...]
Alfi_2861 protein networkhttps://string-db.org/network/679935.Alfi_2861Hypothetical protein.
Alfi_2862 protein networkhttps://string-db.org/network/679935.Alfi_2862Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
Alfi_2863 protein networkhttps://string-db.org/network/679935.Alfi_2863RIP metalloprotease RseP; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP.
dxr protein networkhttps://string-db.org/network/679935.Alfi_28641-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
Alfi_2865 protein networkhttps://string-db.org/network/679935.Alfi_2865Membrane-bound metallopeptidase; PFAM: Peptidase family M23.
Alfi_2866 protein networkhttps://string-db.org/network/679935.Alfi_2866dTDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase.
Alfi_2867 protein networkhttps://string-db.org/network/679935.Alfi_2867Hypothetical protein.
Alfi_2868 protein networkhttps://string-db.org/network/679935.Alfi_2868Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
Alfi_2869 protein networkhttps://string-db.org/network/679935.Alfi_2869PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
Alfi_2870 protein networkhttps://string-db.org/network/679935.Alfi_2870Glycosidase; PFAM: Alpha amylase, catalytic domain.
Alfi_2871 protein networkhttps://string-db.org/network/679935.Alfi_2871Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: Domain of unknown function (DUF477).
Alfi_2872 protein networkhttps://string-db.org/network/679935.Alfi_2872Hypothetical protein; PFAM: LemA family.
Alfi_2873 protein networkhttps://string-db.org/network/679935.Alfi_2873Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
Alfi_2874 protein networkhttps://string-db.org/network/679935.Alfi_2874Hypothetical protein.
Alfi_2875 protein networkhttps://string-db.org/network/679935.Alfi_2875Putative transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein; Bacterial transcription activator, effector binding domain.
Alfi_2876 protein networkhttps://string-db.org/network/679935.Alfi_2876PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
Alfi_2877 protein networkhttps://string-db.org/network/679935.Alfi_2877Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus.
Alfi_2878 protein networkhttps://string-db.org/network/679935.Alfi_2878PFAM: DNA gyrase/topoisomerase IV, subunit A.
aroK protein networkhttps://string-db.org/network/679935.Alfi_2879Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
murI protein networkhttps://string-db.org/network/679935.Alfi_2880Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
Alfi_2881 protein networkhttps://string-db.org/network/679935.Alfi_2881DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
Alfi_2882 protein networkhttps://string-db.org/network/679935.Alfi_2882Hypothetical protein.
gyrA protein networkhttps://string-db.org/network/679935.Alfi_2884DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
Alfi_2885 protein networkhttps://string-db.org/network/679935.Alfi_2885PFAM: Tetratricopeptide repeat.
Alfi_2886 protein networkhttps://string-db.org/network/679935.Alfi_2886Putative ATPase.
Alfi_2887 protein networkhttps://string-db.org/network/679935.Alfi_2887PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
Alfi_2888 protein networkhttps://string-db.org/network/679935.Alfi_2888PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
Alfi_2889 protein networkhttps://string-db.org/network/679935.Alfi_2889PFAM: Clostripain family.
Alfi_2890 protein networkhttps://string-db.org/network/679935.Alfi_2890Hypothetical protein.
dapA protein networkhttps://string-db.org/network/679935.Alfi_2891Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
ligA protein networkhttps://string-db.org/network/679935.Alfi_2892DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...]
Alfi_2893 protein networkhttps://string-db.org/network/679935.Alfi_2893Hypothetical protein.
Alfi_2894 protein networkhttps://string-db.org/network/679935.Alfi_2894Leucine Rich Repeat (LRR)-containing protein.
purA protein networkhttps://string-db.org/network/679935.Alfi_2895Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
Alfi_2896 protein networkhttps://string-db.org/network/679935.Alfi_2896Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
Alfi_2897 protein networkhttps://string-db.org/network/679935.Alfi_2897Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
Alfi_2898 protein networkhttps://string-db.org/network/679935.Alfi_2898PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase C terminal; Acyl-CoA dehydrogenase, N-terminal domain.
Alfi_2899 protein networkhttps://string-db.org/network/679935.Alfi_2899Putative transcriptional regulator.
Alfi_2900 protein networkhttps://string-db.org/network/679935.Alfi_2900Hypothetical protein.
glsA protein networkhttps://string-db.org/network/679935.Alfi_2901L-glutaminase; PFAM: Glutaminase; TIGRFAM: glutaminase A; Belongs to the glutaminase family.
Alfi_2902 protein networkhttps://string-db.org/network/679935.Alfi_2902Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: Amino acid permease; TIGRFAM: putative glutamate/gamma-aminobutyrate antiporter; TC 2.A.3.
Alfi_2903 protein networkhttps://string-db.org/network/679935.Alfi_2903Hypothetical protein.
Alfi_2904 protein networkhttps://string-db.org/network/679935.Alfi_2904PFAM: Rubrerythrin.
Alfi_2905 protein networkhttps://string-db.org/network/679935.Alfi_2905PFAM: Protein of unknown function (DUF1469).
Alfi_2906 protein networkhttps://string-db.org/network/679935.Alfi_2906Hypothetical protein.
Alfi_2907 protein networkhttps://string-db.org/network/679935.Alfi_2907PFAM: Protein of unknown function (DUF1273).
Alfi_2908 protein networkhttps://string-db.org/network/679935.Alfi_2908Hypothetical protein.
Alfi_2909 protein networkhttps://string-db.org/network/679935.Alfi_2909Hypothetical protein.
Alfi_2910 protein networkhttps://string-db.org/network/679935.Alfi_29106-phosphofructokinase; PFAM: Phosphofructokinase.
Alfi_2911 protein networkhttps://string-db.org/network/679935.Alfi_2911Hypothetical protein.
Alfi_2912 protein networkhttps://string-db.org/network/679935.Alfi_2912PFAM: 'Cold-shock' DNA-binding domain.
Alfi_2913 protein networkhttps://string-db.org/network/679935.Alfi_2913Hypothetical protein.
Alfi_2914 protein networkhttps://string-db.org/network/679935.Alfi_2914PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM enzyme, rSAM/lipoprotein system.
Alfi_2918 protein networkhttps://string-db.org/network/679935.Alfi_2918Uncharacterized protein involved in outer membrane biogenesis; PFAM: Domain of Unknown Function (DUF748).
Alfi_2919 protein networkhttps://string-db.org/network/679935.Alfi_2919PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
Alfi_2920 protein networkhttps://string-db.org/network/679935.Alfi_2920Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Alfi_2921 protein networkhttps://string-db.org/network/679935.Alfi_2921PFAM: NADH:flavin oxidoreductase / NADH oxidase family.
Alfi_2922 protein networkhttps://string-db.org/network/679935.Alfi_2922PFAM: 3-oxo-5-alpha-steroid 4-dehydrogenase.
Alfi_2923 protein networkhttps://string-db.org/network/679935.Alfi_2923Hypothetical protein.
Alfi_2924 protein networkhttps://string-db.org/network/679935.Alfi_2924PFAM: Pyridoxal-dependent decarboxylase conserved domain; TIGRFAM: glutamate decarboxylase; Belongs to the group II decarboxylase family.
Alfi_2925 protein networkhttps://string-db.org/network/679935.Alfi_2925Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
Alfi_2926 protein networkhttps://string-db.org/network/679935.Alfi_2926Hypothetical protein.
Alfi_2927 protein networkhttps://string-db.org/network/679935.Alfi_2927Hypothetical protein.
Alfi_2928 protein networkhttps://string-db.org/network/679935.Alfi_2928Hypothetical protein.
cobB protein networkhttps://string-db.org/network/679935.Alfi_2929NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
Alfi_2930 protein networkhttps://string-db.org/network/679935.Alfi_2930methylmalonyl-CoA mutase metallochaperone MeaB; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.
Alfi_2931 protein networkhttps://string-db.org/network/679935.Alfi_2931Hypothetical protein.
Alfi_2932 protein networkhttps://string-db.org/network/679935.Alfi_2932Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_2933 protein networkhttps://string-db.org/network/679935.Alfi_2933methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
Alfi_2934 protein networkhttps://string-db.org/network/679935.Alfi_2934acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.
Alfi_2936 protein networkhttps://string-db.org/network/679935.Alfi_2936acetyl/propionyl-CoA carboxylase, alpha subunit; PFAM: Biotin-requiring enzyme.
Alfi_2937 protein networkhttps://string-db.org/network/679935.Alfi_2937PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit.
rplM protein networkhttps://string-db.org/network/679935.Alfi_2939LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stage [...]
rpsI protein networkhttps://string-db.org/network/679935.Alfi_2940PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
rpsB protein networkhttps://string-db.org/network/679935.Alfi_2941PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.
tsf protein networkhttps://string-db.org/network/679935.Alfi_2942Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
Alfi_2943 protein networkhttps://string-db.org/network/679935.Alfi_2943Hypothetical protein.
Alfi_2944 protein networkhttps://string-db.org/network/679935.Alfi_2944Hypothetical protein.
Alfi_2945 protein networkhttps://string-db.org/network/679935.Alfi_2945ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter.
Alfi_2946 protein networkhttps://string-db.org/network/679935.Alfi_2946ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
Alfi_2947 protein networkhttps://string-db.org/network/679935.Alfi_2947PFAM: Protein of unknown function (DUF2807).
Alfi_2948 protein networkhttps://string-db.org/network/679935.Alfi_2948PFAM: Exodeoxyribonuclease V, gamma subunit.
Alfi_2949 protein networkhttps://string-db.org/network/679935.Alfi_2949PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
Alfi_2950 protein networkhttps://string-db.org/network/679935.Alfi_2950Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
Alfi_2951 protein networkhttps://string-db.org/network/679935.Alfi_2951Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
alaS protein networkhttps://string-db.org/network/679935.Alfi_2952alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
gpmI protein networkhttps://string-db.org/network/679935.Alfi_2953Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
Alfi_2954 protein networkhttps://string-db.org/network/679935.Alfi_2954Hypothetical protein.
Alfi_2955 protein networkhttps://string-db.org/network/679935.Alfi_2955Hypothetical protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain.
Alfi_2956 protein networkhttps://string-db.org/network/679935.Alfi_2956Lactate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
Alfi_2957 protein networkhttps://string-db.org/network/679935.Alfi_2957Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: ThiF family.
Alfi_2958 protein networkhttps://string-db.org/network/679935.Alfi_2958PFAM: TatD related DNase.
nqrA protein networkhttps://string-db.org/network/679935.Alfi_2959NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
nqrB protein networkhttps://string-db.org/network/679935.Alfi_2960NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
nqrC protein networkhttps://string-db.org/network/679935.Alfi_2961NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
nqrD protein networkhttps://string-db.org/network/679935.Alfi_2962NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
nqrE protein networkhttps://string-db.org/network/679935.Alfi_2963NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
nqrF protein networkhttps://string-db.org/network/679935.Alfi_2964NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) i [...]
hppA protein networkhttps://string-db.org/network/679935.Alfi_2965Vacuolar-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+) [...]
Alfi_2966 protein networkhttps://string-db.org/network/679935.Alfi_2966PFAM: Protein of unknown function (DUF2776).
Alfi_2967 protein networkhttps://string-db.org/network/679935.Alfi_2967PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, [...]
Alfi_2968 protein networkhttps://string-db.org/network/679935.Alfi_2968Hypothetical protein.
Alfi_2969 protein networkhttps://string-db.org/network/679935.Alfi_2969Hypothetical protein.
Alfi_2970 protein networkhttps://string-db.org/network/679935.Alfi_2970Putative permease; PFAM: Domain of unknown function DUF20.
Alfi_2971 protein networkhttps://string-db.org/network/679935.Alfi_2971Pyruvate/oxaloacetate carboxyltransferase; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain.
mscL protein networkhttps://string-db.org/network/679935.Alfi_2972Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes w [...]
Alfi_2973 protein networkhttps://string-db.org/network/679935.Alfi_2973PFAM: Ion channel.
hisI protein networkhttps://string-db.org/network/679935.Alfi_2975PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.
hisF protein networkhttps://string-db.org/network/679935.Alfi_2976Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that p [...]
hisA protein networkhttps://string-db.org/network/679935.Alfi_29771-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carbox [...]
hisH protein networkhttps://string-db.org/network/679935.Alfi_2978Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glu [...]
hisB protein networkhttps://string-db.org/network/679935.Alfi_2979PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; Belongs to the imidazole [...]
hisC protein networkhttps://string-db.org/network/679935.Alfi_2980PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotra [...]
hisD protein networkhttps://string-db.org/network/679935.Alfi_2981Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
hisG protein networkhttps://string-db.org/network/679935.Alfi_2982ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...]
Alfi_2983 protein networkhttps://string-db.org/network/679935.Alfi_2983PFAM: Protein of unknown function (DUF1271).
Alfi_2985 protein networkhttps://string-db.org/network/679935.Alfi_2985PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
Alfi_2986 protein networkhttps://string-db.org/network/679935.Alfi_2986Hypothetical protein.
Alfi_2987 protein networkhttps://string-db.org/network/679935.Alfi_2987PFAM: Yqey-like protein.
Alfi_2988 protein networkhttps://string-db.org/network/679935.Alfi_2988Hypothetical protein.
Alfi_2989 protein networkhttps://string-db.org/network/679935.Alfi_2989Hypothetical protein.
Alfi_2990 protein networkhttps://string-db.org/network/679935.Alfi_2990PFAM: Protein of unknown function, DUF486.
Alfi_2991 protein networkhttps://string-db.org/network/679935.Alfi_2991PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
Alfi_2992 protein networkhttps://string-db.org/network/679935.Alfi_2992Hypothetical protein.
Alfi_2993 protein networkhttps://string-db.org/network/679935.Alfi_2993ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
Alfi_2994 protein networkhttps://string-db.org/network/679935.Alfi_2994Glycosyltransferase; PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1.
Alfi_2995 protein networkhttps://string-db.org/network/679935.Alfi_2995Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.
Alfi_2996 protein networkhttps://string-db.org/network/679935.Alfi_2996Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_2997 protein networkhttps://string-db.org/network/679935.Alfi_2997Hypothetical protein.
Alfi_2998 protein networkhttps://string-db.org/network/679935.Alfi_2998Putative membrane protein involved in D-alanine export; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
Alfi_2999 protein networkhttps://string-db.org/network/679935.Alfi_2999Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_3000 protein networkhttps://string-db.org/network/679935.Alfi_3000Glycosyltransferase; PFAM: Glycosyl transferases group 1; manually curated.
Alfi_3001 protein networkhttps://string-db.org/network/679935.Alfi_3001Hypothetical protein.
Alfi_3002 protein networkhttps://string-db.org/network/679935.Alfi_3002Glycosyltransferase; PFAM: Glycosyl transferases group 1.
Alfi_3003 protein networkhttps://string-db.org/network/679935.Alfi_3003PFAM: Polysaccharide pyruvyl transferase.
Alfi_3004 protein networkhttps://string-db.org/network/679935.Alfi_3004PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
Alfi_3005 protein networkhttps://string-db.org/network/679935.Alfi_3005Hypothetical protein.
Alfi_3006 protein networkhttps://string-db.org/network/679935.Alfi_3006dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose d [...]
Alfi_3007 protein networkhttps://string-db.org/network/679935.Alfi_3007dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
Alfi_3008 protein networkhttps://string-db.org/network/679935.Alfi_3008dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehy [...]
Alfi_3009 protein networkhttps://string-db.org/network/679935.Alfi_3009Glucose-1-phosphate thymidylyltransferase, short form; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phos [...]
Alfi_3010 protein networkhttps://string-db.org/network/679935.Alfi_3010PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
Alfi_3011 protein networkhttps://string-db.org/network/679935.Alfi_3011PFAM: Transcription termination factor nusG.
Alfi_3012 protein networkhttps://string-db.org/network/679935.Alfi_3012Hypothetical protein.
Alfi_3014 protein networkhttps://string-db.org/network/679935.Alfi_3014Saccharopine dehydrogenase-like oxidoreductase; PFAM: Saccharopine dehydrogenase.
Alfi_3015 protein networkhttps://string-db.org/network/679935.Alfi_3015Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
Alfi_3016 protein networkhttps://string-db.org/network/679935.Alfi_3016PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: carboxynorspermidine decarboxylase.
Alfi_3017 protein networkhttps://string-db.org/network/679935.Alfi_3017Cysteate synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteate synthase.
Alfi_3018 protein networkhttps://string-db.org/network/679935.Alfi_3018Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
Alfi_3019 protein networkhttps://string-db.org/network/679935.Alfi_3019PFAM: Formiminotransferase domain, N-terminal subdomain; Formiminotransferase-cyclodeaminase; Formiminotransferase domain; TIGRFAM: glutamate formiminotransferase.
hutU protein networkhttps://string-db.org/network/679935.Alfi_3020Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
Alfi_3021 protein networkhttps://string-db.org/network/679935.Alfi_3021PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase.
hutI protein networkhttps://string-db.org/network/679935.Alfi_3022Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase.
msrA protein networkhttps://string-db.org/network/679935.Alfi_3023methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxid [...]
Alfi_3026 protein networkhttps://string-db.org/network/679935.Alfi_3026PFAM: Domain of unknown function (DUF1848).
Alfi_3027 protein networkhttps://string-db.org/network/679935.Alfi_3027Hypothetical protein.
Alfi_3028 protein networkhttps://string-db.org/network/679935.Alfi_3028Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Aminotransferase class I and II.
Alfi_3029 protein networkhttps://string-db.org/network/679935.Alfi_3029PFAM: Cysteine dioxygenase type I.
Alfi_3032 protein networkhttps://string-db.org/network/679935.Alfi_3032N6-adenine-specific methylase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family.
Alfi_3033 protein networkhttps://string-db.org/network/679935.Alfi_3033Hypothetical protein.
Alfi_3034 protein networkhttps://string-db.org/network/679935.Alfi_3034Hypothetical protein.
Alfi_3035 protein networkhttps://string-db.org/network/679935.Alfi_3035Uncharacterized P-loop hydrolase UPF0079; PFAM: PIF1 helicase.
Alfi_3036 protein networkhttps://string-db.org/network/679935.Alfi_3036G:T/U mismatch-specific DNA glycosylase.
mutS protein networkhttps://string-db.org/network/679935.Alfi_3037DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
udk protein networkhttps://string-db.org/network/679935.Alfi_3038PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase.
gyrB protein networkhttps://string-db.org/network/679935.Alfi_3039DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
Alfi_3040 protein networkhttps://string-db.org/network/679935.Alfi_3040Putative ATPase involved in cell division; PFAM: ABC transporter.
Alfi_3041 protein networkhttps://string-db.org/network/679935.Alfi_3041PAS domain S-box; PFAM: Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.
Alfi_3042 protein networkhttps://string-db.org/network/679935.Alfi_3042Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_3043 protein networkhttps://string-db.org/network/679935.Alfi_3043Hypothetical protein.
Alfi_3044 protein networkhttps://string-db.org/network/679935.Alfi_3044Hypothetical protein.
Alfi_3045 protein networkhttps://string-db.org/network/679935.Alfi_3045Hypothetical protein.
Alfi_3046 protein networkhttps://string-db.org/network/679935.Alfi_3046Hypothetical protein.
Alfi_3047 protein networkhttps://string-db.org/network/679935.Alfi_3047WD40-like repeat protein; PFAM: Calcineurin-like phosphoesterase; PQQ enzyme repeat.
purT protein networkhttps://string-db.org/network/679935.Alfi_3048Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide [...]
Alfi_3049 protein networkhttps://string-db.org/network/679935.Alfi_3049Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligop [...]
Alfi_3050 protein networkhttps://string-db.org/network/679935.Alfi_3050PFAM: Acetyltransferase (GNAT) family.
Alfi_3051 protein networkhttps://string-db.org/network/679935.Alfi_3051PFAM: Aminotransferase class I and II.
Alfi_3052 protein networkhttps://string-db.org/network/679935.Alfi_3052PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
Alfi_3053 protein networkhttps://string-db.org/network/679935.Alfi_3053Putative effector of murein hydrolase; PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein.
Alfi_3054 protein networkhttps://string-db.org/network/679935.Alfi_3054Putative effector of murein hydrolase LrgA; PFAM: LrgA family.
Alfi_3055 protein networkhttps://string-db.org/network/679935.Alfi_3055Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) fam [...]
Alfi_3056 protein networkhttps://string-db.org/network/679935.Alfi_3056Arylsulfatase A family protein; PFAM: Sulfatase.
Alfi_3057 protein networkhttps://string-db.org/network/679935.Alfi_3057PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
Alfi_3058 protein networkhttps://string-db.org/network/679935.Alfi_3058PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) famil [...]
Alfi_3059 protein networkhttps://string-db.org/network/679935.Alfi_3059PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_3060 protein networkhttps://string-db.org/network/679935.Alfi_3060PFAM: Histone H1-like protein Hc1.
Alfi_3061 protein networkhttps://string-db.org/network/679935.Alfi_3061Putative membrane-associated, metal-dependent hydrolase; PFAM: Sulfatase; Domain of unknown function (DUF1705).
Alfi_3062 protein networkhttps://string-db.org/network/679935.Alfi_3062Hypothetical protein.
Alfi_3063 protein networkhttps://string-db.org/network/679935.Alfi_3063PFAM: Bacterial protein of unknown function (YtfJ_HI0045).
Alfi_3064 protein networkhttps://string-db.org/network/679935.Alfi_3064Putative membrane protein; PFAM: DoxX.
Alfi_3065 protein networkhttps://string-db.org/network/679935.Alfi_3065Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
Alfi_3066 protein networkhttps://string-db.org/network/679935.Alfi_3066Hypothetical protein.
Alfi_3067 protein networkhttps://string-db.org/network/679935.Alfi_3067PFAM: Chloramphenicol acetyltransferase.
Alfi_3068 protein networkhttps://string-db.org/network/679935.Alfi_30683-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
glyA protein networkhttps://string-db.org/network/679935.Alfi_3069Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the [...]
Alfi_3070 protein networkhttps://string-db.org/network/679935.Alfi_3070PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein.
Alfi_3071 protein networkhttps://string-db.org/network/679935.Alfi_3071Esterase/lipase; PFAM: Carboxylesterase.
Alfi_3072 protein networkhttps://string-db.org/network/679935.Alfi_3072PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, mannitol-sp [...]
Alfi_3073 protein networkhttps://string-db.org/network/679935.Alfi_3073PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
Alfi_3074 protein networkhttps://string-db.org/network/679935.Alfi_3074Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate ac [...]
Alfi_3075 protein networkhttps://string-db.org/network/679935.Alfi_3075Esterase/lipase; PFAM: Prolyl oligopeptidase family.
Alfi_3076 protein networkhttps://string-db.org/network/679935.Alfi_3076Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_3077 protein networkhttps://string-db.org/network/679935.Alfi_3077PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
Alfi_3078 protein networkhttps://string-db.org/network/679935.Alfi_3078PFAM: Fibronectin type III domain.
Alfi_3079 protein networkhttps://string-db.org/network/679935.Alfi_3079Hypothetical protein.
Alfi_3080 protein networkhttps://string-db.org/network/679935.Alfi_3080TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_3081 protein networkhttps://string-db.org/network/679935.Alfi_3081RagB/SusD family protein; PFAM: SusD family.
Alfi_3082 protein networkhttps://string-db.org/network/679935.Alfi_3082Hypothetical protein.
Alfi_3083 protein networkhttps://string-db.org/network/679935.Alfi_3083PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_3084 protein networkhttps://string-db.org/network/679935.Alfi_3084Hypothetical protein (Fib_succ_major); PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain.
Alfi_3085 protein networkhttps://string-db.org/network/679935.Alfi_3085RagB/SusD family protein; PFAM: SusD family.
Alfi_3086 protein networkhttps://string-db.org/network/679935.Alfi_3086TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, sig [...]
Alfi_3087 protein networkhttps://string-db.org/network/679935.Alfi_3087Fe2+-dicitrate sensor, membrane component; PFAM: FecR protein.
Alfi_3088 protein networkhttps://string-db.org/network/679935.Alfi_3088PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; Belongs to the sigma-70 factor [...]
mtlD protein networkhttps://string-db.org/network/679935.Alfi_3089PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain.
Alfi_3090 protein networkhttps://string-db.org/network/679935.Alfi_3090PFAM: Glycerophosphoryl diester phosphodiesterase family.
Alfi_3091 protein networkhttps://string-db.org/network/679935.Alfi_3091Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
glmS protein networkhttps://string-db.org/network/679935.Alfi_3092Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [...]
Alfi_3093 protein networkhttps://string-db.org/network/679935.Alfi_3093PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_3094 protein networkhttps://string-db.org/network/679935.Alfi_3094PFAM: Inositol monophosphatase family.
Alfi_3095 protein networkhttps://string-db.org/network/679935.Alfi_3095Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
Alfi_3096 protein networkhttps://string-db.org/network/679935.Alfi_3096PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
Alfi_3097 protein networkhttps://string-db.org/network/679935.Alfi_3097PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal doma [...]
Alfi_3098 protein networkhttps://string-db.org/network/679935.Alfi_3098PFAM: Phosphorylase superfamily.
Alfi_3099 protein networkhttps://string-db.org/network/679935.Alfi_3099DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
Alfi_3100 protein networkhttps://string-db.org/network/679935.Alfi_3100DNA polymerase III epsilon subunit-like 3'-5' exonuclease; PFAM: Exonuclease.
Alfi_3101 protein networkhttps://string-db.org/network/679935.Alfi_3101Transcriptional regulator; PFAM: Receptor family ligand binding region; LysM domain.
rex protein networkhttps://string-db.org/network/679935.Alfi_3102AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
Alfi_3103 protein networkhttps://string-db.org/network/679935.Alfi_3103PFAM: FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase.
Alfi_3104 protein networkhttps://string-db.org/network/679935.Alfi_3104PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
Alfi_3105 protein networkhttps://string-db.org/network/679935.Alfi_3105Molecular chaperone of HSP90 family; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein.
Alfi_3106 protein networkhttps://string-db.org/network/679935.Alfi_3106PFAM: Nitroreductase family.
Alfi_3109 protein networkhttps://string-db.org/network/679935.Alfi_3109Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_3110 protein networkhttps://string-db.org/network/679935.Alfi_3110PFAM: Transposase IS116/IS110/IS902 family; Transposase.
Alfi_3111 protein networkhttps://string-db.org/network/679935.Alfi_3111PFAM: Protein of unknown function (DUF3408).
Alfi_3112 protein networkhttps://string-db.org/network/679935.Alfi_3112Hypothetical protein.
Alfi_3113 protein networkhttps://string-db.org/network/679935.Alfi_3113Transposase; PFAM: Integrase core domain.
Alfi_3114 protein networkhttps://string-db.org/network/679935.Alfi_3114Hypothetical protein.
Alfi_3115 protein networkhttps://string-db.org/network/679935.Alfi_3115PFAM: Bacterial mobilisation protein (MobC).
Alfi_3116 protein networkhttps://string-db.org/network/679935.Alfi_3116Hypothetical protein.
Alfi_3117 protein networkhttps://string-db.org/network/679935.Alfi_3117Hypothetical protein.
Alfi_3118 protein networkhttps://string-db.org/network/679935.Alfi_3118Hypothetical protein.
Alfi_3121 protein networkhttps://string-db.org/network/679935.Alfi_3121Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
Alfi_3122 protein networkhttps://string-db.org/network/679935.Alfi_3122PFAM: Protein of unknown function (DUF3575).
Alfi_3123 protein networkhttps://string-db.org/network/679935.Alfi_3123Hypothetical protein.
Alfi_3124 protein networkhttps://string-db.org/network/679935.Alfi_3124Hypothetical protein.
Alfi_3128 protein networkhttps://string-db.org/network/679935.Alfi_3128PFAM: Bacterial mobilisation protein (MobC).
Alfi_3130 protein networkhttps://string-db.org/network/679935.Alfi_3130PFAM: Protein of unknown function (DUF3408).
Alfi_3131 protein networkhttps://string-db.org/network/679935.Alfi_3131Hypothetical protein.
Alfi_3132 protein networkhttps://string-db.org/network/679935.Alfi_3132Hypothetical protein.
Alfi_3133 protein networkhttps://string-db.org/network/679935.Alfi_3133Hypothetical protein.
Alfi_3134 protein networkhttps://string-db.org/network/679935.Alfi_3134Hypothetical protein.
Alfi_3135 protein networkhttps://string-db.org/network/679935.Alfi_3135Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_3136 protein networkhttps://string-db.org/network/679935.Alfi_3136Hypothetical protein.
Alfi_3137 protein networkhttps://string-db.org/network/679935.Alfi_3137Hypothetical protein.
Alfi_3141 protein networkhttps://string-db.org/network/679935.Alfi_3141Transposase family protein; PFAM: Transposase DDE domain.
Alfi_3142 protein networkhttps://string-db.org/network/679935.Alfi_3142Galactose mutarotase-like enzyme; PFAM: Aldose 1-epimerase.
Alfi_3143 protein networkhttps://string-db.org/network/679935.Alfi_3143PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
Alfi_3144 protein networkhttps://string-db.org/network/679935.Alfi_3144PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc).
Alfi_3145 protein networkhttps://string-db.org/network/679935.Alfi_3145PFAM: Protein of unknown function (DUF2007).
Alfi_3146 protein networkhttps://string-db.org/network/679935.Alfi_3146PFAM: Gram-negative bacterial tonB protein.
Alfi_3147 protein networkhttps://string-db.org/network/679935.Alfi_3147PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase.
Alfi_3148 protein networkhttps://string-db.org/network/679935.Alfi_3148Putative membrane protein; PFAM: Domain of unknown function (DUF368).
Alfi_3149 protein networkhttps://string-db.org/network/679935.Alfi_3149PFAM: Protein of unknown function (DUF3276).
Alfi_3150 protein networkhttps://string-db.org/network/679935.Alfi_3150PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.
hisS protein networkhttps://string-db.org/network/679935.Alfi_3151PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase.
Alfi_3152 protein networkhttps://string-db.org/network/679935.Alfi_3152PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.
Alfi_3153 protein networkhttps://string-db.org/network/679935.Alfi_3153PFAM: Rubrerythrin.
Alfi_3154 protein networkhttps://string-db.org/network/679935.Alfi_3154PFAM: Bacterial capsule synthesis protein PGA_cap.
Alfi_3155 protein networkhttps://string-db.org/network/679935.Alfi_3155Putative permease; PFAM: EamA-like transporter family.
Alfi_3156 protein networkhttps://string-db.org/network/679935.Alfi_3156Hypothetical protein.
Alfi_3157 protein networkhttps://string-db.org/network/679935.Alfi_3157Hypothetical protein.
Alfi_3158 protein networkhttps://string-db.org/network/679935.Alfi_3158PFAM: Porin subfamily.
Alfi_3159 protein networkhttps://string-db.org/network/679935.Alfi_3159Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
Alfi_3160 protein networkhttps://string-db.org/network/679935.Alfi_3160Pyrimidine reductase, riboflavin biosynthesis; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region.
Alfi_3161 protein networkhttps://string-db.org/network/679935.Alfi_3161PFAM: Outer membrane efflux protein.
Alfi_3162 protein networkhttps://string-db.org/network/679935.Alfi_3162Multidrug resistance efflux pump.
Alfi_3163 protein networkhttps://string-db.org/network/679935.Alfi_3163ABC-type multidrug transport system, permease component.
Alfi_3164 protein networkhttps://string-db.org/network/679935.Alfi_3164ABC-type multidrug transport system, permease component.
Alfi_3165 protein networkhttps://string-db.org/network/679935.Alfi_3165Hypothetical protein.
Alfi_3166 protein networkhttps://string-db.org/network/679935.Alfi_3166Hypothetical protein.
Alfi_3167 protein networkhttps://string-db.org/network/679935.Alfi_3167Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
Alfi_3168 protein networkhttps://string-db.org/network/679935.Alfi_3168Putative regulator of cell autolysis; PFAM: Histidine kinase.
Alfi_3169 protein networkhttps://string-db.org/network/679935.Alfi_3169Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
Alfi_3170 protein networkhttps://string-db.org/network/679935.Alfi_3170MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.
Alfi_3171 protein networkhttps://string-db.org/network/679935.Alfi_3171N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain.
Alfi_3172 protein networkhttps://string-db.org/network/679935.Alfi_3172PFAM: Restriction endonuclease BglII.
Alfi_3173 protein networkhttps://string-db.org/network/679935.Alfi_3173PFAM: YhhN-like protein.
pheT protein networkhttps://string-db.org/network/679935.Alfi_3174phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthe [...]
Alfi_3175 protein networkhttps://string-db.org/network/679935.Alfi_3175Hypothetical protein.
trpB protein networkhttps://string-db.org/network/679935.Alfi_3176Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
Alfi_3177 protein networkhttps://string-db.org/network/679935.Alfi_3177Putative membrane protein; PFAM: EamA-like transporter family.
Alfi_3178 protein networkhttps://string-db.org/network/679935.Alfi_3178PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase.
Alfi_3179 protein networkhttps://string-db.org/network/679935.Alfi_3179PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
lepA protein networkhttps://string-db.org/network/679935.Alfi_3180GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
Alfi_3181 protein networkhttps://string-db.org/network/679935.Alfi_3181AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme.
Alfi_3183 protein networkhttps://string-db.org/network/679935.Alfi_3183Hypothetical protein.
Alfi_3184 protein networkhttps://string-db.org/network/679935.Alfi_3184Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
Alfi_3185 protein networkhttps://string-db.org/network/679935.Alfi_3185Hypothetical protein.
Alfi_3186 protein networkhttps://string-db.org/network/679935.Alfi_3186Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
Alfi_3187 protein networkhttps://string-db.org/network/679935.Alfi_3187Hypothetical protein.
Alfi_3188 protein networkhttps://string-db.org/network/679935.Alfi_3188Hypothetical protein.
Alfi_3189 protein networkhttps://string-db.org/network/679935.Alfi_3189Hypothetical protein.
Alfi_3190 protein networkhttps://string-db.org/network/679935.Alfi_3190Hypothetical protein.
Alfi_3191 protein networkhttps://string-db.org/network/679935.Alfi_3191Hypothetical protein.
rho protein networkhttps://string-db.org/network/679935.Alfi_3192Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
Alfi_3193 protein networkhttps://string-db.org/network/679935.Alfi_3193PFAM: S1/P1 Nuclease.
Alfi_3196 protein networkhttps://string-db.org/network/679935.Alfi_3196Hypothetical protein.
Alfi_3197 protein networkhttps://string-db.org/network/679935.Alfi_3197Hypothetical protein.
Alfi_3198 protein networkhttps://string-db.org/network/679935.Alfi_3198Hypothetical protein.
Alfi_3199 protein networkhttps://string-db.org/network/679935.Alfi_3199Hypothetical protein.
Alfi_3200 protein networkhttps://string-db.org/network/679935.Alfi_3200ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
Alfi_3201 protein networkhttps://string-db.org/network/679935.Alfi_3201Hypothetical protein.
Alfi_3202 protein networkhttps://string-db.org/network/679935.Alfi_3202Hypothetical protein.
Alfi_3203 protein networkhttps://string-db.org/network/679935.Alfi_3203Hypothetical protein.
Alfi_3204 protein networkhttps://string-db.org/network/679935.Alfi_3204Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
Alfi_3205 protein networkhttps://string-db.org/network/679935.Alfi_3205Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
Alfi_3206 protein networkhttps://string-db.org/network/679935.Alfi_3206PFAM: Protein of unknown function (DUF2023).
Alfi_3209 protein networkhttps://string-db.org/network/679935.Alfi_3209Hypothetical protein.
Alfi_3211 protein networkhttps://string-db.org/network/679935.Alfi_3211PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
Alfi_3212 protein networkhttps://string-db.org/network/679935.Alfi_3212Hypothetical protein.
Alfi_3213 protein networkhttps://string-db.org/network/679935.Alfi_3213Transposase; PFAM: Integrase core domain.
Alfi_3214 protein networkhttps://string-db.org/network/679935.Alfi_3214Hypothetical protein.
Alfi_3215 protein networkhttps://string-db.org/network/679935.Alfi_3215PFAM: Protein of unknown function (DUF3408).
Alfi_3216 protein networkhttps://string-db.org/network/679935.Alfi_3216Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
miaA protein networkhttps://string-db.org/network/679935.Alfi_3218tRNA isopentenyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6- [...]
Alfi_3219 protein networkhttps://string-db.org/network/679935.Alfi_3219PFAM: Plasmid pRiA4b ORF-3-like protein.
Alfi_3220 protein networkhttps://string-db.org/network/679935.Alfi_3220NAD-dependent aldehyde dehydrogenase; PFAM: Acyl-CoA reductase (LuxC).
Alfi_3221 protein networkhttps://string-db.org/network/679935.Alfi_3221Nitroreductase-like oxidoreductase; PFAM: Nitroreductase family.
Alfi_3223 protein networkhttps://string-db.org/network/679935.Alfi_3223Hypothetical protein; Manually curated; non-canonical start codon.
Alfi_3224 protein networkhttps://string-db.org/network/679935.Alfi_3224Hypothetical protein.
Alfi_3225 protein networkhttps://string-db.org/network/679935.Alfi_3225Hypothetical protein.
Alfi_3226 protein networkhttps://string-db.org/network/679935.Alfi_3226PFAM: Acyltransferase family.
Alfi_3227 protein networkhttps://string-db.org/network/679935.Alfi_3227Hypothetical protein.
Alfi_3228 protein networkhttps://string-db.org/network/679935.Alfi_3228Hypothetical protein.
Alfi_3229 protein networkhttps://string-db.org/network/679935.Alfi_3229Hypothetical protein.
Alfi_3230 protein networkhttps://string-db.org/network/679935.Alfi_3230Hypothetical protein.
Alfi_3231 protein networkhttps://string-db.org/network/679935.Alfi_3231Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
Alfi_3232 protein networkhttps://string-db.org/network/679935.Alfi_3232Hypothetical protein.
Alfi_3233 protein networkhttps://string-db.org/network/679935.Alfi_3233Hypothetical protein.
Alfi_3234 protein networkhttps://string-db.org/network/679935.Alfi_3234Flavodoxin.
Alfi_3235 protein networkhttps://string-db.org/network/679935.Alfi_3235PFAM: NADPH-dependent FMN reductase.
Alfi_3236 protein networkhttps://string-db.org/network/679935.Alfi_3236Hypothetical protein; PFAM: Cupin domain; Carboxymuconolactone decarboxylase family.
Alfi_3237 protein networkhttps://string-db.org/network/679935.Alfi_3237PFAM: Aldo/keto reductase family.
Alfi_3238 protein networkhttps://string-db.org/network/679935.Alfi_3238DNA-binding domain-containing protein, AraC-type.
gpmA protein networkhttps://string-db.org/network/679935.Alfi_3239Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
Alfi_3240 protein networkhttps://string-db.org/network/679935.Alfi_3240Lactate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
Alfi_3241 protein networkhttps://string-db.org/network/679935.Alfi_3241DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme; PFAM: DeoC/LacD family aldolase.
Alfi_3242 protein networkhttps://string-db.org/network/679935.Alfi_3242DNA-binding domain-containing protein, AraC-type.
Alfi_3243 protein networkhttps://string-db.org/network/679935.Alfi_3243PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
Alfi_3244 protein networkhttps://string-db.org/network/679935.Alfi_3244PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) famil [...]
Alfi_3245 protein networkhttps://string-db.org/network/679935.Alfi_3245PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
Alfi_3246 protein networkhttps://string-db.org/network/679935.Alfi_3246PFAM: Bacterial regulatory proteins, tetR family.
Alfi_3247 protein networkhttps://string-db.org/network/679935.Alfi_3247Hypothetical protein.
Alfi_3248 protein networkhttps://string-db.org/network/679935.Alfi_3248Hypothetical protein.
Alfi_3249 protein networkhttps://string-db.org/network/679935.Alfi_3249O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase.
metXA protein networkhttps://string-db.org/network/679935.Alfi_3250Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
Alfi_3251 protein networkhttps://string-db.org/network/679935.Alfi_3251PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase.
Alfi_3252 protein networkhttps://string-db.org/network/679935.Alfi_3252Hypothetical protein (Fib_succ_major); PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain.
Alfi_3253 protein networkhttps://string-db.org/network/679935.Alfi_3253Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
Alfi_3254 protein networkhttps://string-db.org/network/679935.Alfi_3254Hypothetical protein.
Alfi_3255 protein networkhttps://string-db.org/network/679935.Alfi_3255Hypothetical protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271).
Alfi_3256 protein networkhttps://string-db.org/network/679935.Alfi_3256PFAM: IgA Peptidase M64.
Alfi_3257 protein networkhttps://string-db.org/network/679935.Alfi_3257Hypothetical protein; PFAM: SigmaW regulon antibacterial.
Alfi_3258 protein networkhttps://string-db.org/network/679935.Alfi_3258Membrane-bound serine protease (ClpP class); PFAM: NfeD-like.
Alfi_3259 protein networkhttps://string-db.org/network/679935.Alfi_3259Hypothetical protein.
Alfi_3260 protein networkhttps://string-db.org/network/679935.Alfi_3260Trk-type K+ transport system, membrane component; PFAM: Cation transport protein.
Alfi_3261 protein networkhttps://string-db.org/network/679935.Alfi_3261Hypothetical protein.
Alfi_3262 protein networkhttps://string-db.org/network/679935.Alfi_3262MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO fami [...]
Alfi_3263 protein networkhttps://string-db.org/network/679935.Alfi_3263ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
Alfi_3264 protein networkhttps://string-db.org/network/679935.Alfi_3264PFAM: Predicted permease YjgP/YjgQ family.
ribBA protein networkhttps://string-db.org/network/679935.Alfi_32653,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GT [...]
fmt protein networkhttps://string-db.org/network/679935.Alfi_3266methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
Alfi_3267 protein networkhttps://string-db.org/network/679935.Alfi_3267Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against [...]
Alfi_3268 protein networkhttps://string-db.org/network/679935.Alfi_3268Hypothetical protein.
Alfi_3269 protein networkhttps://string-db.org/network/679935.Alfi_32692-oxoacid:ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase.
Alfi_3270 protein networkhttps://string-db.org/network/679935.Alfi_32702-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
Alfi_3271 protein networkhttps://string-db.org/network/679935.Alfi_32712-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: domain.
Alfi_3272 protein networkhttps://string-db.org/network/679935.Alfi_3272Ferredoxin.
Alfi_3273 protein networkhttps://string-db.org/network/679935.Alfi_3273PFAM: Protein of unknown function (DUF1015).
Alfi_3274 protein networkhttps://string-db.org/network/679935.Alfi_3274Phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
serC protein networkhttps://string-db.org/network/679935.Alfi_3275Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreon [...]
Alfi_3276 protein networkhttps://string-db.org/network/679935.Alfi_3276TIGR00255 family protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein.
gmk protein networkhttps://string-db.org/network/679935.Alfi_3277Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
nadD protein networkhttps://string-db.org/network/679935.Alfi_3278Nicotinate/nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
ddl protein networkhttps://string-db.org/network/679935.Alfi_3279ATP-grasp enzyme, D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
Alfi_3280 protein networkhttps://string-db.org/network/679935.Alfi_3280PFAM: Protein of unknown function (DUF3109).
Alfi_3281 protein networkhttps://string-db.org/network/679935.Alfi_3281Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; LysM domain.
Alfi_3282 protein networkhttps://string-db.org/network/679935.Alfi_3282PFAM: Inosine-uridine preferring nucleoside hydrolase.
Alfi_3283 protein networkhttps://string-db.org/network/679935.Alfi_3283Putative glucose uptake permease; PFAM: Fatty acid elongase 3-ketoacyl-CoA synthase 1.
rbsK protein networkhttps://string-db.org/network/679935.Alfi_3284Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histi [...]
Alfi_3285 protein networkhttps://string-db.org/network/679935.Alfi_3285Hypothetical protein.
Alfi_3286 protein networkhttps://string-db.org/network/679935.Alfi_3286PFAM: Bacterial regulatory proteins, lacI family; family.
proC protein networkhttps://string-db.org/network/679935.Alfi_3287Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
Alfi_3288 protein networkhttps://string-db.org/network/679935.Alfi_3288Putative enzyme with a TIM-barrel fold; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
Alfi_3289 protein networkhttps://string-db.org/network/679935.Alfi_3289Hypothetical protein.
Alfi_3290 protein networkhttps://string-db.org/network/679935.Alfi_3290Dipeptidase; PFAM: Peptidase family C69.
Alfi_3291 protein networkhttps://string-db.org/network/679935.Alfi_3291Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase.
Alfi_3292 protein networkhttps://string-db.org/network/679935.Alfi_3292Hypothetical protein.
truA protein networkhttps://string-db.org/network/679935.Alfi_3293Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
Alfi_3294 protein networkhttps://string-db.org/network/679935.Alfi_3294Aspartate ammonia-lyase; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase.
Alfi_3295 protein networkhttps://string-db.org/network/679935.Alfi_3295PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; Belongs to the DapB family.
Alfi_3296 protein networkhttps://string-db.org/network/679935.Alfi_3296PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
Alfi_3297 protein networkhttps://string-db.org/network/679935.Alfi_3297PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family.
Alfi_3298 protein networkhttps://string-db.org/network/679935.Alfi_3298Excinuclease ATPase subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
Alfi_3299 protein networkhttps://string-db.org/network/679935.Alfi_3299Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
Alfi_3300 protein networkhttps://string-db.org/network/679935.Alfi_3300Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family.
Alfi_3301 protein networkhttps://string-db.org/network/679935.Alfi_3301PFAM: O-methyltransferase.
Alfi_3302 protein networkhttps://string-db.org/network/679935.Alfi_3302Putative pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase domain.
Alfi_3303 protein networkhttps://string-db.org/network/679935.Alfi_3303Hypothetical protein.
Alfi_3304 protein networkhttps://string-db.org/network/679935.Alfi_3304Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomut [...]